CsaV3_6G044120.1 (mRNA) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G044120.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	transcription factor DIVARICATA-like
Location	chr6: 26052943 .. 26054677 (-)
Sequence length	720
RNA-Seq Expression	CsaV3_6G044120.1
Synteny	CsaV3_6G044120.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCATTCCAAAACCTCCCCTCTCCAATTCTCTTCATCTCCCCCTCTCTCTTTTTTTTTTCTCTCACTCCCGCCACGGGAAAGGCCAATGGAACCCCATTCTCCTTCCTTCGGCCTTTTCCCTGTCGCTTCACTTTCTTCTCCCACTCCCTGGACTCGCCACCAGGATAACCTTTTTGAGCACGCTCTCGTTCTGGTCCCCGATAATTCTCCTGACCGTTGGATCAAAATCGCCGCTCTTGTTCCTGGTAAATCAGCGGCCGACGTTAGATATCATTATGATGTCTTGGTTTCGGACGTACTGGATATTGACTCTGGACGAGTTGAGTTGCCCAATTATGCTGATGACTTGACGGTGGCCAAATCGTCGGAGAGGGAGAGGTCGCCGCCGTCGCCACGTCCAGTATCGGAGAAAACCTCGACGACTGAGAGGAAAAAGGGGAAACCCTGGACGAAAAAGGAACATCAGTACGTTACGTTACTTCAACTTAATTTAGCCTCTCCTATATGATTATTATTAATATTCTTTAGTACATATATAACTATTTTAAAATACCATTTTAAATAGTTTGATTTCTAAAAACTCTTTTGCCAATTCTTAATTATAATCATAGTTCAACTATTACTACCTAAATTTAAGATTTATCAAATGACGCATGAAAATTTATAGTTGTATCAAAGTTGAAACTAAGTTAAAAGCATGTGTTTATATTAGTATAACTTCCATCTCTTAATATTCAATCACTCACTTCATAATTTTTCAACTATAAAAGTAAAAGAATTATATTCAATAAAAGGTTGATGATTATATATTTTATTCAAGAGATTAGTTTAAAACTTTGTAATTGTAACTATTATTTATTAGCATTTTCATGGTAGATTTTAGCAAACACGTTTATTTATTTTTAGCATTGAAATTATTGATATTATTAAAAAATTATATATAAAATCAACTTCTTAGAACTAATAAATTTTAAGATTTATAAAAGTATTTTGATATAACGATCATAATGACAGAAATGTATGTTAACCCATTAATATTTTAAAGTGTCAATTACTTGCTAAAATTGGATGACTTATTATTATTTAACTATATAAAAATTGAAAGTTAGACAAAAAATAAATAGAAATATTTGATATGTATAAGAAAAGAAATTCAAATGAATTTTCCAAATGTGGCAGGCTGTTTTTATTAGGGCTGAAGAAATTTGGAAAGGGAGATTGGAGAAGCATTTCTAGAAATGCGGTGATTACAAGAACTCCAACTCAAGTAGCAAGTCATGCTCAAAAATATTTTCTTCGTCAAGAATCTGCCAAAAAGGATCGAAAAAGATCAAGTATTCACGATATCACCACCGTAGAAGGCAGTTTAGTAACGACGTCAACAACTGCTATCGGTCAAAGTCAACCAAGTATTTTGTCAGTGACTCAACCGCTATCGTCGTCGTTTCCACTACATATGCGACACCAATTTGCATCTTCAGGCTATTTTCCTTACCGAAGAAGTTTGTTGGATTACTAAAGCATGGAGTTATTTAATCATACGCAAACGTAGAATATATAATTGAGTATACGGTATACCATATTGTTTTTTTATAAAATACTATAGTTGTATGCAAAAGAAAATGGCAAAAGTTCACTTTATTGAGATTTTGTCGTTTTTGAATTATGTTATCCATCGGTTTTGTGTAATGATGAACGTATCAAACAAATATAAAATATATAAATACTTCGTAA

mRNA sequence

ATGGAACCCCATTCTCCTTCCTTCGGCCTTTTCCCTGTCGCTTCACTTTCTTCTCCCACTCCCTGGACTCGCCACCAGGATAACCTTTTTGAGCACGCTCTCGTTCTGGTCCCCGATAATTCTCCTGACCGTTGGATCAAAATCGCCGCTCTTGTTCCTGGTAAATCAGCGGCCGACGTTAGATATCATTATGATGTCTTGGTTTCGGACGTACTGGATATTGACTCTGGACGAGTTGAGTTGCCCAATTATGCTGATGACTTGACGGTGGCCAAATCGTCGGAGAGGGAGAGGTCGCCGCCGTCGCCACGTCCAGTATCGGAGAAAACCTCGACGACTGAGAGGAAAAAGGGGAAACCCTGGACGAAAAAGGAACATCAGCTGTTTTTATTAGGGCTGAAGAAATTTGGAAAGGGAGATTGGAGAAGCATTTCTAGAAATGCGGTGATTACAAGAACTCCAACTCAAGTAGCAAGTCATGCTCAAAAATATTTTCTTCGTCAAGAATCTGCCAAAAAGGATCGAAAAAGATCAAGTATTCACGATATCACCACCGTAGAAGGCAGTTTAGTAACGACGTCAACAACTGCTATCGGTCAAAGTCAACCAAGTATTTTGTCAGTGACTCAACCGCTATCGTCGTCGTTTCCACTACATATGCGACACCAATTTGCATCTTCAGGCTATTTTCCTTACCGAAGAAGTTTGTTGGATTACTAA

Coding sequence (CDS)

