CsaV3_6G048400.1 (mRNA) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G048400.1
TypemRNA
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 28393881 .. 28394939 (+)
Sequence length714
RNA-Seq ExpressionCsaV3_6G048400.1
SyntenyCsaV3_6G048400.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGGATGGGCAATGCAGAGGGAGAAAGAGCGAGAACGACGACGTATAAGGGACAGAGAAAGAAGATCGTCAATGAGCATTGAACAGAGAGAGAGGCATCTCGCAAGACGTCGTCGAAACTACCAAATACGAAGATTGAAATATCGAAATGGGAAAACCACAAATCCAAGCTTTTCTGGAACAAATTCATTTAAGGCGGTCTCAGAAACTTCCATTGCAGAGCTTGATCTGCAACAAAATGGGCTTATGCTCGTCGGTTTCAATCACGAACAAGAATCCTTAAATCCAGATTCCATAACGTCTTCCAGTAAGATCTGTTTTTTGAAGATACCAATATGGTGAGATGATTTTCTCTTGAGTTAATTTTCTTTCGGAATTTAATGAATAGGTTCTGAAATATTGGACCCAAGAGCTGAAATTCTCCAAGGGAGGGTACGTTTGAGTCATATTCGACGACTTGCACGTTCAATTGGGATTCACCAAATGTTTTCACAAGTAGAATCAACTTCCAATTGTAAGTCTGAGGATTCTAGCTTGGAATACGATCTTAATAGATCATCAAGATCGTTAAGGCGTGTCAAGCGTCTAGCGAGAATGATGAATTCATCTCTGAAACCATCTGCTGATGAATCTTCACAACATAAAACCACCATTGCAGGTTGTGCAAATTACTGAGCTTTATCCTCTCTTTTCAAACTTAGTTATGTGTTGGATTTACCTGTCTTGATGGATTAAATTGCAGGATAAAAAAAGGCCATGGGTTTTGTTTATAAAAAACCAATTGGTAAGGTGATAAGTAATTCATACAAGGTATCTTCGTCATTTGGGATTTCCAACAACAATCAAATCGTTGGTCTCCATTAATGAAATGTGATTCTAACGGGGATTTCACATCAGTTTGGTTGAATCTTTCTTATTAAAGGAAAGACAAGGGTACAAACATGCCCAAAAATGGAAGAAACAGAGGATGGCGGATCCGCTGGCTTGGCCTTTACAGGCGAGAGAGAAATTCAGAGTCTTCCAGCAAAAGAACAGAGAAGGAGGAGGATATTGTAA

mRNA sequence

ATGGAAGGATGGGCAATGCAGAGGGAGAAAGAGCGAGAACGACGACGTATAAGGGACAGAGAAAGAAGATCGTCAATGAGCATTGAACAGAGAGAGAGGCATCTCGCAAGACGTCGTCGAAACTACCAAATACGAAGATTGAAATATCGAAATGGGAAAACCACAAATCCAAGCTTTTCTGGAACAAATTCATTTAAGGCGGTCTCAGAAACTTCCATTGCAGAGCTTGATCTGCAACAAAATGGGCTTATGCTCGTCGGTTTCAATCACGAACAAGAATCCTTAAATCCAGATTCCATAACGTCTTCCAGTTCTGAAATATTGGACCCAAGAGCTGAAATTCTCCAAGGGAGGGTACGTTTGAGTCATATTCGACGACTTGCACGTTCAATTGGGATTCACCAAATGTTTTCACAAGTAGAATCAACTTCCAATTGTAAGTCTGAGGATTCTAGCTTGGAATACGATCTTAATAGATCATCAAGATCGTTAAGGCGTGTCAAGCGTCTAGCGAGAATGATGAATTCATCTCTGAAACCATCTGCTGATGAATCTTCACAACATAAAACCACCATTGCAGGAAAGACAAGGGTACAAACATGCCCAAAAATGGAAGAAACAGAGGATGGCGGATCCGCTGGCTTGGCCTTTACAGGCGAGAGAGAAATTCAGAGTCTTCCAGCAAAAGAACAGAGAAGGAGGAGGATATTGTAA

