CsaV3_1G013910.1 (mRNA) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAACATCCTGTGCTCTTTGATCTTCTTTTCCCTTCTTTTGTTTTCATTAAAGGCAACATCCCAAGAAGTTGGTGAGCTCCCAAATTATGAACTTTTTTTTTCTCCACTCCAACCTGCTTTAAATATTTTAGTTCAGTTGTAATTGAAAGATCCGTTCGAAAAATTAGGGAATCTCACAATATTTATGAGATTTCATGAACTATGTATTTCTTATTTAGAGATAAAACCTCATGTTTTTTAATATGATATCTTAGGCTCATGAAGTCTAAATGGGTATCCCATCATCTCAAATTATAAAATAAAGAGACCTCACAATCTTTTTTAACGGACTTGTACGAGCTACTTCTCTCAATGTCATCAATTATTAGTTTTGACATAGAGATAATAGTTTTATACTCTAAAATATTTTTCAATTATACTCTTTTCCTTGGTGAATGTTAAATTTTTTTTTTTTTTTATGAATATGATGATATGAGTAGTAGACGAGAATAATACTTGGGAAGAGTTAACGTAGATTTATAAAGGGAGGAGTCAAACCACCTATAAGAGAAAATGTTTCTAAATCATTTCTAACATTTTAAGATTATGGTATAAATTTGGCATTGAAGATTATTCAGTTTTTTTCTTCAAATTGTATATTATTTGTTTAAGGATTATGATTGTTTATGCAGAGAATGAAAGAGGGTTTGATTATGAAAGAGATGGGGAAAAAGGACCAACCCATTGGGGAGAGCTTAGAGCAGAGTGGCATAAATGCAAGGGTGGGTTAATGCAATCTCCAATTGATCTATTGCATGAAAGAGTTGAAGTTATTTCACATTTGGGAGACCTTCAAATCAACTACAAATCTTCTAATGCCACACTCAAGAATAGAGGCCATGACATGATGGTAATTAAATTCCTTTTTCCTAGCTAGGATTAAACCAACTTTTGTTATATATAAAATCATTCTCTCTATATATATAAAACATGCTTTTAATAATCTAAAATCAATTTTTAACGTACGATAACTTTATATAAAAGTTTTTTTTTTTAATACGATAATCTTGGATATGAAAGATCGAACCTCCAATCCTAGAGGTTGAAAAAGACCACGTCAATTACCAAATTGAGTTATATGCTTACTTCGACACGTATAGAAGTATGTTAAATCATTAGATTGATATTAAATAATAATATTAAACACATATGTGTTCGTTTGTAACTTCAAATAAAAAAAAAAACACATTTTTCTCCCCAAGTATTGGGTCTAGTTTTCATTTGGTTCATAGGTGTCAAAATAGGTTGCACTTTTATTCTTAAGTTTTGATTTTGATTTCAATCTAGTCTCTCGATTTCAAAGTACTTATAACTTTACCCTTAAAATTTAAGTTTTGTTTCAATTGGATTTATATTATCTTCAAGAGACTTACACTTTCACGACGTTGATTTTTCACTCAATAATACTAACTTTGATTTAATGAAAAAAAAATGATTCTATTCATTATTTTAAAATCATGGTTGATCGATGAATTATATATATACGTATAACATATATGCTGCATGTAAAAAAGAAGGTGTATTTGTGGTTATACAGATGAAATGGGTGGATGGAGGTGGATACATGGAGATGAATGGAACTCAATATAAACTAAAACAGTGTCATTGGCACTCACCTTCTGAGCACACCATTGATGGCAAGACTTTCGATCTTGAAGCTCACTTAGTTCATGAAAGCTCAAATGGAATGATTTCTGTCATTGGAATCTTGTATCAAATTGGAGAACCCGATTACTTCTTATCAACGGTCAGTTGTTTAATCCATAATTGAGTCGTCATAGTTGATAAACAATTTAGATTTTGTTTTATCTTTCAAATTCACTAAACTTAATGGATATAAATTTGACAAATAGTTGTTTTTAGATTATCTATGATCTAACCGTCTAAATTCTAAATAAACTAACATTGTTTAGAGTTTTTTGACATTTAAATATTGTAGAGTCAAACGAGGGTGTCTTGAAAATTTAGTGAAGACAGGTAAATTGGGTTTGAATACTCGTAATAATATAGAAAAAAATATATATTTGATTCAAATTTTGAAAATTGAAATGAATTATAATATAGAAAAAAAAGATAAAGTTATAGTATTTCATGTCATAAAGTACTCCATTTATTATTTTTTTCAAATGTAAACATGTACATATAATAAAATTATAAATTACATACTTAATATTATATTATAAAATAATAAATATACAGAAGAGACATTTTTAAAAATAGCAAAATAACCTAAAATATTTAAACATATAACAAAATTTTAGATTCTATGAAAGATTGACCTTAATAAACTTTTATGATTGTCTATCAATATGACTGATAGAAGCATATAAATGTCTATCAATAATATAATCTGAAATTTTGCTATATCTTATAAATATTTTGTCAAAATTATAATTTTAAACGATTCTTTTAAAAATATTTATATATTAACCTAGATATTAGTAGGGCAGCTACAGCGTCTCTGAACGAGATCCCAATTTGGGTACGTGGTAAAAACTATATATATGAAAATATGAAATACAACACACAATAACTGCCTAAATTTTGTGGAAAAGGTTTGAATTAATAAACATTGTTTGATCAATATTGTGATGGTATCAGATCGAAGAAGATTTAGAAGTGGCCTCAAATACACATGAAGAGGAGAGAGTGATTGGAATAATTGATCCAAATATATTGAAAATGGGTAGCAAACAATATTATAGATACATTGGCTCACTTACTGTTCCACCATGCACTGAAAATGTTATGTGGACTATCATTCACCAGGTACATTATTATTTTTCTTTTTCCAATACTAAATTTCAATATATATTAGAAATAATTATGTCAAATATGTATGGTTTTTTGTTTTTATCATAGAAAATAAACAACTAAAAACTAAAATTTCATTTCTAATCTTTTATTTGAAAACATACCTTACCACCTTCTCTTCCACGTCTGAATCTCTTATTAGATTTAAAAGCTTGTTTTTGTTTTTTTGAATTAAGTTATGAATGCAACTAAGATTGATACAAGCAATCGTAAAAAAAATGAAAGGAAGTAGATTTATTGTTTGAAAATGAAAAACAAAAACGAAAAAAATGTTTGAACACATAACCTATATGGGATTATTCTAAAATTTTAACAATTATGCTGATTTTAGCTAATTGCTTAAACAATAAAACTTATATAGTATATTTATATATTCATGCACTATAATTGCTAACTACATGATTTCAATAGGTGAGGACTGTTACAGAAGAGCAAGTAAAATTACTTCGAGTGGCTGTCCATGATGTAAGTTAATTGGAATGATTTTTATTATTTTTCTAAACCCTAAGCGTGTGGTTATTTGATTGATGAAATAATTAATCCTTTAATTTTGATTTCCACCATAGAAAATAAATGGATCATCTGCCATCCCAAATAATTCTATAAGCCTAGGTAGCCAAAATTCTGTAAAATTGAGAAATTCATTATTAAATTAGTAGATCCTATGTGAATAAAGAAAATAATAATTGTGGAATAATCTTACAGCTTCAAGGAAGTAAAAATTGGTATGAATTTTATATTTCAATTGGAGAAGATAGTAAAATAAAAAAAAACTTTACTTAACCCACTTAAAAGAAAGGTTTGATATGTGAAAACAGGACTCGGATTCTAATGCAAGACCATTGCAACCCTTCTACGATAGAACAATGCAACTCCAAAGATCCAAAGAAAGTGAGCAATGA ATGGGAAACATCCTGTGCTCTTTGATCTTCTTTTCCCTTCTTTTGTTTTCATTAAAGGCAACATCCCAAGAAGTTGAGAATGAAAGAGGGTTTGATTATGAAAGAGATGGGGAAAAAGGACCAACCCATTGGGGAGAGCTTAGAGCAGAGTGGCATAAATGCAAGGGTGGGTTAATGCAATCTCCAATTGATCTATTGCATGAAAGAGTTGAAGTTATTTCACATTTGGGAGACCTTCAAATCAACTACAAATCTTCTAATGCCACACTCAAGAATAGAGGCCATGACATGATGATGAAATGGGTGGATGGAGGTGGATACATGGAGATGAATGGAACTCAATATAAACTAAAACAGTGTCATTGGCACTCACCTTCTGAGCACACCATTGATGGCAAGACTTTCGATCTTGAAGCTCACTTAGTTCATGAAAGCTCAAATGGAATGATTTCTGTCATTGGAATCTTGTATCAAATTGGAGAACCCGATTACTTCTTATCAACGATCGAAGAAGATTTAGAAGTGGCCTCAAATACACATGAAGAGGAGAGAGTGATTGGAATAATTGATCCAAATATATTGAAAATGGGTAGCAAACAATATTATAGATACATTGGCTCACTTACTGTTCCACCATGCACTGAAAATGTTATGTGGACTATCATTCACCAGGTGAGGACTGTTACAGAAGAGCAAGTAAAATTACTTCGAGTGGCTGTCCATGATGACTCGGATTCTAATGCAAGACCATTGCAACCCTTCTACGATAGAACAATGCAACTCCAAAGATCCAAAGAAAGTGAGCAATGA