CsGy3G034170.1 (mRNA) Cucumber (Gy14) v2.1

Overview
NameCsGy3G034170.1
TypemRNA
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr3: 32962260 .. 32963097 (-)
Sequence length838
RNA-Seq ExpressionCsGy3G034170.1
SyntenyCsGy3G034170.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCATTACCACAGACTAAAGAAAAATGGCAAAACCAAGAATCAGCAAACTCTGAACACAAAGTTTATGAAAGAACTAAGAACAAACTCGATAAACAAATCGAATCACAAAACCCGATTATTTTATTTTATTCGAAAAAAAAACGAAATCAAAGGGCGAAAGATGAACAGAAGCAAAGAATACGATCAAATCAAAGAAGGGAGAAACAAAGGAAGGAGATTTAAAAATAGGAAGAAAAACCGAAAAGCACGTGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAGGAAGAAGGAAACCGAAAACATGGCATAAGATTCAAGAAATGGGGTTAAAGGAAAGAATACCTGAAAGGATAACTTTGAGATTAATTTTGAGGCAAGAACACAGAGACGACAGAGCCACGTTGAGATTTAGGGTTTTAAGTAGCGGAAATTGGTTGGAGAGTAGAAAAGGGCAATGCCCATATTGTCTTCTTGGATTTGTGTTGAAGAAGTTGCTTCTGAATTTACCATTGTTTCAGTTCGTAACTTCATCAAGGAGGTGCTTGAAGTCCAAAGATGAAACAAGAACATTTGGGCACCGTCCAGAACCACACTTTTTTTTCCCCCAAATCGAAATTCAATTACAACAATTGGAGATTACAAGTGACTAATTTCCATTTAAGTATTATAAATGAAACTTTAATATTATTTTGTGATCTTACACTCCATAACAAACTCTCGAACAAGCCACAGAGAAGATCGCAAAAAAGTAAGTTGTAGAAGAAGAATTTGTTTTCCTTCGGCCTTTGGGCAATGCAATAATGAATGGCCGTTTGGGCTCTTAGGCC

mRNA sequence

CCCATTACCACAGACTAAAGAAAAATGGCAAAACCAAGAATCAGCAAACTCTGAACACAAAGTTTATGAAAGAACTAAGAACAAACTCGATAAACAAATCGAATCACAAAACCCGATTATTTTATTTTATTCGAAAAAAAAACGAAATCAAAGGGCGAAAGATGAACAGAAGCAAAGAATACGATCAAATCAAAGAAGGGAGAAACAAAGGAAGGAGATTTAAAAATAGGAAGAAAAACCGAAAAGCACGTGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAGGAAGAAGGAAACCGAAAACATGGCATAAGATTCAAGAAATGGGGTTAAAGGAAAGAATACCTGAAAGGATAACTTTGAGATTAATTTTGAGGCAAGAACACAGAGACGACAGAGCCACGTTGAGATTTAGGGTTTTAAGTAGCGGAAATTGGTTGGAGAGTAGAAAAGGGCAATGCCCATATTGTCTTCTTGGATTTGTGTTGAAGAAGTTGCTTCTGAATTTACCATTGTTTCAGTTCGTAACTTCATCAAGGAGGTGCTTGAAGTCCAAAGATGAAACAAGAACATTTGGGCACCGTCCAGAACCACACTTTTTTTTCCCCCAAATCGAAATTCAATTACAACAATTGGAGATTACAAGTGACTAATTTCCATTTAAGTATTATAAATGAAACTTTAATATTATTTTGTGATCTTACACTCCATAACAAACTCTCGAACAAGCCACAGAGAAGATCGCAAAAAAGTAAGTTGTAGAAGAAGAATTTGTTTTCCTTCGGCCTTTGGGCAATGCAATAATGAATGGCCGTTTGGGCTCTTAGGCC

Coding sequence (CDS)

ATGGGGTTAAAGGAAAGAATACCTGAAAGGATAACTTTGAGATTAATTTTGAGGCAAGAACACAGAGACGACAGAGCCACGTTGAGATTTAGGGTTTTAAGTAGCGGAAATTGGTTGGAGAGTAGAAAAGGGCAATGCCCATATTGTCTTCTTGGATTTGTGTTGAAGAAGTTGCTTCTGAATTTACCATTGTTTCAGTTCGTAACTTCATCAAGGAGGTGCTTGAAGTCCAAAGATGAAACAAGAACATTTGGGCACCGTCCAGAACCACACTTTTTTTTCCCCCAAATCGAAATTCAATTACAACAATTGGAGATTACAAGTGACTAA

Protein sequence

MGLKERIPERITLRLILRQEHRDDRATLRFRVLSSGNWLESRKGQCPYCLLGFVLKKLLLNLPLFQFVTSSRRCLKSKDETRTFGHRPEPHFFFPQIEIQLQQLEITSD*
Homology
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BLAST of CsGy3G034170.1 vs. ExPASy TrEMBL
Match: A0A0A0LF43 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G810515 PE=4 SV=1)

HSP 1 Score: 224 bits (570), Expect = 4.87e-74
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0 

Query: 1   MGLKERIPERITLRLILRQEHRDDRATLRFRVLSSGNWLESRKGQCPYCLLGFVLKKLLL 60
           MGLKERIPERITLRLILRQEHRDDRATLRFRVLSSGNWLESRKGQCPYCLLGFVLKKLLL
Sbjct: 1   MGLKERIPERITLRLILRQEHRDDRATLRFRVLSSGNWLESRKGQCPYCLLGFVLKKLLL 60

Query: 61  NLPLFQFVTSSRRCLKSKDETRTFGHRPEPHFFFPQIEIQLQQLEITSD 109
           NLPLFQFVTSSRRCLKSKDETRTFGHRPEPHFFFPQIEIQLQQLEITSD
Sbjct: 61  NLPLFQFVTSSRRCLKSKDETRTFGHRPEPHFFFPQIEIQLQQLEITSD 109

The following BLAST results are available for this feature:
BLAST of CsGy3G034170.1 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy3G034170.1 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy3G034170.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LF434.87e-74100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G810515 PE=4 SV=1[more]
BLAST of CsGy3G034170.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CsGy3G034170CsGy3G034170gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy3G034170.1.exon1CsGy3G034170.1.exon1exon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy3G034170.1.utr3p1CsGy3G034170.1.utr3p1three_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.CsGy3G034170.1cds.CsGy3G034170.1CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy3G034170.1.utr5p1CsGy3G034170.1.utr5p1five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CsGy3G034170.1CsGy3G034170.1-proteinpolypeptide