Coding sequence (CDS)

ATGGAAGGATGGGCAATGCAGAGGGAGAAAGAGCGAGAACGACGACGTATAAGGGACAGAGAAAGAAGATCGTCAATGAGCATTGAACAGAGAGAGAGGCATCTCGCAAGACGTCGTCGAAACTACCAAATACGAAGATTGAAATATCGAAATGGGAAAACCACAAATCCAAGCTTTTCTGGAACAAATTCATTTAAGGCGGTCTCAGAAACTTCCATTGCAGAGCTTGATCTGCAACAAAATGGGCTTATGCTCGTCGGTTTCAATCACGAACAAGAATCCTTAAATCCAGATTCCATAACGTCTTCCAGTTCTGAAATATTGGACCCAAGAGCTGAAATTCTCCAAGGGAGGGTACGTTTGAGTCATATTCGACGACTTGCACGTTCAATTGGGATTCACCAAATGTTTTCACAAGTAGAATCAACTTCCAATTGTAAGTCTGAGGATTCTAGCTTGGAATACGATCTTAATAGATCATCAAGATCGTTAAGGCGTGTCAAGCGTCTAGCGAGAATGATGAATTCATCTCTGAAACCATCTGCTGATGAATCTTCACAACATAAAACCACCATTGCAGGAAAGACAAGGGTACAAACATGCCCAAAAATGGAAGAAACAGAGGATGGCGGATCCGCTGGCTTGGCCTTTACAGGCGAGAGAGAAATTCAGAGTCTTCCAGCAAAAGAACAGAGAAGGAGGAGGATATTGTAA

Protein sequence

MEGWAMQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQIRRLKYRNGKTTNPSFSGTNSFKAVSETSIAELDLQQNGLMLVGFNHEQESLNPDSITSSSSEILDPRAEILQGRVRLSHIRRLARSIGIHQMFSQVESTSNCKSEDSSLEYDLNRSSRSLRRVKRLARMMNSSLKPSADESSQHKTTIAGKTRVQTCPKMEETEDGGSAGLAFTGEREIQSLPAKEQRRRRIL*
Homology
[Close]
BLAST of CsaV3_6G048400.1 vs. NCBI nr
Match: KAE8647641.1 (hypothetical protein Csa_002846 [Cucumis sativus])

HSP 1 Score: 436.4 bits (1121), Expect = 1.6e-118
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0 

Query: 1   MEGWAMQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQIRRLKYRNGKTTNPSFS 60
           MEGWAMQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQIRRLKYRNGKTTNPSFS
Sbjct: 1   MEGWAMQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQIRRLKYRNGKTTNPSFS 60

Query: 61  GTNSFKAVSETSIAELDLQQNGLMLVGFNHEQESLNPDSITSSSSEILDPRAEILQGRVR 120
           GTNSFKAVSETSIAELDLQQNGLMLVGFNHEQESLNPDSITSSSSEILDPRAEILQGRVR
Sbjct: 61  GTNSFKAVSETSIAELDLQQNGLMLVGFNHEQESLNPDSITSSSSEILDPRAEILQGRVR 120

Query: 121 LSHIRRLARSIGIHQMFSQVESTSNCKSEDSSLEYDLNRSSRSLRRVKRLARMMNSSLKP 180
           LSHIRRLARSIGIHQMFSQVESTSNCKSEDSSLEYDLNRSSRSLRRVKRLARMMNSSLKP
Sbjct: 121 LSHIRRLARSIGIHQMFSQVESTSNCKSEDSSLEYDLNRSSRSLRRVKRLARMMNSSLKP 180

