CsaV3_4G025560.1 (mRNA) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_4G025560.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	copper ion transmembrane transporters
Location	chr4: 15049722 .. 15050732 (-)
Sequence length	1011
RNA-Seq Expression	CsaV3_4G025560.1
Synteny	CsaV3_4G025560.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCATTCTCCCAATTTCTCTCGCAATTTCAATCCCTTCTCGTCCGCCCTTATTCTCCTTCTCTCAGTCTCTAACTGGTTCAAACCACCTCTCATACCTTCCCAATCGGATGCCGATCCTCACAAAGACCACACCACTTATTCGTATGGGCGGAGGTCCTAGAACTTATCCCGGTGGAGTGTCGAAGTGGCAATGGAAGCGGATGCAGGCCAAGAAAGGTAAGCAGCTGCTTAAGGCCCGGCTGTGCCGTGAACGCCAGATATACGAGATGCGTAAGCGGGCTGAGCTTAAGGCGGCTGTATCCCAGCTGGAGAGGCCGTGGGAGGTTGTGGAGAAGGCTCCCAATTTGTTCTCTGTTGGCGCCGATGAACAGGTGAAGGTTTTGGCAGATAGGTTTCAAAGGCCTGGTGGGTTCGATTTGTGGACGGAAAGAGATGGGCCTCAATTGTTTGAGACGGTTGACGAACTACCTTCTGCAAGGTTTTTCCCGAAAGGGGTGGTTCACAGTGTAAGGCCATATAGAAGTATTACAGGGTCGGAGAGTTCGTTGAGTTTGGATTCGGAAGCTGGCAATGAAATTCCAACTACTTTTCAAGAAGATAATTTTAGGACTCACCGGAGGTCTTCTAACCGGACATTGAGAAGTTTTTCTGTGGATAAAGGGGAAGATAACACAAATTACTCGGATACAGAGGGTTCTTATCCTCGGCATTCCTCGGCACCATCAATTAGTAATGGTACAAAAGGAAATATATACGAGGAAAGAAGAACCAGGAATGGACGAACTGAAAGAAACCTGAAGTCTTCTAAGAGAGAGTTGAAACCGGGAAAAAATGGATTGGATAGAAGACAAAGAGTCCCTGGTCCTCAGGCGCACAATGGAAATACACAGTATGGAAGTGGCAAGGATTTCAGGCGATCCAGGGGTTCACATTCTGAAGTTTATGATATGAGTTTGGAGCAAGATGGGAGTTACAGATTCCAATCAATGAAAAGTCAGTCAACCTGA

mRNA sequence

ATGCCCATTCTCCCAATTTCTCTCGCAATTTCAATCCCTTCTCGTCCGCCCTTATTCTCCTTCTCTCAGTCTCTAACTGGTTCAAACCACCTCTCATACCTTCCCAATCGGATGCCGATCCTCACAAAGACCACACCACTTATTCGTATGGGCGGAGGTCCTAGAACTTATCCCGGTGGAGTGTCGAAGTGGCAATGGAAGCGGATGCAGGCCAAGAAAGGTAAGCAGCTGCTTAAGGCCCGGCTGTGCCGTGAACGCCAGATATACGAGATGCGTAAGCGGGCTGAGCTTAAGGCGGCTGTATCCCAGCTGGAGAGGCCGTGGGAGGTTGTGGAGAAGGCTCCCAATTTGTTCTCTGTTGGCGCCGATGAACAGGTGAAGGTTTTGGCAGATAGGTTTCAAAGGCCTGGTGGGTTCGATTTGTGGACGGAAAGAGATGGGCCTCAATTGTTTGAGACGGTTGACGAACTACCTTCTGCAAGGTTTTTCCCGAAAGGGGTGGTTCACAGTGTAAGGCCATATAGAAGTATTACAGGGTCGGAGAGTTCGTTGAGTTTGGATTCGGAAGCTGGCAATGAAATTCCAACTACTTTTCAAGAAGATAATTTTAGGACTCACCGGAGGTCTTCTAACCGGACATTGAGAAGTTTTTCTGTGGATAAAGGGGAAGATAACACAAATTACTCGGATACAGAGGGTTCTTATCCTCGGCATTCCTCGGCACCATCAATTAGTAATGGTACAAAAGGAAATATATACGAGGAAAGAAGAACCAGGAATGGACGAACTGAAAGAAACCTGAAGTCTTCTAAGAGAGAGTTGAAACCGGGAAAAAATGGATTGGATAGAAGACAAAGAGTCCCTGGTCCTCAGGCGCACAATGGAAATACACAGTATGGAAGTGGCAAGGATTTCAGGCGATCCAGGGGTTCACATTCTGAAGTTTATGATATGAGTTTGGAGCAAGATGGGAGTTACAGATTCCAATCAATGAAAAGTCAGTCAACCTGA

Coding sequence (CDS)

