CsaV3_7G024010.1 (mRNA) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTCTTCTTCTCCTACTTACTTGGTACTTAATAATGATTAGTTACCAGGGTCTGTTTTCTATAAAAGTAACTTTTAACTTGGCTTTGATTCAAGCAACCCTCTTGTATTGCCCATTAGATATAAGCAAGCATTTTACAACTTTTAATGAAAATTTCTAGGATTGATGTTTGGTTGTATACGTTTGACTTGATGCATGAGAGAATTAATCTGTTCTGATTGACAAGTGGTTAATGGCTTCTTTTGGGCTAGAAAGCCTGTTGTTGTTAATAATGATGGAGAAGCGCGTAAATCGACATCACTTGGTGTAAGAGATTCCTTCATTGTTACTATCTTATGTTATTTCCATTATCTACTAGCTGTTGATCAGTCTGTAACTTGTTCATATTATTTTCATGAATTTTTGCTATTGAATTCTTGGATTACATATATTATTGTGCCTACTTGCAGATTATTCCCTTGGGAACAGGTTCGGATTTTGCAAGAGCATTTGGTTGGTAAGTGCACATTACTGCATTGTGTTTTTGTACGATGTGAGACTTTCAATTATCACTTCCTCCATGGGGTTAAGCAAACTTGGTTAACATTCTTTTAATTAGGAATAACAATCCTTTTGAAGCTGTGGACCATATAGCCAAAGGTATCCTTGTTTCACTCTTTTGTCTTCCCCTCTAATTTTTCTGTCGATGAAGTACTGTAAATGGCTCTGTTTGTTTACACAAACATTGCATTACCATTGGTAGTTCATGTAAGATATTCTGCTGGGTTGAGGAACCGAATTGATGTTGAAGTTGTCAATGAAGATAATGGGGAGAATCATTACTTTACAAATGTTGCAGACATTCATTTGTAAGGTTAATCTAAACAGTATCATTGATGCTAACCGACAAACTATGCTAAGTCAAGACATCTAATTATCTTATTGCATGGATCTTTTTGCAGAAGTGCAAAGGCTGGTTCTTATGCTGCTAGATACAAGAAATTTGGAAACTTATGCTATGTGATTGGTGCTTTGCAAGGCTTTATGGGACACCAAATTAGAGATTTTAAGACTAAGGTCAGCGTATAGAAAGAAACTCTAGAATTTTAAATTTATTGTATGAAATAATTGTGGTGTGTGCCTTTGATAGAACCCGAATATATTGAATATAAAAAATAATAGAAATAAACAATAAATCAAGTTATTCGAGGTACTTGGATCCTCCCTTCTTGAGATCACAATCTCAAGCCCTAAAACCCAAATATTGCTTCTCTTCTCCATTCCCCTATCCCTCTATTTATAACCAAATATAACCCACTCCCTAACTATTTATTGTTATGCCCTCAATACCCAAATAACCCCTAATACCGATCCTATTCGTCTCAAGGTGGTTTCAAAATGTAGACCATTTTGGAGGGGGCGGTGACTGCATTTTTACCATCTTTATTTAATTTCATCTATGTAGAATGCCATAACTCACAGGTTGATGACGGTGAATGGGAGCTGTATCCACAAGTAACTGCTCTATGCATTGGAAATGCTAAATACTTTGGCGGTGGTATGAAAATTGTGCCAAATGCCGATCCTTCCAACAGGAGTCTAGAGGTATAATTCGTTTCTGTGGGATTTTATTTGATCACTTTTTCCTTCCTTGTCTTCTTAACTATGTGATGCTTTTCTTTGCAGGTAGTAATTCTTCAGGATTTCAAGTGGTATGACTTTATTCTGAATTTACACAAAATATACAATGGGACATATTTGACGGTGAAAAACGTAACATCAAGAAGGTTAGTCATCTCTTTAAAAATTATAATGTGCCTAGATTTTCCATTTTGTATTTCAATTTTCTCTCTCCAACGGTCTGTTTTATGTTGGAGACTTGTGGAAGCAGAGGTGAAGAAACTATAATTGAACTGGATTTGCATGGAGCATTGTGATTTTCATTTCTGTCAAGTTTTTGCTTGAGAAAAACTTACACTCAAACTTATATGGAGATGCTTTATTTACCTAGCAGAGAAGCCCTAAGAAAAGTAATATTGTTAAACCTTCTTACTTCTGGCATTCTGATGTATCCTCAACCAAAATTAGAAAGTTATATGATTATCCTTTTTTCCTTGTTAAATCTTTGTCAACGTTGATGAACTCAATTAATCGATATCAATGTAACTCATCCATGGTTGAACATATGATTGAGCATGATTTCACATTTCAGCTCCACCTCATTAAAATTCATTGTTTGGCAATGATGCCCTTTTCTCAATCAAAACTTCCTATTTCTGCTTCTGAGCTTGTTCGTCTGCAATGCAACTATCATCAGTTTATTGTTTTGTTGTTCAAGCAGCGTTCGTTCGATCGAAGTGGAAGAAGTTTCTTGCAGCGGCAGCATATATGTTCAATCTGATGGGGAACACTTGGGGTTTCTTCCAAGGAAATTCCATATTCTACCAGCTGCCATTGAAATGATATGCTGA ATGTCTTCTTCTTCTCCTACTTACTTGATTATTCCCTTGGGAACAGGTTCGGATTTTGCAAGAGCATTTGGTTGGAATAACAATCCTTTTGAAGCTGTGGACCATATAGCCAAAGTTCATGTAAGATATTCTGCTGGGTTGAGGAACCGAATTGATGTTGAAGTTGTCAATGAAGATAATGGGGAGAATCATTACTTTACAAATGTTGCAGACATTCATTTAAGTGCAAAGGCTGGTTCTTATGCTGCTAGATACAAGAAATTTGGAAACTTATGCTATGTGATTGGTGCTTTGCAAGGCTTTATGGGACACCAAATTAGAGATTTTAAGACTAAGGTTGATGACGGTGAATGGGAGCTGTATCCACAAGTAACTGCTCTATGCATTGGAAATGCTAAATACTTTGGCGGTGGTATGAAAATTGTGCCAAATGCCGATCCTTCCAACAGGAGTCTAGAGGTAGTAATTCTTCAGGATTTCAAGTGGTATGACTTTATTCTGAATTTACACAAAATATACAATGGGACATATTTGACGGTGAAAAACGTAACATCAAGAAGCGTTCGTTCGATCGAAGTGGAAGAAGTTTCTTGCAGCGGCAGCATATATGTTCAATCTGATGGGGAACACTTGGGGTTTCTTCCAAGGAAATTCCATATTCTACCAGCTGCCATTGAAATGATATGCTGA