CsaV3_3G020010.1 (mRNA) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G020010.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	AAI domain-containing protein
Location	chr3: 15890511 .. 15891474 (+)
Sequence length	444
RNA-Seq Expression	CsaV3_3G020010.1
Synteny	CsaV3_3G020010.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCTCTTTCTTTAACATAATTCTTCCAAACATATGTGTATATATACATATTGTTATAAATTAATCCATAAACACACACAGAGAGAACGAAGCAGATCATCAAATTGAATGGAAATTAGAAGAGAAATAATGAAGAAAATAGTAGCAGCAGCAGTAGTAATGGTATTATTAGGCTGCGGTGGAAGCATTGGAACAATGGCTCAAAGTGAAGACACATCGTGTGTGAATACATTAATTCCATGCTTAAATTACGTAAACGGAACCAGAGATCCACCGGAGAGTTGCTGTAATCCACTGAGATCCATCATCAATTCAAATCCGGAATGCCTTTGCGGTTTAATTAGCAGAGAAGGAAGCAATAGAGCGGAGGCGGCAGGGATAGATATCAACGAGGCTCAACTCTTACCCGCTCGATGTGGAGAACATGTTAATCCTCTCTCTTGCCTTGCTGCTAATAATACTTCTGGTAATTAATTGACTGCAAAAAACAACTTCTTTTAAGAGTATAATTTAGAGTGAGAATTTGTTAAAGGGCTAAAATTGCAACCTTCCATTGAATAAATTCATACAATTTGATAAGCTAATTAGAGTAGACATAATATTTTCTCTTCTTTATTATTTCTGGCTTCCAAATCCGTTGGATTTGTCCTTTGTTATTTGGTTTCTTTTTCCCTTCTTTTGTTGGATTCTATTTTGATTCATTCTTGATTTGAATTTGCAGGCTCGCCCTCCATGTCTTTGGCTCTTCAAGTAATTACACTTGCGATTTCCACAAAGCTTATCATGTCTTCAATTCTTCACTTTTAGGTTTTGTTTGCACCCATTTATCCATTATGTGTCTCTCTTACCATTTTTCATTATCAATATATTGTCACCTTTTGTTTTAAACGCTGAAAAAGGAAATTTTATCTTTTGGTATCAATGTAGGTTCAAGATTAAAATGACTATTAGTATTTAATATTTG

mRNA sequence

ATGGAAATTAGAAGAGAAATAATGAAGAAAATAGTAGCAGCAGCAGTAGTAATGGTATTATTAGGCTGCGGTGGAAGCATTGGAACAATGGCTCAAAGTGAAGACACATCGTGTGTGAATACATTAATTCCATGCTTAAATTACGTAAACGGAACCAGAGATCCACCGGAGAGTTGCTGTAATCCACTGAGATCCATCATCAATTCAAATCCGGAATGCCTTTGCGGTTTAATTAGCAGAGAAGGAAGCAATAGAGCGGAGGCGGCAGGGATAGATATCAACGAGGCTCAACTCTTACCCGCTCGATGTGGAGAACATGTTAATCCTCTCTCTTGCCTTGCTGCTAATAATACTTCTGGCTCGCCCTCCATGTCTTTGGCTCTTCAAGTAATTACACTTGCGATTTCCACAAAGCTTATCATGTCTTCAATTCTTCACTTTTAG

Coding sequence (CDS)

ATGGAAATTAGAAGAGAAATAATGAAGAAAATAGTAGCAGCAGCAGTAGTAATGGTATTATTAGGCTGCGGTGGAAGCATTGGAACAATGGCTCAAAGTGAAGACACATCGTGTGTGAATACATTAATTCCATGCTTAAATTACGTAAACGGAACCAGAGATCCACCGGAGAGTTGCTGTAATCCACTGAGATCCATCATCAATTCAAATCCGGAATGCCTTTGCGGTTTAATTAGCAGAGAAGGAAGCAATAGAGCGGAGGCGGCAGGGATAGATATCAACGAGGCTCAACTCTTACCCGCTCGATGTGGAGAACATGTTAATCCTCTCTCTTGCCTTGCTGCTAATAATACTTCTGGCTCGCCCTCCATGTCTTTGGCTCTTCAAGTAATTACACTTGCGATTTCCACAAAGCTTATCATGTCTTCAATTCTTCACTTTTAG