Query: 181 SADESSQHKTTIAGKTRVQTCPKMEETEDGGSAGLAFTGEREIQSLPAKEQRRRRIL 238
           SADESSQHKTTIAGKTRVQTCPKMEETEDGGSAGLAFTGEREIQSLPAKEQRRRRIL
Sbjct: 181 SADESSQHKTTIAGKTRVQTCPKMEETEDGGSAGLAFTGEREIQSLPAKEQRRRRIL 237

[Close]
BLAST of CsaV3_6G048400.1 vs. NCBI nr
Match: XP_031742910.1 (uncharacterized protein LOC101212529 [Cucumis sativus])

HSP 1 Score: 353.6 bits (906), Expect = 1.3e-93
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0 

Query: 1   MEGWAMQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQIRRLKYRNGKTTNPSFS 60
           MEGWAMQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQIRRLKYRNGKTTNPSFS
Sbjct: 1   MEGWAMQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQIRRLKYRNGKTTNPSFS 60

Query: 61  GTNSFKAVSETSIAELDLQQNGLMLVGFNHEQESLNPDSITSSSSEILDPRAEILQGRVR 120
           GTNSFKAVSETSIAELDLQQNGLMLVGFNHEQESLNPDSITSSSSEILDPRAEILQGRVR
Sbjct: 61  GTNSFKAVSETSIAELDLQQNGLMLVGFNHEQESLNPDSITSSSSEILDPRAEILQGRVR 120

Query: 121 LSHIRRLARSIGIHQMFSQVESTSNCKSEDSSLEYDLNRSSRSLRRVKRLARMMNSSLKP 180
           LSHIRRLARSIGIHQMFSQVESTSNCKSEDSSLEYDLNRSSRSLRRVKRLARMMNSSLKP
Sbjct: 121 LSHIRRLARSIGIHQMFSQVESTSNCKSEDSSLEYDLNRSSRSLRRVKRLARMMNSSLKP 180

Query: 181 SADESSQHKTTIAG 195
           SADESSQHKTTIAG
Sbjct: 181 SADESSQHKTTIAG 194

[Close]
BLAST of CsaV3_6G048400.1 vs. NCBI nr
Match: TYK12993.1 (uncharacterized protein E5676_scaffold255G005900 [Cucumis melo var. makuwa])

HSP 1 Score: 316.2 bits (809), Expect = 2.4e-82
Identity = 176/196 (89.80%), Postives = 188/196 (95.92%), Query Frame = 0 

Query: 1   MEGWAMQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQIRRLKYRNGKTTNPSFS 60
           MEG A++REKERERRRIRDRERRSSMSIEQRERHLARRRRNYQ+RRLKYRN KTTNPSFS
Sbjct: 1   MEGSALRREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQLRRLKYRNVKTTNPSFS 60

Query: 61  GTNSFKAVSETSIAELDLQQNGLMLVGFNHEQESLNPDSITSSSSEILDPRAEILQGRVR 120
           GTNSFKA+S TSIAELDLQQNG+MLVGFNHEQESLNPDSITSSSSE LDPRAEILQGRVR
Sbjct: 61  GTNSFKAISGTSIAELDLQQNGIMLVGFNHEQESLNPDSITSSSSETLDPRAEILQGRVR 120

Query: 121 LSHIRRLARSIGIHQMFSQV--ESTSNCKSEDSSLEYDLNRSSRSLRRVKRLARMMNSSL 180
           LSHIRRLARSIGIHQMFSQV  ESTSNCKS+DS+LEYDL+R S+SLR VKRLARMMNSS+
Sbjct: 121 LSHIRRLARSIGIHQMFSQVGLESTSNCKSKDSNLEYDLSRPSKSLRHVKRLARMMNSSV 180

Query: 181 KPSADESSQHKTTIAG 195
           KPSA+ESSQH+TTIAG
Sbjct: 181 KPSANESSQHQTTIAG 196

[Close]
BLAST of CsaV3_6G048400.1 vs. NCBI nr
Match: XP_008440080.1 (PREDICTED: uncharacterized protein LOC103484665 [Cucumis melo])

HSP 1 Score: 315.1 bits (806), Expect = 5.2e-82
Identity = 175/196 (89.29%), Postives = 188/196 (95.92%), Query Frame = 0 

Query: 1   MEGWAMQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQIRRLKYRNGKTTNPSFS 60
           MEG A++REKERERRRIRDRERRSSMSIEQRERHLARRRRNYQ+RRLKY+N KTTNPSFS
Sbjct: 1   MEGSALRREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQLRRLKYQNVKTTNPSFS 60

Query: 61  GTNSFKAVSETSIAELDLQQNGLMLVGFNHEQESLNPDSITSSSSEILDPRAEILQGRVR 120
           GTNSFKA+SETSIAELDLQQNG+MLVGFNHEQESLNPDSITSSSSE LDPRAEILQGRVR
Sbjct: 61  GTNSFKAISETSIAELDLQQNGIMLVGFNHEQESLNPDSITSSSSETLDPRAEILQGRVR 120

Query: 121 LSHIRRLARSIGIHQMFSQV--ESTSNCKSEDSSLEYDLNRSSRSLRRVKRLARMMNSSL 180
           LSHIRRLARSIGIHQMFSQV  ESTSNCKS+DS+LEYDL+R S+SLR VKRLARMMNSS+
Sbjct: 121 LSHIRRLARSIGIHQMFSQVGLESTSNCKSKDSNLEYDLSRPSKSLRHVKRLARMMNSSV 180

Query: 181 KPSADESSQHKTTIAG 195
           KPSA+ESSQH+T IAG
Sbjct: 181 KPSANESSQHQTIIAG 196

[Close]
BLAST of CsaV3_6G048400.1 vs. NCBI nr
Match: XP_038881721.1 (uncharacterized protein LOC120073145 isoform X1 [Benincasa hispida] >XP_038881722.1 uncharacterized protein LOC120073145 isoform X1 [Benincasa hispida])

HSP 1 Score: 254.2 bits (648), Expect = 1.1e-63
Identity = 151/202 (74.75%), Postives = 168/202 (83.17%), Query Frame = 0 

Query: 1   MEGWAMQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQIRRLKYRNGKTTNPSFS 60
           ME  A+QRE+ERERRRIRD+ERRSSMS EQRERHLARRRRNYQ+RRL+ RN K TN  FS
Sbjct: 1   MEETALQRERERERRRIRDKERRSSMSTEQRERHLARRRRNYQLRRLRSRNVKITNLCFS 60

Query: 61  GTNSFKAVSETSIAELDLQQNGLMLVGFNHEQESLNPDSITSSSSEILDPRAEILQGRVR 120
            T  +KAV+ETSIAELDLQ+NGL LVGFNHEQESLNPDS  SSS E L P+AE  QGRVR
Sbjct: 61  ETKFYKAVAETSIAELDLQRNGLTLVGFNHEQESLNPDSTMSSSFETLGPKAETFQGRVR 120

Query: 121 LSHIRRLARSIGIHQMFSQV----ESTSNCKSEDSSLEYDLNRSSRSLR--RVKRLARMM 180
           LSHIRRLARSIGIHQM+SQ+    ESTSNCK ED +LEYD +RSS+ LR   +K LARMM
Sbjct: 121 LSHIRRLARSIGIHQMYSQMSFVEESTSNCKCEDLNLEYDQSRSSKVLRLNHIKHLARMM 180

Query: 181 NSSLKPSADESSQHKTTIAGKT 197
           NSS+KPS DE SQH+TTIAG T
Sbjct: 181 NSSVKPSTDE-SQHQTTIAGST 201

[Close]
BLAST of CsaV3_6G048400.1 vs. ExPASy TrEMBL
Match: A0A0A0KHQ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511630 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 6.4e-94
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0 