ATGGAACCCCATTCTCCTTCCTTCGGCCTTTTCCCTGTCGCTTCACTTTCTTCTCCCACTCCCTGGACTCGCCACCAGGATAACCTTTTTGAGCACGCTCTCGTTCTGGTCCCCGATAATTCTCCTGACCGTTGGATCAAAATCGCCGCTCTTGTTCCTGGTAAATCAGCGGCCGACGTTAGATATCATTATGATGTCTTGGTTTCGGACGTACTGGATATTGACTCTGGACGAGTTGAGTTGCCCAATTATGCTGATGACTTGACGGTGGCCAAATCGTCGGAGAGGGAGAGGTCGCCGCCGTCGCCACGTCCAGTATCGGAGAAAACCTCGACGACTGAGAGGAAAAAGGGGAAACCCTGGACGAAAAAGGAACATCAGCTGTTTTTATTAGGGCTGAAGAAATTTGGAAAGGGAGATTGGAGAAGCATTTCTAGAAATGCGGTGATTACAAGAACTCCAACTCAAGTAGCAAGTCATGCTCAAAAATATTTTCTTCGTCAAGAATCTGCCAAAAAGGATCGAAAAAGATCAAGTATTCACGATATCACCACCGTAGAAGGCAGTTTAGTAACGACGTCAACAACTGCTATCGGTCAAAGTCAACCAAGTATTTTGTCAGTGACTCAACCGCTATCGTCGTCGTTTCCACTACATATGCGACACCAATTTGCATCTTCAGGCTATTTTCCTTACCGAAGAAGTTTGTTGGATTACTAA

Protein sequence

MEPHSPSFGLFPVASLSSPTPWTRHQDNLFEHALVLVPDNSPDRWIKIAALVPGKSAADVRYHYDVLVSDVLDIDSGRVELPNYADDLTVAKSSERERSPPSPRPVSEKTSTTERKKGKPWTKKEHQLFLLGLKKFGKGDWRSISRNAVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHDITTVEGSLVTTSTTAIGQSQPSILSVTQPLSSSFPLHMRHQFASSGYFPYRRSLLDY*

Homology

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BLAST of CsaV3_6G044120.1 vs. NCBI nr
Match: XP_004141984.1 (transcription factor SRM1 [Cucumis sativus] >KGN48612.1 hypothetical protein Csa_002888 [Cucumis sativus])

HSP 1 Score: 474.6 bits (1220), Expect = 5.2e-130
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 1   MEPHSPSFGLFPVASLSSPTPWTRHQDNLFEHALVLVPDNSPDRWIKIAALVPGKSAADV 60
           MEPHSPSFGLFPVASLSSPTPWTRHQDNLFEHALVLVPDNSPDRWIKIAALVPGKSAADV
Sbjct: 1   MEPHSPSFGLFPVASLSSPTPWTRHQDNLFEHALVLVPDNSPDRWIKIAALVPGKSAADV 60

Query: 61  RYHYDVLVSDVLDIDSGRVELPNYADDLTVAKSSERERSPPSPRPVSEKTSTTERKKGKP 120
           RYHYDVLVSDVLDIDSGRVELPNYADDLTVAKSSERERSPPSPRPVSEKTSTTERKKGKP
Sbjct: 61  RYHYDVLVSDVLDIDSGRVELPNYADDLTVAKSSERERSPPSPRPVSEKTSTTERKKGKP 120

Query: 121 WTKKEHQLFLLGLKKFGKGDWRSISRNAVITRTPTQVASHAQKYFLRQESAKKDRKRSSI 180
           WTKKEHQLFLLGLKKFGKGDWRSISRNAVITRTPTQVASHAQKYFLRQESAKKDRKRSSI
Sbjct: 121 WTKKEHQLFLLGLKKFGKGDWRSISRNAVITRTPTQVASHAQKYFLRQESAKKDRKRSSI 180

Query: 181 HDITTVEGSLVTTSTTAIGQSQPSILSVTQPLSSSFPLHMRHQFASSGYFPYRRSLLDY 240
           HDITTVEGSLVTTSTTAIGQSQPSILSVTQPLSSSFPLHMRHQFASSGYFPYRRSLLDY
Sbjct: 181 HDITTVEGSLVTTSTTAIGQSQPSILSVTQPLSSSFPLHMRHQFASSGYFPYRRSLLDY 239

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BLAST of CsaV3_6G044120.1 vs. NCBI nr
Match: XP_008440393.1 (PREDICTED: transcription factor DIVARICATA-like [Cucumis melo])

HSP 1 Score: 405.6 bits (1041), Expect = 3.0e-109
Identity = 204/234 (87.18%), Postives = 215/234 (91.88%), Query Frame = 0


Query: 1   MEPHSPSFGLFPVASLSSPTPWTRHQDNLFEHALVLVPDNSPDRWIKIAALVPGKSAADV 60
           ME HS S GL P+ S SSPTPWTRHQD+LFE ALVLVPDNSPDRWIKIAALVPGKSAADV
Sbjct: 1   MEAHSSSVGLLPITSFSSPTPWTRHQDDLFERALVLVPDNSPDRWIKIAALVPGKSAADV 60

Query: 61  RYHYDVLVSDVLDIDSGRVELPNYADDLTVAKSSERERSPPSPRPVSEKTSTTERKKGKP 120
           RYHYDVLVSDVL+IDSGRVELPNYADDLT A+S ERE+SP  P P+SEK S++ERKKGKP
Sbjct: 61  RYHYDVLVSDVLNIDSGRVELPNYADDLTAARSPEREKSP--PHPISEKASSSERKKGKP 120

Query: 121 WTKKEHQLFLLGLKKFGKGDWRSISRNAVITRTPTQVASHAQKYFLRQESAKKDRKRSSI 180
           WTKKEHQLFLLGL+KFGKGDWRSISRNAVITRTPTQVASHAQKYFLRQESAKKDRKRSSI
Sbjct: 121 WTKKEHQLFLLGLRKFGKGDWRSISRNAVITRTPTQVASHAQKYFLRQESAKKDRKRSSI 180

Query: 181 HDITTVEGSLVTTSTTAIGQSQPSILSVTQPLSSSFPLHMRHQFASSGYFPYRR 235
           HDITTVEG+LV TSTT I QSQP+I  VTQPLSSSFPLHM HQFASSGYFPYRR
Sbjct: 181 HDITTVEGNLVMTSTTVINQSQPNIFPVTQPLSSSFPLHMPHQFASSGYFPYRR 232

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BLAST of CsaV3_6G044120.1 vs. NCBI nr
Match: XP_038883508.1 (transcription factor DIVARICATA-like [Benincasa hispida])

HSP 1 Score: 357.5 bits (916), Expect = 9.3e-95
Identity = 188/244 (77.05%), Postives = 203/244 (83.20%), Query Frame = 0


Query: 1   MEPHSPSFGLF-----PVASLSSPTPWTRHQDNLFEHALVLVPDNSPDRWIKIAALVPGK 60
           ME  S SFGL      P  S +SP PWTRHQD LFEHALV+VP++SP+RWIKIA LVPGK
Sbjct: 1   MEAASSSFGLLNDNWSPTTSFASPIPWTRHQDKLFEHALVMVPEDSPNRWIKIAGLVPGK 60

Query: 61  SAADVRYHYDVLVSDVLDIDSGRVELPNYADDLTVAKSSERERSPPSPRPVSEKTSTTER 120
           SAADVRYHYDVLVSDVL+IDSGRVELPNYADDL   +S ERE    SPRP+SEK + +ER
Sbjct: 61  SAADVRYHYDVLVSDVLNIDSGRVELPNYADDLAALRSPERE---DSPRPLSEK-APSER 120

Query: 121 KKGKPWTKKEHQLFLLGLKKFGKGDWRSISRNAVITRTPTQVASHAQKYFLRQESAKKDR 180
           KKGKPWTK EHQLFLLGLKKFGKGDWRSISRN VITRTPTQVASHAQKYFLRQES +KDR
Sbjct: 121 KKGKPWTKTEHQLFLLGLKKFGKGDWRSISRNTVITRTPTQVASHAQKYFLRQESGRKDR 180

Query: 181 KRSSIHDITTVEGSLVTTSTTAIGQSQPSILSVTQPLSSSFPLHMRHQFASSGYFPYRRS 240
           KRSSIHDITTVEGSLV T+  A   SQPSI SV QP S SFPL ++HQFAS  YFPY+RS
Sbjct: 181 KRSSIHDITTVEGSLV-TAAAATSHSQPSIFSVAQPSSPSFPLPLQHQFASGSYFPYQRS 239

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BLAST of CsaV3_6G044120.1 vs. NCBI nr
Match: XP_022963148.1 (transcription factor DIVARICATA-like [Cucurbita moschata])

HSP 1 Score: 324.7 bits (831), Expect = 6.7e-85
Identity = 176/244 (72.13%), Postives = 195/244 (79.92%), Query Frame = 0


Query: 1   MEPHSPSFGLF-----PVASLSSPTPWTRHQDNLFEHALVLVPDNSPDRWIKIAALVPGK 60
           ME  S SFGL      P  S+ SPTPWTRHQD +FEHALV+VP+NSP+RW+KIA LVPGK
Sbjct: 1   MEAPSSSFGLLDHYWSPTTSIPSPTPWTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGK 60

Query: 61  SAADVRYHYDVLVSDVLDIDSGRVELPNYADDLTVAKSSERERSPPSPRPVSEKTSTTER 120
           SAA+VR HYD LVSDV  IDSGRVELPNYAD+ +++ S ERE    SP  + EK S  ER
Sbjct: 61  SAAEVRDHYDALVSDVQKIDSGRVELPNYADE-SLSSSPERE----SPCQLPEKAS--ER 120

Query: 121 KKGKPWTKKEHQLFLLGLKKFGKGDWRSISRNAVITRTPTQVASHAQKYFLRQESAKKDR 180
           KKGKPWTKKEHQLFLLGLKKFGKGDWRSISRN VITRTPTQVASHAQKYFLRQESAKKDR
Sbjct: 121 KKGKPWTKKEHQLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQESAKKDR 180

Query: 181 KRSSIHDITTVEGSLVTTSTTAIGQSQPSILSVTQPLSSSFPLHMRHQFASSGYFPYRRS 240
           KRSSIHDITTVEG+LV T+  A  Q Q SI S+T   S SFPL + HQF+ + YFP +RS
Sbjct: 181 KRSSIHDITTVEGNLV-TAVAATSQGQLSIFSLTHSPSPSFPLPLTHQFSPASYFPNQRS 236

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BLAST of CsaV3_6G044120.1 vs. NCBI nr
Match: XP_023518498.1 (transcription factor DIVARICATA-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 324.3 bits (830), Expect = 8.7e-85
Identity = 176/244 (72.13%), Postives = 195/244 (79.92%), Query Frame = 0


Query: 1   MEPHSPSFGLF-----PVASLSSPTPWTRHQDNLFEHALVLVPDNSPDRWIKIAALVPGK 60
           ME  S SFGL      P  S+ SPTPWTRHQD +FEHALV+VP+NSP+RW+KIA LVPGK
Sbjct: 1   MEAPSSSFGLLDHYWSPTTSIPSPTPWTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGK 60

Query: 61  SAADVRYHYDVLVSDVLDIDSGRVELPNYADDLTVAKSSERERSPPSPRPVSEKTSTTER 120
           SAA+VR HYD LVSDV  IDSGRVELPNYAD+ +++ S ERE    SP  + EK S  ER
Sbjct: 61  SAAEVRDHYDALVSDVQKIDSGRVELPNYADE-SLSSSPERE----SPCQLPEKAS--ER 120

Query: 121 KKGKPWTKKEHQLFLLGLKKFGKGDWRSISRNAVITRTPTQVASHAQKYFLRQESAKKDR 180
           KKGKPWTKKEHQLFLLGLKKFGKGDWRSISRN VITRTPTQVASHAQKYFLRQESAKKDR
Sbjct: 121 KKGKPWTKKEHQLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQESAKKDR 180

