CsaV3_1G044850.1 (mRNA) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G044850.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Protein kinase domain-containing protein
Location	chr1: 30320644 .. 30320823 (-)
Sequence length	180
RNA-Seq Expression	CsaV3_1G044850.1
Synteny	CsaV3_1G044850.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTACAGGGAAAGACACAGTACTATCATGGAAATCAAGAGTACAGATTTTGAGAGACTGTGCACTTGCATTGAGATATCTTCATCAACGTGTTGATGGCTGCATTGTCCATAGAGATATTAAGGTAACATCTTACTCTCATCCTACTTTCTTTCTTTCTTTTTCTTTTCAAAATTGA

mRNA sequence

ATGTTTACAGGGAAAGACACAGTACTATCATGGAAATCAAGAGTACAGATTTTGAGAGACTGTGCACTTGCATTGAGATATCTTCATCAACGTGTTGATGGCTGCATTGTCCATAGAGATATTAAGGTAACATCTTACTCTCATCCTACTTTCTTTCTTTCTTTTTCTTTTCAAAATTGA

Coding sequence (CDS)

ATGTTTACAGGGAAAGACACAGTACTATCATGGAAATCAAGAGTACAGATTTTGAGAGACTGTGCACTTGCATTGAGATATCTTCATCAACGTGTTGATGGCTGCATTGTCCATAGAGATATTAAGGTAACATCTTACTCTCATCCTACTTTCTTTCTTTCTTTTTCTTTTCAAAATTGA

Protein sequence

MFTGKDTVLSWKSRVQILRDCALALRYLHQRVDGCIVHRDIKVTSYSHPTFFLSFSFQN*

Homology

[Close]

BLAST of CsaV3_1G044850.1 vs. NCBI nr
Match: KGN66710.1 (hypothetical protein Csa_006953 [Cucumis sativus])

HSP 1 Score: 127.1 bits (318), Expect = 5.1e-26
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0


Query: 1  MFTGKDTVLSWKSRVQILRDCALALRYLHQRVDGCIVHRDIKVTSYSHPTFFLSFSFQN 60
          MFTGKDTVLSWKSRVQILRDCALALRYLHQRVDGCIVHRDIKVTSYSHPTFFLSFSFQN
Sbjct: 1  MFTGKDTVLSWKSRVQILRDCALALRYLHQRVDGCIVHRDIKVTSYSHPTFFLSFSFQN 59

[Close]

BLAST of CsaV3_1G044850.1 vs. NCBI nr
Match: XP_008444026.1 (PREDICTED: cysteine-rich receptor-like protein kinase 1 [Cucumis melo])

HSP 1 Score: 85.9 bits (211), Expect = 1.3e-13
Identity = 39/41 (95.12%), Postives = 41/41 (100.00%), Query Frame = 0


Query: 5   KDTVLSWKSRVQILRDCALALRYLHQRVDGCIVHRDIKVTS 46
           KDTVLSWKSRVQILRDCALALRYLHQRVDGCIVHRDIK+T+
Sbjct: 219 KDTVLSWKSRVQILRDCALALRYLHQRVDGCIVHRDIKLTN 259

[Close]

BLAST of CsaV3_1G044850.1 vs. NCBI nr
Match: KAA0038318.1 (cysteine-rich receptor-like protein kinase 1 [Cucumis melo var. makuwa])

HSP 1 Score: 85.9 bits (211), Expect = 1.3e-13
Identity = 39/41 (95.12%), Postives = 41/41 (100.00%), Query Frame = 0


Query: 5   KDTVLSWKSRVQILRDCALALRYLHQRVDGCIVHRDIKVTS 46
           KDTVLSWKSRVQILRDCALALRYLHQRVDGCIVHRDIK+T+
Sbjct: 341 KDTVLSWKSRVQILRDCALALRYLHQRVDGCIVHRDIKLTN 381

[Close]

BLAST of CsaV3_1G044850.1 vs. NCBI nr
Match: XP_031742672.1 (putative serine/threonine-protein kinase [Cucumis sativus])

HSP 1 Score: 85.9 bits (211), Expect = 1.3e-13
Identity = 39/41 (95.12%), Postives = 41/41 (100.00%), Query Frame = 0


Query: 5   KDTVLSWKSRVQILRDCALALRYLHQRVDGCIVHRDIKVTS 46
           KDTVLSWKSRVQILRDCALALRYLHQRVDGCIVHRDIK+T+
Sbjct: 142 KDTVLSWKSRVQILRDCALALRYLHQRVDGCIVHRDIKLTN 182

[Close]

BLAST of CsaV3_1G044850.1 vs. NCBI nr
Match: XP_022152108.1 (probable leucine-rich repeat receptor-like protein kinase At5g49770 [Momordica charantia])

