CsGy4G016020.1 (mRNA) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTATTCTATACTTTTCTTAAATTTATAGAATTAAATAGGCATAAACTTTTGAAGATCACCAAACTAATTATAATTTAATTACAAAAATTAAATTCCTTATTATTATTATTATTTTAAGATTTGTAGATTCATTCTCTCTATATATAGTTCAACCATCGCCCTTTGCTTTTTTATTTTTTTCATAATTCACTCTCTCTCTCTCTCTCTCTCTCTCTCTCACCGCGGTGGTTCGGAGGACGAGGAGGCGGCGGCGGCCGGAGCTACATATGATCATAATCGGAGAAATGGTCCGGCGTGCACGAGAGATAATATCGATGATTTTCTTTGCGGTGTTATCGAGCGCCACCGGAGTAACGCCGCCGTACTGGAGCCGAGGTGGGGGAGCAAGCTGCAGTCCGTGCCTGAGCTGGAGGCTGGCAGCGGAGACTAACAATGTGGAGCCATGGAGGACGGTGCCGGCGCATTGCTTCAGCTGTATCGGAGCGTACATAACGGGAGGGCAGTACCAGCACGATGTCCGATTCGTGGTGGAGCAAATTATGAGCTACACAGAGGGAATTACGGTGGCCGGCGACGGACTAGATGCTTGGGTTCTTGATGTGGATGATACTTGCATCTCTAACGTTGATTATTATAAAGTTAAGAGATATGGGTAAGCCTTTTCTACTCTCTAAGTCTAAAATTTCGGCCATTGTGAATTTTAGGGAATTTCAATGTGAATTTTTTTCTACAATTTTTCGATATATCAAAATTATTTAAAAGAATTCACCATATATAAGATAAGATAAATTACGATAATCTATATTTATTATTGTTTGTATTAAATTTAAATGTTATTACAAATCTCGAAGGTAAAACGTTAGAAATAATTAAAATTAGTGATTTAAGTTTTATGAAATTTGGGTTTAATTTATGTGTGGCTTCTTTCTTTTCTTATGGATTTGAAGTTCTTTTTTTCTATGGATAATTAAAATTATGTGTGGATATTGTTGAAAACTTCTTAAATTGTTTCATTTTTTTATTGAAGATTATAGCTAATATTTTATAAGCTGAAGATGAAGTTAAATTAGATATTTTAAAAATAAAAAAGAGCAAAATAAGATGAACTTAAAATTTAGTAACTAAAATGAAATTACAACAATTAATTAATTAATTAATTTTAATTTTTTTTTTCATATATCGATATAGTTGTAATTTCAATATATAAAACAAACAAAAATAGAATTATAAGAAATCCAAATCCAATAATGAAAATATATTCAAATCTAGCCATGAAAAAAACTATATATAAATAGTGTCCAACACAATTAGGGAAAAAAACTAGTGGCTTAGAAATAGCTTAATTTAGTCACAAATCTTAAGAATAATTGGAAACTAATTGGCTTTTTATAAACAAATTAAATAACGTAGGATATAAAGTTTCTCATAATGTTTAATTTAGTGATATTTAAAATATAGTAAAGTTAAATTTGACTTTTAAAAAAAAAATATTTAAATTACAAATTTGGTCACTAAAGTTATAGAAAGTTCACATCCATTTTAAAAGTTTCATTACCAAACAATTTTAGCATTAAAAAATCAAATCTTTTATCTAATTTTGGCTACCACTTTGTTCTTTCTTTTTTCCTATTTTTCTTTAATTATTCGTATAATTTACACTTTTTTAGGCATTTAAAATATAACCAAATAAAATAAAATATAAAATATAACCAAATTTTGGATATTTGAATAACTATATTTTTGTAATACTTTTCATAGTTTTACTATTTACAATCAATTTCCTAACTTTCTATTATCTACCTTAAAAAAAAATCTTTTGAAAATTAAAGAGATGTGACACCTAGTTTTTAATTAAAACTTAACATTGGTTGATATATAAATTGTAAATTTGTTGATGTTTACCATTAATAATTAGAATGTGCTCGTTTATAATTTTTAAAATTTTAGAGACAAATTTTTAACTTTTTTTCAAATTAGCCAACAACAGCTTAATTCAACCTATATTCGTAGAAATAAGGGTACTTATTTTTTGTTTTCCTTAACTTTATGTTTTAATTTATATTAAGTGGTTTTGTTTGGACAATTATTTCGAATGTCAAAGCTTCTAAAAAATATTTATAAATATAAGAAAATATCATAATTTATATTACGATACATTATTATCCGTGTCTATATGGTCTATTTTAATACATCTATGATATTTTTCTATATTATGTAGATGTGTTGGTTGGTTTTGTTATATTTGAAAGTAGTTTTTTTATTTAAATTTTTTGTTAGAAAAATTCATATAAGATAAAGAGAATTGTATGGAACAGGTGCGATCCGTACGATCCACCAGCATTTAGGTCATGGGCGATGGAAGGAGCATGTCCGGCGATCCAACCGGTGGCAGAGCTCTTCACAAAGCTCATGAAAAGCGGCTTCAAAGTCTTCCTTGTCACCGGTCGTGATGAAGAGACTCTTGGCCAAGTCACCGTCGAGAATCTCCATCGCGAGGGCTTCATTGGCTACGAACGCATAATCTTAAGGTACTATATATTAAAATCACACTTGCTTTTCACACAACATGTACAACGTAACCATTATTGTTCAATTCACTTAAGGAATCTTTTCGATTAGGACCGCGGCGGAAAAAGGGCGAAGTGCGGTGGAGTTCAAGACAGAGATTCGGCGGCGACTGGTGGAGCAAGGATATAGAATTTGGGGTAACGTTGGAGATCAATGGAGCGATCTTCAAGGGCAATTTGTGGGAAAGCGCACTTTTAAATTACCTAATCCTATGTATTTCGTTCCTTAAATGTTACTTAAATTATAATTGAAAATAACGATAAACCAATAAATGTCGAAGAAAAGTATCGATGTTTATTGATGTAATTATTTGTGGTTGTAGATTTATAGAGATGTCGATAAAAGATCGATATATAATAATGTATAAACCAAAGCACTTATATGAACATTGTTTTAATTGATATATACTCTTACAAGCAATTTCTATACCAAAATTATTCGTGCTATAAAATTTAAAGATTGTTTGGAAAGATTATTGGGAGAGAGGTGTTGGAAAGTGGTCAAAAATGAAAAAAATGAGATCGTGAAACTTTCGCGTGAAAACAATGTAAAAAGAATCCATCCCTCTCAATGATCTGAGAGATATTCGGTTTGTAGGTTGGACCTCTCAATGGCCTGGGAAAGATTCGGTTTGTAGGTTGGACCTTAAAATAATTGTTCAGAAACAAGATGTAAACTCAGGGATAAAACGGTAGTTTAAACCAACCAAGAGATCTATAATAACTTGTATTTCTACAAGTTATCATAACTCTA CTATTCTATACTTTTCTTAAATTTATAGAATTAAATAGGCATAAACTTTTGAAGATCACCAAACTAATTATAATTTAATTACAAAAATTAAATTCCTTATTATTATTATTATTTTAAGATTTGTAGATTCATTCTCTCTATATATAGTTCAACCATCGCCCTTTGCTTTTTTATTTTTTTCATAATTCACTCTCTCTCTCTCTCTCTCTCTCTCTCTCACCGCGGTGGTTCGGAGGACGAGGAGGCGGCGGCGGCCGGAGCTACATATGATCATAATCGGAGAAATGGTCCGGCGTGCACGAGAGATAATATCGATGATTTTCTTTGCGGTGTTATCGAGCGCCACCGGAGTAACGCCGCCGTACTGGAGCCGAGGTGGGGGAGCAAGCTGCAGTCCGTGCCTGAGCTGGAGGCTGGCAGCGGAGACTAACAATGTGGAGCCATGGAGGACGGTGCCGGCGCATTGCTTCAGCTGTATCGGAGCGTACATAACGGGAGGGCAGTACCAGCACGATGTCCGATTCGTGGTGGAGCAAATTATGAGCTACACAGAGGGAATTACGGTGGCCGGCGACGGACTAGATGCTTGGGTTCTTGATGTGGATGATACTTGCATCTCTAACGTTGATTATTATAAAGTTAAGAGATATGGGTGCGATCCGTACGATCCACCAGCATTTAGGTCATGGGCGATGGAAGGAGCATGTCCGGCGATCCAACCGGTGGCAGAGCTCTTCACAAAGCTCATGAAAAGCGGCTTCAAAGTCTTCCTTGTCACCGGTCGTGATGAAGAGACTCTTGGCCAAGTCACCGTCGAGAATCTCCATCGCGAGGGCTTCATTGGCTACGAACGCATAATCTTAAGGACCGCGGCGGAAAAAGGGCGAAGTGCGGTGGAGTTCAAGACAGAGATTCGGCGGCGACTGGTGGAGCAAGGATATAGAATTTGGGGTAACGTTGGAGATCAATGGAGCGATCTTCAAGGGCAATTTGTGGGAAAGCGCACTTTTAAATTACCTAATCCTATGTATTTCGTTCCTTAAATGTTACTTAAATTATAATTGAAAATAACGATAAACCAATAAATGTCGAAGAAAAGTATCGATGTTTATTGATGTAATTATTTGTGGTTGTAGATTTATAGAGATGTCGATAAAAGATCGATATATAATAATGTATAAACCAAAGCACTTATATGAACATTGTTTTAATTGATATATACTCTTACAAGCAATTTCTATACCAAAATTATTCGTGCTATAAAATTTAAAGATTGTTTGGAAAGATTATTGGGAGAGAGGTGTTGGAAAGTGGTCAAAAATGAAAAAAATGAGATCGTGAAACTTTCGCGTGAAAACAATGTAAAAAGAATCCATCCCTCTCAATGATCTGAGAGATATTCGGTTTGTAGGTTGGACCTCTCAATGGCCTGGGAAAGATTCGGTTTGTAGGTTGGACCTTAAAATAATTGTTCAGAAACAAGATGTAAACTCAGGGATAAAACGGTAGTTTAAACCAACCAAGAGATCTATAATAACTTGTATTTCTACAAGTTATCATAACTCTA ATGATCATAATCGGAGAAATGGTCCGGCGTGCACGAGAGATAATATCGATGATTTTCTTTGCGGTGTTATCGAGCGCCACCGGAGTAACGCCGCCGTACTGGAGCCGAGGTGGGGGAGCAAGCTGCAGTCCGTGCCTGAGCTGGAGGCTGGCAGCGGAGACTAACAATGTGGAGCCATGGAGGACGGTGCCGGCGCATTGCTTCAGCTGTATCGGAGCGTACATAACGGGAGGGCAGTACCAGCACGATGTCCGATTCGTGGTGGAGCAAATTATGAGCTACACAGAGGGAATTACGGTGGCCGGCGACGGACTAGATGCTTGGGTTCTTGATGTGGATGATACTTGCATCTCTAACGTTGATTATTATAAAGTTAAGAGATATGGGTGCGATCCGTACGATCCACCAGCATTTAGGTCATGGGCGATGGAAGGAGCATGTCCGGCGATCCAACCGGTGGCAGAGCTCTTCACAAAGCTCATGAAAAGCGGCTTCAAAGTCTTCCTTGTCACCGGTCGTGATGAAGAGACTCTTGGCCAAGTCACCGTCGAGAATCTCCATCGCGAGGGCTTCATTGGCTACGAACGCATAATCTTAAGGACCGCGGCGGAAAAAGGGCGAAGTGCGGTGGAGTTCAAGACAGAGATTCGGCGGCGACTGGTGGAGCAAGGATATAGAATTTGGGGTAACGTTGGAGATCAATGGAGCGATCTTCAAGGGCAATTTGTGGGAAAGCGCACTTTTAAATTACCTAATCCTATGTATTTCGTTCCTTAA MIIIGEMVRRAREIISMIFFAVLSSATGVTPPYWSRGGGASCSPCLSWRLAAETNNVEPWRTVPAHCFSCIGAYITGGQYQHDVRFVVEQIMSYTEGITVAGDGLDAWVLDVDDTCISNVDYYKVKRYGCDPYDPPAFRSWAMEGACPAIQPVAELFTKLMKSGFKVFLVTGRDEETLGQVTVENLHREGFIGYERIILRTAAEKGRSAVEFKTEIRRRLVEQGYRIWGNVGDQWSDLQGQFVGKRTFKLPNPMYFVP* Homology
BLAST of CsGy4G016020.1 vs. ExPASy Swiss-Prot
Match: P27061 (Acid phosphatase 1 OS=Solanum lycopersicum OX=4081 GN=APS1 PE=2 SV=1) HSP 1 Score: 206.1 bits (523), Expect = 4.9e-52 Identity = 90/213 (42.25%), Postives = 133/213 (62.44%), Query Frame = 0
BLAST of CsGy4G016020.1 vs. ExPASy Swiss-Prot
Match: O49195 (Vegetative storage protein 1 OS=Arabidopsis thaliana OX=3702 GN=VSP1 PE=1 SV=2) HSP 1 Score: 160.2 bits (404), Expect = 3.1e-38 Identity = 81/216 (37.50%), Postives = 130/216 (60.19%), Query Frame = 0
BLAST of CsGy4G016020.1 vs. ExPASy Swiss-Prot
