CsaV3_3G028660.1 (mRNA) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G028660.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	S-protein homolog
Location	chr3: 25228213 .. 25229438 (-)
Sequence length	504
RNA-Seq Expression	CsaV3_3G028660.1
Synteny	CsaV3_3G028660.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGATGATCATGAATCTCAAGCATTGCAAGGGCTTACTAGTTTTGGTTATAACATCATTATTGATTGTTATTCAAACAAGCGATGGAGCTCCATTGGAGCATTGGGCAGTGCAAGTAAAGAATGAAATGCAAGGGCAAAGCTTACTTCTTCATTGCAAGTCGAAAGACGATGATTTTGGAAAGCAAATTTTAAAACAAGGGCAATCATTTTCTTGGAAATTTAGAGAAAATCTATGGCAAAACACACTTTATTGGTGTTACATGAGCAATGATCACAATCACGTGTCATTAGAAGTGTTTTGGCCAGAAGCAGCGTCTAAACCGTATCTTTCTTACCGATGCAGAGATAATGTATGCTATTGGTCAGCAAGAAATGATGGAATTTACATCTATAATGTTCCTGAAAATAAGTTTGAGTTGCATACTAAATGGTTGCCTGGTTTGTAGGGTTATATGTGTGGATAGAAAGTAAAGAATTACTTTTCCATCACAATACTGTAATAAATAAGGACATGTTTGGATTTGAAACAATATTGTTTCACACAGTTATGAAAATAATTTAGATACCGTTTGTTGACGTTCTAGCTTTCCTGTTTGTTTCTTGTTTCTCGTTTCTTATTTTTTGAGAACTAGAAACAAGAATATGATTGATAATTATTTTTGTATCTCGTTTCTTGAAAAAAAAAACAAAAACATGTTTGATAATCATTTTTTGTTGGTCTAAATTTTTTTATCATTTTATAGTTTGAGTTTGAAAATTAATTTCTATGTGTATATATAATGCATTAAAATATAAAAAGTATGATTATAAAACATCTAATTTTTTTTAGAACAAAACATTTACATTATTGAATACACATAAGTTTGAAGCAATATTAATAAGTAGGATATAATTGTTTTTATCATTCATATGTTCTAAAAATTCATGTGCAACATTATTTTTCACTGATATCATTTGTCTCATTCTTGACTCAAATCAAACATAATTATATTGGATTTCACATAATAATATTATATTATGAAGAAGTCTACATATACAATATCAAAGTGATTTAATTAATTAAATTAATGTCTTAGTAAACAAAATTAAAATAATATAATATGTAAACCTAGTCTTGGAGTAATAACTATGGATTTTCTTACTCTTTACTTTTCTTATAGCTTATAGAATGGTTGAGAAGTCGCATTTGGGTTGTTTGCTTTTGACTAGATCGGAAGAATAG

mRNA sequence

ATGATGATGATCATGAATCTCAAGCATTGCAAGGGCTTACTAGTTTTGGTTATAACATCATTATTGATTGTTATTCAAACAAGCGATGGAGCTCCATTGGAGCATTGGGCAGTGCAAGTAAAGAATGAAATGCAAGGGCAAAGCTTACTTCTTCATTGCAAGTCGAAAGACGATGATTTTGGAAAGCAAATTTTAAAACAAGGGCAATCATTTTCTTGGAAATTTAGAGAAAATCTATGGCAAAACACACTTTATTGGTGTTACATGAGCAATGATCACAATCACGTGTCATTAGAAGTGTTTTGGCCAGAAGCAGCGTCTAAACCGTATCTTTCTTACCGATGCAGAGATAATGTATGCTATTGGTCAGCAAGAAATGATGGAATTTACATCTATAATGTTCCTGAAAATAAGTTTGAGTTGCATACTAAATGGTTGCCTGCTTATAGAATGGTTGAGAAGTCGCATTTGGGTTGTTTGCTTTTGACTAGATCGGAAGAATAG