ATGGGAAACATCCTGTGCTCTTTGATCTTCTTTTCCCTTCTTTTGTTTTCATTAAAGGCAACATCCCAAGAAGTTGAGAATGAAAGAGGGTTTGATTATGAAAGAGATGGGGAAAAAGGACCAACCCATTGGGGAGAGCTTAGAGCAGAGTGGCATAAATGCAAGGGTGGGTTAATGCAATCTCCAATTGATCTATTGCATGAAAGAGTTGAAGTTATTTCACATTTGGGAGACCTTCAAATCAACTACAAATCTTCTAATGCCACACTCAAGAATAGAGGCCATGACATGATGATGAAATGGGTGGATGGAGGTGGATACATGGAGATGAATGGAACTCAATATAAACTAAAACAGTGTCATTGGCACTCACCTTCTGAGCACACCATTGATGGCAAGACTTTCGATCTTGAAGCTCACTTAGTTCATGAAAGCTCAAATGGAATGATTTCTGTCATTGGAATCTTGTATCAAATTGGAGAACCCGATTACTTCTTATCAACGATCGAAGAAGATTTAGAAGTGGCCTCAAATACACATGAAGAGGAGAGAGTGATTGGAATAATTGATCCAAATATATTGAAAATGGGTAGCAAACAATATTATAGATACATTGGCTCACTTACTGTTCCACCATGCACTGAAAATGTTATGTGGACTATCATTCACCAGGTGAGGACTGTTACAGAAGAGCAAGTAAAATTACTTCGAGTGGCTGTCCATGATGACTCGGATTCTAATGCAAGACCATTGCAACCCTTCTACGATAGAACAATGCAACTCCAAAGATCCAAAGAAAGTGAGCAATGA MGNILCSLIFFSLLLFSLKATSQEVENERGFDYERDGEKGPTHWGELRAEWHKCKGGLMQSPIDLLHERVEVISHLGDLQINYKSSNATLKNRGHDMMMKWVDGGGYMEMNGTQYKLKQCHWHSPSEHTIDGKTFDLEAHLVHESSNGMISVIGILYQIGEPDYFLSTIEEDLEVASNTHEEERVIGIIDPNILKMGSKQYYRYIGSLTVPPCTENVMWTIIHQVRTVTEEQVKLLRVAVHDDSDSNARPLQPFYDRTMQLQRSKESEQ* Homology
BLAST of CsaV3_1G013910.1 vs. NCBI nr
Match: XP_004139554.1 (alpha carbonic anhydrase 7 [Cucumis sativus] >KAE8652771.1 hypothetical protein Csa_022740 [Cucumis sativus]) HSP 1 Score: 554.7 bits (1428), Expect = 4.5e-154 Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0
BLAST of CsaV3_1G013910.1 vs. NCBI nr
Match: XP_038895739.1 (alpha carbonic anhydrase 7-like [Benincasa hispida]) HSP 1 Score: 500.7 bits (1288), Expect = 7.6e-138 Identity = 242/269 (89.96%), Postives = 254/269 (94.42%), Query Frame = 0
BLAST of CsaV3_1G013910.1 vs. NCBI nr
Match: XP_016902846.1 (PREDICTED: LOW QUALITY PROTEIN: alpha carbonic anhydrase 7-like [Cucumis melo]) HSP 1 Score: 490.7 bits (1262), Expect = 7.9e-135 Identity = 232/243 (95.47%), Postives = 240/243 (98.77%), Query Frame = 0