Match: P15490 (Stem 28 kDa glycoprotein OS=Glycine max OX=3847 GN=VSPA PE=2 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 4.0e-38 Identity = 80/215 (37.21%), Postives = 121/215 (56.28%), Query Frame = 0
BLAST of CsGy4G016020.1 vs. ExPASy Swiss-Prot
Match: O82122 (Vegetative storage protein 2 OS=Arabidopsis thaliana OX=3702 GN=VSP2 PE=2 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 9.9e-37 Identity = 78/216 (36.11%), Postives = 126/216 (58.33%), Query Frame = 0
BLAST of CsGy4G016020.1 vs. ExPASy Swiss-Prot
Match: P10743 (Stem 31 kDa glycoprotein OS=Glycine max OX=3847 GN=VSPB PE=2 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 9.9e-37 Identity = 77/214 (35.98%), Postives = 124/214 (57.94%), Query Frame = 0
BLAST of CsGy4G016020.1 vs. NCBI nr
Match: XP_004142728.2 (acid phosphatase 1 [Cucumis sativus] >KGN54464.1 hypothetical protein Csa_012430 [Cucumis sativus]) HSP 1 Score: 538 bits (1387), Expect = 2.14e-193 Identity = 257/258 (99.61%), Postives = 257/258 (99.61%), Query Frame = 0
BLAST of CsGy4G016020.1 vs. NCBI nr
Match: XP_008463285.1 (PREDICTED: acid phosphatase 1 isoform X1 [Cucumis melo]) HSP 1 Score: 516 bits (1330), Expect = 1.05e-184 Identity = 243/258 (94.19%), Postives = 249/258 (96.51%), Query Frame = 0
BLAST of CsGy4G016020.1 vs. NCBI nr
Match: XP_038882956.1 (acid phosphatase 1 [Benincasa hispida]) HSP 1 Score: 499 bits (1285), Expect = 7.62e-178 Identity = 231/258 (89.53%), Postives = 246/258 (95.35%), Query Frame = 0
BLAST of CsGy4G016020.1 vs. NCBI nr
Match: XP_023544863.1 (acid phosphatase 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 481 bits (1239), Expect = 7.84e-171 Identity = 223/258 (86.43%), Postives = 241/258 (93.41%), Query Frame = 0
BLAST of CsGy4G016020.1 vs. NCBI nr
Match: XP_022950507.1 (acid phosphatase 1 [Cucurbita moschata] >KAG7033707.1 Acid phosphatase 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 479 bits (1232), Expect = 9.14e-170 Identity = 222/258 (86.05%), Postives = 239/258 (92.64%), Query Frame = 0
BLAST of CsGy4G016020.1 vs. ExPASy TrEMBL
Match: A0A0A0L074 (Acid phosphatase 1 OS=Cucumis sativus OX=3659 GN=Csa_4G335240 PE=4 SV=1) HSP 1 Score: 538 bits (1387), Expect = 1.04e-193 Identity = 257/258 (99.61%), Postives = 257/258 (99.61%), Query Frame = 0