HSP 1 Score: 78.2 bits (191), Expect = 2.7e-11
Identity = 35/41 (85.37%), Postives = 39/41 (95.12%), Query Frame = 0


Query: 5   KDTVLSWKSRVQILRDCALALRYLHQRVDGCIVHRDIKVTS 46
           KDTVL+W+ RVQILRDCALALRYLHQ VDGCIVHRDIK+T+
Sbjct: 350 KDTVLTWELRVQILRDCALALRYLHQYVDGCIVHRDIKLTN 390

[Close]

BLAST of CsaV3_1G044850.1 vs. ExPASy Swiss-Prot
Match: Q9M3E5 (Putative L-type lectin-domain containing receptor kinase I.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK11 PE=3 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 6.7e-05
Identity = 22/45 (48.89%), Postives = 27/45 (60.00%), Query Frame = 0


Query: 1   MFTGKDTVLSWKSRVQILRDCALALRYLHQRVDGCIVHRDIKVTS 46
           +F G    LSW  RV ILRD A AL YLH      ++HRDIK ++
Sbjct: 433 LFHGDKPPLSWSQRVSILRDIASALCYLHTGASQVVLHRDIKASN 477

[Close]

BLAST of CsaV3_1G044850.1 vs. ExPASy Swiss-Prot
Match: Q7FK82 (Probable L-type lectin-domain containing receptor kinase I.2 OS=Arabidopsis thaliana OX=3702 GN=LECRK12 PE=2 SV=2)

HSP 1 Score: 46.6 bits (109), Expect = 1.2e-04
Identity = 21/45 (46.67%), Postives = 27/45 (60.00%), Query Frame = 0


Query: 1   MFTGKDTVLSWKSRVQILRDCALALRYLHQRVDGCIVHRDIKVTS 46
           +F G    LSW  R+ ILRD A AL YLH      ++HRDIK ++
Sbjct: 436 LFNGDKPPLSWSQRLAILRDIASALCYLHTGASQVVLHRDIKASN 480

[Close]

BLAST of CsaV3_1G044850.1 vs. ExPASy Swiss-Prot
Match: O81069 (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana OX=3702 GN=At2g28990 PE=1 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 4.4e-04
Identity = 21/38 (55.26%), Postives = 27/38 (71.05%), Query Frame = 0


Query: 8   VLSWKSRVQILRDCALALRYLHQRVDGCIVHRDIKVTS 46
           VLSW+SR++I+ D AL L YLH      +VHRDIK T+
Sbjct: 670 VLSWESRLKIVLDAALGLEYLHTGCVPPMVHRDIKTTN 707

[Close]

BLAST of CsaV3_1G044850.1 vs. ExPASy Swiss-Prot
Match: Q9FJI4 (Putative L-type lectin-domain containing receptor kinase I.11 OS=Arabidopsis thaliana OX=3702 GN=LECRK111 PE=3 SV=1)

HSP 1 Score: 43.9 bits (102), Expect = 7.5e-04
Identity = 19/45 (42.22%), Postives = 28/45 (62.22%), Query Frame = 0


Query: 1   MFTGKDTVLSWKSRVQILRDCALALRYLHQRVDGCIVHRDIKVTS 46
           +F  +   LSW  R+ IL+D A AL YLH   +  ++HRDIK ++
Sbjct: 433 LFHREKPALSWSQRLVILKDIASALSYLHTGANQVVLHRDIKASN 477

[Close]

BLAST of CsaV3_1G044850.1 vs. ExPASy Swiss-Prot
Match: Q9M3D7 (Putative L-type lectin-domain containing receptor kinase I.4 OS=Arabidopsis thaliana OX=3702 GN=LECRK14 PE=3 SV=1)

HSP 1 Score: 43.9 bits (102), Expect = 7.5e-04
Identity = 18/45 (40.00%), Postives = 28/45 (62.22%), Query Frame = 0


Query: 1   MFTGKDTVLSWKSRVQILRDCALALRYLHQRVDGCIVHRDIKVTS 46
           +F  ++   SW  R+ IL+D A AL YLH   +  ++HRDIK ++
Sbjct: 435 LFYNQNPSPSWLQRISILKDIASALNYLHSGANPAVLHRDIKASN 479

[Close]

BLAST of CsaV3_1G044850.1 vs. ExPASy TrEMBL
Match: A0A0A0LXX1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G662500 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.5e-26
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0


Query: 1  MFTGKDTVLSWKSRVQILRDCALALRYLHQRVDGCIVHRDIKVTSYSHPTFFLSFSFQN 60
          MFTGKDTVLSWKSRVQILRDCALALRYLHQRVDGCIVHRDIKVTSYSHPTFFLSFSFQN
Sbjct: 1  MFTGKDTVLSWKSRVQILRDCALALRYLHQRVDGCIVHRDIKVTSYSHPTFFLSFSFQN 59