ATGCCCATTCTCCCAATTTCTCTCGCAATTTCAATCCCTTCTCGTCCGCCCTTATTCTCCTTCTCTCAGTCTCTAACTGGTTCAAACCACCTCTCATACCTTCCCAATCGGATGCCGATCCTCACAAAGACCACACCACTTATTCGTATGGGCGGAGGTCCTAGAACTTATCCCGGTGGAGTGTCGAAGTGGCAATGGAAGCGGATGCAGGCCAAGAAAGGTAAGCAGCTGCTTAAGGCCCGGCTGTGCCGTGAACGCCAGATATACGAGATGCGTAAGCGGGCTGAGCTTAAGGCGGCTGTATCCCAGCTGGAGAGGCCGTGGGAGGTTGTGGAGAAGGCTCCCAATTTGTTCTCTGTTGGCGCCGATGAACAGGTGAAGGTTTTGGCAGATAGGTTTCAAAGGCCTGGTGGGTTCGATTTGTGGACGGAAAGAGATGGGCCTCAATTGTTTGAGACGGTTGACGAACTACCTTCTGCAAGGTTTTTCCCGAAAGGGGTGGTTCACAGTGTAAGGCCATATAGAAGTATTACAGGGTCGGAGAGTTCGTTGAGTTTGGATTCGGAAGCTGGCAATGAAATTCCAACTACTTTTCAAGAAGATAATTTTAGGACTCACCGGAGGTCTTCTAACCGGACATTGAGAAGTTTTTCTGTGGATAAAGGGGAAGATAACACAAATTACTCGGATACAGAGGGTTCTTATCCTCGGCATTCCTCGGCACCATCAATTAGTAATGGTACAAAAGGAAATATATACGAGGAAAGAAGAACCAGGAATGGACGAACTGAAAGAAACCTGAAGTCTTCTAAGAGAGAGTTGAAACCGGGAAAAAATGGATTGGATAGAAGACAAAGAGTCCCTGGTCCTCAGGCGCACAATGGAAATACACAGTATGGAAGTGGCAAGGATTTCAGGCGATCCAGGGGTTCACATTCTGAAGTTTATGATATGAGTTTGGAGCAAGATGGGAGTTACAGATTCCAATCAATGAAAAGTCAGTCAACCTGA

Protein sequence

MPILPISLAISIPSRPPLFSFSQSLTGSNHLSYLPNRMPILTKTTPLIRMGGGPRTYPGGVSKWQWKRMQAKKGKQLLKARLCRERQIYEMRKRAELKAAVSQLERPWEVVEKAPNLFSVGADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSARFFPKGVVHSVRPYRSITGSESSLSLDSEAGNEIPTTFQEDNFRTHRRSSNRTLRSFSVDKGEDNTNYSDTEGSYPRHSSAPSISNGTKGNIYEERRTRNGRTERNLKSSKRELKPGKNGLDRRQRVPGPQAHNGNTQYGSGKDFRRSRGSHSEVYDMSLEQDGSYRFQSMKSQST*

Homology

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BLAST of CsaV3_4G025560.1 vs. NCBI nr
Match: XP_011653656.1 (uncharacterized protein LOC101220703 [Cucumis sativus] >KAE8649553.1 hypothetical protein Csa_018140 [Cucumis sativus])

HSP 1 Score: 659.8 bits (1701), Expect = 1.2e-185
Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 0


Query: 1   MPILPISLAISIPSRPPLFSFSQSLTGSNHLSYLPNRMPILTKTTPLIRMGGGPRTYPGG 60
           MPILPISLAISIPSRPPLFSFSQSLTGSNHLSYLPNRMPILTKTTPLIRMGGGPRTYPGG
Sbjct: 1   MPILPISLAISIPSRPPLFSFSQSLTGSNHLSYLPNRMPILTKTTPLIRMGGGPRTYPGG 60

Query: 61  VSKWQWKRMQAKKGKQLLKARLCRERQIYEMRKRAELKAAVSQLERPWEVVEKAPNLFSV 120
           VSKWQWKRMQAKKGKQLLKARLCRERQIYEMRKRAELKAAVSQLERPWEVVEKAPNLFSV
Sbjct: 61  VSKWQWKRMQAKKGKQLLKARLCRERQIYEMRKRAELKAAVSQLERPWEVVEKAPNLFSV 120

Query: 121 GADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSARFFPKGVVHSVRPYRSITGS 180
           GADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSARFFPKGVVHSVRPYRSITGS
Sbjct: 121 GADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSARFFPKGVVHSVRPYRSITGS 180

Query: 181 ESSLSLDSEAGNEIPTTFQEDNFRTHRRSSNRTLRSFSVDKGEDNTNYSDTEGSYPRHSS 240
           ESSLSLDSEAGNEIPTTFQEDNFRTHRRSSNRTLRSFSVDKGEDNTNYSDTEGSYPRHSS
Sbjct: 181 ESSLSLDSEAGNEIPTTFQEDNFRTHRRSSNRTLRSFSVDKGEDNTNYSDTEGSYPRHSS 240

Query: 241 APSISNGTKGNIYEERRTRNGRTERNLKSSKRELKPGKNGLDRRQRVPGPQAHNGNTQYG 300
           APSISNGTKGNIYEERRTRNGRTERNLKSSKRELKPGKNGLDRRQRVPGPQAHNGNTQYG
Sbjct: 241 APSISNGTKGNIYEERRTRNGRTERNLKSSKRELKPGKNGLDRRQRVPGPQAHNGNTQYG 300

Query: 301 SGKDFRRSRGSHSEVYDMSLEQDGSYRFQSMKSQST 337
           SGKDFRRSRGSHSEVYDMSLEQDGSYRFQSMKSQST
Sbjct: 301 SGKDFRRSRGSHSEVYDMSLEQDGSYRFQSMKSQST 336

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BLAST of CsaV3_4G025560.1 vs. NCBI nr
Match: XP_008448454.1 (PREDICTED: uncharacterized protein LOC103490641 [Cucumis melo] >XP_008448464.1 PREDICTED: uncharacterized protein LOC103490641 [Cucumis melo] >XP_008448491.1 PREDICTED: uncharacterized protein LOC103490641 [Cucumis melo] >XP_008448500.1 PREDICTED: uncharacterized protein LOC103490641 [Cucumis melo] >XP_008448509.1 PREDICTED: uncharacterized protein LOC103490641 [Cucumis melo] >XP_008448517.1 PREDICTED: uncharacterized protein LOC103490641 [Cucumis melo] >XP_016900714.1 PREDICTED: uncharacterized protein LOC103490641 [Cucumis melo] >XP_016900716.1 PREDICTED: uncharacterized protein LOC103490641 [Cucumis melo] >XP_016900717.1 PREDICTED: uncharacterized protein LOC103490641 [Cucumis melo] >KAA0045132.1 putative DEAD-box ATP-dependent RNA helicase 33 [Cucumis melo var. makuwa] >TYK23605.1 putative DEAD-box ATP-dependent RNA helicase 33 [Cucumis melo var. makuwa])

HSP 1 Score: 592.8 bits (1527), Expect = 1.8e-165
Identity = 311/339 (91.74%), Postives = 314/339 (92.63%), Query Frame = 0


Query: 1   MPILPISLAISIPSRPPLFSFSQSLTGSNHLSYLPNRMPILTKTTPLIRMGGGPRTYPGG 60
           MPIL  SL ISIP RPPLFSFSQSLTGSNHLSYLPNRMPI+TKTT LIRMGGGPRTYPGG
Sbjct: 1   MPILQTSLPISIPLRPPLFSFSQSLTGSNHLSYLPNRMPIVTKTTTLIRMGGGPRTYPGG 60

Query: 61  VSKWQWKRMQAKKGKQLLKARLCRERQIYEMRKRAELKAAVSQLERPWEVVEKAPNLFSV 120
           VSKWQWKRMQAKK KQLLKARLCRERQIYEMRKRAELKAAVS+LERPWEVVEKAPNLFSV
Sbjct: 61  VSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWEVVEKAPNLFSV 120

Query: 121 GADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSARFFPKGVVHSVRPYRSITGS 180
           GADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSARFFPKGVVHSVRPYRSIT S
Sbjct: 121 GADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSARFFPKGVVHSVRPYRSITAS 180

Query: 181 ESSLSLDSEAGNEIPTTFQEDNFRTHRRSSNRTLRSFSVDKGEDNTN---YSDTEGSYPR 240
           ESSLSLDSE GNEI  +FQEDNFRTHRRSSNR LRSFSVDK EDNTN   YSDTEGSYPR
Sbjct: 181 ESSLSLDSEVGNEIAASFQEDNFRTHRRSSNRKLRSFSVDKEEDNTNYSDYSDTEGSYPR 240

Query: 241 HSSAPSISNGTKGNIYEERRTRNGRTERNLKSSKRELKPGKNGLDRRQRVPGPQAHNGNT 300
           HSSAPS SNGTKGNIYEE RTRN RTERNLK SKR L PGKNGLDRRQRVPG QAHNGNT
Sbjct: 241 HSSAPSNSNGTKGNIYEE-RTRNRRTERNLKPSKRGLNPGKNGLDRRQRVPGFQAHNGNT 300

Query: 301 QYGSGKDFRRSRGSHSEVYDMSLEQDGSYRFQSMKSQST 337
           QYG GKD RRSRGSHSEVYDMSLEQDGSYRFQ MKSQST
Sbjct: 301 QYGRGKDIRRSRGSHSEVYDMSLEQDGSYRFQPMKSQST 338

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BLAST of CsaV3_4G025560.1 vs. NCBI nr
Match: XP_038883722.1 (uncharacterized protein LOC120074621 [Benincasa hispida] >XP_038883723.1 uncharacterized protein LOC120074621 [Benincasa hispida] >XP_038883724.1 uncharacterized protein LOC120074621 [Benincasa hispida] >XP_038883725.1 uncharacterized protein LOC120074621 [Benincasa hispida] >XP_038883726.1 uncharacterized protein LOC120074621 [Benincasa hispida])

HSP 1 Score: 536.6 bits (1381), Expect = 1.6e-148
Identity = 281/339 (82.89%), Postives = 302/339 (89.09%), Query Frame = 0


Query: 1   MPILPISLAISIPSRPPLFSFSQSLTGSNHLSYLPNRMPILTKTTPLIRMGGGPRTYPGG 60
           MPILPISLAI  P RPPLFSFSQSLTGSNHL Y PNRMPI++K+T LIRMGGGPRTYPGG
Sbjct: 1   MPILPISLAIPNPLRPPLFSFSQSLTGSNHLFYFPNRMPIVSKSTTLIRMGGGPRTYPGG 60

Query: 61  VSKWQWKRMQAKKGKQLLKARLCRERQIYEMRKRAELKAAVSQLERPWEVVEKAPNLFSV 120
           VSKWQWKRMQAKK KQLLKARLCRERQIYEMRKRAELKAAV++LERPWEVVE+APNLFSV
Sbjct: 61  VSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVAELERPWEVVERAPNLFSV 120

Query: 121 GADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSARFFPKGVVHSVRPYRSITGS 180
           GADEQVKVLADRFQRPGGFDLWTE+DGPQLF+TVDELPSARFFPKGVVHSVRPYRSITGS
Sbjct: 121 GADEQVKVLADRFQRPGGFDLWTEKDGPQLFQTVDELPSARFFPKGVVHSVRPYRSITGS 180

Query: 181 ESSLSLDSEAGNEIPTTFQEDNFRTHRRSSNRTLRSFSVDKGEDNT---NYSDTEGSYPR 240
           ESSLSLD+EAGNEI T+FQED+F+THRRSSNR LRS  V+KGE N+   +YS+TE SYP+
Sbjct: 181 ESSLSLDAEAGNEIATSFQEDDFKTHRRSSNRKLRSAPVNKGEVNSDYPDYSNTEDSYPK 240

Query: 241 HSSAPSISNGTKGNIYEERRTRNGRTERNLKSSKRELKPGKNGLDRRQRVPGPQAHNGNT 300
            S  PS SNG  GN+Y E  TRN  TERNLKSSKREL PG+ GLDRRQRVPG QAHN NT
Sbjct: 241 RSLVPSSSNGKNGNVY-EGGTRNRGTERNLKSSKRELNPGQIGLDRRQRVPGSQAHNSNT 300

Query: 301 QYGSGKDFRRSRGSHSEVYDMSLEQDGSYRFQSMKSQST 337
           QYG  KD RRS+ SHSEVYDMSLE DGSYRFQ MKS+ST
Sbjct: 301 QYGRRKDSRRSKSSHSEVYDMSLEHDGSYRFQPMKSRST 338

[Close]