Query: 1   MEGWAMQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQIRRLKYRNGKTTNPSFS 60
           MEGWAMQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQIRRLKYRNGKTTNPSFS
Sbjct: 52  MEGWAMQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQIRRLKYRNGKTTNPSFS 111

Query: 61  GTNSFKAVSETSIAELDLQQNGLMLVGFNHEQESLNPDSITSSSSEILDPRAEILQGRVR 120
           GTNSFKAVSETSIAELDLQQNGLMLVGFNHEQESLNPDSITSSSSEILDPRAEILQGRVR
Sbjct: 112 GTNSFKAVSETSIAELDLQQNGLMLVGFNHEQESLNPDSITSSSSEILDPRAEILQGRVR 171

Query: 121 LSHIRRLARSIGIHQMFSQVESTSNCKSEDSSLEYDLNRSSRSLRRVKRLARMMNSSLKP 180
           LSHIRRLARSIGIHQMFSQVESTSNCKSEDSSLEYDLNRSSRSLRRVKRLARMMNSSLKP
Sbjct: 172 LSHIRRLARSIGIHQMFSQVESTSNCKSEDSSLEYDLNRSSRSLRRVKRLARMMNSSLKP 231

Query: 181 SADESSQHKTTIAG 195
           SADESSQHKTTIAG
Sbjct: 232 SADESSQHKTTIAG 245

[Close]
BLAST of CsaV3_6G048400.1 vs. ExPASy TrEMBL
Match: A0A5D3CM44 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005900 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 1.1e-82
Identity = 176/196 (89.80%), Postives = 188/196 (95.92%), Query Frame = 0 

Query: 1   MEGWAMQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQIRRLKYRNGKTTNPSFS 60
           MEG A++REKERERRRIRDRERRSSMSIEQRERHLARRRRNYQ+RRLKYRN KTTNPSFS
Sbjct: 1   MEGSALRREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQLRRLKYRNVKTTNPSFS 60

Query: 61  GTNSFKAVSETSIAELDLQQNGLMLVGFNHEQESLNPDSITSSSSEILDPRAEILQGRVR 120
           GTNSFKA+S TSIAELDLQQNG+MLVGFNHEQESLNPDSITSSSSE LDPRAEILQGRVR
Sbjct: 61  GTNSFKAISGTSIAELDLQQNGIMLVGFNHEQESLNPDSITSSSSETLDPRAEILQGRVR 120

Query: 121 LSHIRRLARSIGIHQMFSQV--ESTSNCKSEDSSLEYDLNRSSRSLRRVKRLARMMNSSL 180
           LSHIRRLARSIGIHQMFSQV  ESTSNCKS+DS+LEYDL+R S+SLR VKRLARMMNSS+
Sbjct: 121 LSHIRRLARSIGIHQMFSQVGLESTSNCKSKDSNLEYDLSRPSKSLRHVKRLARMMNSSV 180

Query: 181 KPSADESSQHKTTIAG 195
           KPSA+ESSQH+TTIAG
Sbjct: 181 KPSANESSQHQTTIAG 196

[Close]
BLAST of CsaV3_6G048400.1 vs. ExPASy TrEMBL
Match: A0A1S3B0B1 (uncharacterized protein LOC103484665 OS=Cucumis melo OX=3656 GN=LOC103484665 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 2.5e-82
Identity = 175/196 (89.29%), Postives = 188/196 (95.92%), Query Frame = 0 

Query: 1   MEGWAMQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQIRRLKYRNGKTTNPSFS 60
           MEG A++REKERERRRIRDRERRSSMSIEQRERHLARRRRNYQ+RRLKY+N KTTNPSFS
Sbjct: 1   MEGSALRREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQLRRLKYQNVKTTNPSFS 60

Query: 61  GTNSFKAVSETSIAELDLQQNGLMLVGFNHEQESLNPDSITSSSSEILDPRAEILQGRVR 120
           GTNSFKA+SETSIAELDLQQNG+MLVGFNHEQESLNPDSITSSSSE LDPRAEILQGRVR
Sbjct: 61  GTNSFKAISETSIAELDLQQNGIMLVGFNHEQESLNPDSITSSSSETLDPRAEILQGRVR 120

Query: 121 LSHIRRLARSIGIHQMFSQV--ESTSNCKSEDSSLEYDLNRSSRSLRRVKRLARMMNSSL 180
           LSHIRRLARSIGIHQMFSQV  ESTSNCKS+DS+LEYDL+R S+SLR VKRLARMMNSS+
Sbjct: 121 LSHIRRLARSIGIHQMFSQVGLESTSNCKSKDSNLEYDLSRPSKSLRHVKRLARMMNSSV 180

Query: 181 KPSADESSQHKTTIAG 195
           KPSA+ESSQH+T IAG
Sbjct: 181 KPSANESSQHQTIIAG 196

[Close]
BLAST of CsaV3_6G048400.1 vs. ExPASy TrEMBL
Match: A0A6J1IRH4 (uncharacterized protein LOC111478702 OS=Cucurbita maxima OX=3661 GN=LOC111478702 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 2.0e-55
Identity = 140/207 (67.63%), Postives = 162/207 (78.26%), Query Frame = 0 

Query: 1   MEGWAMQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQIRRLKYRNGKTTNPSFS 60
           ME  A QR+KERERRRIRDRERRSSM++EQRERHLA RRRNY +RRL+ R+ +TTNPS S
Sbjct: 1   MEESASQRDKERERRRIRDRERRSSMTVEQRERHLASRRRNYHLRRLRSRSVRTTNPSVS 60

Query: 61  G------TNSFKAVSETSIAELDLQQNGLMLVGFNHEQESLNPDSITSSSSEILDPRAEI 120
                  TNS + V+ETSIAELDLQ+NGL L+ FNHEQ+      +TSS SE LDP+AEI
Sbjct: 61  SPIEMAETNSNQTVAETSIAELDLQRNGLTLIDFNHEQQ------LTSSGSETLDPKAEI 120

Query: 121 LQGRVRLSHIRRLARSIGIHQMF-SQVESTSNCKSEDSSLEYDLNRSSRSLR--RVKRLA 180
           LQGRVRLSHIRRLARSIGIHQM  S  EST NCKSED SLE D  RSS++LR  RVK LA
Sbjct: 121 LQGRVRLSHIRRLARSIGIHQMMDSMEESTGNCKSEDHSLECDPRRSSKALRLNRVKHLA 180

Query: 181 RMMNSSLKPSADESSQHKTTIAGKTRV 199
           R +NSS+KPSA + SQ++T IAG T +
Sbjct: 181 RKINSSVKPSAADESQNQTAIAGSTNL 201

[Close]
BLAST of CsaV3_6G048400.1 vs. ExPASy TrEMBL
Match: A0A6J1GDC8 (uncharacterized protein LOC111453147 OS=Cucurbita moschata OX=3662 GN=LOC111453147 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.5e-50
Identity = 134/206 (65.05%), Postives = 156/206 (75.73%), Query Frame = 0 

Query: 1   MEGWAMQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQIRRLKYRNGKTTNPSFS 60
           ME    QR++ERERRRIRDRERRSSM++EQRERHLA RRRNY +RRL+ R+ + +NPS S
Sbjct: 1   MEESPSQRDRERERRRIRDRERRSSMTVEQRERHLACRRRNYHLRRLRSRSVRASNPSVS 60