Query: 181 KRSSIHDITTVEGSLVTTSTTAIGQSQPSILSVTQPLSSSFPLHMRHQFASSGYFPYRRS 240
           KRSSIHDITTVEG+LV T+  A  Q Q SI S+T   S SFPL + HQF+ + YFP +RS
Sbjct: 181 KRSSIHDITTVEGNLV-TAVAATSQGQLSIFSLTHSPSPSFPLPLPHQFSPASYFPNQRS 236

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BLAST of CsaV3_6G044120.1 vs. ExPASy Swiss-Prot
Match: Q9FNN6 (Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.2e-41
Identity = 98/191 (51.31%), Postives = 121/191 (63.35%), Query Frame = 0


Query: 13  VASLSSPTPWTRHQDNLFEHALVLVPDNSPDRWIKIAALVPGKSAADVRYHYDVLVSDVL 72
           V  +S  + W+R  D  FE AL    D S +RW KIAA VPGKS   ++ HY++LV DV 
Sbjct: 3   VEEVSDGSVWSREDDIAFERALANNTDESEERWEKIAADVPGKSVEQIKEHYELLVEDVT 62

Query: 73  DIDSGRVELPNY----------ADDLTVAKSSERERSPPSPRPVSEKTSTTERKKGKPWT 132
            I+SG V LP Y           D+   +K      +  S +    K S  ER+KG  WT
Sbjct: 63  RIESGCVPLPAYGSPEGSNGHAGDEGASSKKGGNSHAGESNQAGKSK-SDQERRKGIAWT 122

Query: 133 KKEHQLFLLGLKKFGKGDWRSISRNAVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHD 192
           + EH+LFLLGL K+GKGDWRSISRN V+TRTPTQVASHAQKYF+R  S  KDR+RSSIHD
Sbjct: 123 EDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHD 182

Query: 193 ITTVEGSLVTT 194
           IT+V  + V+T
Sbjct: 183 ITSVGNADVST 192

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BLAST of CsaV3_6G044120.1 vs. ExPASy Swiss-Prot
Match: Q8S9H7 (Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 6.8e-40
Identity = 98/214 (45.79%), Postives = 133/214 (62.15%), Query Frame = 0


Query: 18  SPTPWTRHQDNLFEHALVLVPDNSPDRWIKIAALVPGKSAADVRYHYDVLVSDVLDIDSG 77
           S T WT  ++  FE+AL +  +N+P+RW ++A  VPGK+  DV   Y  L  DV  I++G
Sbjct: 22  STTRWTAAENKAFENALAVFDENTPNRWERVAERVPGKTVGDVMRQYKELEDDVSSIEAG 81

Query: 78  RVELPNY--ADDLTVAKSS-------ERERSPPSPRPVSEKTSTTERKKGKPWTKKEHQL 137
            V +P Y  +   T+   S       ++       +  S + S  ERKKG PWT++EH+L
Sbjct: 82  FVPVPGYSTSSPFTLEWGSGHGFDGFKQSYGTGGRKSSSGRPSEQERKKGVPWTEEEHKL 141

Query: 138 FLLGLKKFGKGDWRSISRNAVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHDITTVEG 197
           FL+GLKK+GKGDWR+ISRN VITRTPTQVASHAQKYF+RQ S  KD++R+SIHDITTV  
Sbjct: 142 FLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTV-- 201

Query: 198 SLVTTSTTAIGQSQPSIL---SVTQPLSSSFPLH 220
           +L    T +    +P      S+ Q  +SS  +H
Sbjct: 202 NLSDNQTPSPDNKKPPSSPDHSMAQQQTSSTSIH 233

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BLAST of CsaV3_6G044120.1 vs. ExPASy Swiss-Prot
Match: B8A9B2 (Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.4e-37
Identity = 93/192 (48.44%), Postives = 115/192 (59.90%), Query Frame = 0


Query: 22  WTRHQDNLFEHALVLVPDNSP-------DRWI-KIAALVPG-KSAADVRYHYDVLVSDVL 81
           WTR  D  FE+AL       P       D W   +AA VPG +SA +VR HY+ LV DV 
Sbjct: 18  WTREDDKAFENALAACAAPPPADGGAPDDDWFAALAASVPGARSAEEVRRHYEALVEDVA 77

Query: 82  DIDSGRVELPNYADDLTVAKSSERERSPPSPRPVSEK------------------TSTTE 141
            ID+GRV LP YA + + A       +  + +    +                   +  E
Sbjct: 78  AIDAGRVPLPRYAGEESAAPPDGAGAAAAASKDGGHRRDERKGGGGGYDGGKSCSKAEQE 137

Query: 142 RKKGKPWTKKEHQLFLLGLKKFGKGDWRSISRNAVITRTPTQVASHAQKYFLRQESAKKD 187
           R+KG PWT++EH+LFLLGL KFGKGDWRSISRN VI+RTPTQVASHAQKYF+R  S  +D
Sbjct: 138 RRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRD 197

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BLAST of CsaV3_6G044120.1 vs. ExPASy Swiss-Prot
Match: Q8LH59 (Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=1 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.4e-37
Identity = 93/192 (48.44%), Postives = 115/192 (59.90%), Query Frame = 0


Query: 22  WTRHQDNLFEHALVLVPDNSP-------DRWI-KIAALVPG-KSAADVRYHYDVLVSDVL 81
           WTR  D  FE+AL       P       D W   +AA VPG +SA +VR HY+ LV DV 
Sbjct: 18  WTREDDKAFENALAACAAPPPADGGAPDDDWFAALAASVPGARSAEEVRRHYEALVEDVA 77

Query: 82  DIDSGRVELPNYADDLTVAKSSERERSPPSPRPVSEK------------------TSTTE 141
            ID+GRV LP YA + + A       +  + +    +                   +  E
Sbjct: 78  AIDAGRVPLPRYAGEESAAPPDGAGAAAAASKDGGHRRDERKGGGGGYDGGKSCSKAEQE 137