[Close]

BLAST of CsaV3_1G044850.1 vs. ExPASy TrEMBL
Match: A0A5A7T626 (Cysteine-rich receptor-like protein kinase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G001880 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 6.3e-14
Identity = 39/41 (95.12%), Postives = 41/41 (100.00%), Query Frame = 0


Query: 5   KDTVLSWKSRVQILRDCALALRYLHQRVDGCIVHRDIKVTS 46
           KDTVLSWKSRVQILRDCALALRYLHQRVDGCIVHRDIK+T+
Sbjct: 341 KDTVLSWKSRVQILRDCALALRYLHQRVDGCIVHRDIKLTN 381

[Close]

BLAST of CsaV3_1G044850.1 vs. ExPASy TrEMBL
Match: A0A1S3BA67 (cysteine-rich receptor-like protein kinase 1 OS=Cucumis melo OX=3656 GN=LOC103487474 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 6.3e-14
Identity = 39/41 (95.12%), Postives = 41/41 (100.00%), Query Frame = 0


Query: 5   KDTVLSWKSRVQILRDCALALRYLHQRVDGCIVHRDIKVTS 46
           KDTVLSWKSRVQILRDCALALRYLHQRVDGCIVHRDIK+T+
Sbjct: 219 KDTVLSWKSRVQILRDCALALRYLHQRVDGCIVHRDIKLTN 259

[Close]

BLAST of CsaV3_1G044850.1 vs. ExPASy TrEMBL
Match: A0A6J1DDZ1 (probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Momordica charantia OX=3673 GN=LOC111019897 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.3e-11
Identity = 35/41 (85.37%), Postives = 39/41 (95.12%), Query Frame = 0


Query: 5   KDTVLSWKSRVQILRDCALALRYLHQRVDGCIVHRDIKVTS 46
           KDTVL+W+ RVQILRDCALALRYLHQ VDGCIVHRDIK+T+
Sbjct: 350 KDTVLTWELRVQILRDCALALRYLHQYVDGCIVHRDIKLTN 390

[Close]

BLAST of CsaV3_1G044850.1 vs. ExPASy TrEMBL
Match: A0A6J1KSD4 (probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Cucurbita maxima OX=3661 GN=LOC111496822 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.8e-11
Identity = 33/41 (80.49%), Postives = 39/41 (95.12%), Query Frame = 0


Query: 5   KDTVLSWKSRVQILRDCALALRYLHQRVDGCIVHRDIKVTS 46
           KDT+LSW++RV+ILR CALALRYLHQR DGCIVHRDIK+T+
Sbjct: 384 KDTLLSWETRVKILRQCALALRYLHQRADGCIVHRDIKLTN 424

[Close]

BLAST of CsaV3_1G044850.1 vs. TAIR 10
Match: AT3G45330.1 (Concanavalin A-like lectin protein kinase family protein )

HSP 1 Score: 47.4 bits (111), Expect = 4.8e-06
Identity = 22/45 (48.89%), Postives = 27/45 (60.00%), Query Frame = 0


Query: 1   MFTGKDTVLSWKSRVQILRDCALALRYLHQRVDGCIVHRDIKVTS 46
           +F G    LSW  RV ILRD A AL YLH      ++HRDIK ++
Sbjct: 433 LFHGDKPPLSWSQRVSILRDIASALCYLHTGASQVVLHRDIKASN 477

[Close]

BLAST of CsaV3_1G044850.1 vs. TAIR 10
Match: AT3G59110.1 (Protein kinase superfamily protein )

HSP 1 Score: 47.0 bits (110), Expect = 6.3e-06
Identity = 19/42 (45.24%), Postives = 31/42 (73.81%), Query Frame = 0


Query: 4   GKDTVLSWKSRVQILRDCALALRYLHQRVDGCIVHRDIKVTS 46
           GK + L+W++R++IL   A AL YLH+ ++  +VHRDIK ++
Sbjct: 280 GKQSTLTWEARMKILVGTAQALAYLHEAIEPKVVHRDIKASN 321

[Close]

BLAST of CsaV3_1G044850.1 vs. TAIR 10
Match: AT2G28990.1 (Leucine-rich repeat protein kinase family protein )

HSP 1 Score: 44.7 bits (104), Expect = 3.1e-05
Identity = 21/38 (55.26%), Postives = 27/38 (71.05%), Query Frame = 0


Query: 8   VLSWKSRVQILRDCALALRYLHQRVDGCIVHRDIKVTS 46
           VLSW+SR++I+ D AL L YLH      +VHRDIK T+
Sbjct: 670 VLSWESRLKIVLDAALGLEYLHTGCVPPMVHRDIKTTN 707

