CsGy7G008735.1 (mRNA) Cucumber (Gy14) v2.1

Overview


Name	CsGy7G008735.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr7: 10697434 .. 10697754 (-)
Sequence length	321
RNA-Seq Expression	CsGy7G008735.1
Synteny	CsGy7G008735.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAACACCCCCACCATCTTCTTTCTCCTTCTCCCTTTTCCCGTAACCTACCCAGCAGCAACCTACCTTCTTCTCTTCTTCTTTCTATTTTCCGTTCTATTCTACAGCCAACCACCTTTCGATCTCACGTCGACTGCCTAGCTCATCACGTCCTGAACTGTCGTGTACCAGTTTTGTTCGTGTGGTTCTTCATCTATTGGTCGGGGATCGTCTGCAGCGTCTTCATCCGCCAACCACCAACTCCATCAGGTCTTCATCCGCTACCTGTTAAGCAACCGTCGTCAGGTGCCTACTGTGAACCTGAGTCGAACCCAAGCTGA

mRNA sequence

ATGCAACACCCCCACCATCTTCTTTCTCCTTCTCCCTTTTCCCGTAACCTACCCAGCAGCAACCTACCTTCTTCTCTTCTTCTTTCTATTTTCCGTTCTATTCTACAGCCAACCACCTTTCGATCTCACGTCGACTGCCTAGCTCATCACGTCCTGAACTGTCGTGTACCAGTTTTGTTCGTGTGGTTCTTCATCTATTGGTCGGGGATCGTCTGCAGCGTCTTCATCCGCCAACCACCAACTCCATCAGGTCTTCATCCGCTACCTGTTAAGCAACCGTCGTCAGGTGCCTACTGTGAACCTGAGTCGAACCCAAGCTGA

Coding sequence (CDS)

ATGCAACACCCCCACCATCTTCTTTCTCCTTCTCCCTTTTCCCGTAACCTACCCAGCAGCAACCTACCTTCTTCTCTTCTTCTTTCTATTTTCCGTTCTATTCTACAGCCAACCACCTTTCGATCTCACGTCGACTGCCTAGCTCATCACGTCCTGAACTGTCGTGTACCAGTTTTGTTCGTGTGGTTCTTCATCTATTGGTCGGGGATCGTCTGCAGCGTCTTCATCCGCCAACCACCAACTCCATCAGGTCTTCATCCGCTACCTGTTAAGCAACCGTCGTCAGGTGCCTACTGTGAACCTGAGTCGAACCCAAGCTGA

Protein sequence

MQHPHHLLSPSPFSRNLPSSNLPSSLLLSIFRSILQPTTFRSHVDCLAHHVLNCRVPVLFVWFFIYWSGIVCSVFIRQPPTPSGLHPLPVKQPSSGAYCEPESNPS*

Homology

[Close]

BLAST of CsGy7G008735.1 vs. NCBI nr
Match: KGN44083.1 (hypothetical protein Csa_015922 [Cucumis sativus])

HSP 1 Score: 224 bits (572), Expect = 3.99e-74
Identity = 105/106 (99.06%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 1   MQHPHHLLSPSPFSRNLPSSNLPSSLLLSIFRSILQPTTFRSHVDCLAHHVLNCRVPVLF 60
           MQHPHHL+SPSPFSRNLPSSNLPSSLLLSIFRSILQPTTFRSHVDCLAHHVLNCRVPVLF
Sbjct: 1   MQHPHHLVSPSPFSRNLPSSNLPSSLLLSIFRSILQPTTFRSHVDCLAHHVLNCRVPVLF 60

Query: 61  VWFFIYWSGIVCSVFIRQPPTPSGLHPLPVKQPSSGAYCEPESNPS 106
           VWFFIYWSGIVCSVFIRQPPTPSGLHPLPVKQPSSGAYCEPESNPS
Sbjct: 61  VWFFIYWSGIVCSVFIRQPPTPSGLHPLPVKQPSSGAYCEPESNPS 106

[Close]

BLAST of CsGy7G008735.1 vs. ExPASy TrEMBL
Match: A0A0A0K3K8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G176620 PE=4 SV=1)

HSP 1 Score: 224 bits (572), Expect = 1.93e-74
Identity = 105/106 (99.06%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 1   MQHPHHLLSPSPFSRNLPSSNLPSSLLLSIFRSILQPTTFRSHVDCLAHHVLNCRVPVLF 60
           MQHPHHL+SPSPFSRNLPSSNLPSSLLLSIFRSILQPTTFRSHVDCLAHHVLNCRVPVLF
Sbjct: 1   MQHPHHLVSPSPFSRNLPSSNLPSSLLLSIFRSILQPTTFRSHVDCLAHHVLNCRVPVLF 60

Query: 61  VWFFIYWSGIVCSVFIRQPPTPSGLHPLPVKQPSSGAYCEPESNPS 106
           VWFFIYWSGIVCSVFIRQPPTPSGLHPLPVKQPSSGAYCEPESNPS
Sbjct: 61  VWFFIYWSGIVCSVFIRQPPTPSGLHPLPVKQPSSGAYCEPESNPS 106

The following BLAST results are available for this feature:

BLAST of CsGy7G008735.1 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy7G008735.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN44083.1	3.99e-74	99.06	hypothetical protein Csa_015922 [Cucumis sativus]	[more]

BLAST of CsGy7G008735.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K3K8	1.93e-74	99.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G176620 PE=4 SV=1	[more]

BLAST of CsGy7G008735.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..106

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy7G008735	CsGy7G008735	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy7G008735.1.exon1	CsGy7G008735.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.CsGy7G008735.1	cds.CsGy7G008735.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy7G008735.1	CsGy7G008735.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane