CsGy6G020760.1 (mRNA) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTATATATAGTCCCATATCTCTAGTCGAAGAGGGTATCGAATCTCGGATACGGTTGAGAGACAACAGATCAATCATGGTTAGGATTTGGGAAGACAAGATGATAGAAGGGAAATTGAAGAAAGGCAAGAATTTGGGAAGTCAGGTTGTGAAGTATGGAAAAAAGTGGTGGAGGTTGTGCTGGGGTGTAGTGAAAGAAGGTGCAAAAGCAATTCCTAAAGATGTACCAAAGGGTCATTTTGTAGTGTATGTGGGTGAAGATTGGAAGAGATATGTTATTGAGATTGGAGTGTTGAGACATCCTTTGTTTAAGATATTACTTGATTCTGCTGAGGAAACGTTTGGATTTGATAATGGGAATTCAAAACTATACTTACCTTGTCAGGAGTGTGTTTTTGTTACAATTCTTCAATGTGTACATTCTTCTACCCCTTCTTTGGAACTTGTATTTTGA ATGTGTATATATAGTCCCATATCTCTAGTCGAAGAGGGTATCGAATCTCGGATACGGTTGAGAGACAACAGATCAATCATGGTTAGGATTTGGGAAGACAAGATGATAGAAGGGAAATTGAAGAAAGGCAAGAATTTGGGAAGTCAGGTTGTGAAGTATGGAAAAAAGTGGTGGAGGTTGTGCTGGGGTGTAGTGAAAGAAGGTGCAAAAGCAATTCCTAAAGATGTACCAAAGGGTCATTTTGTAGTGTATGTGGGTGAAGATTGGAAGAGATATGTTATTGAGATTGGAGTGTTGAGACATCCTTTGTTTAAGATATTACTTGATTCTGCTGAGGAAACGTTTGGATTTGATAATGGGAATTCAAAACTATACTTACCTTGTCAGGAGTGTGTTTTTGTTACAATTCTTCAATGTGTACATTCTTCTACCCCTTCTTTGGAACTTGTATTTTGA ATGTGTATATATAGTCCCATATCTCTAGTCGAAGAGGGTATCGAATCTCGGATACGGTTGAGAGACAACAGATCAATCATGGTTAGGATTTGGGAAGACAAGATGATAGAAGGGAAATTGAAGAAAGGCAAGAATTTGGGAAGTCAGGTTGTGAAGTATGGAAAAAAGTGGTGGAGGTTGTGCTGGGGTGTAGTGAAAGAAGGTGCAAAAGCAATTCCTAAAGATGTACCAAAGGGTCATTTTGTAGTGTATGTGGGTGAAGATTGGAAGAGATATGTTATTGAGATTGGAGTGTTGAGACATCCTTTGTTTAAGATATTACTTGATTCTGCTGAGGAAACGTTTGGATTTGATAATGGGAATTCAAAACTATACTTACCTTGTCAGGAGTGTGTTTTTGTTACAATTCTTCAATGTGTACATTCTTCTACCCCTTCTTTGGAACTTGTATTTTGA MCIYSPISLVEEGIESRIRLRDNRSIMVRIWEDKMIEGKLKKGKNLGSQVVKYGKKWWRLCWGVVKEGAKAIPKDVPKGHFVVYVGEDWKRYVIEIGVLRHPLFKILLDSAEETFGFDNGNSKLYLPCQECVFVTILQCVHSSTPSLELVF* Homology
BLAST of CsGy6G020760.1 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 9.0e-14 Identity = 36/69 (52.17%), Postives = 46/69 (66.67%), Query Frame = 0
BLAST of CsGy6G020760.1 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 4.5e-13 Identity = 34/69 (49.28%), Postives = 45/69 (65.22%), Query Frame = 0
BLAST of CsGy6G020760.1 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 5.0e-12 Identity = 34/77 (44.16%), Postives = 47/77 (61.04%), Query Frame = 0
BLAST of CsGy6G020760.1 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 6.5e-12 Identity = 32/66 (48.48%), Postives = 42/66 (63.64%), Query Frame = 0
BLAST of CsGy6G020760.1 vs. ExPASy Swiss-Prot
Match: P33082 (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.5e-11 Identity = 32/77 (41.56%), Postives = 47/77 (61.04%), Query Frame = 0
BLAST of CsGy6G020760.1 vs. NCBI nr
Match: KAA0036482.1 (auxin-induced protein X15-like [Cucumis melo var. makuwa] >TYK00007.1 auxin-induced protein X15-like [Cucumis melo var. makuwa]) HSP 1 Score: 272 bits (695), Expect = 2.50e-91 Identity = 132/143 (92.31%), Postives = 135/143 (94.41%), Query Frame = 0
BLAST of CsGy6G020760.1 vs. NCBI nr
Match: XP_004149915.1 (auxin-induced protein 15A [Cucumis sativus]) HSP 1 Score: 267 bits (683), Expect = 5.52e-90 Identity = 124/125 (99.20%), Postives = 125/125 (100.00%), Query Frame = 0
BLAST of CsGy6G020760.1 vs. NCBI nr
Match: KGN48091.2 (hypothetical protein Csa_004000 [Cucumis sativus]) HSP 1 Score: 264 bits (674), Expect = 4.54e-88 Identity = 122/123 (99.19%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of CsGy6G020760.1 vs. NCBI nr