Coding sequence (CDS)

ATGATGATGATCATGAATCTCAAGCATTGCAAGGGCTTACTAGTTTTGGTTATAACATCATTATTGATTGTTATTCAAACAAGCGATGGAGCTCCATTGGAGCATTGGGCAGTGCAAGTAAAGAATGAAATGCAAGGGCAAAGCTTACTTCTTCATTGCAAGTCGAAAGACGATGATTTTGGAAAGCAAATTTTAAAACAAGGGCAATCATTTTCTTGGAAATTTAGAGAAAATCTATGGCAAAACACACTTTATTGGTGTTACATGAGCAATGATCACAATCACGTGTCATTAGAAGTGTTTTGGCCAGAAGCAGCGTCTAAACCGTATCTTTCTTACCGATGCAGAGATAATGTATGCTATTGGTCAGCAAGAAATGATGGAATTTACATCTATAATGTTCCTGAAAATAAGTTTGAGTTGCATACTAAATGGTTGCCTGCTTATAGAATGGTTGAGAAGTCGCATTTGGGTTGTTTGCTTTTGACTAGATCGGAAGAATAG

Protein sequence

MMMIMNLKHCKGLLVLVITSLLIVIQTSDGAPLEHWAVQVKNEMQGQSLLLHCKSKDDDFGKQILKQGQSFSWKFRENLWQNTLYWCYMSNDHNHVSLEVFWPEAASKPYLSYRCRDNVCYWSARNDGIYIYNVPENKFELHTKWLPAYRMVEKSHLGCLLLTRSEE*

Homology

[Close]

BLAST of CsaV3_3G028660.1 vs. NCBI nr
Match: KAE8650840.1 (hypothetical protein Csa_017632 [Cucumis sativus])

HSP 1 Score: 356.7 bits (914), Expect = 1.1e-94
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MMMIMNLKHCKGLLVLVITSLLIVIQTSDGAPLEHWAVQVKNEMQGQSLLLHCKSKDDDF 60
           MMMIMNLKHCKGLLVLVITSLLIVIQTSDGAPLEHWAVQVKNEMQGQSLLLHCKSKDDDF
Sbjct: 1   MMMIMNLKHCKGLLVLVITSLLIVIQTSDGAPLEHWAVQVKNEMQGQSLLLHCKSKDDDF 60

Query: 61  GKQILKQGQSFSWKFRENLWQNTLYWCYMSNDHNHVSLEVFWPEAASKPYLSYRCRDNVC 120
           GKQILKQGQSFSWKFRENLWQNTLYWCYMSNDHNHVSLEVFWPEAASKPYLSYRCRDNVC
Sbjct: 61  GKQILKQGQSFSWKFRENLWQNTLYWCYMSNDHNHVSLEVFWPEAASKPYLSYRCRDNVC 120

Query: 121 YWSARNDGIYIYNVPENKFELHTKWLPAYRMVEKSHLGCLLLTRSEE 168
           YWSARNDGIYIYNVPENKFELHTKWLPAYRMVEKSHLGCLLLTRSEE
Sbjct: 121 YWSARNDGIYIYNVPENKFELHTKWLPAYRMVEKSHLGCLLLTRSEE 167

[Close]

BLAST of CsaV3_3G028660.1 vs. NCBI nr
Match: XP_004136434.3 (S-protein homolog 1-like [Cucumis sativus])

HSP 1 Score: 139.8 bits (351), Expect = 2.1e-29
Identity = 68/136 (50.00%), Postives = 83/136 (61.03%), Query Frame = 0


Query: 14  LVLVITSLLIVIQTSDGA--PLEHWAVQVKNEMQGQSLLLHCKSKDDDFGKQILKQGQSF 73
           +V VI +L+       GA  PL  W + + NEM   +L L CKSKDDD G Q L   Q F
Sbjct: 9   IVCVILALIGECNGQPGAEVPLSSWKINILNEMTKDTLFLQCKSKDDDLGAQNLGVKQQF 68