Query: 142 RKKGKPWTKKEHQLFLLGLKKFGKGDWRSISRNAVITRTPTQVASHAQKYFLRQESAKKD 187
           R+KG PWT++EH+LFLLGL KFGKGDWRSISRN VI+RTPTQVASHAQKYF+R  S  +D
Sbjct: 138 RRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRD 197

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BLAST of CsaV3_6G044120.1 vs. ExPASy Swiss-Prot
Match: Q2V9B0 (Transcription factor MYB1R1 OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.6e-23
Identity = 60/113 (53.10%), Postives = 78/113 (69.03%), Query Frame = 0


Query: 108 EKTSTTERKKGKPWTKKEHQLFLLGLKKFGKGDWRSISRNAVITRTPTQVASHAQKYFLR 167
           +  S  ERK+G PWT++EH+LFLLGL+K GKGDWR ISRN V TRTPTQVASHAQKYFLR
Sbjct: 84  QSNSGRERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLR 143

Query: 168 QESAKKDRKRSSIHDITTVEGSLVTTSTTAIGQSQPSILSVTQPL--SSSFPL 219
           + +  + R+RSS+ DITT   S++        Q  P +   T P   +++FP+
Sbjct: 144 RSNLNRRRRRSSLFDITTDSVSVMPIEEVENKQEIPVVAPATLPTTKTNAFPV 196

[Close]

BLAST of CsaV3_6G044120.1 vs. ExPASy TrEMBL
Match: A0A0A0KJP9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495660 PE=4 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 2.5e-130
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 1   MEPHSPSFGLFPVASLSSPTPWTRHQDNLFEHALVLVPDNSPDRWIKIAALVPGKSAADV 60
           MEPHSPSFGLFPVASLSSPTPWTRHQDNLFEHALVLVPDNSPDRWIKIAALVPGKSAADV
Sbjct: 1   MEPHSPSFGLFPVASLSSPTPWTRHQDNLFEHALVLVPDNSPDRWIKIAALVPGKSAADV 60

Query: 61  RYHYDVLVSDVLDIDSGRVELPNYADDLTVAKSSERERSPPSPRPVSEKTSTTERKKGKP 120
           RYHYDVLVSDVLDIDSGRVELPNYADDLTVAKSSERERSPPSPRPVSEKTSTTERKKGKP
Sbjct: 61  RYHYDVLVSDVLDIDSGRVELPNYADDLTVAKSSERERSPPSPRPVSEKTSTTERKKGKP 120

Query: 121 WTKKEHQLFLLGLKKFGKGDWRSISRNAVITRTPTQVASHAQKYFLRQESAKKDRKRSSI 180
           WTKKEHQLFLLGLKKFGKGDWRSISRNAVITRTPTQVASHAQKYFLRQESAKKDRKRSSI
Sbjct: 121 WTKKEHQLFLLGLKKFGKGDWRSISRNAVITRTPTQVASHAQKYFLRQESAKKDRKRSSI 180

Query: 181 HDITTVEGSLVTTSTTAIGQSQPSILSVTQPLSSSFPLHMRHQFASSGYFPYRRSLLDY 240
           HDITTVEGSLVTTSTTAIGQSQPSILSVTQPLSSSFPLHMRHQFASSGYFPYRRSLLDY
Sbjct: 181 HDITTVEGSLVTTSTTAIGQSQPSILSVTQPLSSSFPLHMRHQFASSGYFPYRRSLLDY 239

[Close]

BLAST of CsaV3_6G044120.1 vs. ExPASy TrEMBL
Match: A0A1S3B1M9 (transcription factor DIVARICATA-like OS=Cucumis melo OX=3656 GN=LOC103484855 PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.4e-109
Identity = 204/234 (87.18%), Postives = 215/234 (91.88%), Query Frame = 0


Query: 1   MEPHSPSFGLFPVASLSSPTPWTRHQDNLFEHALVLVPDNSPDRWIKIAALVPGKSAADV 60
           ME HS S GL P+ S SSPTPWTRHQD+LFE ALVLVPDNSPDRWIKIAALVPGKSAADV
Sbjct: 1   MEAHSSSVGLLPITSFSSPTPWTRHQDDLFERALVLVPDNSPDRWIKIAALVPGKSAADV 60

Query: 61  RYHYDVLVSDVLDIDSGRVELPNYADDLTVAKSSERERSPPSPRPVSEKTSTTERKKGKP 120
           RYHYDVLVSDVL+IDSGRVELPNYADDLT A+S ERE+SP  P P+SEK S++ERKKGKP
Sbjct: 61  RYHYDVLVSDVLNIDSGRVELPNYADDLTAARSPEREKSP--PHPISEKASSSERKKGKP 120

Query: 121 WTKKEHQLFLLGLKKFGKGDWRSISRNAVITRTPTQVASHAQKYFLRQESAKKDRKRSSI 180
           WTKKEHQLFLLGL+KFGKGDWRSISRNAVITRTPTQVASHAQKYFLRQESAKKDRKRSSI
Sbjct: 121 WTKKEHQLFLLGLRKFGKGDWRSISRNAVITRTPTQVASHAQKYFLRQESAKKDRKRSSI 180

Query: 181 HDITTVEGSLVTTSTTAIGQSQPSILSVTQPLSSSFPLHMRHQFASSGYFPYRR 235
           HDITTVEG+LV TSTT I QSQP+I  VTQPLSSSFPLHM HQFASSGYFPYRR
Sbjct: 181 HDITTVEGNLVMTSTTVINQSQPNIFPVTQPLSSSFPLHMPHQFASSGYFPYRR 232

[Close]