BLAST of CsaV3_4G025560.1 vs. NCBI nr
Match: XP_022151570.1 (uncharacterized protein LOC111019483 [Momordica charantia] >XP_022151571.1 uncharacterized protein LOC111019483 [Momordica charantia] >XP_022151572.1 uncharacterized protein LOC111019483 [Momordica charantia] >XP_022151573.1 uncharacterized protein LOC111019483 [Momordica charantia] >XP_022151574.1 uncharacterized protein LOC111019483 [Momordica charantia] >XP_022151575.1 uncharacterized protein LOC111019483 [Momordica charantia] >XP_022151576.1 uncharacterized protein LOC111019483 [Momordica charantia] >XP_022151577.1 uncharacterized protein LOC111019483 [Momordica charantia])

HSP 1 Score: 485.7 bits (1249), Expect = 3.2e-133
Identity = 261/338 (77.22%), Postives = 284/338 (84.02%), Query Frame = 0


Query: 1   MPILPISLAISIPSRPPLFSFSQSLTGSNHLSYLPNRMPILTKTTPLIRMGGGPRTYPGG 60
           MPI  ISLAI  P RP LFSFSQSL G NHLSYLPNR+PI T+ T LIRMGGGPRT+PGG
Sbjct: 1   MPIFSISLAIPNPPRPLLFSFSQSLNGPNHLSYLPNRIPIATRITTLIRMGGGPRTFPGG 60

Query: 61  VSKWQWKRMQAKKGKQLLKARLCRERQIYEMRKRAELKAAVSQLERPWEVVEKAPNLFSV 120
           VSKWQWKRMQAKK KQLLKARLCRERQIYEMRKRAELKAAVS+LERPWEVVEKAPNLFSV
Sbjct: 61  VSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWEVVEKAPNLFSV 120

Query: 121 GADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSARFFPKGVVHSVRPYRSITGS 180
            ADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSARFFPKGVVHSV+PYRSITGS
Sbjct: 121 SADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSARFFPKGVVHSVKPYRSITGS 180

Query: 181 ESSLSLDSEAGNEIPTTFQEDNFRTHRRSSNRTLRSFSVDKGEDNTNYSDTEGSYPRHSS 240
           E SLSLDSEAGNEI T F+E ++ T+RRSSNR LRS SV +GED+   S+TE SYP ++ 
Sbjct: 181 EDSLSLDSEAGNEIATGFREGDYETYRRSSNRILRSGSVSEGEDD---SETEDSYPTNAL 240

Query: 241 APSISNGTKGNIYEERRTRNGRTERNLKSSK----RELKPGKNGLDRRQRVPGPQAHNGN 300
           APS SNG KG  Y + R RN    RNL+SSK     +  PG+ GLDRR+R+PGPQ HNG+
Sbjct: 241 APSSSNGGKGKTY-DGRFRNRGNGRNLESSKAFGSTKSNPGQIGLDRRKRIPGPQVHNGS 300

Query: 301 TQYGSGKDFRRSRGSHSEVYDMSLEQDGSYRFQSMKSQ 335
            QYG GK  RRS  SHSEVYDM+LEQDGSYRFQ MKS+
Sbjct: 301 RQYGRGKGSRRSGSSHSEVYDMNLEQDGSYRFQPMKSR 334

[Close]

BLAST of CsaV3_4G025560.1 vs. NCBI nr
Match: XP_022966589.1 (uncharacterized protein LOC111466226 [Cucurbita maxima] >XP_022966590.1 uncharacterized protein LOC111466226 [Cucurbita maxima] >XP_022966591.1 uncharacterized protein LOC111466226 [Cucurbita maxima] >XP_022966592.1 uncharacterized protein LOC111466226 [Cucurbita maxima] >XP_022966593.1 uncharacterized protein LOC111466226 [Cucurbita maxima] >XP_022966594.1 uncharacterized protein LOC111466226 [Cucurbita maxima])

HSP 1 Score: 461.5 bits (1186), Expect = 6.4e-126
Identity = 266/418 (63.64%), Postives = 286/418 (68.42%), Query Frame = 0


Query: 1   MPILPISLAISIPSR-PPLFSFSQSLTGSNHLSYLPNRMPILTKTTPLIRMGGGPRTYPG 60
           MPI PISLAIS P R PPLFSFSQS+TGSN L Y PN +   TK T LIRMGGGPRTYPG
Sbjct: 1   MPIFPISLAISNPPRPPPLFSFSQSITGSNRLLYFPNGIRTATKITTLIRMGGGPRTYPG 60

Query: 61  GVSKWQWKRMQAKKGKQLLKARLCRERQIYEMRKRAELKAAVSQLERPWEVVEKAPNLFS 120
           GVSKWQWKRMQAKK KQLLKARLCRERQIYEMRKRAELKAAVS+LERPWEVVEKAPNLFS
Sbjct: 61  GVSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWEVVEKAPNLFS 120

Query: 121 VGADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSARFFPKGVVHSVRPYRSITG 180
           VGADEQVKVLADRFQRPGGFDLWTE+DGPQLFETVDELPSARFFPKGVVHSV+PYRSITG
Sbjct: 121 VGADEQVKVLADRFQRPGGFDLWTEKDGPQLFETVDELPSARFFPKGVVHSVKPYRSITG 180

Query: 181 SESSLSLDSEAGNEIPTTFQEDNFRTHRRSSNRTLRSFSVDKGEDNTNYSDTEGSYPRHS 240
           SE S SLDSE GNEI T+FQED+ +T RRSSNR LR  SV + + N+NYSD    YPR S
Sbjct: 181 SEGSSSLDSEDGNEIGTSFQEDDLKTPRRSSNRKLRIGSVSEEKANSNYSD---YYPRSS 240

Query: 241 SAPSISNGTKGNIYE--------------------------------------------- 300
           S PS SNG KG  YE                                             
Sbjct: 241 SVPSSSNGQKGKTYEGKFRNREKGRNLQSSKRSSSLGSEAGNGIETRFQVDDFKTYRRSS 300