Query: 74  SWKFRENLWQNTLYWCYMSNDHNHVSLEVFWPEAASKPYLSYRCRDNVCYWSARNDGIYI 133
           SW F+ENLWQ TLYWCYM N  +H S  VFWPE +   +L++RC+   C WSAR+DGIY+
Sbjct: 69  SWSFKENLWQTTLYWCYMHNAESHASFNVFWPEKSG--WLAFRCQLRNCIWSARDDGIYL 128

Query: 134 YNVPENKFELHTKWLP 148
              P N FEL   W P
Sbjct: 129 KTNPHNTFELIHTWEP 142

[Close]

BLAST of CsaV3_3G028660.1 vs. NCBI nr
Match: KGN60342.2 (hypothetical protein Csa_002569, partial [Cucumis sativus])

HSP 1 Score: 139.8 bits (351), Expect = 2.1e-29
Identity = 68/136 (50.00%), Postives = 83/136 (61.03%), Query Frame = 0


Query: 14  LVLVITSLLIVIQTSDGA--PLEHWAVQVKNEMQGQSLLLHCKSKDDDFGKQILKQGQSF 73
           +V VI +L+       GA  PL  W + + NEM   +L L CKSKDDD G Q L   Q F
Sbjct: 19  IVCVILALIGECNGQPGAEVPLSSWKINILNEMTKDTLFLQCKSKDDDLGAQNLGVKQQF 78

Query: 74  SWKFRENLWQNTLYWCYMSNDHNHVSLEVFWPEAASKPYLSYRCRDNVCYWSARNDGIYI 133
           SW F+ENLWQ TLYWCYM N  +H S  VFWPE +   +L++RC+   C WSAR+DGIY+
Sbjct: 79  SWSFKENLWQTTLYWCYMHNAESHASFNVFWPEKSG--WLAFRCQLRNCIWSARDDGIYL 138

Query: 134 YNVPENKFELHTKWLP 148
              P N FEL   W P
Sbjct: 139 KTNPHNTFELIHTWEP 152

[Close]

BLAST of CsaV3_3G028660.1 vs. NCBI nr
Match: KAE8651384.1 (hypothetical protein Csa_001671 [Cucumis sativus])

HSP 1 Score: 133.7 bits (335), Expect = 1.5e-27
Identity = 64/138 (46.38%), Postives = 82/138 (59.42%), Query Frame = 0


Query: 15  VLVITSLLIVIQTSDG-----APLEHWAVQVKNEMQGQSLLLHCKSKDDDFGKQILKQGQ 74
           + V+  +L +I   +G      PL  W V + NEM   SL + CKSKDDD G Q L   Q
Sbjct: 82  IAVVGVILALIGECNGQPGAEVPLSSWKVNILNEMTKDSLFIRCKSKDDDLGAQNLGVKQ 141

Query: 75  SFSWKFRENLWQNTLYWCYMSNDHNHVSLEVFWPEAASKPYLSYRCRDNVCYWSARNDGI 134
            FSW F+ENLWQ TLYWCYM N  +H S  V+WPE +   +L++RC+   C WSAR+DGI
Sbjct: 142 QFSWSFKENLWQTTLYWCYMHNAKSHASFNVYWPERSG--WLAFRCQLRNCIWSARDDGI 201

Query: 135 YIYNVPENKFELHTKWLP 148
           Y+     N +EL   W P
Sbjct: 202 YLKTNTHNTYELIHTWEP 217

[Close]

BLAST of CsaV3_3G028660.1 vs. NCBI nr
Match: XP_004136435.1 (S-protein homolog 1-like [Cucumis sativus])

HSP 1 Score: 133.7 bits (335), Expect = 1.5e-27
Identity = 64/138 (46.38%), Postives = 82/138 (59.42%), Query Frame = 0


