CsGy3G026165.1 (mRNA) Cucumber (Gy14) v2.1

Overview
NameCsGy3G026165.1
TypemRNA
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr3: 26950093 .. 26953134 (+)
Sequence length183
RNA-Seq ExpressionCsGy3G026165.1
SyntenyCsGy3G026165.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTACTGCTTTTTTAATTCACTTTGCTTCGTGCGGAACGGTGTCTCTGGAATCAAAAGCTATTGGGGGTGTTTATGCATCAACCTCTTTATATGAATATAGAGCTATCTCGATCCTCCAATAGAAGACTGCTGTTCTTTACAACTCACTCAGAATAATGTATGCTCTGTTCTTTACAAATCATAGTTTGAATGCAAGATTAAATATTATTAATTATTCAGATCTGTACGAGTTCACTTTATATATTTCATTGAATCATATCTTCAATGCGATGGTGGTTTTTTTTATACATAGGCACGCTTCATAATAGTTTATGGAATACATTTATTTCCAGTTCATTTAAGATCCCTTGTTAAAGATTGTGATTTGTTGCTTTGAAGCTGTTCATTTTTCGGCAAGACATTTGGATCCTTGAAGTTTAGATCATGAATCCTCTCTGGCCTTGTTCGATCATTCCTTCAGTAGTTTTTGGAGATGAAATTTTGTTTTAATGTATTGTTTTGTGTTTTGATTGCTATTCCTGTGGTTGTATTTGTTAGTGGTTGTCTGCTTGTTAGTTTCATTTTCAATTTTCTATTTTAGTTTCCAGTTCAGATTCGGGTTAGTCGCTTTTGTATCCATATTCTGGCATCTTTGGGTTGGGTTTTTGTTGTCTTGTTGTCTCCTAATCGCTATTCCATTTCAATGTATCAATGAAAATCTCATAATCGCTATTCCATTCCACATGTTATGAATCTTACTGAAGAAAATTATACAGTCATGAAAATTACTCAATGGTTCTTGTAAAATTTTCAGTCTAACTTAGAAATCATATCTCAAAAAATATGTATTTGATAAGAACTGCCGCTAATATAGTGCATCTTTGACTAACTGAATCATGCCTCATTATTTTTCTTAATCAATGTACTAGGAAGTTTGCATAATCTCTGGTCATGTTTAAACTGCAGTATTTTGGAATAAAAAGTATTTTTGTGTTCATTTCCTTTAAGTTTCACTTAATCTTTCCATACTCTTTGGTGTGTTGCAGAAAGTTATCATTCTGTACCTTGGAATGTTGGACCGGAGAAACATGGACGTGTTCTTGGTTATGGGGTAGGTGTTACCCCTTCTGAGTTTGGATCATCGTCTAAGGTATGCGATCTTGAGCGTCACCTTAATGAGTCTGAAAAACATCTTAACGAATCTAAACGACATAGAAAAACTGAGGTACAAACACTCCAGGATAGAATTAACGAATTAGAAAACCGTTTTGAGGACAGATTCCAAACTATGATGGCAGAGATGCACAAACATGTTTCTAGTTGATTGAGTGCCGTAGTCTAATGTTATAGAACATTTTGAGATTGCAATTTGGATGTTGTAGATTGTCATTCTTATACATGGATCAGAATTCTTATCTCCATGAATCAGAATTCTTTCTGCTGTTTTTGTTCCTCCTTGGCGGCAGCAGCAGCTACAAATGACCTTATGAAGCTTTTCCTTTAGATTCTCTTCATAGTCTTCATAGTCTTCATAGTCTTCATAGTCTTGCTGTTATTCTTAGTTTTTGATGGCCAAGCCAGTTCTTTGTTTAAGCCCTTTATGTCTCTTTTATACGGATTGCTTTCTTTTGTACTCTGCTTTATGCCTTTTGTTTTCTTTATACTTTGAGCTTTAGTTTCATACCATTTTCTTAATGGGTTCAAAAAAAAAAAAAAAAAAAATTACTGCCTATTCTGTCAAGTTTCTCTTACAAACATTATTTGTACTTGTAGATTAACTGTCATAAGAAACTAAACCACCTCACTGAGGCTAATAATGTAAGCTTCAATATTACTATCAAGAGCCTAATGTTTCTGAAATTGTTTTTGAGGTCTATCATTTACATTTTTACATGGACCTAATTCTCATTGTGTTGTGGAAATTTAAGGATCTAAGAACTGCTCCTGACTGGAGAATAGAATTTTGGAGAATTTTCTACTTTGATGGATAGGATTGGCTGATTGGTAAGCTTGGTAGTTGGTTATATCACTCCTAAAAGAATAAGTTTGGATTTCAGAAAGTTGATGGAATTCCGAATTGCATGAAAAAAGAAGTTATAGAGGTTGTGGCAATTGGCAGGAAGACACTTCTTACACTCTTGTCTCCCAAGCTTGCCACAGCTCTGAAGGATTGATGAATTGGCAAGATTTCAATACCAGAAGGCAGGAAGTACTATGTAAGGACCCAACACCTGCCACTCAGTAAAATCCCAACAATGCAATAGAGAAACAGAGACAGTACTCTGTATTTATATATAGATATAGTTATAATAGAAGACAATGTTCATGTACTTTCCTCTAACAACAAAAATACCACACTAGACAATATCAACAAGAAGAAAATAGTAAAGACAAGGATAACACTCCAGCTAATTTGAGAATGCTGGCCTTTTCCTCCAAAAGCTGCTGCTGTTCTTTTCTCAATGATGATGCCTTCAGTAATCCCAAAAACATTCCCTTATATACTCCCATACCTTCCAGTGGGTCCCACATCAGAATGTTCCATAAACCTAATAGGTTAAGCTACCCCTGGTTCTTATCTTTTCTGCCCCTACGTTTGTATGTGTGAATAATAGGGGGTCTAACATACTAACCAGCCCAAACCAATTTCTCGTTGGTAGGCTAGGTACCAGGAGTTCACTTCTATTCCTGTGAATTGTTGTGGCCATGGCGCCCCAAGGAATCTCAAGCACTTGATGAGAACAAACTCAAGTATTAACATTAACGGTATAGGGTTTGCAGCGATAAACTTTTATCTGAAAACAAATAATGTATATTATTTACTGTTAAAATAAAAGCCAAGGTTAAGGTTGCATATAAGGTCACCTCCACCTAGATTTGGAATATATAGAAATCGTTATTGCGTCTTCTAATATTGGTCTATAGCATGAGGATGTGGAAGTTGTGAGAAGAGAATGAAATATCATCTTGTGGTTAAATATTTACTTTTTGATATTCTGTGTATGTGATTCTGTGGCAGCTTGATTGTTTTACTTTCCCCTATTATGCAGGCTCGTTAG