ATGTCTTCTTCTTCTCCTACTTACTTGATTATTCCCTTGGGAACAGGTTCGGATTTTGCAAGAGCATTTGGTTGGAATAACAATCCTTTTGAAGCTGTGGACCATATAGCCAAAGTTCATGTAAGATATTCTGCTGGGTTGAGGAACCGAATTGATGTTGAAGTTGTCAATGAAGATAATGGGGAGAATCATTACTTTACAAATGTTGCAGACATTCATTTAAGTGCAAAGGCTGGTTCTTATGCTGCTAGATACAAGAAATTTGGAAACTTATGCTATGTGATTGGTGCTTTGCAAGGCTTTATGGGACACCAAATTAGAGATTTTAAGACTAAGGTTGATGACGGTGAATGGGAGCTGTATCCACAAGTAACTGCTCTATGCATTGGAAATGCTAAATACTTTGGCGGTGGTATGAAAATTGTGCCAAATGCCGATCCTTCCAACAGGAGTCTAGAGGTAGTAATTCTTCAGGATTTCAAGTGGTATGACTTTATTCTGAATTTACACAAAATATACAATGGGACATATTTGACGGTGAAAAACGTAACATCAAGAAGCGTTCGTTCGATCGAAGTGGAAGAAGTTTCTTGCAGCGGCAGCATATATGTTCAATCTGATGGGGAACACTTGGGGTTTCTTCCAAGGAAATTCCATATTCTACCAGCTGCCATTGAAATGATATGCTGA MSSSSPTYLIIPLGTGSDFARAFGWNNNPFEAVDHIAKVHVRYSAGLRNRIDVEVVNEDNGENHYFTNVADIHLSAKAGSYAARYKKFGNLCYVIGALQGFMGHQIRDFKTKVDDGEWELYPQVTALCIGNAKYFGGGMKIVPNADPSNRSLEVVILQDFKWYDFILNLHKIYNGTYLTVKNVTSRSVRSIEVEEVSCSGSIYVQSDGEHLGFLPRKFHILPAAIEMIC* Homology
BLAST of CsaV3_7G024010.1 vs. NCBI nr
Match: KAE8646157.1 (hypothetical protein Csa_016462 [Cucumis sativus]) HSP 1 Score: 480.7 bits (1236), Expect = 7.0e-132 Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0
BLAST of CsaV3_7G024010.1 vs. NCBI nr
Match: XP_031745081.1 (sphingoid long-chain bases kinase 2, mitochondrial [Cucumis sativus]) HSP 1 Score: 464.2 bits (1193), Expect = 6.8e-127 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0
BLAST of CsaV3_7G024010.1 vs. NCBI nr
Match: XP_031743330.1 (sphingoid long-chain bases kinase 2, mitochondrial [Cucumis sativus] >KAE8646552.1 hypothetical protein Csa_005226 [Cucumis sativus]) HSP 1 Score: 417.9 bits (1073), Expect = 5.6e-113 Identity = 202/220 (91.82%), Postives = 204/220 (92.73%), Query Frame = 0
BLAST of CsaV3_7G024010.1 vs. NCBI nr
Match: XP_008458171.1 (PREDICTED: sphingoid long-chain bases kinase 2, mitochondrial [Cucumis melo] >TYK03040.1 sphingoid long-chain bases kinase 2 [Cucumis melo var. makuwa]) HSP 1 Score: 417.5 bits (1072), Expect = 7.3e-113 Identity = 201/220 (91.36%), Postives = 204/220 (92.73%), Query Frame = 0
BLAST of CsaV3_7G024010.1 vs. NCBI nr
Match: XP_038876180.1 (sphingoid long-chain bases kinase 2, mitochondrial [Benincasa hispida]) HSP 1 Score: 404.1 bits (1037), Expect = 8.3e-109 Identity = 196/220 (89.09%), Postives = 201/220 (91.36%), Query Frame = 0
BLAST of CsaV3_7G024010.1 vs. ExPASy Swiss-Prot
Match: O82359 (Sphingoid long-chain bases kinase 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=LCKB2 PE=2 SV=1) HSP 1 Score: 340.5 bits (872), Expect = 1.5e-92 Identity = 157/227 (69.16%), Postives = 191/227 (84.14%), Query Frame = 0