BLAST of CsaV3_1G013910.1 vs. NCBI nr
Match: XP_022152913.1 (alpha carbonic anhydrase 7-like [Momordica charantia]) HSP 1 Score: 466.8 bits (1200), Expect = 1.2e-127 Identity = 221/268 (82.46%), Postives = 244/268 (91.04%), Query Frame = 0
BLAST of CsaV3_1G013910.1 vs. NCBI nr
Match: KAG6583572.1 (Alpha carbonic anhydrase 7, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 465.7 bits (1197), Expect = 2.7e-127 Identity = 219/268 (81.72%), Postives = 244/268 (91.04%), Query Frame = 0
BLAST of CsaV3_1G013910.1 vs. ExPASy Swiss-Prot
Match: Q8L817 (Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana OX=3702 GN=ACA7 PE=2 SV=1) HSP 1 Score: 304.3 bits (778), Expect = 1.4e-81 Identity = 139/255 (54.51%), Postives = 194/255 (76.08%), Query Frame = 0
BLAST of CsaV3_1G013910.1 vs. ExPASy Swiss-Prot
Match: Q84UV8 (Bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3 OS=Nicotiana langsdorffii x Nicotiana sanderae OX=164110 GN=NEC3 PE=1 SV=1) HSP 1 Score: 282.0 bits (720), Expect = 7.3e-75 Identity = 143/256 (55.86%), Postives = 186/256 (72.66%), Query Frame = 0
BLAST of CsaV3_1G013910.1 vs. ExPASy Swiss-Prot
Match: F4HUC4 (Alpha carbonic anhydrase 5 OS=Arabidopsis thaliana OX=3702 GN=ACA5 PE=3 SV=1) HSP 1 Score: 272.7 bits (696), Expect = 4.4e-72 Identity = 133/256 (51.95%), Postives = 180/256 (70.31%), Query Frame = 0
BLAST of CsaV3_1G013910.1 vs. ExPASy Swiss-Prot
Match: Q9FM99 (Alpha carbonic anhydrase 8 OS=Arabidopsis thaliana OX=3702 GN=ACA8 PE=3 SV=3) HSP 1 Score: 262.3 bits (669), Expect = 6.0e-69 Identity = 132/248 (53.23%), Postives = 167/248 (67.34%), Query Frame = 0
BLAST of CsaV3_1G013910.1 vs. ExPASy Swiss-Prot
Match: F4IHR4 (Alpha carbonic anhydrase 2 OS=Arabidopsis thaliana OX=3702 GN=ACA2 PE=2 SV=2) HSP 1 Score: 246.9 bits (629), Expect = 2.6e-64 Identity = 110/206 (53.40%), Postives = 154/206 (74.76%), Query Frame = 0
BLAST of CsaV3_1G013910.1 vs. ExPASy TrEMBL
Match: A0A1S4E3N8 (Carbonic anhydrase OS=Cucumis melo OX=3656 GN=LOC103502435 PE=3 SV=1) HSP 1 Score: 490.7 bits (1262), Expect = 3.8e-135 Identity = 232/243 (95.47%), Postives = 240/243 (98.77%), Query Frame = 0
BLAST of CsaV3_1G013910.1 vs. ExPASy TrEMBL
Match: A0A6J1DG52 (Carbonic anhydrase OS=Momordica charantia OX=3673 GN=LOC111020526 PE=3 SV=1) HSP 1 Score: 466.8 bits (1200), Expect = 5.9e-128 Identity = 221/268 (82.46%), Postives = 244/268 (91.04%), Query Frame = 0
BLAST of CsaV3_1G013910.1 vs. ExPASy TrEMBL
Match: A0A6J1I0A8 (Carbonic anhydrase OS=Cucurbita maxima OX=3661 GN=LOC111469326 PE=3 SV=1) HSP 1 Score: 465.7 bits (1197), Expect = 1.3e-127 Identity = 219/268 (81.72%), Postives = 243/268 (90.67%), Query Frame = 0
BLAST of CsaV3_1G013910.1 vs. ExPASy TrEMBL
Match: A0A6J1HPL0 (Carbonic anhydrase OS=Cucurbita moschata OX=3662 GN=LOC111464882 PE=3 SV=1) HSP 1 Score: 465.3 bits (1196), Expect = 1.7e-127 Identity = 219/268 (81.72%), Postives = 243/268 (90.67%), Query Frame = 0
BLAST of CsaV3_1G013910.1 vs. ExPASy TrEMBL
Match: A0A6J1DHJ2 (Carbonic anhydrase OS=Momordica charantia OX=3673 GN=LOC111020525 PE=3 SV=1) HSP 1 Score: 457.2 bits (1175), Expect = 4.7e-125 Identity = 217/268 (80.97%), Postives = 239/268 (89.18%), Query Frame = 0
BLAST of CsaV3_1G013910.1 vs. TAIR 10
Match: AT1G08080.1 (alpha carbonic anhydrase 7 ) HSP 1 Score: 304.3 bits (778), Expect = 9.8e-83 Identity = 139/255 (54.51%), Postives = 194/255 (76.08%), Query Frame = 0
BLAST of CsaV3_1G013910.1 vs. TAIR 10
Match: AT1G08065.1 (alpha carbonic anhydrase 5 ) HSP 1 Score: 272.7 bits (696), Expect = 3.2e-73 Identity = 133/256 (51.95%), Postives = 180/256 (70.31%), Query Frame = 0
BLAST of CsaV3_1G013910.1 vs. TAIR 10
Match: AT2G28210.1 (alpha carbonic anhydrase 2 ) HSP 1 Score: 244.6 bits (623), Expect = 9.2e-65 Identity = 109/204 (53.43%), Postives = 152/204 (74.51%), Query Frame = 0
BLAST of CsaV3_1G013910.1 vs. TAIR 10
Match: AT4G20990.1 (alpha carbonic anhydrase 4 ) HSP 1 Score: 228.8 bits (582), Expect = 5.2e-60 Identity = 109/253 (43.08%), Postives = 162/253 (64.03%), Query Frame = 0
BLAST of CsaV3_1G013910.1 vs. TAIR 10
Match: AT4G21000.1 (alpha carbonic anhydrase 6 ) HSP 1 Score: 208.8 bits (530), Expect = 5.6e-54 Identity = 104/225 (46.22%), Postives = 152/225 (67.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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