Query: 61  G------TNSFKAVSETSIAELDLQQNGLMLVGFNHEQESLNPDSITSSSSEILDPRAEI 120
                  TNS + V+ETSIAELDLQ+NG+ L+ FNHEQ+      +TSS SE LDP+AEI
Sbjct: 61  SPIEMAETNSHQTVAETSIAELDLQRNGITLIDFNHEQQ------MTSSGSETLDPKAEI 120

Query: 121 LQGRVRLSHIRRLARSIGIHQMF-SQVESTSNCKSEDSSLEYDLNRSSRSLR--RVKRLA 180
           LQGRVRLSHIRRLARSIGIHQM  S  ES  NCKSED SLE D  RSS++LR  RVK LA
Sbjct: 121 LQGRVRLSHIRRLARSIGIHQMMDSMEESNGNCKSEDHSLECDPRRSSKALRLNRVKHLA 180

Query: 181 RMMNSSLKPSA-DESSQHKTTIAGKT 197
           R MNSS KPSA  + S ++T IAG T
Sbjct: 181 RKMNSSAKPSAVPDESLNQTAIAGST 200

[Close]
BLAST of CsaV3_6G048400.1 vs. TAIR 10
Match: AT4G16460.1 (unknown protein; Has 58 Blast hits to 58 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 30; Fungi - 4; Plants - 16; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). )

HSP 1 Score: 62.0 bits (149), Expect = 7.5e-10
Identity = 59/184 (32.07%), Postives = 92/184 (50.00%), Query Frame = 0 

Query: 1   MEGWAMQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQIRRLKYRNGKTTNPSFS 60
           +E  + ++E+ERERRR+RDRERR SMS ++RERHLARRR+NYQ+RR +    +  +P  +
Sbjct: 6   VESRSSRKEQERERRRLRDRERRQSMSQDERERHLARRRKNYQLRRQRAEVNRLDSPIQA 65

Query: 61  GTNSFKAVSETSIAELDLQQNGLMLVGFNHEQESLNPD---SITSSSSEILDPRAEI--L 120
                                   + G N    +  PD   S   S   ++ P  E+  +
Sbjct: 66  ------------------------ITGGNQAALNSPPDSGASFVESDQSVVIPVEELAKM 125

Query: 121 QGRVRLSHIRRLARSIGIHQMFSQVESTSNCKSEDSSLEYDLNRSSRSLRRVKRLARMMN 180
            G +RL+ ++ LAR++      +  ES SN  + D+     ++   R L R+KRL R   
Sbjct: 126 MGTIRLTRLKHLARTLNKSSTSTGAES-SNTGATDAKTRCAMSNGLR-LSRIKRLVRFKG 163

[Close]
BLAST of CsaV3_6G048400.1 vs. TAIR 10
Match: AT4G16460.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, flower; EXPRESSED DURING: 4 anthesis; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 62.0 bits (149), Expect = 7.5e-10
Identity = 59/184 (32.07%), Postives = 92/184 (50.00%), Query Frame = 0 

Query: 1   MEGWAMQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQIRRLKYRNGKTTNPSFS 60
           +E  + ++E+ERERRR+RDRERR SMS ++RERHLARRR+NYQ+RR +    +  +P  +
Sbjct: 6   VESRSSRKEQERERRRLRDRERRQSMSQDERERHLARRRKNYQLRRQRAEVNRLDSPIQA 65

Query: 61  GTNSFKAVSETSIAELDLQQNGLMLVGFNHEQESLNPD---SITSSSSEILDPRAEI--L 120
                                   + G N    +  PD   S   S   ++ P  E+  +
Sbjct: 66  ------------------------ITGGNQAALNSPPDSGASFVESDQSVVIPVEELAKM 125

Query: 121 QGRVRLSHIRRLARSIGIHQMFSQVESTSNCKSEDSSLEYDLNRSSRSLRRVKRLARMMN 180
            G +RL+ ++ LAR++      +  ES SN  + D+     ++   R L R+KRL R   
Sbjct: 126 MGTIRLTRLKHLARTLNKSSTSTGAES-SNTGATDAKTRCAMSNGLR-LSRIKRLVRFKG 163

