CsGy6G013460.2 (mRNA) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTATCAAACACAATACTTTCAGTTTAATACGTTTCTGTCAAACTATACAAAGCCCTAATTGCTGTAACCCTAATGACTTGTCAAAGCTACCACCAACACCATAATCTACTAACTTCTTCTTCTTCTTCTTCCCTCGACCCGCTAAGCATTTCCAGAAACTCAATATCATCGTTTCGTTTACCTTCTTGGCCTTTTGGATGAAGACGCGGTTAATCTGATTTCCTCCCATTTTGTTGGAAATTGGGTTGGTTTATGACCCCAATCCCAACTCATCGTTGTTAATGCTTAGTTGAATTCTAGGTTTTTTTTTAAAAAAAAATTCTGCGGATTTTGAACTTGGGTTTCGTATTTCAATGGCTACCGAGGCGACCGAAGCCACGACTAAGTTCCAAAGTCCGGATTTTCGTCCGGTACCGTCGCCTCCAGATTTCCATCCCGAGATTGTGGTATCAGCTCATGATGGTCTTCGGTTCTGGCAGTTCATGATTGCCGGTTCAATCGCTGGTTCTGCTGAACATATGGCTATGTTCCCCATTGATACCGTCAAGACCCATATGCAAGCACTTGGCTCTTGTCCAATTAAATCTGTTGGAGTTCGACAAGCCCTTCGGTCAATTTTGAAGTCAGAGGGACCTGCTGGGTTTTATCGTGGTATTGGTGCTATGGGTCTTGGAGCTGGACCAGCACATGCTGTGTATTTTACAGTTTACGAGAATTGTAAGAAGTTTTTCTCTGGTGGGGATCCTAATAATTCTCTTGCTCATGCTGCTTCTGGGGTCTGTGCAACGGTGGCGAGTGATGCTGTGTTTACACCGATGGATATGGTTAAACAGCGGCTGCAGTTGAGTAATAATCCCTACAAGGGAGTTTTGGATTGTATCAAAAAGGTTCTTAGAGATGAGGGGTTTAAAGCATTTTATGCATCATACAGAACTACCGTGTTGATGAATGCACCATTTACTGCTGTGCATTTTGCTACTTATGAAGCTGCAAAGAGAGGTTTGATGGAGGTTTCGCCAGAAAGTGTAAATGATGAACAGTGGGTTGTTCATGCGACGGCTGGAGCTGTTGCTGGAGCTTCAGCTGCGTTTGTTACAACGCCGCTTGATGTGGTTAAGACTCAATTACAATGCCAGGTACCCCATTTAATGATTTGGTTGTAGCTTCTGCTAATTTTGCGAGAAGATTTTAAGAGTAGGAGATAAAGTGTTTCTAGAGCAAGATTAAGGTCATGGGACTTCCGCACTAAAAATATTTTAAATTTGAATGCACTTGTTGAGCCAAGGTTCTTTTTTGGTCGAGTGATTAGTAAAAAAGCGAAAAGTGCTAGAACCTGGCATCAAACTGTTCTAAGGGGCAGCCTCATTGGCCAAGGTTTTGTAGTCTCTTGAGTCTTGAGTTACAACTACCCAGCGGTTGCATATTCGAATCCTCGAGTGAGCTGAGTAAGGAAAACCTTTGATGTCTCTAATGGACAGACCTTAAGCTAGGTGTTGACGAAAACGGAAAGTGCTTGAAATTAGAAAACTTTGCTCTTATTTTCGAAGCTTTGTGGAAAGTATATTTTAATCATTTTTTTTTGCGGGATTTTTCGAGTGTTCGGGCATTTTTGTGTGCACCTTGACTTTTCTCATGTGGCGACCTTATTATAGTTGGTTGAAAAGTAACTTGCATAGAACCTGGGTAGGTGGCCATATTCCCTCTAAGTTCTCTCTGCATGTCTTGTATTTAACACTAGACCAATCTATAAACATTTTGTTAAACAACTTATCAAGGGAACAAATCCTCATTGTGCCCCTTCCAAATCCTCACCCTACTAATTATCCAAGAAACTCACCCCAACTATCTTTTTGTGACCCCAACCTTACAACTTATGAAAGGGATGGAGGAAAAAAATTAATGAGAAATGGTATAAAATTTGAAGTTATAATTTGGTTGAGAGAATGGTGGGAGTTAGTCTGGAGTAGAGGATCAAGATACAAGAATTTATGATACAGAACAAGAGGGAAAAATATGCGTGCTTTGAAACTTATTGCAATGATCTTGCCCCCACCTGGGACCCCAAAAGGGGTGGAAAAATGCAAGAAAAAAGTTTATCAAAAAGAAGTTCAAGTTATATTTGCAAACATGGTTTGAAAGAAATATCGTTGAAGGTCCAATGTTAAATTGAGGTTCAATTCTTGATGACAATGAAAAAAAAAAAACTCTCGATGACAATGAATGGGGGAGGAAAATATGCCAAACCATTTTTCGTTTCTTTCCCCGTAGTTTTCCTTTTGGTCAAATAATAGTTATTTGGACATTAAATAATTCTAGAAAAGAAACATTAAAGATCTGGAATTGTCCATGCTTGTATGAACTAAACATATATCTTTCTCATTCCATAAAAAAGGTGATGCACGAAAAGTGGGAGATTACAGACCTATCAGCTTGATTCCATGTCTTTACAAAATCATTGCAAGAGTCCTTTCAGATAGATTCAAAAAAATTCTCCCACCCACCATTACCAAATATCAATCAACGTTTATTGTTGACCGACAAACTCTAGATGCATCACTGATTGCCAATGATCTCTGAATATGCCAAACAAAGGAAACAAGGAATTGTGATAAAACTTGATATAGAAAAGACCTAAAAATCAAGGGCTTCGGGAAACTTTAGAGAAAATGGATAAAAGGTTCCACTGCAAACTCCTCGATCATCAGCAATGGCCAACCAAGGAATGAAATCAAAGCTACAAGAGATCTTACACGAGGAGATCCTCTCTCACCATTCCTCTTTGTCATTATTATGGACTGTTTTAGTAGAATGATGACTGAAGCACATGCTCATGACTGTAACAAAGCTTTCTGTGTTGGAAAAACTCACTACCAATCCATCATCTCCTCTTTGTGGATGACACCATCCTCTTTACAGAAAATGATTCAAAACTTGATCAAAGTCTATTTGGGCTTGTTAAGAAAATCTTTGAGGATGCATCAGGTTAAACATTAATCACCAAAAATCAGAATTGATGGGTATCGACATTAACTGAGGCAGATGTTAGATCAGTAGCTACTTTCTATGGCTGTAAGGTTGGTCAATGGCTGGGCTCATATTTGGGTCTTCCTCTATTTGACAAATCCGGTATAATCTCTTTTTTGGAATCCTATAATTGAGAAAATTGAGAAAAGATTACCACTCATGGAACCACTGGTCCACTCCAACATCTTCAAGGGTTGCCAACTTACTCTCCTCCAAGTCACTTTTCCTAGCCTTCCCACATATTACCTATCACTTCACAAAATACCATCTAAGGTGATTTCTACAATTGAAAAATTATACAGGTCATTTCTGTGGAAAGGTGGCTCTCACAACGTCAAATGGGATACTTAAACCCTGCTCATATTTTGGATTCAATGGGACCATGTTTGCTTAGCTCATTCTCTTAGGAACTTTCCGTTTCTCTTTTATTGAGTAGTGGACTCTTTTTATTGTCTCCTGTCTCCTTGGTTTTCTCTTGGATAGGAACAACCCCTACATATGTGACTTCTTTTCATAACAGATACATGCTTCTTGCACACAAAACAAAATATTATTGTTTTCCTTCTTTACCTTCAAACGTTATGGAAGTATCTGTTTAATTGGTTAGTCATGGAAAACTCGAAAACTGTTAATATAATAAAGTCTGCTACAGAGAAATGTCAATTGAATGGCGAATAGCAATATAGTTCTTTTAGTACCACCATAGAAAAGTTAAGATGCATCAACGTTACATGAACATATCCTTTATCAACTGAAGTTTTGATTATCTCAAACAAATGAATGTAATGAAGATTTTATGTTAACTTATGTGCTGCTTCCCCTAGATCCATAGCCGAATGTATAAGTGGAAACCTAACCTTAATTTTCACATTTATGGATGATCCACAGGGTGTATGTGGATGCGACAGATTCAAAAGTGGGTCAATCAGGGATGTAATTCGAACAATACTCAAGAAGGATGGATACAGAGGGCTTATGAGGGGATGGGTTCCAAGGATGCTCTTTCATGCCCCAGCTGCAGCTATTTGCTGGTCGACATATGAAGCGTTAAAATCCTTCTTCCACGATCTCAATGGTGGCAGCAGCCACAACGGTACCTGAAAATAGGAAGTAGAGAGGAGGAGAGGGAATATTCTTTTCTTTTTTGCATTGTCCCTCTTTCCTGCAGTTGAAACAAAGACAGCTTTCTTTTTGGGGCTGCAGAGAATTTTGGTAGGAGGGATTGTCTCAAAAAAAAAGAAAAATGCAAATGCTACCACTTGAAGTCAAAGGAGTACACACACCAAAGTTAATTATAATTTGTATTCTACACGTTGGTAATGGGTTTCTAATAATGGCAATATATGAAATTTTGATCTGTTTCTCTTTACTTTGTTTTTATGGTTCTGTTGGCATTAGAACAATAGAACTGTTTTGTTTTAGAGTCAGCCTCGTGC ATTATCAAACACAATACTTTCAGTTTAATACGTTTCTGTCAAACTATACAAAGCCCTAATTGCTGTAACCCTAATGACTTGTCAAAGCTACCACCAACACCATAATCTACTAACTTCTTCTTCTTCTTCTTCCCTCGACCCGCTAAGCATTTCCAGAAACTCAATATCATCGTTTCGTTTACCTTCTTGGCCTTTTGGATGAAGACGCGGTTAATCTGATTTCCTCCCATTTTGTTGGAAATTGGGTTGGTTTATGACCCCAATCCCAACTCATCGTTGTTAATGCTTAGTTGAATTCTAGGTTTTTTTTTAAAAAAAAATTCTGCGGATTTTGAACTTGGGTTTCGTATTTCAATGGCTACCGAGGCGACCGAAGCCACGACTAAGTTCCAAAGTCCGGATTTTCGTCCGGTACCGTCGCCTCCAGATTTCCATCCCGAGATTGTGGTATCAGCTCATGATGGTCTTCGGTTCTGGCAGTTCATGATTGCCGGTTCAATCGCTGGTTCTGCTGAACATATGGCTATGTTCCCCATTGATACCGTCAAGACCCATATGCAAGCACTTGGCTCTTGTCCAATTAAATCTGTTGGAGTTCGACAAGCCCTTCGGTCAATTTTGAAGTCAGAGGGACCTGCTGGGTTTTATCGTGGTATTGGTGCTATGGGTCTTGGAGCTGGACCAGCACATGCTGTGTATTTTACAGTTTACGAGAATTGTAAGAAGTTTTTCTCTGGTGGGGATCCTAATAATTCTCTTGCTCATGCTGCTTCTGGGGTCTGTGCAACGGTGGCGAGTGATGCTGTGTTTACACCGATGGATATGGTTAAACAGCGGCTGCAGTTGAGTAATAATCCCTACAAGGGAGTTTTGGATTGTATCAAAAAGGTTCTTAGAGATGAGGGGTTTAAAGCATTTTATGCATCATACAGAACTACCGTGTTGATGAATGCACCATTTACTGCTGTGCATTTTGCTACTTATGAAGCTGCAAAGAGAGGTTTGATGGAGGTTTCGCCAGAAAGTGTAAATGATGAACAGTGGGTTGTTCATGCGACGGCTGGAGCTGTTGCTGGAGCTTCAGCTGCGTTTGTTACAACGCCGCTTGATGTGGTTAAGACTCAATTACAATGCCAGGGTGTATGTGGATGCGACAGATTCAAAAGTGGGTCAATCAGGGATGTAATTCGAACAATACTCAAGAAGGATGGATACAGAGGGCTTATGAGGGGATGGGTTCCAAGGATGCTCTTTCATGCCCCAGCTGCAGCTATTTGCTGGTCGACATATGAAGCGTTAAAATCCTTCTTCCACGATCTCAATGGTGGCAGCAGCCACAACGGTACCTGAAAATAGGAAGTAGAGAGGAGGAGAGGGAATATTCTTTTCTTTTTTGCATTGTCCCTCTTTCCTGCAGTTGAAACAAAGACAGCTTTCTTTTTGGGGCTGCAGAGAATTTTGGTAGGAGGGATTGTCTCAAAAAAAAAGAAAAATGCAAATGCTACCACTTGAAGTCAAAGGAGTACACACACCAAAGTTAATTATAATTTGTATTCTACACGTTGGTAATGGGTTTCTAATAATGGCAATATATGAAATTTTGATCTGTTTCTCTTTACTTTGTTTTTATGGTTCTGTTGGCATTAGAACAATAGAACTGTTTTGTTTTAGAGTCAGCCTCGTGC ATGGCTACCGAGGCGACCGAAGCCACGACTAAGTTCCAAAGTCCGGATTTTCGTCCGGTACCGTCGCCTCCAGATTTCCATCCCGAGATTGTGGTATCAGCTCATGATGGTCTTCGGTTCTGGCAGTTCATGATTGCCGGTTCAATCGCTGGTTCTGCTGAACATATGGCTATGTTCCCCATTGATACCGTCAAGACCCATATGCAAGCACTTGGCTCTTGTCCAATTAAATCTGTTGGAGTTCGACAAGCCCTTCGGTCAATTTTGAAGTCAGAGGGACCTGCTGGGTTTTATCGTGGTATTGGTGCTATGGGTCTTGGAGCTGGACCAGCACATGCTGTGTATTTTACAGTTTACGAGAATTGTAAGAAGTTTTTCTCTGGTGGGGATCCTAATAATTCTCTTGCTCATGCTGCTTCTGGGGTCTGTGCAACGGTGGCGAGTGATGCTGTGTTTACACCGATGGATATGGTTAAACAGCGGCTGCAGTTGAGTAATAATCCCTACAAGGGAGTTTTGGATTGTATCAAAAAGGTTCTTAGAGATGAGGGGTTTAAAGCATTTTATGCATCATACAGAACTACCGTGTTGATGAATGCACCATTTACTGCTGTGCATTTTGCTACTTATGAAGCTGCAAAGAGAGGTTTGATGGAGGTTTCGCCAGAAAGTGTAAATGATGAACAGTGGGTTGTTCATGCGACGGCTGGAGCTGTTGCTGGAGCTTCAGCTGCGTTTGTTACAACGCCGCTTGATGTGGTTAAGACTCAATTACAATGCCAGGGTGTATGTGGATGCGACAGATTCAAAAGTGGGTCAATCAGGGATGTAATTCGAACAATACTCAAGAAGGATGGATACAGAGGGCTTATGAGGGGATGGGTTCCAAGGATGCTCTTTCATGCCCCAGCTGCAGCTATTTGCTGGTCGACATATGAAGCGTTAAAATCCTTCTTCCACGATCTCAATGGTGGCAGCAGCCACAACGGTACCTGA MATEATEATTKFQSPDFRPVPSPPDFHPEIVVSAHDGLRFWQFMIAGSIAGSAEHMAMFPIDTVKTHMQALGSCPIKSVGVRQALRSILKSEGPAGFYRGIGAMGLGAGPAHAVYFTVYENCKKFFSGGDPNNSLAHAASGVCATVASDAVFTPMDMVKQRLQLSNNPYKGVLDCIKKVLRDEGFKAFYASYRTTVLMNAPFTAVHFATYEAAKRGLMEVSPESVNDEQWVVHATAGAVAGASAAFVTTPLDVVKTQLQCQGVCGCDRFKSGSIRDVIRTILKKDGYRGLMRGWVPRMLFHAPAAAICWSTYEALKSFFHDLNGGSSHNGT* Homology
BLAST of CsGy6G013460.2 vs. ExPASy Swiss-Prot
Match: Q620A6 (Mitoferrin OS=Caenorhabditis briggsae OX=6238 GN=mfn-1 PE=3 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 2.7e-55 Identity = 126/296 (42.57%), Postives = 166/296 (56.08%), Query Frame = 0
BLAST of CsGy6G013460.2 vs. ExPASy Swiss-Prot
Match: Q55DY8 (Mitoferrin OS=Dictyostelium discoideum OX=44689 GN=mcfF PE=3 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 4.6e-55 Identity = 118/294 (40.14%), Postives = 176/294 (59.86%), Query Frame = 0
BLAST of CsGy6G013460.2 vs. ExPASy Swiss-Prot
Match: Q23125 (Mitoferrin OS=Caenorhabditis elegans OX=6239 GN=mfn-1 PE=2 SV=1) HSP 1 Score: 212.6 bits (540), Expect = 6.7e-54 Identity = 124/297 (41.75%), Postives = 167/297 (56.23%), Query Frame = 0
BLAST of CsGy6G013460.2 vs. ExPASy Swiss-Prot
Match: Q9VAY3 (Mitoferrin OS=Drosophila melanogaster OX=7227 GN=mfrn PE=2 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 8.8e-54 Identity = 119/286 (41.61%), Postives = 168/286 (58.74%), Query Frame = 0
BLAST of CsGy6G013460.2 vs. ExPASy Swiss-Prot
Match: P10566 (Mitochondrial RNA-splicing protein MRS3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MRS3 PE=1 SV=4) HSP 1 Score: 199.5 bits (506), Expect = 5.9e-50 Identity = 116/308 (37.66%), Postives = 169/308 (54.87%), Query Frame = 0
BLAST of CsGy6G013460.2 vs. NCBI nr
Match: XP_004143170.1 (mitoferrin [Cucumis sativus] >KGN47047.1 hypothetical protein Csa_020661 [Cucumis sativus]) HSP 1 Score: 676 bits (1744), Expect = 2.34e-245 Identity = 331/331 (100.00%), Postives = 331/331 (100.00%), Query Frame = 0
BLAST of CsGy6G013460.2 vs. NCBI nr
Match: XP_008463838.1 (PREDICTED: mitoferrin-like [Cucumis melo]) HSP 1 Score: 672 bits (1734), Expect = 2.69e-243 Identity = 329/331 (99.40%), Postives = 330/331 (99.70%), Query Frame = 0
BLAST of CsGy6G013460.2 vs. NCBI nr
Match: XP_038902774.1 (mitoferrin [Benincasa hispida]) HSP 1 Score: 638 bits (1645), Expect = 3.23e-230 Identity = 311/327 (95.11%), Postives = 317/327 (96.94%), Query Frame = 0
BLAST of CsGy6G013460.2 vs. NCBI nr
Match: XP_022148452.1 (mitoferrin [Momordica charantia]) HSP 1 Score: 629 bits (1623), Expect = 6.28e-227 Identity = 301/326 (92.33%), Postives = 316/326 (96.93%), Query Frame = 0
BLAST of CsGy6G013460.2 vs. NCBI nr
Match: KAG6605395.1 (Mitoferrin, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 627 bits (1617), Expect = 5.35e-226 Identity = 303/331 (91.54%), Postives = 313/331 (94.56%), Query Frame = 0
BLAST of CsGy6G013460.2 vs. ExPASy TrEMBL
Match: A0A0A0KF81 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G181520 PE=3 SV=1) HSP 1 Score: 676 bits (1744), Expect = 1.13e-245 Identity = 331/331 (100.00%), Postives = 331/331 (100.00%), Query Frame = 0
BLAST of CsGy6G013460.2 vs. ExPASy TrEMBL
Match: A0A1S3CK52 (mitoferrin-like OS=Cucumis melo OX=3656 GN=LOC103501881 PE=3 SV=1) HSP 1 Score: 672 bits (1734), Expect = 1.30e-243 Identity = 329/331 (99.40%), Postives = 330/331 (99.70%), Query Frame = 0
BLAST of CsGy6G013460.2 vs. ExPASy TrEMBL
Match: A0A6J1D537 (mitoferrin OS=Momordica charantia OX=3673 GN=LOC111017091 PE=3 SV=1) HSP 1 Score: 629 bits (1623), Expect = 3.04e-227 Identity = 301/326 (92.33%), Postives = 316/326 (96.93%), Query Frame = 0
BLAST of CsGy6G013460.2 vs. ExPASy TrEMBL
Match: A0A6J1JHV3 (mitoferrin OS=Cucurbita maxima OX=3661 GN=LOC111484495 PE=3 SV=1) HSP 1 Score: 625 bits (1611), Expect = 2.05e-225 Identity = 300/326 (92.02%), Postives = 316/326 (96.93%), Query Frame = 0
BLAST of CsGy6G013460.2 vs. ExPASy TrEMBL
Match: A0A6J1FTL2 (mitoferrin-like OS=Cucurbita moschata OX=3662 GN=LOC111448348 PE=3 SV=1) HSP 1 Score: 625 bits (1611), Expect = 2.05e-225 Identity = 300/326 (92.02%), Postives = 316/326 (96.93%), Query Frame = 0
BLAST of CsGy6G013460.2 vs. TAIR 10
Match: AT2G30160.1 (Mitochondrial substrate carrier family protein ) HSP 1 Score: 509.2 bits (1310), Expect = 2.5e-144 Identity = 245/325 (75.38%), Postives = 274/325 (84.31%), Query Frame = 0
BLAST of CsGy6G013460.2 vs. TAIR 10
Match: AT1G07030.1 (Mitochondrial substrate carrier family protein ) HSP 1 Score: 501.5 bits (1290), Expect = 5.1e-142 Identity = 244/328 (74.39%), Postives = 274/328 (83.54%), Query Frame = 0
BLAST of CsGy6G013460.2 vs. TAIR 10
Match: AT4G11440.1 (Mitochondrial substrate carrier family protein ) HSP 1 Score: 146.4 bits (368), Expect = 4.2e-35 Identity = 91/277 (32.85%), Postives = 153/277 (55.23%), Query Frame = 0
BLAST of CsGy6G013460.2 vs. TAIR 10
Match: AT1G74240.1 (Mitochondrial substrate carrier family protein ) HSP 1 Score: 145.2 bits (365), Expect = 9.3e-35 Identity = 99/360 (27.50%), Postives = 167/360 (46.39%), Query Frame = 0
BLAST of CsGy6G013460.2 vs. TAIR 10
Match: AT1G34065.1 (S-adenosylmethionine carrier 2 ) HSP 1 Score: 139.4 bits (350), Expect = 5.1e-33 Identity = 93/291 (31.96%), Postives = 145/291 (49.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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