[Close]

BLAST of CsaV3_1G044850.1 vs. TAIR 10
Match: AT3G46400.1 (Leucine-rich repeat protein kinase family protein )

HSP 1 Score: 44.3 bits (103), Expect = 4.1e-05
Identity = 20/40 (50.00%), Postives = 26/40 (65.00%), Query Frame = 0


Query: 6   DTVLSWKSRVQILRDCALALRYLHQRVDGCIVHRDIKVTS 46
           D+VL W +R+QI  D AL L YLH      +VHRD+K T+
Sbjct: 667 DSVLEWTTRLQIAVDVALGLEYLHYGCRPSMVHRDVKSTN 706

[Close]

BLAST of CsaV3_1G044850.1 vs. TAIR 10
Match: AT3G45420.1 (Concanavalin A-like lectin protein kinase family protein )

HSP 1 Score: 43.9 bits (102), Expect = 5.3e-05
Identity = 18/45 (40.00%), Postives = 28/45 (62.22%), Query Frame = 0


Query: 1   MFTGKDTVLSWKSRVQILRDCALALRYLHQRVDGCIVHRDIKVTS 46
           +F  ++   SW  R+ IL+D A AL YLH   +  ++HRDIK ++
Sbjct: 435 LFYNQNPSPSWLQRISILKDIASALNYLHSGANPAVLHRDIKASN 479

The following BLAST results are available for this feature:

BLAST of CsaV3_1G044850.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN66710.1	5.1e-26	100.00	hypothetical protein Csa_006953 [Cucumis sativus]	[more]
XP_008444026.1	1.3e-13	95.12	PREDICTED: cysteine-rich receptor-like protein kinase 1 [Cucumis melo]	[more]
KAA0038318.1	1.3e-13	95.12	cysteine-rich receptor-like protein kinase 1 [Cucumis melo var. makuwa]	[more]
XP_031742672.1	1.3e-13	95.12	putative serine/threonine-protein kinase [Cucumis sativus]	[more]
XP_022152108.1	2.7e-11	85.37	probable leucine-rich repeat receptor-like protein kinase At5g49770 [Momordica c...	[more]

BLAST of CsaV3_1G044850.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M3E5	6.7e-05	48.89	Putative L-type lectin-domain containing receptor kinase I.1 OS=Arabidopsis thal...	[more]
Q7FK82	1.2e-04	46.67	Probable L-type lectin-domain containing receptor kinase I.2 OS=Arabidopsis thal...	[more]
O81069	4.4e-04	55.26	Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidops...	[more]
Q9FJI4	7.5e-04	42.22	Putative L-type lectin-domain containing receptor kinase I.11 OS=Arabidopsis tha...	[more]
Q9M3D7	7.5e-04	40.00	Putative L-type lectin-domain containing receptor kinase I.4 OS=Arabidopsis thal...	[more]

BLAST of CsaV3_1G044850.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXX1	2.5e-26	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G662500 PE=4 SV=1	[more]
A0A5A7T626	6.3e-14	95.12	Cysteine-rich receptor-like protein kinase 1 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A1S3BA67	6.3e-14	95.12	cysteine-rich receptor-like protein kinase 1 OS=Cucumis melo OX=3656 GN=LOC10348...	[more]
A0A6J1DDZ1	1.3e-11	85.37	probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Momordica...	[more]
A0A6J1KSD4	3.8e-11	80.49	probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Cucurbita...	[more]

BLAST of CsaV3_1G044850.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G45330.1	4.8e-06	48.89	Concanavalin A-like lectin protein kinase family protein	[more]
AT3G59110.1	6.3e-06	45.24	Protein kinase superfamily protein	[more]
AT2G28990.1	3.1e-05	55.26	Leucine-rich repeat protein kinase family protein	[more]
AT3G46400.1	4.1e-05	50.00	Leucine-rich repeat protein kinase family protein	[more]
AT3G45420.1	5.3e-05	40.00	Concanavalin A-like lectin protein kinase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.510.10	Transferase(Phosphotransferase) domain 1	coord: 2..45 e-value: 5.8E-9 score: 37.6
None	No IPR available	PANTHER	PTHR47989	OS01G0750732 PROTEIN	coord: 5..45
None	No IPR available	PANTHER	PTHR47989:SF4	CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 40	coord: 5..45
IPR011009	Protein kinase-like domain superfamily	SUPERFAMILY	56112	Protein kinase-like (PK-like)	coord: 7..43

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_1G044850	CsaV3_1G044850	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_1G044850.1.exon1	CsaV3_1G044850.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_1G044850.1.cds1	CsaV3_1G044850.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_1G044850.1	CsaV3_1G044850.1-protein	polypeptide