mRNA sequence

ATGTTTACTGCTTTTTTAATTCACTTTGCTTCGTGCGGAACGGTGTCTCTGGAATCAAAAGCTATTGGGGAAAGTTATCATTCTGTACCTTGGAATGTTGGACCGGAGAAACATGGACGTGTTCTTGGTTATGGGGTAGGTGTTACCCCTTCTGAGTTTGGATCATCGTCTAAGGCTCGTTAG

Coding sequence (CDS)

ATGTTTACTGCTTTTTTAATTCACTTTGCTTCGTGCGGAACGGTGTCTCTGGAATCAAAAGCTATTGGGGAAAGTTATCATTCTGTACCTTGGAATGTTGGACCGGAGAAACATGGACGTGTTCTTGGTTATGGGGTAGGTGTTACCCCTTCTGAGTTTGGATCATCGTCTAAGGCTCGTTAG

Protein sequence

MFTAFLIHFASCGTVSLESKAIGESYHSVPWNVGPEKHGRVLGYGVGVTPSEFGSSSKAR*
Homology
[Close]
BLAST of CsGy3G026165.1 vs. NCBI nr
Match: KAE8650873.1 (hypothetical protein Csa_002260 [Cucumis sativus])

HSP 1 Score: 125 bits (313), Expect = 5.01e-36
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0 

Query: 1  MFTAFLIHFASCGTVSLESKAIGESYHSVPWNVGPEKHGRVLGYGVGVTPSEFGSSSKAR 60
          MFTAFLIHFASCGTVSLESKAIGESYHSVPWNVGPEKHGRVLGYGVGVTPSEFGSSSKAR
Sbjct: 1  MFTAFLIHFASCGTVSLESKAIGESYHSVPWNVGPEKHGRVLGYGVGVTPSEFGSSSKAR 60

The following BLAST results are available for this feature:
BLAST of CsGy3G026165.1 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy3G026165.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8650873.15.01e-36100.00hypothetical protein Csa_002260 [Cucumis sativus][more]
BLAST of CsGy3G026165.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsGy3G026165.1 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CsGy3G026165CsGy3G026165gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy3G026165.1.exon1CsGy3G026165.1.exon1exon
CsGy3G026165.1.exon2CsGy3G026165.1.exon2exon
CsGy3G026165.1.exon3CsGy3G026165.1.exon3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.CsGy3G026165.1cds.CsGy3G026165.1CDS
cds.CsGy3G026165.1cds.CsGy3G026165.1_2CDS
cds.CsGy3G026165.1cds.CsGy3G026165.1_3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CsGy3G026165.1CsGy3G026165.1-proteinpolypeptide