Query: 15  VLVITSLLIVIQTSDG-----APLEHWAVQVKNEMQGQSLLLHCKSKDDDFGKQILKQGQ 74
           + V+  +L +I   +G      PL  W V + NEM   SL + CKSKDDD G Q L   Q
Sbjct: 7   IAVVGVILALIGECNGQPGAEVPLSSWKVNILNEMTKDSLFIRCKSKDDDLGAQNLGVKQ 66

Query: 75  SFSWKFRENLWQNTLYWCYMSNDHNHVSLEVFWPEAASKPYLSYRCRDNVCYWSARNDGI 134
            FSW F+ENLWQ TLYWCYM N  +H S  V+WPE +   +L++RC+   C WSAR+DGI
Sbjct: 67  QFSWSFKENLWQTTLYWCYMHNAKSHASFNVYWPERSG--WLAFRCQLRNCIWSARDDGI 126

Query: 135 YIYNVPENKFELHTKWLP 148
           Y+     N +EL   W P
Sbjct: 127 YLKTNTHNTYELIHTWEP 142

[Close]

BLAST of CsaV3_3G028660.1 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.8e-21
Identity = 47/114 (41.23%), Postives = 69/114 (60.53%), Query Frame = 0


Query: 33  LEHWAVQVKNEM-QGQSLLLHCKSKDDDFGKQILKQGQSFSWKFRENLWQNTLYWCYMSN 92
           +  W V V N +  G++L +HCKSK++D G   LK    FSW F EN+  +TL+WCYMS 
Sbjct: 38  ISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSK 97

Query: 93  DHNHVSLEVFWPEAASKPYLSYRCRDNVCYWSARNDGIYIYNVPENKFELHTKW 146
           D  H++++VFW +      L +RC    C W+A+NDG+Y++N    +  L  KW
Sbjct: 98  DDGHMNVKVFWDDV----ILFHRCDWKNCVWTAKNDGLYLWNSAIGEDVLSEKW 147

[Close]

BLAST of CsaV3_3G028660.1 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 4.9e-21
Identity = 45/114 (39.47%), Postives = 68/114 (59.65%), Query Frame = 0


Query: 33  LEHWAVQVKNEM-QGQSLLLHCKSKDDDFGKQILKQGQSFSWKFRENLWQNTLYWCYMSN 92
           +  W V V N +  G++L +HCKSK+DD G+  LK    FSW F EN+  +T +WCYM+ 
Sbjct: 38  ISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNK 97

Query: 93  DHNHVSLEVFWPEAASKPYLSYRCRDNVCYWSARNDGIYIYNVPENKFELHTKW 146
           D+ H+++ VFW +      L +RC    C W+A+ DG+Y++N    +  L  KW
Sbjct: 98  DNGHMNVNVFWDDV----ILFHRCGWKNCIWTAKTDGLYLWNSASGEDVLSRKW 147

[Close]

BLAST of CsaV3_3G028660.1 vs. ExPASy Swiss-Prot
Match: Q9FI84 (S-protein homolog 27 OS=Arabidopsis thaliana OX=3702 GN=SPH27 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.6e-11
Identity = 41/109 (37.61%), Postives = 58/109 (53.21%), Query Frame = 0


Query: 38  VQVKNEMQGQSLLLHCKSKDDDFGKQILKQGQSFSWKFRENLWQNTLYWCYMSNDHNHVS 97
           + VKN      L +HCKSKDDD G  I K+G+ + WKF  N   +TLY+C  S   ++  
Sbjct: 49  ITVKNN-NDYLLGIHCKSKDDDLGFHIHKEGELYGWKFHVNFQNSTLYFCGFSQGQDNKG 108

Query: 98  LEVFWPEAASKPYLSYRCRDNVCYWSARNDGIYIYNVPENKFELHTKWL 147
             VF  + A + +  YRCR+  C W+A+ D +Y Y+          KWL
Sbjct: 109 --VFDIDRAERDF--YRCRN--CTWNAKKDSLYGYSNLPQTVTWFFKWL 150

[Close]