Protein sequence

MEIRREIMKKIVAAAVVMVLLGCGGSIGTMAQSEDTSCVNTLIPCLNYVNGTRDPPESCCNPLRSIINSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTSGSPSMSLALQVITLAISTKLIMSSILHF*

Homology

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BLAST of CsaV3_3G020010.1 vs. NCBI nr
Match: XP_004145619.1 (lipid transfer-like protein VAS [Cucumis sativus] >KGN57679.1 hypothetical protein Csa_011401 [Cucumis sativus])

HSP 1 Score: 288.9 bits (738), Expect = 2.5e-74
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MEIRREIMKKIVAAAVVMVLLGCGGSIGTMAQSEDTSCVNTLIPCLNYVNGTRDPPESCC 60
           MEIRREIMKKIVAAAVVMVLLGCGGSIGTMAQSEDTSCVNTLIPCLNYVNGTRDPPESCC
Sbjct: 1   MEIRREIMKKIVAAAVVMVLLGCGGSIGTMAQSEDTSCVNTLIPCLNYVNGTRDPPESCC 60

Query: 61  NPLRSIINSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTSG 120
           NPLRSIINSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTSG
Sbjct: 61  NPLRSIINSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTSG 120

Query: 121 SPSMSLALQVITLAISTKLIMSSILHF 148
           SPSMSLALQVITLAISTKLIMSSILHF
Sbjct: 121 SPSMSLALQVITLAISTKLIMSSILHF 147

[Close]

BLAST of CsaV3_3G020010.1 vs. NCBI nr
Match: XP_008449981.1 (PREDICTED: lipid transfer-like protein VAS [Cucumis melo])

HSP 1 Score: 265.0 bits (676), Expect = 3.9e-67
Identity = 137/148 (92.57%), Postives = 141/148 (95.27%), Query Frame = 0


Query: 1   MEIRREIMKKIV-AAAVVMVLLGCGGSIGTMAQSEDTSCVNTLIPCLNYVNGTRDPPESC 60
           MEIRR  MKKIV AAAVVMVLLGCGGSIGTMAQ+E TSCVNTL+PCLNYVNGTRDPPESC
Sbjct: 1   MEIRRATMKKIVAAAAVVMVLLGCGGSIGTMAQNEKTSCVNTLVPCLNYVNGTRDPPESC 60

Query: 61  CNPLRSIINSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTS 120
           C+PLRSIINSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTS
Sbjct: 61  CSPLRSIINSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTS 120

Query: 121 GSPSMSLALQVITLAISTKLIMSSILHF 148
           G  S+SL LQVITLAISTKLIMSSILHF
Sbjct: 121 GLVSISLTLQVITLAISTKLIMSSILHF 148

[Close]

BLAST of CsaV3_3G020010.1 vs. NCBI nr
Match: KAA0048555.1 (lipid transfer-like protein VAS [Cucumis melo var. makuwa] >TYK28357.1 lipid transfer-like protein VAS [Cucumis melo var. makuwa])

HSP 1 Score: 256.9 bits (655), Expect = 1.1e-64
Identity = 132/141 (93.62%), Postives = 136/141 (96.45%), Query Frame = 0


Query: 8   MKKIV-AAAVVMVLLGCGGSIGTMAQSEDTSCVNTLIPCLNYVNGTRDPPESCCNPLRSI 67
           MKKIV AAAVVMVLLGCGGSIGTMAQ+E TSCVNTL+PCLNYVNGTRDPPESCC+PLRSI
Sbjct: 1   MKKIVAAAAVVMVLLGCGGSIGTMAQNEKTSCVNTLVPCLNYVNGTRDPPESCCSPLRSI 60

Query: 68  INSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTSGSPSMSL 127
           INSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTSG  S+SL
Sbjct: 61  INSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTSGLVSISL 120

