CsGy4G016580.2 (mRNA) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAATTAGGTAAAAAGCTCATCATTTGATACTTCCCCAAGAAAAAGAAGAAAAAGTATTAAAATAGTCAAATAAGAACAGCTAGTGTTTTGTGAATAAGACACATATTAAGCAAGTGGAGGAATTGGAATTGGAATTGGAATTGGGAGTTCGTATATGTATGCGAGGCAACAGGATTTGGCCTTCAAATTCCTATAAATTTGTTGCCATGCCTCATCAATCTTACAACTCAATCACACAAACAGAGAGAGAGAAACAGAGCAATTTTCAAAGAAACACAGAAAAACAGAGAGAAAATGGCGAAGCTGTTCATAAAACAAGCCAAGAATTATGCAGAAGGAAGACCCAGTTATCCATCCAAGTTGTTTGAATACATTGCTTCCACAACTCCCGCCCACGACCTCGTTTGGGACGTCGGCACCGGCACCGGCCAAGCTGCTCAATCTGTAACTTTTTCCCTTCCTATATACTATTACTTCATCTCGCAAGTTGCTCAATCTGTTTAATTTTACCCTTTTAAACACTTTTTTCCTACTATTAAAGTTGGTTTTTTGAATGATTAAAGCATTTTCTGACTTTGAAAGCTAAAGATTCTACCATCTACAGCTTGCAGCACACTACACCACCGTGATCGCCACTGACACGAGCCCAAAACAGCTTGAGTTTGCAACCAAACTTCCCAACGTTCACTACCACCACACCCCGTCGACAATGTCCATCGAGGAAGTCGAGAAAATGGTGGCACCACCGGGGTCTGTCGACTTAGTCACTGTGGCACAAGCCCTCCATTGGTTCAACCTCCCATCTTTCTACCAAAACGTACGATGGGTCTTGAAGAAACCTCACGGCGTGATTGCGGCCTGGTGCTACTCATTGCCCGAAGTCAATAATGGCATCGACACTGTCCTCCGCCGCATCTACAAAACAGATTTTGGGCCTTATTGGGAGGCGCCAAGGCGGTTGGTGGATGAAGAGTATAAAACGATTGAGTTCCCATTCGAGGCGGTGGATGGGGAGGAGCCGATAACGGAGTTTGCGGCAGAGAAGGAGATGGAGTTTGAGGAGTATTTGATATATTTAAGGTCTTGGTCATCATATCAAACAGCCAAAGATTTGGGAATAGAGCTTCTAAGTAATGAAGTGGTTGAAGAGCTTGAGAGCGCTTGGAATGAAGATGGGGTTAAGGGTAAAAAAGTGGCCAAATTCCCAATCCATTTGAAGATAGGAAGAGTGGGAAACAATAACTAAATCAAAAAAGAGATCTTGTGTGTGGAGTATGCTCAAACTCTATTGTTAAATCCTTTCCCATTTTCCACCAGAAAGCTATCAATGGGTCACAATGTTTTACAAAATAAACATATGCATCTATACATTGAAAACTAGGCTAAATTATATATATTGTCTGTGTTAAAAATATCTTCCAACTTTCAAAAAAAAAGTTTTAGTTTTGGATGGAAACAGAATTTTGTTTAAAAAGTGCTCTCAACTATTAAAAAATTTCACAAATACCATTTAATTTAAAATATGAAAAAAAAATACTAACACTAACCCAATTTTTACATCAAATTTCTTAGCACCCAAAATAAAATAAAAAATTAAGTTAAAATTAAACGATAGTTCTAAATTTCCATTAGTATATTGATATTTTCACAATTTGATGGATTCGATATCAATCGAATGGGTGAGTTGATATTTCCATTACTTTGTAGAGTACAAATCACAAATCACAACAAATAAACATTAAAATGACACTATTATAAAGTTACCTAGGTTATCATTAATTGAAATAGTCAGTTTTATATAGCAACAATGTTATAACGTAAAAGTGACTATTTCATTATTCCAGTCTTATGTATTATCCTCACTTTCATGTCTTCACGTGAATGATTTAGGATTAGATCGTTTGTACTAACTACAAAGCGAGCCATAACCGTAGTGTTCTCAGAATAAGATGCACAATCTTATTCATATACTATAGAGTGTTACGCTATATACTCGAACTTAACTTGATCCATGTTTATGTCTTTACATAAAGTTCAAGTTTACTTAAGATAGCCTCAGAACCTTAGTTAGGAATTTACACTTGGATATTTGTAAGTTGTTTTGAGGGGGGTATTTTGAGACTTGAGTAATTTGGGAGAGAGTTGGGTTGGGTGGATAAAAAACCCAATCCACTATTTTGTTCACCAATAATTTAAAAGATTTATTACCTTGCTATTCGCATCAACT