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CsGy4G000890.1 (mRNA) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTTTATATACTTAATTATTATGCAATTAATTTATGTAGTAAAAAGTAAAAGAAAGAGGCGAGAGAAGAAGGAAAGGCAAGCGGGTGAAATGGGAAGAAGCTTCCTGAGTTTCTTCACTGTCTTCCACCAACGTAACGACGCCTACAAAAACCTCTTCTCCTCTCTTTCTCCTTTCATCCATCCTTCATTCCTATCTATCCTCTCTTCTTCTTCTTCTTCTTTTCTCTACAATCCCCATTTTTCTAATCATGTGTGGTGGCGCCATTATCGCCGACTTCATCCCTCGCCGTGACGGCCAACGCGTTACTGCTTCCGACATTTGGCCTAACTCCTCCCTTTTCCATTTCAACAAAATTCCCTCCAATCAAGTTTCGACTCCCCTCAAACGAACACCCCTTCCTTCTTCCGGTAAGATCATTTCTCCACTCCTTCTCCTCTTCTTTTCTTCTCCATTCGTGGTCGCCTTTTTGTTGTTTTATAAATAAATTTCATGGTTAATTAATTTCAGAGGCTTCGAAGCCCAAGAAGCGGCAGAGGAAGAATCTTTACAGAGGAATTCGTCAGCGCCCATGGGGAAAATGGGCGGCTGAGATTCGTGATCCCAGGAAGGGGATCCGTGTCTGGCTTGGGACTTTCAATACGGCTGAGGAAGCCGCTCGAGCTTACGATCGAGAAGCTCGCAAGATTCGTGGAAAGAAAGCCAAGGTCAATTTCCCTAATGAAGATGATACATATTCCATTCAAGCTCCCATTCCTCAATTTCACCCTCATCTCTACACTGTCCCTGAAAATTCCGAATTCCCCTACGATCTCAACCAAATCGGTGATTTCACCAGCACTCACTTTCCCGTGGCGATTGAGGAACAATCCGGCTCTGGGTCGGAGGATTCTTATCCTCCACCGGAGAGATTCGGTGTGAAAGAGTCTTCTGAAGAGAAGCCGGAGCAGAAGGTTAGCGTTATTGCTGCAGTGGAGGAAGAGAACGAGGTGCAAAAGCTTTCTGAGGAATTAATGGCGTATGAGAACTTCATGAAGTTCTACCAGATTCCATACCTTGACGGTCAGTCGACGGTGACGAATCCAGCAGAAGAACAGGTGGTGGGCGATCTCTGGAGCTTCGACGACGAGGATGGCCTTCACGGCTCTGTTTCGTCGTCTGAATTATGATGATTGATGATCCAATAACTTCTCTGAATTATCGGCCACTCCATCTCAAACCGGTTTCCTCCATTTTCAATTGTTGTTTTGTTATTTAAATTCCAGAATGTGTTTTGTGTAAGTTTCTGTGGTTGAACGATGTCAATTTGTTGATATGAAATTGTTCTTTGTACGATTCTGTTTCTCAATCAACATTCCATTAATTCATTTATTTAATGAAATAAACAGAAATCTTTCATTTACATCAAAGATCCCATTCCAAAGCACACTGATCTCAAGTACAAGGCAACTTTTTTTTGTTCTTTGATGAATTAACTCAGATTTGGTGAAGTTTTTAGTTGATGAATAATATACGAGTATTATGTTATAGGACAATAATCTAATTAAACATGTTTAATTTAGGTATAAAGTAAAAACGTTAATCTCTTGAGAGGAATAACATAATACCATTTTGTGTTGCGATGGAGAATAAACAAAGATACTGGAAGATTGATTGAATTGGTTGCTTAATTGAAGAAAAAGATCCAAAATGAAAGAAAGATTATAACAATAAGATGAGCATAGGTAAATTGGAGGAAGTAATTTAGTTTGAAATTTATGGTAAGTTGTTGGGGGTAAGTAAGTAAGTAAGTTGAAGAATAGAGAATAAAAGAGAAAACTATGGGTTAAGAGAAAAAG GTTTTATATACTTAATTATTATGCAATTAATTTATGTAGTAAAAAGTAAAAGAAAGAGGCGAGAGAAGAAGGAAAGGCAAGCGGGTGAAATGGGAAGAAGCTTCCTGAGTTTCTTCACTGTCTTCCACCAACGTAACGACGCCTACAAAAACCTCTTCTCCTCTCTTTCTCCTTTCATCCATCCTTCATTCCTATCTATCCTCTCTTCTTCTTCTTCTTCTTTTCTCTACAATCCCCATTTTTCTAATCATGTGTGGTGGCGCCATTATCGCCGACTTCATCCCTCGCCGTGACGGCCAACGCGTTACTGCTTCCGACATTTGGCCTAACTCCTCCCTTTTCCATTTCAACAAAATTCCCTCCAATCAAGTTTCGACTCCCCTCAAACGAACACCCCTTCCTTCTTCCGAGGCTTCGAAGCCCAAGAAGCGGCAGAGGAAGAATCTTTACAGAGGAATTCGTCAGCGCCCATGGGGAAAATGGGCGGCTGAGATTCGTGATCCCAGGAAGGGGATCCGTGTCTGGCTTGGGACTTTCAATACGGCTGAGGAAGCCGCTCGAGCTTACGATCGAGAAGCTCGCAAGATTCGTGGAAAGAAAGCCAAGGTCAATTTCCCTAATGAAGATGATACATATTCCATTCAAGCTCCCATTCCTCAATTTCACCCTCATCTCTACACTGTCCCTGAAAATTCCGAATTCCCCTACGATCTCAACCAAATCGGTGATTTCACCAGCACTCACTTTCCCGTGGCGATTGAGGAACAATCCGGCTCTGGGTCGGAGGATTCTTATCCTCCACCGGAGAGATTCGGTGTGAAAGAGTCTTCTGAAGAGAAGCCGGAGCAGAAGGTTAGCGTTATTGCTGCAGTGGAGGAAGAGAACGAGGTGCAAAAGCTTTCTGAGGAATTAATGGCGTATGAGAACTTCATGAAGTTCTACCAGATTCCATACCTTGACGGTCAGTCGACGGTGACGAATCCAGCAGAAGAACAGGTGGTGGGCGATCTCTGGAGCTTCGACGACGAGGATGGCCTTCACGGCTCTGTTTCGTCGTCTGAATTATGATGATTGATGATCCAATAACTTCTCTGAATTATCGGCCACTCCATCTCAAACCGGTTTCCTCCATTTTCAATTGTTGTTTTGTTATTTAAATTCCAGAATGTGTTTTGTGTAAGTTTCTGTGGTTGAACGATGTCAATTTGTTGATATGAAATTGTTCTTTGTACGATTCTGTTTCTCAATCAACATTCCATTAATTCATTTATTTAATGAAATAAACAGAAATCTTTCATTTACATCAAAGATCCCATTCCAAAGCACACTGATCTCAAGTACAAGGCAACTTTTTTTTGTTCTTTGATGAATTAACTCAGATTTGGTGAAGTTTTTAGTTGATGAATAATATACGAGTATTATGTTATAGGACAATAATCTAATTAAACATGTTTAATTTAGGTATAAAGTAAAAACGTTAATCTCTTGAGAGGAATAACATAATACCATTTTGTGTTGCGATGGAGAATAAACAAAGATACTGGAAGATTGATTGAATTGGTTGCTTAATTGAAGAAAAAGATCCAAAATGAAAGAAAGATTATAACAATAAGATGAGCATAGGTAAATTGGAGGAAGTAATTTAGTTTGAAATTTATGGTAAGTTGTTGGGGGTAAGTAAGTAAGTAAGTTGAAGAATAGAGAATAAAAGAGAAAACTATGGGTTAAGAGAAAAAG ATGTGTGGTGGCGCCATTATCGCCGACTTCATCCCTCGCCGTGACGGCCAACGCGTTACTGCTTCCGACATTTGGCCTAACTCCTCCCTTTTCCATTTCAACAAAATTCCCTCCAATCAAGTTTCGACTCCCCTCAAACGAACACCCCTTCCTTCTTCCGAGGCTTCGAAGCCCAAGAAGCGGCAGAGGAAGAATCTTTACAGAGGAATTCGTCAGCGCCCATGGGGAAAATGGGCGGCTGAGATTCGTGATCCCAGGAAGGGGATCCGTGTCTGGCTTGGGACTTTCAATACGGCTGAGGAAGCCGCTCGAGCTTACGATCGAGAAGCTCGCAAGATTCGTGGAAAGAAAGCCAAGGTCAATTTCCCTAATGAAGATGATACATATTCCATTCAAGCTCCCATTCCTCAATTTCACCCTCATCTCTACACTGTCCCTGAAAATTCCGAATTCCCCTACGATCTCAACCAAATCGGTGATTTCACCAGCACTCACTTTCCCGTGGCGATTGAGGAACAATCCGGCTCTGGGTCGGAGGATTCTTATCCTCCACCGGAGAGATTCGGTGTGAAAGAGTCTTCTGAAGAGAAGCCGGAGCAGAAGGTTAGCGTTATTGCTGCAGTGGAGGAAGAGAACGAGGTGCAAAAGCTTTCTGAGGAATTAATGGCGTATGAGAACTTCATGAAGTTCTACCAGATTCCATACCTTGACGGTCAGTCGACGGTGACGAATCCAGCAGAAGAACAGGTGGTGGGCGATCTCTGGAGCTTCGACGACGAGGATGGCCTTCACGGCTCTGTTTCGTCGTCTGAATTATGA MCGGAIIADFIPRRDGQRVTASDIWPNSSLFHFNKIPSNQVSTPLKRTPLPSSEASKPKKRQRKNLYRGIRQRPWGKWAAEIRDPRKGIRVWLGTFNTAEEAARAYDREARKIRGKKAKVNFPNEDDTYSIQAPIPQFHPHLYTVPENSEFPYDLNQIGDFTSTHFPVAIEEQSGSGSEDSYPPPERFGVKESSEEKPEQKVSVIAAVEEENEVQKLSEELMAYENFMKFYQIPYLDGQSTVTNPAEEQVVGDLWSFDDEDGLHGSVSSSEL* Homology
BLAST of CsGy4G000890.1 vs. ExPASy Swiss-Prot
Match: O22259 (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana OX=3702 GN=ERF071 PE=1 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 2.2e-34 Identity = 104/263 (39.54%), Postives = 129/263 (49.05%), Query Frame = 0
BLAST of CsGy4G000890.1 vs. ExPASy Swiss-Prot
Match: P42736 (Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana OX=3702 GN=RAP2-3 PE=1 SV=2) HSP 1 Score: 143.3 bits (360), Expect = 4.1e-33 Identity = 74/138 (53.62%), Postives = 101/138 (73.19%), Query Frame = 0
BLAST of CsGy4G000890.1 vs. ExPASy Swiss-Prot
Match: Q9LUM4 (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana OX=3702 GN=RAP2-2 PE=1 SV=2) HSP 1 Score: 131.0 bits (328), Expect = 2.1e-29 Identity = 83/186 (44.62%), Postives = 94/186 (50.54%), Query Frame = 0
BLAST of CsGy4G000890.1 vs. ExPASy Swiss-Prot
Match: Q6K7E6 (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=EREBP1 PE=1 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 3.0e-28 Identity = 60/74 (81.08%), Postives = 66/74 (89.19%), Query Frame = 0
BLAST of CsGy4G000890.1 vs. ExPASy Swiss-Prot
Match: Q8H0T5 (Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana OX=3702 GN=ERF073 PE=1 SV=2) HSP 1 Score: 127.1 bits (318), Expect = 3.0e-28 Identity = 91/251 (36.25%), Postives = 137/251 (54.58%), Query Frame = 0
BLAST of CsGy4G000890.1 vs. NCBI nr
Match: XP_004152238.1 (ethylene-responsive transcription factor ERF073 [Cucumis sativus] >KGN52830.1 hypothetical protein Csa_015409 [Cucumis sativus]) HSP 1 Score: 549 bits (1415), Expect = 3.41e-197 Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0
BLAST of CsGy4G000890.1 vs. NCBI nr
Match: NP_001306244.1 (ethylene-responsive transcription factor ERF071 [Cucumis melo] >KAA0044394.1 ethylene-responsive transcription factor ERF071 [Cucumis melo var. makuwa] >TYK29522.1 ethylene-responsive transcription factor ERF071 [Cucumis melo var. makuwa] >BAD01556.1 ERF-like protein [Cucumis melo]) HSP 1 Score: 520 bits (1338), Expect = 1.94e-185 Identity = 258/273 (94.51%), Postives = 264/273 (96.70%), Query Frame = 0
BLAST of CsGy4G000890.1 vs. NCBI nr
Match: AHN92190.1 (ERF protein 2 [Citrullus lanatus]) HSP 1 Score: 494 bits (1272), Expect = 6.40e-175 Identity = 246/273 (90.11%), Postives = 258/273 (94.51%), Query Frame = 0
BLAST of CsGy4G000890.1 vs. NCBI nr
Match: XP_038903554.1 (ethylene-responsive transcription factor ERF071 [Benincasa hispida]) HSP 1 Score: 446 bits (1148), Expect = 3.32e-156 Identity = 239/294 (81.29%), Postives = 254/294 (86.39%), Query Frame = 0
BLAST of CsGy4G000890.1 vs. NCBI nr
Match: XP_022934248.1 (ethylene-responsive transcription factor ERF071 isoform X1 [Cucurbita moschata]) HSP 1 Score: 407 bits (1047), Expect = 1.29e-140 Identity = 226/307 (73.62%), Postives = 245/307 (79.80%), Query Frame = 0
BLAST of CsGy4G000890.1 vs. ExPASy TrEMBL
Match: A0A0A0KT75 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G001970 PE=4 SV=1) HSP 1 Score: 549 bits (1415), Expect = 1.65e-197 Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0
BLAST of CsGy4G000890.1 vs. ExPASy TrEMBL
Match: Q75UJ4 (ERF-like protein OS=Cucumis melo OX=3656 GN=CMe-ERF2 PE=2 SV=1) HSP 1 Score: 520 bits (1338), Expect = 9.39e-186 Identity = 258/273 (94.51%), Postives = 264/273 (96.70%), Query Frame = 0
BLAST of CsGy4G000890.1 vs. ExPASy TrEMBL
Match: A0A5A7TMN4 (Ethylene-responsive transcription factor ERF071 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001250 PE=4 SV=1) HSP 1 Score: 520 bits (1338), Expect = 9.39e-186 Identity = 258/273 (94.51%), Postives = 264/273 (96.70%), Query Frame = 0
BLAST of CsGy4G000890.1 vs. ExPASy TrEMBL
Match: X2KU70 (ERF protein 2 OS=Citrullus lanatus OX=3654 PE=2 SV=1) HSP 1 Score: 494 bits (1272), Expect = 3.10e-175 Identity = 246/273 (90.11%), Postives = 258/273 (94.51%), Query Frame = 0
BLAST of CsGy4G000890.1 vs. ExPASy TrEMBL
Match: A0A6J1F751 (ethylene-responsive transcription factor ERF071 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441468 PE=4 SV=1) HSP 1 Score: 407 bits (1047), Expect = 6.26e-141 Identity = 226/307 (73.62%), Postives = 245/307 (79.80%), Query Frame = 0
BLAST of CsGy4G000890.1 vs. TAIR 10
Match: AT2G47520.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 147.5 bits (371), Expect = 1.5e-35 Identity = 104/263 (39.54%), Postives = 129/263 (49.05%), Query Frame = 0
BLAST of CsGy4G000890.1 vs. TAIR 10
Match: AT3G16770.1 (ethylene-responsive element binding protein ) HSP 1 Score: 143.3 bits (360), Expect = 2.9e-34 Identity = 74/138 (53.62%), Postives = 101/138 (73.19%), Query Frame = 0
BLAST of CsGy4G000890.1 vs. TAIR 10
Match: AT3G14230.3 (related to AP2 2 ) HSP 1 Score: 131.7 bits (330), Expect = 8.8e-31 Identity = 83/181 (45.86%), Postives = 93/181 (51.38%), Query Frame = 0
BLAST of CsGy4G000890.1 vs. TAIR 10
Match: AT3G14230.2 (related to AP2 2 ) HSP 1 Score: 131.3 bits (329), Expect = 1.1e-30 Identity = 83/182 (45.60%), Postives = 93/182 (51.10%), Query Frame = 0
BLAST of CsGy4G000890.1 vs. TAIR 10
Match: AT1G53910.3 (related to AP2 12 ) HSP 1 Score: 127.5 bits (319), Expect = 1.7e-29 Identity = 117/358 (32.68%), Postives = 151/358 (42.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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