Query: 128 ALQVITLAISTKLIMSSILHF 148
            LQVITLAISTKLIMSSILHF
Sbjct: 121 TLQVITLAISTKLIMSSILHF 141

[Close]

BLAST of CsaV3_3G020010.1 vs. NCBI nr
Match: XP_038901700.1 (non-specific lipid transfer protein GPI-anchored 30 [Benincasa hispida])

HSP 1 Score: 210.7 bits (535), Expect = 8.7e-51
Identity = 114/147 (77.55%), Postives = 124/147 (84.35%), Query Frame = 0


Query: 1   MEIRREIMKKIVAAAVVMVLLGCGGSIGTMAQSEDTSCVNTLIPCLNYVNGTRDPPESCC 60
           MEIR  + K IV  AVV    GC  ++G MAQ++DTSCVN LIPCLNY+NGT DPPESCC
Sbjct: 60  MEIRSAMAKMIVLLAVV----GC-ATMG-MAQNQDTSCVNRLIPCLNYLNGTGDPPESCC 119

Query: 61  NPLRSIINSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTSG 120
           NPLRSII+SNP+CLCGLISREGSNRAEAAGIDIN+AQLLPARCGEHVNPLSCL ANN +G
Sbjct: 120 NPLRSIIDSNPDCLCGLISREGSNRAEAAGIDINQAQLLPARCGEHVNPLSCLTANN-AG 179

Query: 121 SPSMSLALQVITLAISTKLIMSSILHF 148
            PSMS  LQVITLA ST LIM SILHF
Sbjct: 180 LPSMSSTLQVITLATSTMLIMPSILHF 199

[Close]

BLAST of CsaV3_3G020010.1 vs. NCBI nr
Match: XP_022983266.1 (lipid transfer-like protein VAS [Cucurbita maxima])

HSP 1 Score: 178.3 bits (451), Expect = 4.8e-41
Identity = 83/129 (64.34%), Postives = 107/129 (82.95%), Query Frame = 0


Query: 19  VLLGCGGSIGTMAQSEDTSCVNTLIPCLNYVNGTRDPPESCCNPLRSIINSNPECLCGLI 78
           +LL    ++   A+++DTSC+N LIPCLNY+NGTRDPP SCCNPL+S+I+SNP+CLC LI
Sbjct: 13  MLLVLASAMAFQARAQDTSCMNRLIPCLNYLNGTRDPPPSCCNPLKSVIDSNPDCLCALI 72

Query: 79  SREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTSGSPSMSLALQVITLAISTK 138
           SR+GS+RAE AGID+++AQLLP RCGEHVNPLSCLAA N + S S+S ALQ+I+L  +  
Sbjct: 73  SRDGSDRAEQAGIDVSQAQLLPGRCGEHVNPLSCLAAANNARSLSISSALQLISLTSTAS 132

Query: 139 LIMSSILHF 148
           L+MS +LHF
Sbjct: 133 LLMSGVLHF 141

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BLAST of CsaV3_3G020010.1 vs. ExPASy Swiss-Prot
Match: Q9FFY3 (Non-specific lipid transfer protein GPI-anchored 30 OS=Arabidopsis thaliana OX=3702 GN=LTPG30 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.3e-29
Identity = 64/132 (48.48%), Postives = 90/132 (68.18%), Query Frame = 0


Query: 18  MVLLGCGGSIGTMAQSEDTSCVNTLIPCLNYVNGTRDPPESCCNPLRSIINSNPECLCGL 77
           +VLL    S G     +  SC+N L PCLNY+NGT++ P+ CCNPL+S+I +NPECLC +
Sbjct: 12  VVLLLVAASSGMRINGQSVSCLNQLAPCLNYLNGTKEVPQVCCNPLKSVIRNNPECLCRM 71

Query: 78  ISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCL-----AANNTSGSPSM----SLAL 137
           IS   S++AE AGID+N+AQ+LPARCGEHVNP++CL      + N+  S S+    S + 
Sbjct: 72  ISNRWSSQAERAGIDVNDAQMLPARCGEHVNPIACLTRSRGGSTNSDRSSSIGNTFSQSY 131