BLAST of CsaV3_3G028660.1 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 4.6e-11
Identity = 37/120 (30.83%), Postives = 60/120 (50.00%), Query Frame = 0


Query: 27  TSDGAPLEHWAVQVKNEMQGQ-SLLLHCKSKDDDFGKQILKQGQSFSWKFRENLWQNTLY 86
           T+   P     V++ N++  Q +LL HCKSKDDD G + L+ G+S+S+ F    +  TLY
Sbjct: 39  TNSVFPTSKRTVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLY 98

Query: 87  WCYMSNDHNHVSLEVFWPEAASKPYLSYRCRDNVCYWSARNDGIYIYNVPENKFELHTKW 146
           +C  S  +   S +++     S      +C  + C W  R +G   +N    +F+L   W
Sbjct: 99  FCSFSWPNESHSFDIYKDHRDSGG--DNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

[Close]

BLAST of CsaV3_3G028660.1 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 7.9e-11
Identity = 49/147 (33.33%), Postives = 70/147 (47.62%), Query Frame = 0


Query: 5   MNLKHCKGLLVLVITSLLI---VIQTSDG-APLEHWAVQVKNEMQGQSLL-LHCKSKDDD 64
           +N   C   +V ++   LI    +Q  +   P+     +V  +     LL +HCKS+DDD
Sbjct: 9   LNSYFCSIFIVSIVVISLICSEALQIQEAKEPIRGHLTRVTIQNDNDYLLGIHCKSRDDD 68

Query: 65  FGKQILKQGQSFSWKFRENLWQNTLYWCYMSNDHNHVSLEVFWPEAASKPYLSYRCRDNV 124
            G  IL +G+ F WKF  N   +TLY+C  S     +   VF    A++ +  YRC +  
Sbjct: 69  LGFHILAKGELFGWKFHVNFCYSTLYFCGFS--QGQMKKGVFEIYRANRDF--YRCAN-- 128

Query: 125 CYWSARNDGIYIYNVPENKFELHTKWL 147
           C W A  DGIY Y+    K  L   WL
Sbjct: 129 CTWKAEKDGIYGYSEDPVKGYLFYNWL 149

[Close]

BLAST of CsaV3_3G028660.1 vs. ExPASy TrEMBL
Match: A0A0A0L8P9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G623980 PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 3.0e-29
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0


Query: 89  MSNDHNHVSLEVFWPEAASKPYLSYRCRDNVCYWSARNDGIYIYNVPENKFELHTKWLP 148
           MSNDHNHVSLEVFWPEAASKPYLSYRCRDNVCYWSARNDGIYIYNVPENKFELHTKWLP
Sbjct: 1   MSNDHNHVSLEVFWPEAASKPYLSYRCRDNVCYWSARNDGIYIYNVPENKFELHTKWLP 59

[Close]

BLAST of CsaV3_3G028660.1 vs. ExPASy TrEMBL
Match: A0A5E4EKH7 (S-protein homolog OS=Prunus dulcis OX=3755 GN=ALMOND_2B010815 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 2.4e-26
Identity = 57/126 (45.24%), Postives = 79/126 (62.70%), Query Frame = 0


Query: 26  QTSDGAPLEHWAVQVKNEM-QGQSLLLHCKSKDDDFGKQILKQGQSFSWKFRENLWQNTL 85
           QT+ G P+  W V V N+M   ++L+ HCKSKDDD G + +  G  F+W F+EN    TL
Sbjct: 37  QTNLGYPINKWVVHVVNQMGASKTLVAHCKSKDDDLGIRDVLPGNEFNWSFKENFGGTTL 96

Query: 86  YWCYMSNDHNHVSLEVFWPEAASK-PYLSYRCRDNVCYWSARNDGIYIYNVPENKFELHT 145
           +WC + N+H H + +VFW E  SK  +L YRC    C+W A++DGIYI N PE + EL  
Sbjct: 97  FWCNIHNNHQHANFQVFWHEDESKSSWLHYRCNWKECFWVAKDDGIYIRNTPEGRDELQH 156

