CsGy6G000200.2 (mRNA) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAATTTCACAGATTCAGTTTAACTTCTGGATCTTTTGCTCTAATGCTCTCTGCGCTTTGGTGTTGAACTTCTCTATTTTCTTGGCAATTGGAAGAACTGGCACCGTTACCATTCGAGTTGGTGGTGTTCTTCAGGATTGTGTTCTTGTAGCCTTTTCAACTGTTCTATTTCATTAGTTTTAGAATATACAGTTGGTAACTTCATTCTCTGTTGATAATTTGAGCATTTTTTTACAAGCCTTTTGATTTGCAAAAGTTCATTCAGCTAACTTATTCCTCTGTCTCTGACTTCTGATGCAGCACTCTGCGGTGTAATTGCTAAAAGATGAAGGATGTTCACGTATCTCATTCTCCACTTTCTACTGACAACATTCCCAAAATAACTTGTAAAGGTTAGTGTCCATTTGCTTTTGCACGGTACTTTAGACTGAGTATATGATATATCATATGGTTCAAGTAGCAATAATTATGATCGGAGTTTAGTCTCATATAGTATCAGGGTAAGACATATTTCTCTCTTCTACACAGACAGAACAATTTCTTTCTAACTAGCAACCATAAAATTCAGACAATACCTATTCTTGCACTATCCTGCAGATGAACGAAAGGCATTGAGAACAAGAAGTCTTTATAAGGTATTTCCTTACTACTATTAGTGTTTGATAATCAAAAGATAGCCCTAAAGCCAACCTAACCGATTACAGAGAGTTGGTTCTCTCCCTCCTCTCGCTCCTTTTCTATTACCAAAAAAACCAATTTCTGCCAATCGCAACCTTTTATTATATATAGTGGTTCTTATCTCCATTCTAACCAACTTTCACTCTGGACTACCCTTTTTACCTTTCCTAGAATATTTCAGCAATATCGGTGGCCTAACAGTCTGATACTAATTATAGAAGAAATTTTGAACTACAAC ATGGAAATTTCACAGATTCAGTTTAACTTCTGGATCTTTTGCTCTAATGCTCTCTGCGCTTTGGTGTTGAACTTCTCTATTTTCTTGGCAATTGGAAGAACTGGCACCGTTACCATTCGAGTTGGTGGTGTTCTTCAGGATTGTGTTCTTGTAGCCTTTTCAACTGTTCTATTTCATTAGTTTTAGAATATACAGTTGGTAACTTCATTCTCTGTTGATAATTTGAGCATTTTTTTACAAGCCTTTTGATTTGCAAAAGTTCATTCAGCTAACTTATTCCTCTGTCTCTGACTTCTGATGCAGCACTCTGCGGTGTAATTGCTAAAAGATGAAGGATGTTCACGTATCTCATTCTCCACTTTCTACTGACAACATTCCCAAAATAACTTGTAAAGATGAACGAAAGGCATTGAGAACAAGAAGTCTTTATAAGGTATTTCCTTACTACTATTAGTGTTTGATAATCAAAAGATAGCCCTAAAGCCAACCTAACCGATTACAGAGAGTTGGTTCTCTCCCTCCTCTCGCTCCTTTTCTATTACCAAAAAAACCAATTTCTGCCAATCGCAACCTTTTATTATATATAGTGGTTCTTATCTCCATTCTAACCAACTTTCACTCTGGACTACCCTTTTTACCTTTCCTAGAATATTTCAGCAATATCGGTGGCCTAACAGTCTGATACTAATTATAGAAGAAATTTTGAACTACAAC ATGGAAATTTCACAGATTCAGTTTAACTTCTGGATCTTTTGCTCTAATGCTCTCTGCGCTTTGGTGTTGAACTTCTCTATTTTCTTGGCAATTGGAAGAACTGGCACCGTTACCATTCGAGTTGGTGGTGTTCTTCAGGATTGTGTTCTTGTAGCCTTTTCAACTGTTCTATTTCATTAG MEISQIQFNFWIFCSNALCALVLNFSIFLAIGRTGTVTIRVGGVLQDCVLVAFSTVLFH* Homology
BLAST of CsGy6G000200.2 vs. ExPASy Swiss-Prot
Match: Q9LRP2 (Probable sugar phosphate/phosphate translocator At3g17430 OS=Arabidopsis thaliana OX=3702 GN=At3g17430 PE=1 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 8.2e-19 Identity = 46/58 (79.31%), Postives = 51/58 (87.93%), Query Frame = 0
BLAST of CsGy6G000200.2 vs. ExPASy Swiss-Prot
Match: Q9LNH5 (Probable sugar phosphate/phosphate translocator At1g48230 OS=Arabidopsis thaliana OX=3702 GN=At1g48230 PE=2 SV=2) HSP 1 Score: 90.9 bits (224), Expect = 5.3e-18 Identity = 44/58 (75.86%), Postives = 51/58 (87.93%), Query Frame = 0
BLAST of CsGy6G000200.2 vs. ExPASy Swiss-Prot
Match: Q9SUV2 (Probable sugar phosphate/phosphate translocator At4g32390 OS=Arabidopsis thaliana OX=3702 GN=At4g32390 PE=3 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 5.5e-07 Identity = 24/53 (45.28%), Postives = 38/53 (71.70%), Query Frame = 0
BLAST of CsGy6G000200.2 vs. ExPASy Swiss-Prot
Match: Q9SKJ7 (Probable sugar phosphate/phosphate translocator At2g25520 OS=Arabidopsis thaliana OX=3702 GN=At2g25520 PE=1 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 1.2e-06 Identity = 23/53 (43.40%), Postives = 38/53 (71.70%), Query Frame = 0
BLAST of CsGy6G000200.2 vs. ExPASy Swiss-Prot
Match: Q3E6T0 (Probable sugar phosphate/phosphate translocator At5g25400 OS=Arabidopsis thaliana OX=3702 GN=At5g25400 PE=2 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 2.7e-06 Identity = 22/53 (41.51%), Postives = 37/53 (69.81%), Query Frame = 0
BLAST of CsGy6G000200.2 vs. NCBI nr
Match: KGN45623.1 (hypothetical protein Csa_005587 [Cucumis sativus]) HSP 1 Score: 117 bits (292), Expect = 7.53e-33 Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0
BLAST of CsGy6G000200.2 vs. NCBI nr
Match: GFZ04469.1 (nucleotide-sugar transporter family protein [Actinidia rufa]) HSP 1 Score: 92.0 bits (227), Expect = 1.03e-21 Identity = 46/58 (79.31%), Postives = 51/58 (87.93%), Query Frame = 0
BLAST of CsGy6G000200.2 vs. NCBI nr
Match: MCI03885.1 (putative sugar phosphate/phosphate translocator [Trifolium medium]) HSP 1 Score: 92.0 bits (227), Expect = 1.05e-21 Identity = 46/58 (79.31%), Postives = 51/58 (87.93%), Query Frame = 0
BLAST of CsGy6G000200.2 vs. NCBI nr
Match: RWR93124.1 (putative sugar phosphate/phosphate translocator [Cinnamomum micranthum f. kanehirae]) HSP 1 Score: 91.7 bits (226), Expect = 1.53e-21 Identity = 45/58 (77.59%), Postives = 51/58 (87.93%), Query Frame = 0
BLAST of CsGy6G000200.2 vs. NCBI nr
Match: TKY54321.1 (sugar phosphate/phosphate translocator [Spatholobus suberectus]) HSP 1 Score: 91.7 bits (226), Expect = 1.60e-21 Identity = 45/58 (77.59%), Postives = 51/58 (87.93%), Query Frame = 0
BLAST of CsGy6G000200.2 vs. ExPASy TrEMBL
Match: A0A0A0K822 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G000710 PE=4 SV=1) HSP 1 Score: 117 bits (292), Expect = 3.64e-33 Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0
BLAST of CsGy6G000200.2 vs. ExPASy TrEMBL
Match: A0A5K0UW45 (Uncharacterized protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS407 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.34e-22 Identity = 45/58 (77.59%), Postives = 51/58 (87.93%), Query Frame = 0
BLAST of CsGy6G000200.2 vs. ExPASy TrEMBL
Match: A0A7J0G0K1 (Nucleotide-sugar transporter family protein OS=Actinidia rufa OX=165716 GN=Acr_17g0000410 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 4.97e-22 Identity = 46/58 (79.31%), Postives = 51/58 (87.93%), Query Frame = 0
BLAST of CsGy6G000200.2 vs. ExPASy TrEMBL
Match: A0A392NZD4 (Putative sugar phosphate/phosphate translocator (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0024926 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 5.09e-22 Identity = 46/58 (79.31%), Postives = 51/58 (87.93%), Query Frame = 0
BLAST of CsGy6G000200.2 vs. ExPASy TrEMBL
Match: A0A3S3QZJ3 (Putative sugar phosphate/phosphate translocator OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_02235900 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 7.39e-22 Identity = 45/58 (77.59%), Postives = 51/58 (87.93%), Query Frame = 0
BLAST of CsGy6G000200.2 vs. TAIR 10
Match: AT3G17430.1 (Nucleotide-sugar transporter family protein ) HSP 1 Score: 93.6 bits (231), Expect = 5.8e-20 Identity = 46/58 (79.31%), Postives = 51/58 (87.93%), Query Frame = 0
BLAST of CsGy6G000200.2 vs. TAIR 10
Match: AT1G48230.1 (nodulin MtN21 /EamA-like transporter family protein ) HSP 1 Score: 90.9 bits (224), Expect = 3.8e-19 Identity = 44/58 (75.86%), Postives = 51/58 (87.93%), Query Frame = 0
BLAST of CsGy6G000200.2 vs. TAIR 10
Match: AT4G32390.1 (Nucleotide-sugar transporter family protein ) HSP 1 Score: 54.3 bits (129), Expect = 3.9e-08 Identity = 24/53 (45.28%), Postives = 38/53 (71.70%), Query Frame = 0
BLAST of CsGy6G000200.2 vs. TAIR 10
Match: AT2G25520.1 (Drug/metabolite transporter superfamily protein ) HSP 1 Score: 53.1 bits (126), Expect = 8.7e-08 Identity = 23/53 (43.40%), Postives = 38/53 (71.70%), Query Frame = 0
BLAST of CsGy6G000200.2 vs. TAIR 10
Match: AT5G25400.1 (Nucleotide-sugar transporter family protein ) HSP 1 Score: 52.0 bits (123), Expect = 1.9e-07 Identity = 22/53 (41.51%), Postives = 37/53 (69.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|