Query: 301 ERRTRNGRTE-------------------------------------RNLKSSKRELKPG 336
            R+ R+G                                        RNL+SSKREL  G
Sbjct: 301 NRKLRSGSVSEGEANSDYSDTEDYYLKSSMVPSSSNNGRKFGSRENGRNLESSKRELNSG 360

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BLAST of CsaV3_4G025560.1 vs. ExPASy Swiss-Prot
Match: Q9C8S9 (Probable DEAD-box ATP-dependent RNA helicase 48 OS=Arabidopsis thaliana OX=3702 GN=RH48 PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 7.4e-16
Identity = 44/100 (44.00%), Postives = 59/100 (59.00%), Query Frame = 0


Query: 50  MGGGPRTYPGGVSKWQWKRMQAKKGKQLLKARLCRERQIYEMRKRAELKAAVSQLERPWE 109
           MGGGPRT+PGG++KWQWKRM  KK ++     L +E+Q+YE R R E++A +       E
Sbjct: 26  MGGGPRTFPGGLNKWQWKRMHEKKAREKENKLLDQEKQLYEARIRTEIRAKMWGNPDSGE 85

Query: 110 VVEKAPNLFS-VGADEQVKVLADRFQRPGGFDLWTERDGP 149
              K+      +   E +K LADRF + G  D W E DGP
Sbjct: 86  KTAKSKQSHGPMSPKEHIKTLADRFMKAGAEDFWNENDGP 125

[Close]

BLAST of CsaV3_4G025560.1 vs. ExPASy Swiss-Prot
Match: O80792 (Putative DEAD-box ATP-dependent RNA helicase 33 OS=Arabidopsis thaliana OX=3702 GN=RH33 PE=3 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 9.6e-16
Identity = 44/100 (44.00%), Postives = 59/100 (59.00%), Query Frame = 0


Query: 50  MGGGPRTYPGGVSKWQWKRMQAKKGKQLLKARLCRERQIYEMRKRAELKAAVSQLERPWE 109
           MGGGPRT+PGG++KWQWKRM  KK ++     L +E+Q+YE R R E++A +       E
Sbjct: 76  MGGGPRTFPGGLNKWQWKRMHEKKAREKENKLLDQEKQLYEARIRTEIRAKMWGHPDSGE 135

Query: 110 VVEKAPNLFS-VGADEQVKVLADRFQRPGGFDLWTERDGP 149
              K       +   E +K LADRF + G  DLW + DGP
Sbjct: 136 KTAKLKQSHGPMSPKEHIKTLADRFMKAGADDLWNDNDGP 175

[Close]

BLAST of CsaV3_4G025560.1 vs. ExPASy Swiss-Prot
Match: Q6K7R9 (DEAD-box ATP-dependent RNA helicase 48 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0826100 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.9e-11
Identity = 42/108 (38.89%), Postives = 57/108 (52.78%), Query Frame = 0


Query: 50  MGGGPRTYPGGVSKWQWKRMQAKKGKQLLKARLCRERQIYEMRKRAELKAAVSQLERPWE 109
           MGGGPRT+PGG+SKWQ KRM  K  +   +  L  E+Q+Y  R R+E++A+         
Sbjct: 1   MGGGPRTFPGGLSKWQHKRMHEKLARHKERGLLRHEKQLYLARLRSEIRAS--------- 60

Query: 110 VVEKAPNLFSVGADE---------QVKVLADRFQRPGGFDLWTERDGP 149
              + P   +   D+          ++ LADRF  PG  DLW E DGP
Sbjct: 61  ---RLPAAGASPPDDGDGPTSSRAHIRALADRFLLPGAEDLWNEDDGP 96

[Close]

BLAST of CsaV3_4G025560.1 vs. ExPASy TrEMBL
Match: A0A0A0L2E2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G303050 PE=4 SV=1)

HSP 1 Score: 653.3 bits (1684), Expect = 5.6e-184
Identity = 332/332 (100.00%), Postives = 332/332 (100.00%), Query Frame = 0


Query: 1   MPILPISLAISIPSRPPLFSFSQSLTGSNHLSYLPNRMPILTKTTPLIRMGGGPRTYPGG 60
           MPILPISLAISIPSRPPLFSFSQSLTGSNHLSYLPNRMPILTKTTPLIRMGGGPRTYPGG
Sbjct: 1   MPILPISLAISIPSRPPLFSFSQSLTGSNHLSYLPNRMPILTKTTPLIRMGGGPRTYPGG 60

Query: 61  VSKWQWKRMQAKKGKQLLKARLCRERQIYEMRKRAELKAAVSQLERPWEVVEKAPNLFSV 120
           VSKWQWKRMQAKKGKQLLKARLCRERQIYEMRKRAELKAAVSQLERPWEVVEKAPNLFSV
Sbjct: 61  VSKWQWKRMQAKKGKQLLKARLCRERQIYEMRKRAELKAAVSQLERPWEVVEKAPNLFSV 120

Query: 121 GADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSARFFPKGVVHSVRPYRSITGS 180
           GADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSARFFPKGVVHSVRPYRSITGS
Sbjct: 121 GADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSARFFPKGVVHSVRPYRSITGS 180

Query: 181 ESSLSLDSEAGNEIPTTFQEDNFRTHRRSSNRTLRSFSVDKGEDNTNYSDTEGSYPRHSS 240
           ESSLSLDSEAGNEIPTTFQEDNFRTHRRSSNRTLRSFSVDKGEDNTNYSDTEGSYPRHSS
Sbjct: 181 ESSLSLDSEAGNEIPTTFQEDNFRTHRRSSNRTLRSFSVDKGEDNTNYSDTEGSYPRHSS 240

Query: 241 APSISNGTKGNIYEERRTRNGRTERNLKSSKRELKPGKNGLDRRQRVPGPQAHNGNTQYG 300
           APSISNGTKGNIYEERRTRNGRTERNLKSSKRELKPGKNGLDRRQRVPGPQAHNGNTQYG
Sbjct: 241 APSISNGTKGNIYEERRTRNGRTERNLKSSKRELKPGKNGLDRRQRVPGPQAHNGNTQYG 300