Query: 146 KWLPAY 150
           +W P +
Sbjct: 157 QWEPGW 162

[Close]

BLAST of CsaV3_3G028660.1 vs. ExPASy TrEMBL
Match: A0A6J5VTZ1 (S-protein homolog OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS51617 PE=3 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 3.1e-26
Identity = 56/126 (44.44%), Postives = 80/126 (63.49%), Query Frame = 0


Query: 26  QTSDGAPLEHWAVQVKNEM-QGQSLLLHCKSKDDDFGKQILKQGQSFSWKFRENLWQNTL 85
           QT+ G P+  W V V N+M   ++L+ HCKSKDDD G + +  G  F+W F+EN    TL
Sbjct: 37  QTNLGYPINKWVVHVVNQMGASKALVAHCKSKDDDLGIRDVPPGNEFNWSFKENFGGTTL 96

Query: 86  YWCYMSNDHNHVSLEVFWPEAASK-PYLSYRCRDNVCYWSARNDGIYIYNVPENKFELHT 145
           +WC + N+H H + +VFW E  +K  +L YRC    C+W A++DGIYI N PE++ EL  
Sbjct: 97  FWCNIHNNHQHANFQVFWHEDETKSSWLHYRCNWKECFWVAKDDGIYIRNTPESRDELQH 156

Query: 146 KWLPAY 150
           +W P +
Sbjct: 157 QWEPGW 162

[Close]

BLAST of CsaV3_3G028660.1 vs. ExPASy TrEMBL
Match: A0A5N6QHU0 (S-protein homolog OS=Carpinus fangiana OX=176857 GN=FH972_002530 PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 4.1e-26
Identity = 60/117 (51.28%), Postives = 74/117 (63.25%), Query Frame = 0


Query: 30  GAPLEHWAVQVKNEMQGQSLLLHCKSKDDDFGKQILKQGQSFSWKFRENLWQNTLYWCYM 89
           G PL  W V V N M    L LHCKSKDDD G Q L+ GQ  SW F+EN    TLYWCYM
Sbjct: 32  GFPLRKWHVHVYNGMGVGKLFLHCKSKDDDLGSQTLEVGQDLSWSFKENFLGTTLYWCYM 91

Query: 90  -SNDHNHVSLEVFWPEAASKPYLSYRCRDNVCYWSARNDGIYIYNVPENKFELHTKW 146
             +D +H +L+VFW E  +K +LSYRC    C W A++DGIY+  +PEN+ +   KW
Sbjct: 92  QKDDKSHATLDVFWMERKNK-WLSYRCNWKNCIWIAKDDGIYLRVIPENRDDFVHKW 147

[Close]

BLAST of CsaV3_3G028660.1 vs. ExPASy TrEMBL
Match: A0A251N105 (S-protein homolog OS=Prunus persica OX=3760 GN=PRUPE_8G208400 PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 4.1e-26
Identity = 57/126 (45.24%), Postives = 79/126 (62.70%), Query Frame = 0


Query: 26  QTSDGAPLEHWAVQVKNEM-QGQSLLLHCKSKDDDFGKQILKQGQSFSWKFRENLWQNTL 85
           QT+ G P+  W V V N+M   ++L+ HCKSKDDD G + +  G  F+W F+EN    TL
Sbjct: 37  QTNLGYPINKWVVHVVNQMGASKTLVAHCKSKDDDLGIRDVLPGNEFNWGFKENFGGTTL 96

Query: 86  YWCYMSNDHNHVSLEVFWPEAASK-PYLSYRCRDNVCYWSARNDGIYIYNVPENKFELHT 145
           +WC + N+H H + +VFW E  SK  +L YRC    C+W A++DGIYI N PE + EL  
Sbjct: 97  FWCNIHNNHQHANFQVFWHEDESKSSWLHYRCNWKECFWVAKDDGIYIRNTPEGRDELQH 156

