CsaV3_4G030740.1 (mRNA) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G030740.1
TypemRNA
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 20734724 .. 20734979 (-)
Sequence length125
RNA-Seq ExpressionCsaV3_4G030740.1
SyntenyCsaV3_4G030740.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTCGTTATAATAATGAGATCAGGACAAGAATCAATGGTAGGCACAAATAGGAGATCTTTATGTCGTAGTTGTGGGAGGTTTCACCGAGGTCAATGTTTGGTTGGAGCAAATATTTATTATCAGTGCAAGCAACCTAGACATTTTAGAAGGAATTGTCCTCAATTAAATCTTGATATGCAAATGGATTCACAAGTTCAATCACAGACGGTTAATCAACCAAAAGTAACAACAAGTGGAGGAGAAGGAACAAGTGAT

mRNA sequence

GCACAAATAGGAGATCTTTATGTCGTAGTTGTGGGAGGTTTCACCGAGGTCAATGTTTGGTTGGAGCAAATATTTATTATCAGTGCAAGCAACCTAGACATTTTAGAAGGAATTGTCCTCAATTA

Coding sequence (CDS)

GCACAAATAGGAGATCTTTATGTCGTAGTTGTGGGAGGTTTCACCGAGGTCAATGTTTGGTTGGAGCAAATATTTATTATCAGTGCAAGCAACCTAGACATTTTAGAAGGAATTGTCCTCAATTA

Protein sequence

AQIGDLYVVVVGGFTEVNVWLEQIFIISASNLDILEGIVLNX
Homology
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BLAST of CsaV3_4G030740.1 vs. NCBI nr
Match: KGN55123.2 (hypothetical protein Csa_023744, partial [Cucumis sativus])

HSP 1 Score: 80.5 bits (197), Expect = 3.8e-12
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 0 

Query: 1  AQIGDLYVVVVGGFTEVNVWLEQIFIISASNLDILEGIVLN 42
          AQIGDLYVVVVGGFTEVNVWLEQIFIISASNLDILEGIVLN
Sbjct: 1  AQIGDLYVVVVGGFTEVNVWLEQIFIISASNLDILEGIVLN 41

The following BLAST results are available for this feature:
BLAST of CsaV3_4G030740.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN55123.23.8e-12100.00hypothetical protein Csa_023744, partial [Cucumis sativus][more]
BLAST of CsaV3_4G030740.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G030740.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G030740.1 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CsaV3_4G030740CsaV3_4G030740gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsaV3_4G030740.1.exon1CsaV3_4G030740.1.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsaV3_4G030740.1.cds1CsaV3_4G030740.1.cds1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CsaV3_4G030740.1CsaV3_4G030740.1-proteinpolypeptide