GAAATTAGGTAAAAAGCTCATCATTTGATACTTCCCCAAGAAAAAGAAGAAAAAGTATTAAAATAGTCAAATAAGAACAGCTAGTGTTTTGTGAATAAGACACATATTAAGCAAGTGGAGGAATTGGAATTGGAATTGGAATTGGGAGTTCGTATATGTATGCGAGGCAACAGGATTTGGCCTTCAAATTCCTATAAATTTGTTGCCATGCCTCATCAATCTTACAACTCAATCACACAAACAGAGAGAGAGAAACAGAGCAATTTTCAAAGAAACACAGAAAAACAGAGAGAAAATGGCGAAGCTGTTCATAAAACAAGCCAAGAATTATGCAGAAGGAAGACCCAGTTATCCATCCAAGTTGTTTGAATACATTGCTTCCACAACTCCCGCCCACGACCTCGTTTGGGACGTCGGCACCGGCACCGGCCAAGCTGCTCAATCTCTTGCAGCACACTACACCACCGTGATCGCCACTGACACGAGCCCAAAACAGCTTGAGTTTGCAACCAAACTTCCCAACGTTCACTACCACCACACCCCGTCGACAATGTCCATCGAGGAAGTCGAGAAAATGGTGGCACCACCGGGGTCTGTCGACTTAGTCACTGTGGCACAAGCCCTCCATTGGTTCAACCTCCCATCTTTCTACCAAAACGTACGATGGGTCTTGAAGAAACCTCACGGCGTGATTGCGGCCTGGTGCTACTCATTGCCCGAAGTCAATAATGGCATCGACACTGTCCTCCGCCGCATCTACAAAACAGATTTTGGGCCTTATTGGGAGGCGCCAAGGCGGTTGGTGGATGAAGAGTATAAAACGATTGAGTTCCCATTCGAGGCGGTGGATGGGGAGGAGCCGATAACGGAGTTTGCGGCAGAGAAGGAGATGGAGTTTGAGGAGTATTTGATATATTTAAGGTCTTGGTCATCATATCAAACAGCCAAAGATTTGGGAATAGAGCTTCTAAGTAATGAAGTGGTTGAAGAGCTTGAGAGCGCTTGGAATGAAGATGGGGTTAAGGGTAAAAAAGTGGCCAAATTCCCAATCCATTTGAAGATAGGAAGAGTGGGAAACAATAACTAAATCAAAAAAGAGATCTTGTGTGTGGAGTATGCTCAAACTCTATTGTTAAATCCTTTCCCATTTTCCACCAGAAAGCTATCAATGGGTCACAATGTTTTACAAAATAAACATATGCATCTATACATTGAAAACTAGGCTAAATTATATATATTGTCTGTGTTAAAAATATCTTCCAACTTTCAAAAAAAAAGTTTTAGTTTTGGATGGAAACAGAATTTTGTTTAAAAAGTGCTCTCAACTATTAAAAAATTTCACAAATACCATTTAATTTAAAATATGAAAAAAAAATACTAACACTAACCCAATTTTTACATCAAATTTCTTAGCACCCAAAATAAAATAAAAAATTAAGTTAAAATTAAACGATAGTTCTAAATTTCCATTAGTATATTGATATTTTCACAATTTGATGGATTCGATATCAATCGAATGGGTGAGTTGATATTTCCATTACTTTGTAGAGTACAAATCACAAATCACAACAAATAAACATTAAAATGACACTATTATAAAGTTACCTAGGTTATCATTAATTGAAATAGTCAGTTTTATATAGCAACAATGTTATAACGTAAAAGTGACTATTTCATTATTCCAGTCTTATGTATTATCCTCACTTTCATGTCTTCACGTGAATGATTTAGGATTAGATCGTTTGTACTAACTACAAAGCGAGCCATAACCGTAGTGTTCTCAGAATAAGATGCACAATCTTATTCATATACTATAGAGTGTTACGCTATATACTCGAACTTAACTTGATCCATGTTTATGTCTTTACATAAAGTTCAAGTTTACTTAAGATAGCCTCAGAACCTTAGTTAGGAATTTACACTTGGATATTTGTAAGTTGTTTTGAGGGGGGTATTTTGAGACTTGAGTAATTTGGGAGAGAGTTGGGTTGGGTGGATAAAAAACCCAATCCACTATTTTGTTCACCAATAATTTAAAAGATTTATTACCTTGCTATTCGCATCAACT ATGGCGAAGCTGTTCATAAAACAAGCCAAGAATTATGCAGAAGGAAGACCCAGTTATCCATCCAAGTTGTTTGAATACATTGCTTCCACAACTCCCGCCCACGACCTCGTTTGGGACGTCGGCACCGGCACCGGCCAAGCTGCTCAATCTCTTGCAGCACACTACACCACCGTGATCGCCACTGACACGAGCCCAAAACAGCTTGAGTTTGCAACCAAACTTCCCAACGTTCACTACCACCACACCCCGTCGACAATGTCCATCGAGGAAGTCGAGAAAATGGTGGCACCACCGGGGTCTGTCGACTTAGTCACTGTGGCACAAGCCCTCCATTGGTTCAACCTCCCATCTTTCTACCAAAACGTACGATGGGTCTTGAAGAAACCTCACGGCGTGATTGCGGCCTGGTGCTACTCATTGCCCGAAGTCAATAATGGCATCGACACTGTCCTCCGCCGCATCTACAAAACAGATTTTGGGCCTTATTGGGAGGCGCCAAGGCGGTTGGTGGATGAAGAGTATAAAACGATTGAGTTCCCATTCGAGGCGGTGGATGGGGAGGAGCCGATAACGGAGTTTGCGGCAGAGAAGGAGATGGAGTTTGAGGAGTATTTGATATATTTAAGGTCTTGGTCATCATATCAAACAGCCAAAGATTTGGGAATAGAGCTTCTAAGTAATGAAGTGGTTGAAGAGCTTGAGAGCGCTTGGAATGAAGATGGGGTTAAGGGTAAAAAAGTGGCCAAATTCCCAATCCATTTGAAGATAGGAAGAGTGGGAAACAATAACTAA MAKLFIKQAKNYAEGRPSYPSKLFEYIASTTPAHDLVWDVGTGTGQAAQSLAAHYTTVIATDTSPKQLEFATKLPNVHYHHTPSTMSIEEVEKMVAPPGSVDLVTVAQALHWFNLPSFYQNVRWVLKKPHGVIAAWCYSLPEVNNGIDTVLRRIYKTDFGPYWEAPRRLVDEEYKTIEFPFEAVDGEEPITEFAAEKEMEFEEYLIYLRSWSSYQTAKDLGIELLSNEVVEELESAWNEDGVKGKKVAKFPIHLKIGRVGNNN* Homology
BLAST of CsGy4G016580.2 vs. ExPASy Swiss-Prot
Match: Q55EX9 (Putative methyltransferase DDB_G0268948 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0268948 PE=1 SV=2) HSP 1 Score: 129.4 bits (324), Expect = 5.9e-29 Identity = 82/255 (32.16%), Postives = 126/255 (49.41%), Query Frame = 0
BLAST of CsGy4G016580.2 vs. ExPASy Swiss-Prot
Match: P38892 (Probable S-adenosylmethionine-dependent methyltransferase CRG1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CRG1 PE=1 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 3.4e-08 Identity = 44/143 (30.77%), Postives = 66/143 (46.15%), Query Frame = 0
BLAST of CsGy4G016580.2 vs. ExPASy Swiss-Prot
Match: M1W268 (Methyltransferase CPUR_05424 OS=Claviceps purpurea (strain 20.1) OX=1111077 GN=CPUR_05424 PE=2 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 3.5e-05 Identity = 38/118 (32.20%), Postives = 58/118 (49.15%), Query Frame = 0
BLAST of CsGy4G016580.2 vs. NCBI nr
Match: XP_004142649.2 (putative methyltransferase DDB_G0268948 [Cucumis sativus] >KGN54522.1 hypothetical protein Csa_012001 [Cucumis sativus]) HSP 1 Score: 541 bits (1394), Expect = 2.70e-194 Identity = 262/263 (99.62%), Postives = 263/263 (100.00%), Query Frame = 0
BLAST of CsGy4G016580.2 vs. NCBI nr
Match: KAA0062734.1 (putative methyltransferase [Cucumis melo var. makuwa] >TYK22533.1 putative methyltransferase [Cucumis melo var. makuwa]) HSP 1 Score: 522 bits (1344), Expect = 1.14e-186 Identity = 252/263 (95.82%), Postives = 256/263 (97.34%), Query Frame = 0
BLAST of CsGy4G016580.2 vs. NCBI nr
Match: XP_008455687.1 (PREDICTED: putative methyltransferase DDB_G0268948 [Cucumis melo]) HSP 1 Score: 517 bits (1331), Expect = 1.09e-184 Identity = 251/263 (95.44%), Postives = 255/263 (96.96%), Query Frame = 0
BLAST of CsGy4G016580.2 vs. NCBI nr
Match: XP_038882824.1 (putative methyltransferase DDB_G0268948 [Benincasa hispida]) HSP 1 Score: 482 bits (1241), Expect = 5.70e-171 Identity = 229/263 (87.07%), Postives = 245/263 (93.16%), Query Frame = 0
BLAST of CsGy4G016580.2 vs. NCBI nr
Match: XP_022967887.1 (putative methyltransferase DDB_G0268948 [Cucurbita maxima]) HSP 1 Score: 451 bits (1160), Expect = 1.35e-158 Identity = 216/265 (81.51%), Postives = 235/265 (88.68%), Query Frame = 0
BLAST of CsGy4G016580.2 vs. ExPASy TrEMBL
Match: A0A0A0L1T6 (Methyltransf_11 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G354130 PE=4 SV=1) HSP 1 Score: 541 bits (1394), Expect = 1.31e-194 Identity = 262/263 (99.62%), Postives = 263/263 (100.00%), Query Frame = 0
BLAST of CsGy4G016580.2 vs. ExPASy TrEMBL
Match: A0A5D3DG59 (Putative methyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold523G00150 PE=4 SV=1) HSP 1 Score: 522 bits (1344), Expect = 5.50e-187 Identity = 252/263 (95.82%), Postives = 256/263 (97.34%), Query Frame = 0
BLAST of CsGy4G016580.2 vs. ExPASy TrEMBL
Match: A0A1S3C1E9 (putative methyltransferase DDB_G0268948 OS=Cucumis melo OX=3656 GN=LOC103495802 PE=4 SV=1) HSP 1 Score: 517 bits (1331), Expect = 5.27e-185 Identity = 251/263 (95.44%), Postives = 255/263 (96.96%), Query Frame = 0
BLAST of CsGy4G016580.2 vs. ExPASy TrEMBL
Match: A0A6J1HS18 (putative methyltransferase DDB_G0268948 OS=Cucurbita maxima OX=3661 GN=LOC111467263 PE=4 SV=1) HSP 1 Score: 451 bits (1160), Expect = 6.54e-159 Identity = 216/265 (81.51%), Postives = 235/265 (88.68%), Query Frame = 0
BLAST of CsGy4G016580.2 vs. ExPASy TrEMBL
Match: A0A6J1F317 (putative methyltransferase DDB_G0268948 OS=Cucurbita moschata OX=3662 GN=LOC111439417 PE=4 SV=1) HSP 1 Score: 447 bits (1150), Expect = 2.18e-157 Identity = 213/265 (80.38%), Postives = 235/265 (88.68%), Query Frame = 0
BLAST of CsGy4G016580.2 vs. TAIR 10
Match: AT2G41380.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 337.8 bits (865), Expect = 7.8e-93 Identity = 168/265 (63.40%), Postives = 199/265 (75.09%), Query Frame = 0
BLAST of CsGy4G016580.2 vs. TAIR 10
Match: AT5G10830.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 195.7 bits (496), Expect = 4.8e-50 Identity = 101/240 (42.08%), Postives = 146/240 (60.83%), Query Frame = 0
BLAST of CsGy4G016580.2 vs. TAIR 10
Match: AT4G22530.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 191.4 bits (485), Expect = 9.0e-49 Identity = 102/241 (42.32%), Postives = 147/241 (61.00%), Query Frame = 0
BLAST of CsGy4G016580.2 vs. TAIR 10
Match: AT3G54150.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 178.7 bits (452), Expect = 6.1e-45 Identity = 97/262 (37.02%), Postives = 152/262 (58.02%), Query Frame = 0
BLAST of CsGy4G016580.2 vs. TAIR 10
Match: AT3G61210.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 169.5 bits (428), Expect = 3.7e-42 Identity = 88/244 (36.07%), Postives = 141/244 (57.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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