Query: 138 QVITLAISTKLI 141
            + TLAI+  ++
Sbjct: 132 WMTTLAIAATVL 143

[Close]

BLAST of CsaV3_3G020010.1 vs. ExPASy Swiss-Prot
Match: Q9LJ86 (Non-specific lipid transfer protein GPI-anchored 5 OS=Arabidopsis thaliana OX=3702 GN=LTPG5 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.0e-09
Identity = 41/124 (33.06%), Postives = 62/124 (50.00%), Query Frame = 0


Query: 8   MKKIVAAAVVMVLLGCGGSIGTMAQSEDTSCVNTLIPCLNYVNG-TRDPPESCCNPLRSI 67
           MK  +    + V +    S    AQS  T+ + ++ PCLNY+ G +  P + CCN L  +
Sbjct: 1   MKMEMGLVFLTVFMAVMSSTMVSAQSSCTNALISMSPCLNYITGNSTSPNQQCCNQLSRV 60

Query: 68  INSNPECLCGLISREGSNRAEAAGIDINEAQL--LPARCGEHVNPLS-CLAANNTSGSPS 127
           + S+P+CLC +++  GS      GI++N+ Q   LP  C     P+S C       GS S
Sbjct: 61  VQSSPDCLCQVLNGGGSQ----LGINVNQTQALGLPRACNVQTPPVSRCNTGGGGGGSTS 120

[Close]

BLAST of CsaV3_3G020010.1 vs. ExPASy Swiss-Prot
Match: Q7EB72 (Non-specific lipid transfer protein GPI-anchored 15 OS=Arabidopsis thaliana OX=3702 GN=LTPG15 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.6e-07
Identity = 34/94 (36.17%), Postives = 51/94 (54.26%), Query Frame = 0


Query: 36  TSCVNTLI---PCLNYVNG-TRDPPESCCNPLRSIINSNPECLCGLISREGSNRAEAAGI 95
           +SCV+TL    PCL+Y+ G +  P + CC+ L S+I S+P+C+C  ++    N     G+
Sbjct: 28  SSCVSTLTTLSPCLSYITGNSTTPSQPCCSRLDSVIKSSPQCICSAVNSPIPN----IGL 87

Query: 96  DINEAQL--LPARCGEHVNPLS-CLAANNTSGSP 123
           +IN  Q   LP  C     PL+ C AA   +  P
Sbjct: 88  NINRTQALQLPNACNIQTPPLTQCNAATGPTAQP 117

[Close]

BLAST of CsaV3_3G020010.1 vs. ExPASy Swiss-Prot
Match: F4HZB9 (Non-specific lipid transfer protein GPI-anchored 19 OS=Arabidopsis thaliana OX=3702 GN=LTPG19 PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 6.1e-07
Identity = 38/121 (31.40%), Postives = 55/121 (45.45%), Query Frame = 0


Query: 15  AVVMVLLGCGGSIGTMAQSEDTSCVNTLIPCLNYVN-GTRDPPESCCNPLRSIINSNPEC 74
           A+V+     GG+    A   DT  + +L PCL Y+N G+  P  SCC    +++ S+PEC
Sbjct: 7   ALVIATFLYGGATTVQAGCRDT--LTSLSPCLYYLNGGSSSPSWSCCRQFSTVVQSSPEC 66

Query: 75  LCGLISREGSNRAEAAGIDINEAQLL------------PARCGEHVNPLSCLAANNTSGS 123
           LC +++   SN +   G   N    L            P+ C    N  + L AN   GS
Sbjct: 67  LCSVVN---SNESSFYGFKFNRTLALNLPTACNVQTPSPSLCNTGGNVPTTLPANTPVGS 122

[Close]

BLAST of CsaV3_3G020010.1 vs. ExPASy Swiss-Prot
Match: Q1PFD8 (Non-specific lipid transfer protein GPI-anchored 9 OS=Arabidopsis thaliana OX=3702 GN=LTPG9 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 6.1e-07
Identity = 36/119 (30.25%), Postives = 56/119 (47.06%), Query Frame = 0