Query: 301 SGKDFRRSRGSHSEVYDMSLEQDGSYRFQSMK 333
           SGKDFRRSRGSHSEVYDMSLEQDGSYRFQSMK
Sbjct: 301 SGKDFRRSRGSHSEVYDMSLEQDGSYRFQSMK 332

[Close]

BLAST of CsaV3_4G025560.1 vs. ExPASy TrEMBL
Match: A0A1S3BKN8 (uncharacterized protein LOC103490641 OS=Cucumis melo OX=3656 GN=LOC103490641 PE=4 SV=1)

HSP 1 Score: 592.8 bits (1527), Expect = 8.9e-166
Identity = 311/339 (91.74%), Postives = 314/339 (92.63%), Query Frame = 0


Query: 1   MPILPISLAISIPSRPPLFSFSQSLTGSNHLSYLPNRMPILTKTTPLIRMGGGPRTYPGG 60
           MPIL  SL ISIP RPPLFSFSQSLTGSNHLSYLPNRMPI+TKTT LIRMGGGPRTYPGG
Sbjct: 1   MPILQTSLPISIPLRPPLFSFSQSLTGSNHLSYLPNRMPIVTKTTTLIRMGGGPRTYPGG 60

Query: 61  VSKWQWKRMQAKKGKQLLKARLCRERQIYEMRKRAELKAAVSQLERPWEVVEKAPNLFSV 120
           VSKWQWKRMQAKK KQLLKARLCRERQIYEMRKRAELKAAVS+LERPWEVVEKAPNLFSV
Sbjct: 61  VSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWEVVEKAPNLFSV 120

Query: 121 GADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSARFFPKGVVHSVRPYRSITGS 180
           GADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSARFFPKGVVHSVRPYRSIT S
Sbjct: 121 GADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSARFFPKGVVHSVRPYRSITAS 180

Query: 181 ESSLSLDSEAGNEIPTTFQEDNFRTHRRSSNRTLRSFSVDKGEDNTN---YSDTEGSYPR 240
           ESSLSLDSE GNEI  +FQEDNFRTHRRSSNR LRSFSVDK EDNTN   YSDTEGSYPR
Sbjct: 181 ESSLSLDSEVGNEIAASFQEDNFRTHRRSSNRKLRSFSVDKEEDNTNYSDYSDTEGSYPR 240

Query: 241 HSSAPSISNGTKGNIYEERRTRNGRTERNLKSSKRELKPGKNGLDRRQRVPGPQAHNGNT 300
           HSSAPS SNGTKGNIYEE RTRN RTERNLK SKR L PGKNGLDRRQRVPG QAHNGNT
Sbjct: 241 HSSAPSNSNGTKGNIYEE-RTRNRRTERNLKPSKRGLNPGKNGLDRRQRVPGFQAHNGNT 300

Query: 301 QYGSGKDFRRSRGSHSEVYDMSLEQDGSYRFQSMKSQST 337
           QYG GKD RRSRGSHSEVYDMSLEQDGSYRFQ MKSQST
Sbjct: 301 QYGRGKDIRRSRGSHSEVYDMSLEQDGSYRFQPMKSQST 338

[Close]

BLAST of CsaV3_4G025560.1 vs. ExPASy TrEMBL
Match: A0A5A7TP38 (Putative DEAD-box ATP-dependent RNA helicase 33 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G001170 PE=4 SV=1)

HSP 1 Score: 592.8 bits (1527), Expect = 8.9e-166
Identity = 311/339 (91.74%), Postives = 314/339 (92.63%), Query Frame = 0


Query: 1   MPILPISLAISIPSRPPLFSFSQSLTGSNHLSYLPNRMPILTKTTPLIRMGGGPRTYPGG 60
           MPIL  SL ISIP RPPLFSFSQSLTGSNHLSYLPNRMPI+TKTT LIRMGGGPRTYPGG
Sbjct: 1   MPILQTSLPISIPLRPPLFSFSQSLTGSNHLSYLPNRMPIVTKTTTLIRMGGGPRTYPGG 60

Query: 61  VSKWQWKRMQAKKGKQLLKARLCRERQIYEMRKRAELKAAVSQLERPWEVVEKAPNLFSV 120
           VSKWQWKRMQAKK KQLLKARLCRERQIYEMRKRAELKAAVS+LERPWEVVEKAPNLFSV
Sbjct: 61  VSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWEVVEKAPNLFSV 120

Query: 121 GADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSARFFPKGVVHSVRPYRSITGS 180
           GADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSARFFPKGVVHSVRPYRSIT S
Sbjct: 121 GADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSARFFPKGVVHSVRPYRSITAS 180

Query: 181 ESSLSLDSEAGNEIPTTFQEDNFRTHRRSSNRTLRSFSVDKGEDNTN---YSDTEGSYPR 240
           ESSLSLDSE GNEI  +FQEDNFRTHRRSSNR LRSFSVDK EDNTN   YSDTEGSYPR
Sbjct: 181 ESSLSLDSEVGNEIAASFQEDNFRTHRRSSNRKLRSFSVDKEEDNTNYSDYSDTEGSYPR 240

Query: 241 HSSAPSISNGTKGNIYEERRTRNGRTERNLKSSKRELKPGKNGLDRRQRVPGPQAHNGNT 300
           HSSAPS SNGTKGNIYEE RTRN RTERNLK SKR L PGKNGLDRRQRVPG QAHNGNT
Sbjct: 241 HSSAPSNSNGTKGNIYEE-RTRNRRTERNLKPSKRGLNPGKNGLDRRQRVPGFQAHNGNT 300

Query: 301 QYGSGKDFRRSRGSHSEVYDMSLEQDGSYRFQSMKSQST 337
           QYG GKD RRSRGSHSEVYDMSLEQDGSYRFQ MKSQST
Sbjct: 301 QYGRGKDIRRSRGSHSEVYDMSLEQDGSYRFQPMKSQST 338

