CsaV3_2G010970.1 (mRNA) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G010970.1
TypemRNA
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr2: 8210316 .. 8210474 (+)
Sequence length159
RNA-Seq ExpressionCsaV3_2G010970.1
SyntenyCsaV3_2G010970.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGATAAGAGAAACATATAGAGGTTGGGTTGAGAAGGATGACAAAGAAAGTGTGAGAGAACTAAAAAAGAAGAAGTGGGAGGCTAACACTTGGATTAAAGAAGAAGAAGATGGAGGTTATGCATTTGAGGTTTTGAGCCGTGAATTATTCGGTTAG

mRNA sequence

ATGAAGATAAGAGAAACATATAGAGGTTGGGTTGAGAAGGATGACAAAGAAAGTGTGAGAGAACTAAAAAAGAAGAAGTGGGAGGCTAACACTTGGATTAAAGAAGAAGAAGATGGAGGTTATGCATTTGAGGTTTTGAGCCGTGAATTATTCGGTTAG

Coding sequence (CDS)

ATGAAGATAAGAGAAACATATAGAGGTTGGGTTGAGAAGGATGACAAAGAAAGTGTGAGAGAACTAAAAAAGAAGAAGTGGGAGGCTAACACTTGGATTAAAGAAGAAGAAGATGGAGGTTATGCATTTGAGGTTTTGAGCCGTGAATTATTCGGTTAG

Protein sequence

MKIRETYRGWVEKDDKESVRELKKKKWEANTWIKEEEDGGYAFEVLSRELFG*
Homology
[Close]
BLAST of CsaV3_2G010970.1 vs. NCBI nr
Match: KGN61411.1 (hypothetical protein Csa_006492 [Cucumis sativus])

HSP 1 Score: 110.9 bits (276), Expect = 3.3e-21
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0 

Query: 1  MKIRETYRGWVEKDDKESVRELKKKKWEANTWIKEEEDGGYAFEVLSRELFG 53
          MKIRETYRGWVEKDDKESVRELKKKKWEANTWIKEEEDGGYAFEVLSRELFG
Sbjct: 1  MKIRETYRGWVEKDDKESVRELKKKKWEANTWIKEEEDGGYAFEVLSRELFG 52

[Close]
BLAST of CsaV3_2G010970.1 vs. ExPASy TrEMBL
Match: A0A0A0LN66 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G118340 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.6e-21
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0 

Query: 1  MKIRETYRGWVEKDDKESVRELKKKKWEANTWIKEEEDGGYAFEVLSRELFG 53
          MKIRETYRGWVEKDDKESVRELKKKKWEANTWIKEEEDGGYAFEVLSRELFG
Sbjct: 1  MKIRETYRGWVEKDDKESVRELKKKKWEANTWIKEEEDGGYAFEVLSRELFG 52

The following BLAST results are available for this feature:
BLAST of CsaV3_2G010970.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61411.13.3e-21100.00hypothetical protein Csa_006492 [Cucumis sativus][more]
BLAST of CsaV3_2G010970.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G010970.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LN661.6e-21100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G118340 PE=4 SV=1[more]
BLAST of CsaV3_2G010970.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CsaV3_2G010970CsaV3_2G010970gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsaV3_2G010970.1.exon1CsaV3_2G010970.1.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsaV3_2G010970.1.cds1CsaV3_2G010970.1.cds1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CsaV3_2G010970.1CsaV3_2G010970.1-proteinpolypeptide