Query: 8   MKKIVAAAVVMVLLGCGGSIGTMAQSEDTSCVNTLIPCLNYVNGTR-DPPESCCNPLRSI 67
           + K +A  V +V+L    +       + T+C+  L+PC  Y++     PP SCC P++ I
Sbjct: 3   INKFLAVVVAVVVLYSVEATAQGGNPQLTACLQKLLPCQPYIHSLNPPPPPSCCGPMKEI 62

Query: 68  INSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTSGSPSMS 126
           +  +  CLC  I+       +A  +    A LLP  CG  VNP   L +   + SP  S
Sbjct: 63  VEKDAPCLC--IAFNNPEVLKALNLTKENALLLPKACG--VNPDVSLCSKIATPSPIAS 117

[Close]

BLAST of CsaV3_3G020010.1 vs. ExPASy TrEMBL
Match: A0A0A0L9L7 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G250900 PE=3 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.2e-74
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MEIRREIMKKIVAAAVVMVLLGCGGSIGTMAQSEDTSCVNTLIPCLNYVNGTRDPPESCC 60
           MEIRREIMKKIVAAAVVMVLLGCGGSIGTMAQSEDTSCVNTLIPCLNYVNGTRDPPESCC
Sbjct: 1   MEIRREIMKKIVAAAVVMVLLGCGGSIGTMAQSEDTSCVNTLIPCLNYVNGTRDPPESCC 60

Query: 61  NPLRSIINSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTSG 120
           NPLRSIINSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTSG
Sbjct: 61  NPLRSIINSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTSG 120

Query: 121 SPSMSLALQVITLAISTKLIMSSILHF 148
           SPSMSLALQVITLAISTKLIMSSILHF
Sbjct: 121 SPSMSLALQVITLAISTKLIMSSILHF 147

[Close]

BLAST of CsaV3_3G020010.1 vs. ExPASy TrEMBL
Match: A0A1S3BMN1 (lipid transfer-like protein VAS OS=Cucumis melo OX=3656 GN=LOC103491702 PE=3 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.9e-67
Identity = 137/148 (92.57%), Postives = 141/148 (95.27%), Query Frame = 0


Query: 1   MEIRREIMKKIV-AAAVVMVLLGCGGSIGTMAQSEDTSCVNTLIPCLNYVNGTRDPPESC 60
           MEIRR  MKKIV AAAVVMVLLGCGGSIGTMAQ+E TSCVNTL+PCLNYVNGTRDPPESC
Sbjct: 1   MEIRRATMKKIVAAAAVVMVLLGCGGSIGTMAQNEKTSCVNTLVPCLNYVNGTRDPPESC 60

Query: 61  CNPLRSIINSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTS 120
           C+PLRSIINSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTS
Sbjct: 61  CSPLRSIINSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTS 120

Query: 121 GSPSMSLALQVITLAISTKLIMSSILHF 148
           G  S+SL LQVITLAISTKLIMSSILHF
Sbjct: 121 GLVSISLTLQVITLAISTKLIMSSILHF 148

[Close]

BLAST of CsaV3_3G020010.1 vs. ExPASy TrEMBL
Match: A0A5A7U4K4 (Lipid transfer-like protein VAS OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001950 PE=3 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 5.1e-65
Identity = 132/141 (93.62%), Postives = 136/141 (96.45%), Query Frame = 0


Query: 8   MKKIV-AAAVVMVLLGCGGSIGTMAQSEDTSCVNTLIPCLNYVNGTRDPPESCCNPLRSI 67
           MKKIV AAAVVMVLLGCGGSIGTMAQ+E TSCVNTL+PCLNYVNGTRDPPESCC+PLRSI
Sbjct: 1   MKKIVAAAAVVMVLLGCGGSIGTMAQNEKTSCVNTLVPCLNYVNGTRDPPESCCSPLRSI 60

Query: 68  INSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTSGSPSMSL 127
           INSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTSG  S+SL
Sbjct: 61  INSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTSGLVSISL 120

Query: 128 ALQVITLAISTKLIMSSILHF 148
            LQVITLAISTKLIMSSILHF
Sbjct: 121 TLQVITLAISTKLIMSSILHF 141

[Close]

BLAST of CsaV3_3G020010.1 vs. ExPASy TrEMBL
Match: A0A6J1J1M2 (lipid transfer-like protein VAS OS=Cucurbita maxima OX=3661 GN=LOC111481899 PE=3 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 2.3e-41
Identity = 83/129 (64.34%), Postives = 107/129 (82.95%), Query Frame = 0


Query: 19  VLLGCGGSIGTMAQSEDTSCVNTLIPCLNYVNGTRDPPESCCNPLRSIINSNPECLCGLI 78
           +LL    ++   A+++DTSC+N LIPCLNY+NGTRDPP SCCNPL+S+I+SNP+CLC LI
Sbjct: 13  MLLVLASAMAFQARAQDTSCMNRLIPCLNYLNGTRDPPPSCCNPLKSVIDSNPDCLCALI 72

Query: 79  SREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTSGSPSMSLALQVITLAISTK 138
           SR+GS+RAE AGID+++AQLLP RCGEHVNPLSCLAA N + S S+S ALQ+I+L  +  
Sbjct: 73  SRDGSDRAEQAGIDVSQAQLLPGRCGEHVNPLSCLAAANNARSLSISSALQLISLTSTAS 132

Query: 139 LIMSSILHF 148
           L+MS +LHF
Sbjct: 133 LLMSGVLHF 141

[Close]

BLAST of CsaV3_3G020010.1 vs. ExPASy TrEMBL
Match: A0A6J1F9V7 (lipid transfer-like protein VAS OS=Cucurbita moschata OX=3662 GN=LOC111442128 PE=3 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.3e-39
Identity = 80/129 (62.02%), Postives = 104/129 (80.62%), Query Frame = 0


Query: 19  VLLGCGGSIGTMAQSEDTSCVNTLIPCLNYVNGTRDPPESCCNPLRSIINSNPECLCGLI 78
           +LL    ++    +++DTSC+N LIPCLNY+NGTRDPP SCCNPL+S+I+SNP+CLC LI
Sbjct: 13  MLLVLASAMAFQGRAQDTSCMNRLIPCLNYLNGTRDPPSSCCNPLKSVIDSNPDCLCALI 72

Query: 79  SREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTSGSPSMSLALQVITLAISTK 138
           SR+GS+RAE AGID+++AQLLP RCGEHVNPLSCLAA N + S S+S  LQ+I+L  +  
Sbjct: 73  SRDGSDRAEQAGIDVSQAQLLPGRCGEHVNPLSCLAAANNARSLSISSTLQLISLTSTAS 132

Query: 139 LIMSSILHF 148
           L+MS +L F
Sbjct: 133 LLMSGVLRF 141

[Close]

BLAST of CsaV3_3G020010.1 vs. TAIR 10
Match: AT5G13900.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 129.4 bits (324), Expect = 2.4e-30
Identity = 64/132 (48.48%), Postives = 90/132 (68.18%), Query Frame = 0


Query: 18  MVLLGCGGSIGTMAQSEDTSCVNTLIPCLNYVNGTRDPPESCCNPLRSIINSNPECLCGL 77
           +VLL    S G     +  SC+N L PCLNY+NGT++ P+ CCNPL+S+I +NPECLC +
Sbjct: 12  VVLLLVAASSGMRINGQSVSCLNQLAPCLNYLNGTKEVPQVCCNPLKSVIRNNPECLCRM 71

Query: 78  ISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCL-----AANNTSGSPSM----SLAL 137
           IS   S++AE AGID+N+AQ+LPARCGEHVNP++CL      + N+  S S+    S + 
Sbjct: 72  ISNRWSSQAERAGIDVNDAQMLPARCGEHVNPIACLTRSRGGSTNSDRSSSIGNTFSQSY 131

Query: 138 QVITLAISTKLI 141
            + TLAI+  ++
Sbjct: 132 WMTTLAIAATVL 143

[Close]

BLAST of CsaV3_3G020010.1 vs. TAIR 10
Match: AT3G22600.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 64.7 bits (156), Expect = 7.2e-11
Identity = 41/124 (33.06%), Postives = 62/124 (50.00%), Query Frame = 0


Query: 8   MKKIVAAAVVMVLLGCGGSIGTMAQSEDTSCVNTLIPCLNYVNG-TRDPPESCCNPLRSI 67
           MK  +    + V +    S    AQS  T+ + ++ PCLNY+ G +  P + CCN L  +
Sbjct: 1   MKMEMGLVFLTVFMAVMSSTMVSAQSSCTNALISMSPCLNYITGNSTSPNQQCCNQLSRV 60

Query: 68  INSNPECLCGLISREGSNRAEAAGIDINEAQL--LPARCGEHVNPLS-CLAANNTSGSPS 127
           + S+P+CLC +++  GS      GI++N+ Q   LP  C     P+S C       GS S
Sbjct: 61  VQSSPDCLCQVLNGGGSQ----LGINVNQTQALGLPRACNVQTPPVSRCNTGGGGGGSTS 120

[Close]

BLAST of CsaV3_3G020010.1 vs. TAIR 10
Match: AT2G48130.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 57.4 bits (137), Expect = 1.1e-08
Identity = 34/94 (36.17%), Postives = 51/94 (54.26%), Query Frame = 0


Query: 36  TSCVNTLI---PCLNYVNG-TRDPPESCCNPLRSIINSNPECLCGLISREGSNRAEAAGI 95
           +SCV+TL    PCL+Y+ G +  P + CC+ L S+I S+P+C+C  ++    N     G+
Sbjct: 28  SSCVSTLTTLSPCLSYITGNSTTPSQPCCSRLDSVIKSSPQCICSAVNSPIPN----IGL 87

Query: 96  DINEAQL--LPARCGEHVNPLS-CLAANNTSGSP 123
           +IN  Q   LP  C     PL+ C AA   +  P
Sbjct: 88  NINRTQALQLPNACNIQTPPLTQCNAATGPTAQP 117

[Close]

BLAST of CsaV3_3G020010.1 vs. TAIR 10
Match: AT1G73560.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 55.5 bits (132), Expect = 4.3e-08
Identity = 36/119 (30.25%), Postives = 56/119 (47.06%), Query Frame = 0


Query: 8   MKKIVAAAVVMVLLGCGGSIGTMAQSEDTSCVNTLIPCLNYVNGTR-DPPESCCNPLRSI 67
           + K +A  V +V+L    +       + T+C+  L+PC  Y++     PP SCC P++ I
Sbjct: 3   INKFLAVVVAVVVLYSVEATAQGGNPQLTACLQKLLPCQPYIHSLNPPPPPSCCGPMKEI 62

Query: 68  INSNPECLCGLISREGSNRAEAAGIDINEAQLLPARCGEHVNPLSCLAANNTSGSPSMS 126
           +  +  CLC  I+       +A  +    A LLP  CG  VNP   L +   + SP  S
Sbjct: 63  VEKDAPCLC--IAFNNPEVLKALNLTKENALLLPKACG--VNPDVSLCSKIATPSPIAS 117

[Close]

BLAST of CsaV3_3G020010.1 vs. TAIR 10
Match: AT1G03103.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 55.5 bits (132), Expect = 4.3e-08
Identity = 38/121 (31.40%), Postives = 55/121 (45.45%), Query Frame = 0


Query: 15  AVVMVLLGCGGSIGTMAQSEDTSCVNTLIPCLNYVN-GTRDPPESCCNPLRSIINSNPEC 74
           A+V+     GG+    A   DT  + +L PCL Y+N G+  P  SCC    +++ S+PEC
Sbjct: 7   ALVIATFLYGGATTVQAGCRDT--LTSLSPCLYYLNGGSSSPSWSCCRQFSTVVQSSPEC 66

Query: 75  LCGLISREGSNRAEAAGIDINEAQLL------------PARCGEHVNPLSCLAANNTSGS 123
           LC +++   SN +   G   N    L            P+ C    N  + L AN   GS
Sbjct: 67  LCSVVN---SNESSFYGFKFNRTLALNLPTACNVQTPSPSLCNTGGNVPTTLPANTPVGS 122

The following BLAST results are available for this feature:

BLAST of CsaV3_3G020010.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145619.1	2.5e-74	100.00	lipid transfer-like protein VAS [Cucumis sativus] >KGN57679.1 hypothetical prote...	[more]
XP_008449981.1	3.9e-67	92.57	PREDICTED: lipid transfer-like protein VAS [Cucumis melo]	[more]
KAA0048555.1	1.1e-64	93.62	lipid transfer-like protein VAS [Cucumis melo var. makuwa] >TYK28357.1 lipid tra...	[more]
XP_038901700.1	8.7e-51	77.55	non-specific lipid transfer protein GPI-anchored 30 [Benincasa hispida]	[more]
XP_022983266.1	4.8e-41	64.34	lipid transfer-like protein VAS [Cucurbita maxima]	[more]

BLAST of CsaV3_3G020010.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFY3	3.3e-29	48.48	Non-specific lipid transfer protein GPI-anchored 30 OS=Arabidopsis thaliana OX=3...	[more]
Q9LJ86	1.0e-09	33.06	Non-specific lipid transfer protein GPI-anchored 5 OS=Arabidopsis thaliana OX=37...	[more]
Q7EB72	1.6e-07	36.17	Non-specific lipid transfer protein GPI-anchored 15 OS=Arabidopsis thaliana OX=3...	[more]
F4HZB9	6.1e-07	31.40	Non-specific lipid transfer protein GPI-anchored 19 OS=Arabidopsis thaliana OX=3...	[more]
Q1PFD8	6.1e-07	30.25	Non-specific lipid transfer protein GPI-anchored 9 OS=Arabidopsis thaliana OX=37...	[more]

BLAST of CsaV3_3G020010.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9L7	1.2e-74	100.00	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G250900 PE=3 SV...	[more]
A0A1S3BMN1	1.9e-67	92.57	lipid transfer-like protein VAS OS=Cucumis melo OX=3656 GN=LOC103491702 PE=3 SV=...	[more]
A0A5A7U4K4	5.1e-65	93.62	Lipid transfer-like protein VAS OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A6J1J1M2	2.3e-41	64.34	lipid transfer-like protein VAS OS=Cucurbita maxima OX=3661 GN=LOC111481899 PE=3...	[more]
A0A6J1F9V7	1.3e-39	62.02	lipid transfer-like protein VAS OS=Cucurbita moschata OX=3662 GN=LOC111442128 PE...	[more]

BLAST of CsaV3_3G020010.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13900.1	2.4e-30	48.48	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G22600.1	7.2e-11	33.06	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G48130.1	1.1e-08	36.17	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G73560.1	4.3e-08	30.25	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G03103.1	4.3e-08	31.40	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 34..50 score: 24.07 coord: 90..107 score: 32.39 coord: 54..68 score: 27.79
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 38..112 e-value: 8.8E-4 score: 28.6
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 28..112 e-value: 6.3E-16 score: 58.3
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 36..123 e-value: 2.5E-12 score: 48.5
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 37..114
None	No IPR available	PANTHER	PTHR33044:SF29	LIPID TRANSFER-LIKE PROTEIN VAS	coord: 29..123
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..23 score: 6.0
None	No IPR available	CDD	cd00010	AAI_LTSS	coord: 42..104 e-value: 7.50037E-14 score: 60.5183
IPR043325	Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein	PANTHER	PTHR33044	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED	coord: 29..123

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_3G020010	CsaV3_3G020010	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_3G020010.1.exon1	CsaV3_3G020010.1.exon1	exon
CsaV3_3G020010.1.exon2	CsaV3_3G020010.1.exon2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_3G020010.1.cds1	CsaV3_3G020010.1.cds1	CDS
CsaV3_3G020010.1.cds2	CsaV3_3G020010.1.cds2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_3G020010.1	CsaV3_3G020010.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
molecular_function	GO:0008289	lipid binding