[Close]

BLAST of CsaV3_4G025560.1 vs. ExPASy TrEMBL
Match: A0A6J1DBJ9 (uncharacterized protein LOC111019483 OS=Momordica charantia OX=3673 GN=LOC111019483 PE=4 SV=1)

HSP 1 Score: 485.7 bits (1249), Expect = 1.5e-133
Identity = 261/338 (77.22%), Postives = 284/338 (84.02%), Query Frame = 0


Query: 1   MPILPISLAISIPSRPPLFSFSQSLTGSNHLSYLPNRMPILTKTTPLIRMGGGPRTYPGG 60
           MPI  ISLAI  P RP LFSFSQSL G NHLSYLPNR+PI T+ T LIRMGGGPRT+PGG
Sbjct: 1   MPIFSISLAIPNPPRPLLFSFSQSLNGPNHLSYLPNRIPIATRITTLIRMGGGPRTFPGG 60

Query: 61  VSKWQWKRMQAKKGKQLLKARLCRERQIYEMRKRAELKAAVSQLERPWEVVEKAPNLFSV 120
           VSKWQWKRMQAKK KQLLKARLCRERQIYEMRKRAELKAAVS+LERPWEVVEKAPNLFSV
Sbjct: 61  VSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWEVVEKAPNLFSV 120

Query: 121 GADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSARFFPKGVVHSVRPYRSITGS 180
            ADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSARFFPKGVVHSV+PYRSITGS
Sbjct: 121 SADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSARFFPKGVVHSVKPYRSITGS 180

Query: 181 ESSLSLDSEAGNEIPTTFQEDNFRTHRRSSNRTLRSFSVDKGEDNTNYSDTEGSYPRHSS 240
           E SLSLDSEAGNEI T F+E ++ T+RRSSNR LRS SV +GED+   S+TE SYP ++ 
Sbjct: 181 EDSLSLDSEAGNEIATGFREGDYETYRRSSNRILRSGSVSEGEDD---SETEDSYPTNAL 240

Query: 241 APSISNGTKGNIYEERRTRNGRTERNLKSSK----RELKPGKNGLDRRQRVPGPQAHNGN 300
           APS SNG KG  Y + R RN    RNL+SSK     +  PG+ GLDRR+R+PGPQ HNG+
Sbjct: 241 APSSSNGGKGKTY-DGRFRNRGNGRNLESSKAFGSTKSNPGQIGLDRRKRIPGPQVHNGS 300

Query: 301 TQYGSGKDFRRSRGSHSEVYDMSLEQDGSYRFQSMKSQ 335
            QYG GK  RRS  SHSEVYDM+LEQDGSYRFQ MKS+
Sbjct: 301 RQYGRGKGSRRSGSSHSEVYDMNLEQDGSYRFQPMKSR 334

[Close]

BLAST of CsaV3_4G025560.1 vs. ExPASy TrEMBL
Match: A0A6J1HU81 (uncharacterized protein LOC111466226 OS=Cucurbita maxima OX=3661 GN=LOC111466226 PE=4 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 3.1e-126
Identity = 266/418 (63.64%), Postives = 286/418 (68.42%), Query Frame = 0


Query: 1   MPILPISLAISIPSR-PPLFSFSQSLTGSNHLSYLPNRMPILTKTTPLIRMGGGPRTYPG 60
           MPI PISLAIS P R PPLFSFSQS+TGSN L Y PN +   TK T LIRMGGGPRTYPG
Sbjct: 1   MPIFPISLAISNPPRPPPLFSFSQSITGSNRLLYFPNGIRTATKITTLIRMGGGPRTYPG 60

Query: 61  GVSKWQWKRMQAKKGKQLLKARLCRERQIYEMRKRAELKAAVSQLERPWEVVEKAPNLFS 120
           GVSKWQWKRMQAKK KQLLKARLCRERQIYEMRKRAELKAAVS+LERPWEVVEKAPNLFS
Sbjct: 61  GVSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWEVVEKAPNLFS 120

Query: 121 VGADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSARFFPKGVVHSVRPYRSITG 180
           VGADEQVKVLADRFQRPGGFDLWTE+DGPQLFETVDELPSARFFPKGVVHSV+PYRSITG
Sbjct: 121 VGADEQVKVLADRFQRPGGFDLWTEKDGPQLFETVDELPSARFFPKGVVHSVKPYRSITG 180

Query: 181 SESSLSLDSEAGNEIPTTFQEDNFRTHRRSSNRTLRSFSVDKGEDNTNYSDTEGSYPRHS 240
           SE S SLDSE GNEI T+FQED+ +T RRSSNR LR  SV + + N+NYSD    YPR S
Sbjct: 181 SEGSSSLDSEDGNEIGTSFQEDDLKTPRRSSNRKLRIGSVSEEKANSNYSD---YYPRSS 240

Query: 241 SAPSISNGTKGNIYE--------------------------------------------- 300
           S PS SNG KG  YE                                             
Sbjct: 241 SVPSSSNGQKGKTYEGKFRNREKGRNLQSSKRSSSLGSEAGNGIETRFQVDDFKTYRRSS 300

Query: 301 ERRTRNGRTE-------------------------------------RNLKSSKRELKPG 336
            R+ R+G                                        RNL+SSKREL  G
Sbjct: 301 NRKLRSGSVSEGEANSDYSDTEDYYLKSSMVPSSSNNGRKFGSRENGRNLESSKRELNSG 360

[Close]

BLAST of CsaV3_4G025560.1 vs. TAIR 10
Match: AT2G37920.1 (copper ion transmembrane transporters )

HSP 1 Score: 242.7 bits (618), Expect = 4.4e-64
Identity = 119/162 (73.46%), Postives = 136/162 (83.95%), Query Frame = 0