BLAST of CsGy4G016020.1 vs. ExPASy TrEMBL
Match: A0A1S3CIU7 (acid phosphatase 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501480 PE=4 SV=1) HSP 1 Score: 516 bits (1330), Expect = 5.09e-185 Identity = 243/258 (94.19%), Postives = 249/258 (96.51%), Query Frame = 0
BLAST of CsGy4G016020.1 vs. ExPASy TrEMBL
Match: A0A6J1GF06 (acid phosphatase 1 OS=Cucurbita moschata OX=3662 GN=LOC111453597 PE=4 SV=1) HSP 1 Score: 479 bits (1232), Expect = 4.43e-170 Identity = 222/258 (86.05%), Postives = 239/258 (92.64%), Query Frame = 0
BLAST of CsGy4G016020.1 vs. ExPASy TrEMBL
Match: A0A6J1IM85 (acid phosphatase 1 OS=Cucurbita maxima OX=3661 GN=LOC111478301 PE=4 SV=1) HSP 1 Score: 466 bits (1198), Expect = 6.73e-165 Identity = 215/258 (83.33%), Postives = 237/258 (91.86%), Query Frame = 0
BLAST of CsGy4G016020.1 vs. ExPASy TrEMBL
Match: A0A6J1CSE1 (acid phosphatase 1 OS=Momordica charantia OX=3673 GN=LOC111013866 PE=4 SV=1) HSP 1 Score: 441 bits (1134), Expect = 3.67e-155 Identity = 203/256 (79.30%), Postives = 223/256 (87.11%), Query Frame = 0
BLAST of CsGy4G016020.1 vs. TAIR 10
Match: AT2G38600.1 (HAD superfamily, subfamily IIIB acid phosphatase ) HSP 1 Score: 332.8 bits (852), Expect = 2.5e-91 Identity = 153/252 (60.71%), Postives = 185/252 (73.41%), Query Frame = 0
BLAST of CsGy4G016020.1 vs. TAIR 10
Match: AT4G29260.1 (HAD superfamily, subfamily IIIB acid phosphatase ) HSP 1 Score: 221.9 bits (564), Expect = 6.1e-58 Identity = 96/241 (39.83%), Postives = 146/241 (60.58%), Query Frame = 0
BLAST of CsGy4G016020.1 vs. TAIR 10
Match: AT4G29270.1 (HAD superfamily, subfamily IIIB acid phosphatase ) HSP 1 Score: 215.3 bits (547), Expect = 5.7e-56 Identity = 105/249 (42.17%), Postives = 146/249 (58.63%), Query Frame = 0
BLAST of CsGy4G016020.1 vs. TAIR 10
Match: AT4G25150.1 (HAD superfamily, subfamily IIIB acid phosphatase ) HSP 1 Score: 208.4 bits (529), Expect = 7.0e-54 Identity = 94/214 (43.93%), Postives = 134/214 (62.62%), Query Frame = 0
BLAST of CsGy4G016020.1 vs. TAIR 10
Match: AT5G51260.1 (HAD superfamily, subfamily IIIB acid phosphatase ) HSP 1 Score: 203.0 bits (515), Expect = 2.9e-52 Identity = 91/214 (42.52%), Postives = 136/214 (63.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|