[Close]
BLAST of CsaV3_6G048400.1 vs. TAIR 10
Match: AT4G16460.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, flower; EXPRESSED DURING: 4 anthesis; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 62.0 bits (149), Expect = 7.5e-10
Identity = 59/184 (32.07%), Postives = 92/184 (50.00%), Query Frame = 0 

Query: 1   MEGWAMQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQIRRLKYRNGKTTNPSFS 60
           +E  + ++E+ERERRR+RDRERR SMS ++RERHLARRR+NYQ+RR +    +  +P  +
Sbjct: 6   VESRSSRKEQERERRRLRDRERRQSMSQDERERHLARRRKNYQLRRQRAEVNRLDSPIQA 65

Query: 61  GTNSFKAVSETSIAELDLQQNGLMLVGFNHEQESLNPD---SITSSSSEILDPRAEI--L 120
                                   + G N    +  PD   S   S   ++ P  E+  +
Sbjct: 66  ------------------------ITGGNQAALNSPPDSGASFVESDQSVVIPVEELAKM 125

Query: 121 QGRVRLSHIRRLARSIGIHQMFSQVESTSNCKSEDSSLEYDLNRSSRSLRRVKRLARMMN 180
            G +RL+ ++ LAR++      +  ES SN  + D+     ++   R L R+KRL R   
Sbjct: 126 MGTIRLTRLKHLARTLNKSSTSTGAES-SNTGATDAKTRCAMSNGLR-LSRIKRLVRFKG 163

The following BLAST results are available for this feature:
BLAST of CsaV3_6G048400.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8647641.11.6e-118100.00hypothetical protein Csa_002846 [Cucumis sativus][more]
XP_031742910.11.3e-93100.00uncharacterized protein LOC101212529 [Cucumis sativus][more]
TYK12993.12.4e-8289.80uncharacterized protein E5676_scaffold255G005900 [Cucumis melo var. makuwa][more]
XP_008440080.15.2e-8289.29PREDICTED: uncharacterized protein LOC103484665 [Cucumis melo][more]
XP_038881721.11.1e-6374.75uncharacterized protein LOC120073145 isoform X1 [Benincasa hispida] >XP_03888172... [more]
BLAST of CsaV3_6G048400.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G048400.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KHQ06.4e-94100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511630 PE=4 SV=1[more]
A0A5D3CM441.1e-8289.80Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3B0B12.5e-8289.29uncharacterized protein LOC103484665 OS=Cucumis melo OX=3656 GN=LOC103484665 PE=... [more]
A0A6J1IRH42.0e-5567.63uncharacterized protein LOC111478702 OS=Cucurbita maxima OX=3661 GN=LOC111478702... [more]
A0A6J1GDC81.5e-5065.05uncharacterized protein LOC111453147 OS=Cucurbita moschata OX=3662 GN=LOC1114531... [more]
BLAST of CsaV3_6G048400.1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G16460.17.5e-1032.07unknown protein; Has 58 Blast hits to 58 proteins in 23 species: Archae - 0; Bac... [more]
AT4G16460.27.5e-1032.07unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G16460.37.5e-1032.07unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..35
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 175..237
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 178..197

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CsaV3_6G048400CsaV3_6G048400gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsaV3_6G048400.1.exon1CsaV3_6G048400.1.exon1exon
CsaV3_6G048400.1.exon2CsaV3_6G048400.1.exon2exon
CsaV3_6G048400.1.exon3CsaV3_6G048400.1.exon3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsaV3_6G048400.1.cds1CsaV3_6G048400.1.cds1CDS
CsaV3_6G048400.1.cds2CsaV3_6G048400.1.cds2CDS
CsaV3_6G048400.1.cds3CsaV3_6G048400.1.cds3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CsaV3_6G048400.1CsaV3_6G048400.1-proteinpolypeptide