Query: 39  PILTKTTPLIRMGGGPRTYPGGVSKWQWKRMQAKKGKQLLKARLCRERQIYEMRKRAELK 98
           P   + + +IRMGGGPRT+PGGVSKWQWKRMQAKK KQLLKARLCRERQIYEMRKRAELK
Sbjct: 39  PTQPRKSTVIRMGGGPRTFPGGVSKWQWKRMQAKKQKQLLKARLCRERQIYEMRKRAELK 98

Query: 99  AAVSQLERPWEVVEKAPNLFSVGADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELP 158
           AAV++LERPWE + K PNLFSV ADEQVKVLADRFQ+PGGFDLWT+RDGPQLFE+VD+LP
Sbjct: 99  AAVAELERPWEPIHKPPNLFSVCADEQVKVLADRFQKPGGFDLWTDRDGPQLFESVDDLP 158

Query: 159 SARFFPKGVVHSVRPYRSITGS------ESSLSLDSEAGNEI 195
           SARFFPKGVVHSV+PY  ++ S      + S   D E G ++
Sbjct: 159 SARFFPKGVVHSVKPYGRLSSSSVVDDGDESEVKDEEIGKKL 200

[Close]

BLAST of CsaV3_4G025560.1 vs. TAIR 10
Match: AT1G63250.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 86.3 bits (212), Expect = 5.2e-17
Identity = 44/100 (44.00%), Postives = 59/100 (59.00%), Query Frame = 0


Query: 50  MGGGPRTYPGGVSKWQWKRMQAKKGKQLLKARLCRERQIYEMRKRAELKAAVSQLERPWE 109
           MGGGPRT+PGG++KWQWKRM  KK ++     L +E+Q+YE R R E++A +       E
Sbjct: 26  MGGGPRTFPGGLNKWQWKRMHEKKAREKENKLLDQEKQLYEARIRTEIRAKMWGNPDSGE 85

Query: 110 VVEKAPNLFS-VGADEQVKVLADRFQRPGGFDLWTERDGP 149
              K+      +   E +K LADRF + G  D W E DGP
Sbjct: 86  KTAKSKQSHGPMSPKEHIKTLADRFMKAGAEDFWNENDGP 125

[Close]

BLAST of CsaV3_4G025560.1 vs. TAIR 10
Match: AT2G07750.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 85.9 bits (211), Expect = 6.8e-17
Identity = 44/100 (44.00%), Postives = 59/100 (59.00%), Query Frame = 0


Query: 50  MGGGPRTYPGGVSKWQWKRMQAKKGKQLLKARLCRERQIYEMRKRAELKAAVSQLERPWE 109
           MGGGPRT+PGG++KWQWKRM  KK ++     L +E+Q+YE R R E++A +       E
Sbjct: 76  MGGGPRTFPGGLNKWQWKRMHEKKAREKENKLLDQEKQLYEARIRTEIRAKMWGHPDSGE 135

Query: 110 VVEKAPNLFS-VGADEQVKVLADRFQRPGGFDLWTERDGP 149
              K       +   E +K LADRF + G  DLW + DGP
Sbjct: 136 KTAKLKQSHGPMSPKEHIKTLADRFMKAGADDLWNDNDGP 175

The following BLAST results are available for this feature:

BLAST of CsaV3_4G025560.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653656.1	1.2e-185	100.00	uncharacterized protein LOC101220703 [Cucumis sativus] >KAE8649553.1 hypothetica...	[more]
XP_008448454.1	1.8e-165	91.74	PREDICTED: uncharacterized protein LOC103490641 [Cucumis melo] >XP_008448464.1 P...	[more]
XP_038883722.1	1.6e-148	82.89	uncharacterized protein LOC120074621 [Benincasa hispida] >XP_038883723.1 unchara...	[more]
XP_022151570.1	3.2e-133	77.22	uncharacterized protein LOC111019483 [Momordica charantia] >XP_022151571.1 uncha...	[more]
XP_022966589.1	6.4e-126	63.64	uncharacterized protein LOC111466226 [Cucurbita maxima] >XP_022966590.1 uncharac...	[more]

BLAST of CsaV3_4G025560.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C8S9	7.4e-16	44.00	Probable DEAD-box ATP-dependent RNA helicase 48 OS=Arabidopsis thaliana OX=3702 ...	[more]
O80792	9.6e-16	44.00	Putative DEAD-box ATP-dependent RNA helicase 33 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q6K7R9	1.9e-11	38.89	DEAD-box ATP-dependent RNA helicase 48 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]

BLAST of CsaV3_4G025560.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2E2	5.6e-184	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G303050 PE=4 SV=1	[more]
A0A1S3BKN8	8.9e-166	91.74	uncharacterized protein LOC103490641 OS=Cucumis melo OX=3656 GN=LOC103490641 PE=...	[more]
A0A5A7TP38	8.9e-166	91.74	Putative DEAD-box ATP-dependent RNA helicase 33 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A6J1DBJ9	1.5e-133	77.22	uncharacterized protein LOC111019483 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6J1HU81	3.1e-126	63.64	uncharacterized protein LOC111466226 OS=Cucurbita maxima OX=3661 GN=LOC111466226...	[more]

BLAST of CsaV3_4G025560.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37920.1	4.4e-64	73.46	copper ion transmembrane transporters	[more]
AT1G63250.1	5.2e-17	44.00	DEA(D/H)-box RNA helicase family protein	[more]
AT2G07750.1	6.8e-17	44.00	DEA(D/H)-box RNA helicase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 290..304
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 220..251
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 195..336
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 200..219
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 252..282
None	No IPR available	PANTHER	PTHR37724:SF1	OS02G0564300 PROTEIN	coord: 1..334
None	No IPR available	PANTHER	PTHR37724	OS02G0564300 PROTEIN	coord: 1..334

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_4G025560	CsaV3_4G025560	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_4G025560.1.exon1	CsaV3_4G025560.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_4G025560.1.cds1	CsaV3_4G025560.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_4G025560.1	CsaV3_4G025560.1-protein	polypeptide