Query: 146 KWLPAY 150
           +W P +
Sbjct: 157 QWEPGW 162

[Close]

BLAST of CsaV3_3G028660.1 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 102.8 bits (255), Expect = 2.7e-22
Identity = 47/114 (41.23%), Postives = 69/114 (60.53%), Query Frame = 0


Query: 33  LEHWAVQVKNEM-QGQSLLLHCKSKDDDFGKQILKQGQSFSWKFRENLWQNTLYWCYMSN 92
           +  W V V N +  G++L +HCKSK++D G   LK    FSW F EN+  +TL+WCYMS 
Sbjct: 38  ISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSK 97

Query: 93  DHNHVSLEVFWPEAASKPYLSYRCRDNVCYWSARNDGIYIYNVPENKFELHTKW 146
           D  H++++VFW +      L +RC    C W+A+NDG+Y++N    +  L  KW
Sbjct: 98  DDGHMNVKVFWDDV----ILFHRCDWKNCVWTAKNDGLYLWNSAIGEDVLSEKW 147

[Close]

BLAST of CsaV3_3G028660.1 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 102.4 bits (254), Expect = 3.5e-22
Identity = 45/114 (39.47%), Postives = 68/114 (59.65%), Query Frame = 0


Query: 33  LEHWAVQVKNEM-QGQSLLLHCKSKDDDFGKQILKQGQSFSWKFRENLWQNTLYWCYMSN 92
           +  W V V N +  G++L +HCKSK+DD G+  LK    FSW F EN+  +T +WCYM+ 
Sbjct: 38  ISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNK 97

Query: 93  DHNHVSLEVFWPEAASKPYLSYRCRDNVCYWSARNDGIYIYNVPENKFELHTKW 146
           D+ H+++ VFW +      L +RC    C W+A+ DG+Y++N    +  L  KW
Sbjct: 98  DNGHMNVNVFWDDV----ILFHRCGWKNCIWTAKTDGLYLWNSASGEDVLSRKW 147

[Close]

BLAST of CsaV3_3G028660.1 vs. TAIR 10
Match: AT5G06020.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 70.9 bits (172), Expect = 1.1e-12
Identity = 41/109 (37.61%), Postives = 58/109 (53.21%), Query Frame = 0


Query: 38  VQVKNEMQGQSLLLHCKSKDDDFGKQILKQGQSFSWKFRENLWQNTLYWCYMSNDHNHVS 97
           + VKN      L +HCKSKDDD G  I K+G+ + WKF  N   +TLY+C  S   ++  
Sbjct: 49  ITVKNN-NDYLLGIHCKSKDDDLGFHIHKEGELYGWKFHVNFQNSTLYFCGFSQGQDNKG 108

Query: 98  LEVFWPEAASKPYLSYRCRDNVCYWSARNDGIYIYNVPENKFELHTKWL 147
             VF  + A + +  YRCR+  C W+A+ D +Y Y+          KWL
Sbjct: 109 --VFDIDRAERDF--YRCRN--CTWNAKKDSLYGYSNLPQTVTWFFKWL 150

[Close]

BLAST of CsaV3_3G028660.1 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 69.3 bits (168), Expect = 3.3e-12
Identity = 37/120 (30.83%), Postives = 60/120 (50.00%), Query Frame = 0


Query: 27  TSDGAPLEHWAVQVKNEMQGQ-SLLLHCKSKDDDFGKQILKQGQSFSWKFRENLWQNTLY 86
           T+   P     V++ N++  Q +LL HCKSKDDD G + L+ G+S+S+ F    +  TLY
Sbjct: 39  TNSVFPTSKRTVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLY 98

Query: 87  WCYMSNDHNHVSLEVFWPEAASKPYLSYRCRDNVCYWSARNDGIYIYNVPENKFELHTKW 146
           +C  S  +   S +++     S      +C  + C W  R +G   +N    +F+L   W
Sbjct: 99  FCSFSWPNESHSFDIYKDHRDSGG--DNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