Match: XP_022959679.1 (auxin-induced protein 15A-like [Cucurbita moschata] >KAG6602309.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 129 bits (325), Expect = 1.27e-35 Identity = 65/105 (61.90%), Postives = 79/105 (75.24%), Query Frame = 0
BLAST of CsGy6G020760.1 vs. NCBI nr
Match: XP_022134179.1 (indole-3-acetic acid-induced protein ARG7-like [Momordica charantia]) HSP 1 Score: 128 bits (322), Expect = 7.64e-35 Identity = 68/124 (54.84%), Postives = 85/124 (68.55%), Query Frame = 0
BLAST of CsGy6G020760.1 vs. ExPASy TrEMBL
Match: A0A5D3BLH1 (Auxin-induced protein X15-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00520 PE=3 SV=1) HSP 1 Score: 272 bits (695), Expect = 1.21e-91 Identity = 132/143 (92.31%), Postives = 135/143 (94.41%), Query Frame = 0
BLAST of CsGy6G020760.1 vs. ExPASy TrEMBL
Match: A0A0A0KJ86 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G405980 PE=3 SV=1) HSP 1 Score: 267 bits (683), Expect = 2.67e-90 Identity = 124/125 (99.20%), Postives = 125/125 (100.00%), Query Frame = 0
BLAST of CsGy6G020760.1 vs. ExPASy TrEMBL
Match: A0A6J1H8T2 (auxin-induced protein 15A-like OS=Cucurbita moschata OX=3662 GN=LOC111460683 PE=3 SV=1) HSP 1 Score: 129 bits (325), Expect = 6.14e-36 Identity = 65/105 (61.90%), Postives = 79/105 (75.24%), Query Frame = 0
BLAST of CsGy6G020760.1 vs. ExPASy TrEMBL
Match: A0A6J1BY27 (indole-3-acetic acid-induced protein ARG7-like OS=Momordica charantia OX=3673 GN=LOC111006505 PE=3 SV=1) HSP 1 Score: 128 bits (322), Expect = 3.70e-35 Identity = 68/124 (54.84%), Postives = 85/124 (68.55%), Query Frame = 0
BLAST of CsGy6G020760.1 vs. ExPASy TrEMBL
Match: A0A3Q0EUW4 (uncharacterized protein LOC106757509 OS=Vigna radiata var. radiata OX=3916 GN=LOC106757509 PE=3 SV=1) HSP 1 Score: 112 bits (280), Expect = 2.99e-28 Identity = 61/143 (42.66%), Postives = 84/143 (58.74%), Query Frame = 0
BLAST of CsGy6G020760.1 vs. TAIR 10
Match: AT2G37030.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 105.1 bits (261), Expect = 4.9e-23 Identity = 50/112 (44.64%), Postives = 77/112 (68.75%), Query Frame = 0
BLAST of CsGy6G020760.1 vs. TAIR 10
Match: AT3G53250.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 93.2 bits (230), Expect = 1.9e-19 Identity = 39/81 (48.15%), Postives = 61/81 (75.31%), Query Frame = 0
BLAST of CsGy6G020760.1 vs. TAIR 10
Match: AT4G38860.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 80.1 bits (196), Expect = 1.7e-15 Identity = 35/71 (49.30%), Postives = 46/71 (64.79%), Query Frame = 0
BLAST of CsGy6G020760.1 vs. TAIR 10
Match: AT4G34760.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 78.2 bits (191), Expect = 6.4e-15 Identity = 36/69 (52.17%), Postives = 46/69 (66.67%), Query Frame = 0
BLAST of CsGy6G020760.1 vs. TAIR 10
Match: AT2G21220.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 77.4 bits (189), Expect = 1.1e-14 Identity = 36/69 (52.17%), Postives = 45/69 (65.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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