Csor.00g020540.m01 (mRNA) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTGAGTTCGCCTTGCAAGCTCTCTTTGAAACTGCTCAAAAGATTTCGACTTCCATTCAAACCCATCTCTCTAATCTTCTTCCGCAGCCGCCCCACCATTCACGGCCCTACCATAAACCCCTTTCTTCCCCTTCTTCATCGTCATATGCTACTCCTTCATACACTGATGCCACTTATTTGCAATCTGATGAAGTTTTCAAAAAGGTAATTTTAATTTTTTTTTCACTTCTTTTCTTCTCTAGCCTGCGATTGAGCTGTTATGTTCAAATTTTGGTTGCTGTAGCTGTATTTTTCGTGAATTGACTCGTATGCTCTGTAAGTGTTTGATTAAAGTCCTGAAAGAAAAGTAATCTGCTTTTCATTTGTCTTTTTGAGATTGTTGAATTTGTGATTCATAGCATGTGCATCTAATTTCTGAAATCTTGAGGCCATTTTGGGTTGTGTTTTTACTTGGTAGCTTCTTTAATTTTATTTTCACTTCTTTCCTTCTCTTGCCTGCGATTGAGCTGTTATGTTCAAATTTTGGTTGCCGTAGCTGTATTTTTCGTGAATTGACTCGTATGCTCTGTAAGTGTTTGATATAAATCCTGAAAGAAAAGTAATCTGCTTTTCATTTGTCTTTTTGAGATTGTTGAATTTGTGATTCATAGCATGTGCATCTAATTTCTGAAATCTTGAGGCCATTTTGGGTTGCGTGTTTTTACTTGGTAGCTTCTTGAGAATTTGTCCCAGGTTAAGAAATGGCTTTTGTATCAAATAAAACAGTTTAATGGATTTCTTGAACTGAATCAGAGAAAACAATAGGATTTAATATCTCATGATCACAGCTAAGCTGATACCAATTTCCGTTGTAATCTAAAAATGGAGCTTGGGTTGGTATGAAAAAAGACTGCTTGAAGAAACAAAATGAAATCCATCTACGCAAAGTTACTTACTATTGAGAAAATTTTGAACTCATTCAGTTGCAATGATCATTCGGCTGTGTTATGTATCAGCTTCTTTGTGTAATTCCTATAGAGTTGATTTTGAAATTCTCATACTGGTTTGGTTTTGATTTGAAAATTTTTATTGAGGAAAGCCTGCTGCACCTGTAACTAAGGAAGCGCTTGGAAGGGCTACGTGGACTTTTCTTCACATCCTTGCTGCTCAGGTTTTCTCAGCAATGTTACCTTTTTAATTTTGTTCTCCACCATTGACGTTGAAATCTCTATTTATATGTGTATATATAAACACGCAATGCAGCCCAAGTATAATTATCTAGTTCCCCAAGAACCTTGAGGAATTATTGGATCAACTCCTTTGTCCTCATCCTTTCAAATCCACAGCTAGTTTTTTTATTTAAAAAAAAATGGTAAAGGCTTTGATTTGGGAAATTTGGTTATGAGGACATACAAGAACCGTCAAGGATAACGTTGAAAAAGGACAGTGGTTTTTGAAAACCAGTGCGATTTTTGGCCTCTTTATGGTGTAACTTTGGAGAGAACCCTGTAATTCTTCCTTCCTTCATGCTCTTCTCAGACTGCAGCTGTTTTTGTAATCTCTTTCGCTTTCTCTCTTCCCCTTTTTTGTGTATTTTTCTTTATAAATTAAATGTCTTTCTCTAATTAGAAGAAACAACCTCCCACCCCATTCAAGCATGAAGAGATAACAATTCAATATATATTCCATGCCTTCCATTCAAATCTATTGAATTGTTGGCCTTTAATTTTGTCAGTACCCAGATCACCCGACGAGGCAGCAGAAGAAGGATGTAAAAGAATTGGTAGGGTATCCTTTTTAAACCATGTGTAGGTCTCTTGTTCCACTCTATTAGCCTTTTCAAAGATGTAAAGCTTCATTTTGAGTGCTATGATTAATTTTGTCTTTAACTTAGACAAACGGATCCTTGAGCTTGTGATAAAGCATGGACAATGGCTATATGTAATAACTTGTGTTGTGTGTGCAGATGGCAATATTATCTCGCATGTATCCCTGTGGAGAATGTGCAGACCACTTTAAAGAAGTTTTGAGGTATGTCGTTTATCCTCTCTTCAAATTGAGTATGCCTGGAAGCCCTTCCACTAGACCTTAATATTTGTTCATGTCTAAAAATACTATGACCTTTTATAATCCTTTTAAGAAAATGGAAAGGGGACTAATAATAATGTAAACTTCGTTGTTTAAGGATATAATCCTATGGATAAAATGTAAACTCATATCTTGTTCCTTTTCTTTTACCCTTTTTTTCAACATTTTATGTATCATTGAAGTAAATGGTTTTGTTCAGAAAAAAATGTTTTATAAATGAGTACTAACGTAACATCCCTAGTAGATATTGTCTGCTTTGATCCGTTACATATCGCTCACAGTCTCAAGATTTTTAAAACGCGTCTATTAGGAAGAGGTTTCCATACCCTTATAAGAAATGTTTTGTCTTCTCTCCAACCAACGTGGCTTCTCAAAATCCACCCTCCTTGGGGGCTAGCGTCCTTTCTAACACACCGTCTGGTGTTTGGCTCTGATACCATTTGTAACATCCCAAACCCTCACTGCTAGTAGATATTGTCCGCTTTGGCCCGTTAAGTATTGTTGTTAGTTTCACGATTTTTAAAACGCGTCTACTAGGGAGAGGTTTTCACATCCTTATAAAAAATGTTTCGCTCCCCTCTTCAATCGATGTAAGATCTCACAATAATCTTATTTTTTTCCCCAAAATCTTCGAGTAGTAATTTTTTGGTGATTGTTTTACAGAGCAAACCCTGTGGAGGCAGGATCTCATGCTGAGTTCTCCGGATGGCTGTGCCGTGTACATAATGTTGTCAATCGAAGGTTATTTCTCAAACTTCGTATTAAATGTAACTTCTGATTCATTTCATCGGTTCCAAACTAATTAATTTGTCTTCAACCGTATAATTTCTATATCATAACTCTTTAGGTTTCACTTAGTTGACTCACAAGACATATTTTGTTTGAACCAGAGTGTTTTAAATCGTATTAATTTGGTTATCTCCATTTCGATGGTTACTACTGCAGTCTCGGAAAACCAAAATTCCCATGCGAACGTGTCGACGCAAGATGGGGCAAATTGGAATGCGAGCAACGTGCCTGTGATGTGCTTGGAAGCTTGCCAAATTTTGGGGACGAAGATAGACGTTGA ATGCCTGAGTTCGCCTTGCAAGCTCTCTTTGAAACTGCTCAAAAGATTTCGACTTCCATTCAAACCCATCTCTCTAATCTTCTTCCGCAGCCGCCCCACCATTCACGGCCCTACCATAAACCCCTTTCTTCCCCTTCTTCATCGTCATATGCTACTCCTTCATACACTGATGCCACTTATTTGCAATCTGATGAAGTTTTCAAAAAGCCTGCTGCACCTGTAACTAAGGAAGCGCTTGGAAGGGCTACGTGGACTTTTCTTCACATCCTTGCTGCTCAGTACCCAGATCACCCGACGAGGCAGCAGAAGAAGGATGTAAAAGAATTGATGGCAATATTATCTCGCATGTATCCCTGTGGAGAATGTGCAGACCACTTTAAAGAAGTTTTGAGAGCAAACCCTGTGGAGGCAGGATCTCATGCTGAGTTCTCCGGATGGCTGTGCCGTGTACATAATGTTGTCAATCGAAGTCTCGGAAAACCAAAATTCCCATGCGAACGTGTCGACGCAAGATGGGGCAAATTGGAATGCGAGCAACGTGCCTGTGATGTGCTTGGAAGCTTGCCAAATTTTGGGGACGAAGATAGACGTTGA ATGCCTGAGTTCGCCTTGCAAGCTCTCTTTGAAACTGCTCAAAAGATTTCGACTTCCATTCAAACCCATCTCTCTAATCTTCTTCCGCAGCCGCCCCACCATTCACGGCCCTACCATAAACCCCTTTCTTCCCCTTCTTCATCGTCATATGCTACTCCTTCATACACTGATGCCACTTATTTGCAATCTGATGAAGTTTTCAAAAAGCCTGCTGCACCTGTAACTAAGGAAGCGCTTGGAAGGGCTACGTGGACTTTTCTTCACATCCTTGCTGCTCAGTACCCAGATCACCCGACGAGGCAGCAGAAGAAGGATGTAAAAGAATTGATGGCAATATTATCTCGCATGTATCCCTGTGGAGAATGTGCAGACCACTTTAAAGAAGTTTTGAGAGCAAACCCTGTGGAGGCAGGATCTCATGCTGAGTTCTCCGGATGGCTGTGCCGTGTACATAATGTTGTCAATCGAAGTCTCGGAAAACCAAAATTCCCATGCGAACGTGTCGACGCAAGATGGGGCAAATTGGAATGCGAGCAACGTGCCTGTGATGTGCTTGGAAGCTTGCCAAATTTTGGGGACGAAGATAGACGTTGA MPEFALQALFETAQKISTSIQTHLSNLLPQPPHHSRPYHKPLSSPSSSSYATPSYTDATYLQSDEVFKKPAAPVTKEALGRATWTFLHILAAQYPDHPTRQQKKDVKELMAILSRMYPCGECADHFKEVLRANPVEAGSHAEFSGWLCRVHNVVNRSLGKPKFPCERVDARWGKLECEQRACDVLGSLPNFGDEDRR Homology
BLAST of Csor.00g020540.m01 vs. ExPASy Swiss-Prot
Match: Q8GXX0 (FAD-linked sulfhydryl oxidase ERV1 OS=Arabidopsis thaliana OX=3702 GN=ERV1 PE=1 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 4.9e-60 Identity = 117/194 (60.31%), Postives = 137/194 (70.62%), Query Frame = 0
BLAST of Csor.00g020540.m01 vs. ExPASy Swiss-Prot
Match: Q10Q80 (FAD-linked sulfhydryl oxidase ERV1 OS=Oryza sativa subsp. japonica OX=39947 GN=ERV1 PE=2 SV=2) HSP 1 Score: 202.6 bits (514), Expect = 4.1e-51 Identity = 99/156 (63.46%), Postives = 119/156 (76.28%), Query Frame = 0
BLAST of Csor.00g020540.m01 vs. ExPASy Swiss-Prot
Match: P56213 (FAD-linked sulfhydryl oxidase ALR OS=Mus musculus OX=10090 GN=Gfer PE=1 SV=2) HSP 1 Score: 124.0 bits (310), Expect = 1.9e-27 Identity = 52/111 (46.85%), Postives = 70/111 (63.06%), Query Frame = 0
BLAST of Csor.00g020540.m01 vs. ExPASy Swiss-Prot
Match: Q63042 (FAD-linked sulfhydryl oxidase ALR OS=Rattus norvegicus OX=10116 GN=Gfer PE=1 SV=2) HSP 1 Score: 121.3 bits (303), Expect = 1.2e-26 Identity = 51/111 (45.95%), Postives = 70/111 (63.06%), Query Frame = 0
BLAST of Csor.00g020540.m01 vs. ExPASy Swiss-Prot
Match: P55789 (FAD-linked sulfhydryl oxidase ALR OS=Homo sapiens OX=9606 GN=GFER PE=1 SV=2) HSP 1 Score: 113.6 bits (283), Expect = 2.5e-24 Identity = 50/114 (43.86%), Postives = 71/114 (62.28%), Query Frame = 0
BLAST of Csor.00g020540.m01 vs. NCBI nr
Match: XP_022942504.1 (FAD-linked sulfhydryl oxidase ERV1 [Cucurbita moschata] >KAG6600291.1 FAD-linked sulfhydryl oxidase ERV1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 409 bits (1052), Expect = 2.25e-144 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of Csor.00g020540.m01 vs. NCBI nr
Match: XP_023540323.1 (FAD-linked sulfhydryl oxidase ERV1 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 407 bits (1047), Expect = 1.30e-143 Identity = 196/197 (99.49%), Postives = 196/197 (99.49%), Query Frame = 0
BLAST of Csor.00g020540.m01 vs. NCBI nr
Match: KAG7030951.1 (FAD-linked sulfhydryl oxidase ERV1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 407 bits (1047), Expect = 1.30e-143 Identity = 196/197 (99.49%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of Csor.00g020540.m01 vs. NCBI nr
Match: XP_022984591.1 (FAD-linked sulfhydryl oxidase ERV1 [Cucurbita maxima]) HSP 1 Score: 402 bits (1032), Expect = 2.52e-141 Identity = 193/197 (97.97%), Postives = 194/197 (98.48%), Query Frame = 0
BLAST of Csor.00g020540.m01 vs. NCBI nr
Match: XP_022149226.1 (FAD-linked sulfhydryl oxidase ERV1 [Momordica charantia] >XP_022149227.1 FAD-linked sulfhydryl oxidase ERV1 [Momordica charantia]) HSP 1 Score: 365 bits (936), Expect = 1.10e-126 Identity = 177/197 (89.85%), Postives = 184/197 (93.40%), Query Frame = 0
BLAST of Csor.00g020540.m01 vs. ExPASy TrEMBL
Match: A0A6J1FRI7 (Sulfhydryl oxidase OS=Cucurbita moschata OX=3662 GN=LOC111447518 PE=4 SV=1) HSP 1 Score: 409 bits (1052), Expect = 1.09e-144 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of Csor.00g020540.m01 vs. ExPASy TrEMBL
Match: A0A6J1J5P6 (Sulfhydryl oxidase OS=Cucurbita maxima OX=3661 GN=LOC111482836 PE=4 SV=1) HSP 1 Score: 402 bits (1032), Expect = 1.22e-141 Identity = 193/197 (97.97%), Postives = 194/197 (98.48%), Query Frame = 0
BLAST of Csor.00g020540.m01 vs. ExPASy TrEMBL
Match: A0A6J1D7D0 (Sulfhydryl oxidase OS=Momordica charantia OX=3673 GN=LOC111017699 PE=4 SV=1) HSP 1 Score: 365 bits (936), Expect = 5.30e-127 Identity = 177/197 (89.85%), Postives = 184/197 (93.40%), Query Frame = 0
BLAST of Csor.00g020540.m01 vs. ExPASy TrEMBL
Match: A0A0A0KY47 (Sulfhydryl oxidase OS=Cucumis sativus OX=3659 GN=Csa_4G000950 PE=4 SV=1) HSP 1 Score: 337 bits (864), Expect = 5.00e-116 Identity = 165/196 (84.18%), Postives = 173/196 (88.27%), Query Frame = 0
BLAST of Csor.00g020540.m01 vs. ExPASy TrEMBL
Match: A0A1S3BYG8 (Sulfhydryl oxidase OS=Cucumis melo OX=3656 GN=LOC103494800 PE=4 SV=1) HSP 1 Score: 335 bits (859), Expect = 2.89e-115 Identity = 162/197 (82.23%), Postives = 173/197 (87.82%), Query Frame = 0
BLAST of Csor.00g020540.m01 vs. TAIR 10
Match: AT1G49880.1 (Erv1/Alr family protein ) HSP 1 Score: 232.3 bits (591), Expect = 3.4e-61 Identity = 117/194 (60.31%), Postives = 137/194 (70.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following terminal feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following internal feature(s) are a part of this mRNA:
The following initial feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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