[Close]

BLAST of CsaV3_3G028660.1 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 66.2 bits (160), Expect = 2.8e-11
Identity = 36/100 (36.00%), Postives = 51/100 (51.00%), Query Frame = 0


Query: 38  VQVKNEMQGQSLL-LHCKSKDDDFGKQILKQGQSFSWKFRENLWQNTLYWCYMSNDHN-- 97
           V + N+++   LL +HC+SKDDD G+ ILK GQ + + F +N+WQ T + C M    N  
Sbjct: 29  VVLSNQLEHSKLLKVHCRSKDDDLGEHILKIGQDYEFTFGDNIWQTTSFSCQMDQGPNFK 88

Query: 98  ----HVSLEVFWPEAASKPYLSYRCRDNVCYWSARNDGIY 131
                V+ E  W +A           +  C W  R DGIY
Sbjct: 89  HHLDFVAYETSWSKAL----------EASCKWIGREDGIY 118

The following BLAST results are available for this feature:

BLAST of CsaV3_3G028660.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650840.1	1.1e-94	100.00	hypothetical protein Csa_017632 [Cucumis sativus]	[more]
XP_004136434.3	2.1e-29	50.00	S-protein homolog 1-like [Cucumis sativus]	[more]
KGN60342.2	2.1e-29	50.00	hypothetical protein Csa_002569, partial [Cucumis sativus]	[more]
KAE8651384.1	1.5e-27	46.38	hypothetical protein Csa_001671 [Cucumis sativus]	[more]
XP_004136435.1	1.5e-27	46.38	S-protein homolog 1-like [Cucumis sativus]	[more]

BLAST of CsaV3_3G028660.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2HQ46	3.8e-21	41.23	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
F4JLS0	4.9e-21	39.47	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
Q9FI84	1.6e-11	37.61	S-protein homolog 27 OS=Arabidopsis thaliana OX=3702 GN=SPH27 PE=2 SV=1	[more]
F4JLQ5	4.6e-11	30.83	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]
P0DN92	7.9e-11	33.33	S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1	[more]

BLAST of CsaV3_3G028660.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8P9	3.0e-29	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G623980 PE=3 SV=1	[more]
A0A5E4EKH7	2.4e-26	45.24	S-protein homolog OS=Prunus dulcis OX=3755 GN=ALMOND_2B010815 PE=3 SV=1	[more]
A0A6J5VTZ1	3.1e-26	44.44	S-protein homolog OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS51617 PE=3 SV=1	[more]
A0A5N6QHU0	4.1e-26	51.28	S-protein homolog OS=Carpinus fangiana OX=176857 GN=FH972_002530 PE=3 SV=1	[more]
A0A251N105	4.1e-26	45.24	S-protein homolog OS=Prunus persica OX=3760 GN=PRUPE_8G208400 PE=3 SV=1	[more]

BLAST of CsaV3_3G028660.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29035.1	2.7e-22	41.23	Plant self-incompatibility protein S1 family	[more]
AT4G16295.1	3.5e-22	39.47	S-protein homologue 1	[more]
AT5G06020.1	1.1e-12	37.61	Plant self-incompatibility protein S1 family	[more]
AT4G16195.1	3.3e-12	30.83	Plant self-incompatibility protein S1 family	[more]
AT5G04350.1	2.8e-11	36.00	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 38..145 e-value: 1.0E-25 score: 90.2
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 28..131
None	No IPR available	PANTHER	PTHR31232:SF34	PUTATIVE-RELATED	coord: 28..131

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_3G028660	CsaV3_3G028660	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_3G028660.1.exon2	CsaV3_3G028660.1.exon2	exon
CsaV3_3G028660.1.exon1	CsaV3_3G028660.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_3G028660.1.cds2	CsaV3_3G028660.1.cds2	CDS
CsaV3_3G028660.1.cds1	CsaV3_3G028660.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_3G028660.1	CsaV3_3G028660.1-protein	polypeptide