BLAST of CsaV3_7G024010.1 vs. ExPASy Swiss-Prot
Match: P9WP28 (Diacylglycerol kinase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=dagK PE=1 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 2.0e-17 Identity = 65/221 (29.41%), Postives = 103/221 (46.61%), Query Frame = 0
BLAST of CsaV3_7G024010.1 vs. ExPASy Swiss-Prot
Match: P9WP29 (Diacylglycerol kinase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=dagK PE=1 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 2.0e-17 Identity = 65/221 (29.41%), Postives = 103/221 (46.61%), Query Frame = 0
BLAST of CsaV3_7G024010.1 vs. ExPASy Swiss-Prot
Match: B2FKL6 (Probable lipid kinase YegS-like OS=Stenotrophomonas maltophilia (strain K279a) OX=522373 GN=Smlt4314 PE=3 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 3.3e-07 Identity = 53/229 (23.14%), Postives = 94/229 (41.05%), Query Frame = 0
BLAST of CsaV3_7G024010.1 vs. ExPASy Swiss-Prot
Match: Q0VSB2 (Probable lipid kinase YegS-like OS=Alcanivorax borkumensis (strain ATCC 700651 / DSM 11573 / NCIMB 13689 / SK2) OX=393595 GN=ABO_0488 PE=3 SV=2) HSP 1 Score: 56.6 bits (135), Expect = 4.3e-07 Identity = 44/150 (29.33%), Postives = 66/150 (44.00%), Query Frame = 0
BLAST of CsaV3_7G024010.1 vs. ExPASy TrEMBL
Match: A0A0A0K3Y3 (DAGKc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G280850 PE=4 SV=1) HSP 1 Score: 464.2 bits (1193), Expect = 3.3e-127 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0
BLAST of CsaV3_7G024010.1 vs. ExPASy TrEMBL
Match: A0A5D3BVA2 (Sphingoid long-chain bases kinase 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G001350 PE=4 SV=1) HSP 1 Score: 417.5 bits (1072), Expect = 3.5e-113 Identity = 201/220 (91.36%), Postives = 204/220 (92.73%), Query Frame = 0
BLAST of CsaV3_7G024010.1 vs. ExPASy TrEMBL
Match: A0A1S3C7U6 (sphingoid long-chain bases kinase 2, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103497689 PE=4 SV=1) HSP 1 Score: 417.5 bits (1072), Expect = 3.5e-113 Identity = 201/220 (91.36%), Postives = 204/220 (92.73%), Query Frame = 0
BLAST of CsaV3_7G024010.1 vs. ExPASy TrEMBL
Match: A0A6J1HNB5 (sphingoid long-chain bases kinase 2, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111464490 PE=4 SV=1) HSP 1 Score: 393.7 bits (1010), Expect = 5.4e-106 Identity = 187/220 (85.00%), Postives = 202/220 (91.82%), Query Frame = 0
BLAST of CsaV3_7G024010.1 vs. ExPASy TrEMBL
Match: A0A6J1KFE4 (sphingoid long-chain bases kinase 2, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111494546 PE=4 SV=1) HSP 1 Score: 390.2 bits (1001), Expect = 6.0e-105 Identity = 185/220 (84.09%), Postives = 201/220 (91.36%), Query Frame = 0
BLAST of CsaV3_7G024010.1 vs. TAIR 10
Match: AT2G46090.1 (Diacylglycerol kinase family protein ) HSP 1 Score: 340.5 bits (872), Expect = 1.0e-93 Identity = 157/227 (69.16%), Postives = 191/227 (84.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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