BLAST of CsaV3_6G044120.1 vs. ExPASy TrEMBL
Match: A0A6J1HGW8 (transcription factor DIVARICATA-like OS=Cucurbita moschata OX=3662 GN=LOC111463444 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 3.2e-85
Identity = 176/244 (72.13%), Postives = 195/244 (79.92%), Query Frame = 0


Query: 1   MEPHSPSFGLF-----PVASLSSPTPWTRHQDNLFEHALVLVPDNSPDRWIKIAALVPGK 60
           ME  S SFGL      P  S+ SPTPWTRHQD +FEHALV+VP+NSP+RW+KIA LVPGK
Sbjct: 1   MEAPSSSFGLLDHYWSPTTSIPSPTPWTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGK 60

Query: 61  SAADVRYHYDVLVSDVLDIDSGRVELPNYADDLTVAKSSERERSPPSPRPVSEKTSTTER 120
           SAA+VR HYD LVSDV  IDSGRVELPNYAD+ +++ S ERE    SP  + EK S  ER
Sbjct: 61  SAAEVRDHYDALVSDVQKIDSGRVELPNYADE-SLSSSPERE----SPCQLPEKAS--ER 120

Query: 121 KKGKPWTKKEHQLFLLGLKKFGKGDWRSISRNAVITRTPTQVASHAQKYFLRQESAKKDR 180
           KKGKPWTKKEHQLFLLGLKKFGKGDWRSISRN VITRTPTQVASHAQKYFLRQESAKKDR
Sbjct: 121 KKGKPWTKKEHQLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQESAKKDR 180

Query: 181 KRSSIHDITTVEGSLVTTSTTAIGQSQPSILSVTQPLSSSFPLHMRHQFASSGYFPYRRS 240
           KRSSIHDITTVEG+LV T+  A  Q Q SI S+T   S SFPL + HQF+ + YFP +RS
Sbjct: 181 KRSSIHDITTVEGNLV-TAVAATSQGQLSIFSLTHSPSPSFPLPLTHQFSPASYFPNQRS 236

[Close]

BLAST of CsaV3_6G044120.1 vs. ExPASy TrEMBL
Match: A0A6J1KMG9 (transcription factor DIVARICATA-like OS=Cucurbita maxima OX=3661 GN=LOC111497033 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 8.0e-84
Identity = 174/244 (71.31%), Postives = 194/244 (79.51%), Query Frame = 0


Query: 1   MEPHSPSFGLF-----PVASLSSPTPWTRHQDNLFEHALVLVPDNSPDRWIKIAALVPGK 60
           ME  S SFGL      P  S+ SPTPWTRHQD +FEHALV+VP+NSP+RW+KIA LVPGK
Sbjct: 1   MEAPSSSFGLLDHYWSPTTSIPSPTPWTRHQDKIFEHALVMVPENSPNRWMKIAGLVPGK 60

Query: 61  SAADVRYHYDVLVSDVLDIDSGRVELPNYADDLTVAKSSERERSPPSPRPVSEKTSTTER 120
           SAA+VR HYD LVSDV +IDSGRVELPNYAD+ ++  S ERE    SP  + EK S  ER
Sbjct: 61  SAAEVRDHYDALVSDVQNIDSGRVELPNYADE-SLLSSPERE----SPGQLPEKAS--ER 120

Query: 121 KKGKPWTKKEHQLFLLGLKKFGKGDWRSISRNAVITRTPTQVASHAQKYFLRQESAKKDR 180
           KKGKPWTKKEHQLFLLGLKKFGKGDWRSISRN VITRTPTQVASHAQKYFLRQESAKKDR
Sbjct: 121 KKGKPWTKKEHQLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQESAKKDR 180

Query: 181 KRSSIHDITTVEGSLVTTSTTAIGQSQPSILSVTQPLSSSFPLHMRHQFASSGYFPYRRS 240
           KRSSIHDITTVE +LV T+  A  + Q SI S+T   S SFPL + HQF+ + YFP +RS
Sbjct: 181 KRSSIHDITTVECNLV-TAVAATSEGQLSIFSLTHSPSPSFPLPLPHQFSPASYFPNQRS 236

[Close]

BLAST of CsaV3_6G044120.1 vs. ExPASy TrEMBL
Match: A0A6J1BVC4 (transcription factor DIVARICATA-like OS=Momordica charantia OX=3673 GN=LOC111005863 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 3.5e-79
Identity = 166/247 (67.21%), Postives = 191/247 (77.33%), Query Frame = 0


Query: 3   PHSPSFGL-----FPVASLSSPTPWTRHQDNLFEHALVLVPDNSPDRWIKIAALVPGKSA 62
           P SPSF +      P  + SSP PWTRHQD +FEHALV+VP+NSP+RW++IA L+PGKS 
Sbjct: 4   PPSPSFRVSDDYWSPKTAPSSPAPWTRHQDKIFEHALVMVPENSPNRWLRIAGLIPGKSP 63

Query: 63  ADVRYHYDVLVSDVLDIDSGRVELPNYADDLTVAKSSERERSPP--SPRPVSEKTSTTER 122
           A+V YHYD LVSD+LDIDSGRVELP+YA+D +VA   E E  PP  S +P   + + TER
Sbjct: 64  AEVSYHYDALVSDLLDIDSGRVELPSYAEDDSVASLPETEAPPPNLSEKPSKSRPNETER 123

Query: 123 KKGKPWTKKEHQLFLLGLKKFGKGDWRSISRNAVITRTPTQVASHAQKYFLRQESAKKDR 182
           KKGKPWTKKEHQLFLLGLKKFGKGDWRSISRN VI+RTPTQVASHAQKYFLRQESAKKDR
Sbjct: 124 KKGKPWTKKEHQLFLLGLKKFGKGDWRSISRNVVISRTPTQVASHAQKYFLRQESAKKDR 183

Query: 183 KRSSIHDITTVEGSLVTTSTTAIGQ--SQPSILSVTQPLSSSFPLHMRHQFASSGYF-PY 240
           KRSSIHDITTVEGSLV  + T   Q  + P+I+    P    +PL + HQFAS+ YF P 
Sbjct: 184 KRSSIHDITTVEGSLVAAAATDHCQLSTVPTIIQPPPP----WPL-LPHQFASASYFPPD 243

[Close]

BLAST of CsaV3_6G044120.1 vs. TAIR 10
Match: AT5G04760.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 203.0 bits (515), Expect = 2.7e-52
Identity = 103/169 (60.95%), Postives = 127/169 (75.15%), Query Frame = 0


Query: 22  WTRHQDNLFEHALVLVPDNSPDRWIKIAALVPGKSAADVRYHYDVLVSDVLDIDSGRVEL 81
           WTR +D +FE ALVL P+ SP+RW +IA  +  KSA +VR HY+VLV DV +IDSGRV++
Sbjct: 6   WTRSEDKMFEQALVLFPEGSPNRWERIADQL-HKSAGEVREHYEVLVHDVFEIDSGRVDV 65

Query: 82  PNYADDLTVAKSSERERSPPSPRPVSEKTSTTERKKGKPWTKKEHQLFLLGLKKFGKGDW 141
           P+Y DD   A +        S      K   +ERK+G PWT+ EH+LFL+GLK++GKGDW
Sbjct: 66  PDYMDDSAAAAAGWDSAGQIS---FGSKHGESERKRGTPWTENEHKLFLIGLKRYGKGDW 125

Query: 142 RSISRNAVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHDITTVEGSL 191
           RSISRN V+TRTPTQVASHAQKYFLRQ S KK+RKRSSIHDITTV+ +L
Sbjct: 126 RSISRNVVVTRTPTQVASHAQKYFLRQNSVKKERKRSSIHDITTVDATL 170

[Close]

BLAST of CsaV3_6G044120.1 vs. TAIR 10
Match: AT3G11280.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 174.1 bits (440), Expect = 1.4e-43
Identity = 87/170 (51.18%), Postives = 118/170 (69.41%), Query Frame = 0


Query: 17  SSPTPWTRHQDNLFEHALVLVPDNSPDRWIKIAALVPGKSAADVRYHYDVLVSDVLDIDS 76
           SS   WT+ ++ +FE AL +  ++SPDRW K+A+++PGK+  DV   Y  L  DV DI++
Sbjct: 28  SSSGSWTKEENKMFERALAIYAEDSPDRWFKVASMIPGKTVFDVMKQYSKLEEDVFDIEA 87

Query: 77  GRVELPNY-ADDLTVAKSSERERSPPSPRPVSEKTSTTERKKGKPWTKKEHQLFLLGLKK 136
           GRV +P Y A    +   ++  R     RP   + S  +RKKG PWT++EH+ FLLGL K
Sbjct: 88  GRVPIPGYPAASSPLGFDTDMCRK----RPSGARGSDQDRKKGVPWTEEEHRRFLLGLLK 147

Query: 137 FGKGDWRSISRNAVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHDITT 186
           +GKGDWR+ISRN V+++TPTQVASHAQKY+ RQ S  KD++R SIHDITT
Sbjct: 148 YGKGDWRNISRNFVVSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITT 193

[Close]

BLAST of CsaV3_6G044120.1 vs. TAIR 10
Match: AT3G11280.2 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 174.1 bits (440), Expect = 1.4e-43
Identity = 87/170 (51.18%), Postives = 118/170 (69.41%), Query Frame = 0


Query: 17  SSPTPWTRHQDNLFEHALVLVPDNSPDRWIKIAALVPGKSAADVRYHYDVLVSDVLDIDS 76
           SS   WT+ ++ +FE AL +  ++SPDRW K+A+++PGK+  DV   Y  L  DV DI++
Sbjct: 28  SSSGSWTKEENKMFERALAIYAEDSPDRWFKVASMIPGKTVFDVMKQYSKLEEDVFDIEA 87

Query: 77  GRVELPNY-ADDLTVAKSSERERSPPSPRPVSEKTSTTERKKGKPWTKKEHQLFLLGLKK 136
           GRV +P Y A    +   ++  R     RP   + S  +RKKG PWT++EH+ FLLGL K
Sbjct: 88  GRVPIPGYPAASSPLGFDTDMCRK----RPSGARGSDQDRKKGVPWTEEEHRRFLLGLLK 147

Query: 137 FGKGDWRSISRNAVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHDITT 186
           +GKGDWR+ISRN V+++TPTQVASHAQKY+ RQ S  KD++R SIHDITT
Sbjct: 148 YGKGDWRNISRNFVVSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITT 193

[Close]

BLAST of CsaV3_6G044120.1 vs. TAIR 10
Match: AT5G58900.1 (Homeodomain-like transcriptional regulator )

HSP 1 Score: 172.9 bits (437), Expect = 3.0e-43
Identity = 97/209 (46.41%), Postives = 135/209 (64.59%), Query Frame = 0


Query: 13  VASLSSPTPWTRHQDNLFEHALVLVPDNSPDRWIKIAALVPGKSAADVRYHYDVLVSDVL 72
           VA+      WT  ++  FE+AL +  DN+PDRW K+AA++PGK+ +DV   Y+ L +DV 
Sbjct: 25  VAASGEGATWTAAENKAFENALAVYDDNTPDRWQKVAAVIPGKTVSDVIRQYNDLEADVS 84

Query: 73  DIDSGRVELPNY--ADDLTV--------AKSSERERSPPSPRPVSEKTSTTERKKGKPWT 132
            I++G + +P Y  +   T+            +      + R  + ++   ERKKG PWT
Sbjct: 85  SIEAGLIPVPGYITSPPFTLDWAGGGGGCNGFKPGHQVCNKRSQAGRSPELERKKGVPWT 144

Query: 133 KKEHQLFLLGLKKFGKGDWRSISRNAVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHD 192
           ++EH+LFL+GLKK+GKGDWR+ISRN VITRTPTQVASHAQKYF+RQ S  KD++R+SIHD
Sbjct: 145 EEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRASIHD 204

Query: 193 ITTV----EGSLVTTSTTAIGQSQPSILS 208
           ITTV    E SL T  ++ +   Q S L+
Sbjct: 205 ITTVNLEEEASLETNKSSIVVGDQRSRLT 233

[Close]

BLAST of CsaV3_6G044120.1 vs. TAIR 10
Match: AT5G08520.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 171.4 bits (433), Expect = 8.8e-43
Identity = 98/191 (51.31%), Postives = 121/191 (63.35%), Query Frame = 0


Query: 13  VASLSSPTPWTRHQDNLFEHALVLVPDNSPDRWIKIAALVPGKSAADVRYHYDVLVSDVL 72
           V  +S  + W+R  D  FE AL    D S +RW KIAA VPGKS   ++ HY++LV DV 
Sbjct: 3   VEEVSDGSVWSREDDIAFERALANNTDESEERWEKIAADVPGKSVEQIKEHYELLVEDVT 62

Query: 73  DIDSGRVELPNY----------ADDLTVAKSSERERSPPSPRPVSEKTSTTERKKGKPWT 132
            I+SG V LP Y           D+   +K      +  S +    K S  ER+KG  WT
Sbjct: 63  RIESGCVPLPAYGSPEGSNGHAGDEGASSKKGGNSHAGESNQAGKSK-SDQERRKGIAWT 122

Query: 133 KKEHQLFLLGLKKFGKGDWRSISRNAVITRTPTQVASHAQKYFLRQESAKKDRKRSSIHD 192
           + EH+LFLLGL K+GKGDWRSISRN V+TRTPTQVASHAQKYF+R  S  KDR+RSSIHD
Sbjct: 123 EDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHD 182

Query: 193 ITTVEGSLVTT 194
           IT+V  + V+T
Sbjct: 183 ITSVGNADVST 192

The following BLAST results are available for this feature:

BLAST of CsaV3_6G044120.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141984.1	5.2e-130	100.00	transcription factor SRM1 [Cucumis sativus] >KGN48612.1 hypothetical protein Csa...	[more]
XP_008440393.1	3.0e-109	87.18	PREDICTED: transcription factor DIVARICATA-like [Cucumis melo]	[more]
XP_038883508.1	9.3e-95	77.05	transcription factor DIVARICATA-like [Benincasa hispida]	[more]
XP_022963148.1	6.7e-85	72.13	transcription factor DIVARICATA-like [Cucurbita moschata]	[more]
XP_023518498.1	8.7e-85	72.13	transcription factor DIVARICATA-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_6G044120.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNN6	1.2e-41	51.31	Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1	[more]
Q8S9H7	6.8e-40	45.79	Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 ...	[more]
B8A9B2	2.4e-37	48.44	Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 ...	[more]
Q8LH59	2.4e-37	48.44	Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=...	[more]
Q2V9B0	2.6e-23	53.10	Transcription factor MYB1R1 OS=Solanum tuberosum OX=4113 PE=2 SV=1	[more]

BLAST of CsaV3_6G044120.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJP9	2.5e-130	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495660 PE=4 SV=1	[more]
A0A1S3B1M9	1.4e-109	87.18	transcription factor DIVARICATA-like OS=Cucumis melo OX=3656 GN=LOC103484855 PE=...	[more]
A0A6J1HGW8	3.2e-85	72.13	transcription factor DIVARICATA-like OS=Cucurbita moschata OX=3662 GN=LOC1114634...	[more]
A0A6J1KMG9	8.0e-84	71.31	transcription factor DIVARICATA-like OS=Cucurbita maxima OX=3661 GN=LOC111497033...	[more]
A0A6J1BVC4	3.5e-79	67.21	transcription factor DIVARICATA-like OS=Momordica charantia OX=3673 GN=LOC111005...	[more]

BLAST of CsaV3_6G044120.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04760.1	2.7e-52	60.95	Duplicated homeodomain-like superfamily protein	[more]
AT3G11280.1	1.4e-43	51.18	Duplicated homeodomain-like superfamily protein	[more]
AT3G11280.2	1.4e-43	51.18	Duplicated homeodomain-like superfamily protein	[more]
AT5G58900.1	3.0e-43	46.41	Homeodomain-like transcriptional regulator	[more]
AT5G08520.1	8.8e-43	51.31	Duplicated homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 117..167 e-value: 9.8E-11 score: 51.7 coord: 18..70 e-value: 8.5E-6 score: 35.3
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 113..165 score: 7.398506
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 21..64 e-value: 6.1868E-6 score: 40.2514
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 120..165 e-value: 4.96702E-10 score: 51.8074
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 116..168 e-value: 4.0E-16 score: 57.1
None	No IPR available	GENE3D	1.10.10.60		coord: 14..81 e-value: 7.2E-18 score: 66.1
None	No IPR available	GENE3D	1.10.10.60		coord: 119..170 e-value: 1.7E-15 score: 59.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..123
None	No IPR available	PANTHER	PTHR44042:SF15	SYRINGOLIDE-INDUCED PROTEIN 1-3-1B	coord: 17..203
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 119..164 e-value: 8.0E-11 score: 42.0
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 113..169 score: 18.504387
IPR043363	Transcription factor DIVARICATA-like	PANTHER	PTHR44042	DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 17..203
IPR017884	SANT domain	PROSITE	PS51293	SANT	coord: 116..169 score: 10.408118
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 114..170
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 20..76

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_6G044120	CsaV3_6G044120	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_6G044120.1.exon2	CsaV3_6G044120.1.exon2	exon
CsaV3_6G044120.1.exon1	CsaV3_6G044120.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_6G044120.1.cds2	CsaV3_6G044120.1.cds2	CDS
CsaV3_6G044120.1.cds1	CsaV3_6G044120.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_6G044120.1	CsaV3_6G044120.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding