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CsGy2G020320.2 (mRNA) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGTTTTGGTGCTCTAATAATTTTTAAATCTCTCTGTTGCAATTAAACTAATTCATTTCCTTCTTCTCTCCTCTTTTTTTAATGTCAATAATCTCATTTCTCAACTGTAGAGGATCACCAGGGATGTACCGCCATTCTTATTATATTCTGTAATTATTGCATCCCACCATTAGTCTCACAGCTTCTTCACTGATTGCTCCGGCAAACCTTTTTTATTTATTTATATTTTTTTTTTCTTCTTCTTCTTCTTCTTCCTCTTGAATTGCTGATAATCAGAAAGATATGAAGATTCAGTGTGATGTTTGTGAAAAAGGAGATGCGGTGGTGTTCTGCACGGCGGATGAGGCGGCGCTCTGTAATCTTTGTGATCACCGTGTCCACCATGCTAATAAGCTTGCTTCGAAGCATCGACGGTTTTCTCTGCTACGTCCTGATGCAGGGGAGGCTCCTGTTTGCGATGTGTGTAAGGTATTTTGCCAAGATCTGATTTTTGTTTATTTTCGTGGATATGGGGTTTGCTCTGTTTTTGGTTTTTTTTCTTCTTATGTGGGGCTTTTGAATCTGGTTTTGTAGGAGCGGCGAGGGTTTTTGTTTTGTCAACAAGATAGAGCGATTCTGTGTAGAGAGTGCGATGATCCAATTCATTCGGCTAATGAACTCACTAAGAAGCACGATAGGTTTCTTTTAACTGGGATTAAGCTTTCCGCCAGTGCTGCTCTGTACGCGCCATCTCCATCCGGCGAGAAACCAATTGGGAGTGGTGGTTGTGTTGTTTCTGCATCTAAGTCAAAGGGATCTGTCAAGAAAGTGGCTGCGGTTTCCAAGGCCCCAACGATATGCACTCCAAATGTTTGTGTTAATGCCCCAACGAACATAACTCCAGCAGCAGTAGTGAACAAGGGAGGTGGAGGTCAGATTGCGACCGGCGGAGGTGGATCGGCGAGTAGCATATCGGAGTATTTGATGGAGACGCTTCCTGGGTGGCACTTTGAAGACTTTCTTGATTCCTCTGTCTCTCCTCCTTTTGTGGAGGTTTGTTGGTCACTATTACTGTTACTATTACTATTTGTGTGTGAAGTTGATCATCAGAAAGTTTGAGGAATGTTTTTATGTTTACTCTTTTTTGCAGTTTGATGATGGGATAGGATTTCCATTTGTGGAAGGTGATTTGAATGGTTGTTTTTCATCATCGGAACGTATAGAGCTTTGGGTCCCTCAGGGGCCACCACCGGCGCCGTATAATTCAGGATTAATGATGAATAATGGATTGAAGGACACAAAGGATTTGGGAGTAAATTCATCAAAAGTCAATAGATCAGTGTGGACAGATGATGGTTTCACTGTGCCACAGATCACAAGTACAGCCCCATCTCCAGGCTTTAAGAGATCCAGACCTTTTTGGTAAAAATTGGCATAACAATCAATAACCAAATACACTTCCATTTCCAATTTCCAACCCTTTATTCCTTTCTTTCTCAAAAAAGAAAAAGAAAACCCTCGTTTCTTCTCCCCGTTTTTCTCCTTCTGGCTTCTTTTACTTTTTGTTTCATCTGTAATTTAATGCCTTTTTCTTTTAAATTTTGTTTAGGTTTCACCTCATGTACTTTTAATAGGTACATTCTTCTTCTTGGGGTTTCTGTTAGTTCTTTTCCTGAAAAAAAAAAATGTTTCAGCTGTAATATAATGGCCTCTTCTTCTTCTTCTTTTCTGGGGTTCTTTTACTTTAAGTTCTGTCATATTTGTAGTTCAATCCGGTTTTTCTTTTCTCTTTTTCTTTTTTTGCTTCTACTTTTTTGTCTGAAGTTGCACCTGTATATCATCCTTGACTAAACTTCTTCTTCTGTTGTTGGTTTTTGTTTAGTTCTTCAATAGGGCGTGGGTCGTTCTATAAAACCCAACCATTTGTCATTGTAAATACCTTCCAATGAGTTTTTGGAGTGAATAATGGCTTGAACTTGAGTGAGTAAAAAGTTCTTTTATTTTTTTGTTGTGGATGGGGAGGGGGTTAAGAACTTAAGAGGGATATCTTGTTGGTTTTCTTTGTGTAGTGGAAGGCAGTGGATTCCCAAGCTTGCAGAGTTGGGCAACAATGGCGGCTTTCTGTTAATTATCTGTTTAACTCATATAATAATATATAATATATATTTTGAGTTTGTTTCTTCC GGTTTTGGTGCTCTAATAATTTTTAAATCTCTCTGTTGCAATTAAACTAATTCATTTCCTTCTTCTCTCCTCTTTTTTTAATGTCAATAATCTCATTTCTCAACTGTAGAGGATCACCAGGGATGTACCGCCATTCTTATTATATTCTGTAATTATTGCATCCCACCATTAGTCTCACAGCTTCTTCACTGATTGCTCCGGCAAACCTTTTTTATTTATTTATATTTTTTTTTTCTTCTTCTTCTTCTTCTTCCTCTTGAATTGCTGATAATCAGAAAGATATGAAGATTCAGTGTGATGTTTGTGAAAAAGGAGATGCGGTGGTGTTCTGCACGGCGGATGAGGCGGCGCTCTGTAATCTTTGTGATCACCGTGTCCACCATGCTAATAAGCTTGCTTCGAAGCATCGACGGTTTTCTCTGCTACGTCCTGATGCAGGGGAGGCTCCTGTTTGCGATGTGTGTAAGGAGCGGCGAGGGTTTTTGTTTTGTCAACAAGATAGAGCGATTCTGTGTAGAGAGTGCGATGATCCAATTCATTCGGCTAATGAACTCACTAAGAAGCACGATAGGTTTCTTTTAACTGGGATTAAGCTTTCCGCCAGTGCTGCTCTGTACGCGCCATCTCCATCCGGCGAGAAACCAATTGGGAGTGGTGGTTGTGTTGTTTCTGCATCTAAGTCAAAGGGATCTGTCAAGAAAGTGGCTGCGGTTTCCAAGGCCCCAACGATATGCACTCCAAATGTTTGTGTTAATGCCCCAACGAACATAACTCCAGCAGCAGTAGTGAACAAGGGAGGTGGAGGTCAGATTGCGACCGGCGGAGGTGGATCGGCGAGTAGCATATCGGAGTATTTGATGGAGACGCTTCCTGGGTGGCACTTTGAAGACTTTCTTGATTCCTCTGTCTCTCCTCCTTTTGTGGAGTTTGATGATGGGATAGGATTTCCATTTGTGGAAGGTGATTTGAATGGTTGTTTTTCATCATCGGAACGTATAGAGCTTTGGGTCCCTCAGGGGCCACCACCGGCGCCGTATAATTCAGGATTAATGATGAATAATGGATTGAAGGACACAAAGGATTTGGGAGTAAATTCATCAAAAGTCAATAGATCAGTGTGGACAGATGATGGTTTCACTGTGCCACAGATCACAAGTACAGCCCCATCTCCAGGCTTTAAGAGATCCAGACCTTTTTGGTAAAAATTGGCATAACAATCAATAACCAAATACACTTCCATTTCCAATTTCCAACCCTTTATTCCTTTCTTTCTCAAAAAAGAAAAAGAAAACCCTCGTTTCTTCTCCCCGTTTTTCTCCTTCTGGCTTCTTTTACTTTTTGTTTCATCTGTAATTTAATGCCTTTTTCTTTTAAATTTTGTTTAGGTTTCACCTCATGTACTTTTAATAGGTACATTCTTCTTCTTGGGGTTTCTGTTAGTTCTTTTCCTGAAAAAAAAAAATGTTTCAGCTGTAATATAATGGCCTCTTCTTCTTCTTCTTTTCTGGGGTTCTTTTACTTTAAGTTCTGTCATATTTGTAGTTCAATCCGGTTTTTCTTTTCTCTTTTTCTTTTTTTGCTTCTACTTTTTTGTCTGAAGTTGCACCTGTATATCATCCTTGACTAAACTTCTTCTTCTGTTGTTGGTTTTTGTTTAGTTCTTCAATAGGGCGTGGGTCGTTCTATAAAACCCAACCATTTGTCATTGTAAATACCTTCCAATGAGTTTTTGGAGTGAATAATGGCTTGAACTTGAGTGAGTAAAAAGTTCTTTTATTTTTTTGTTGTGGATGGGGAGGGGGTTAAGAACTTAAGAGGGATATCTTGTTGGTTTTCTTTGTGTAGTGGAAGGCAGTGGATTCCCAAGCTTGCAGAGTTGGGCAACAATGGCGGCTTTCTGTTAATTATCTGTTTAACTCATATAATAATATATAATATATATTTTGAGTTTGTTTCTTCC ATGAAGATTCAGTGTGATGTTTGTGAAAAAGGAGATGCGGTGGTGTTCTGCACGGCGGATGAGGCGGCGCTCTGTAATCTTTGTGATCACCGTGTCCACCATGCTAATAAGCTTGCTTCGAAGCATCGACGGTTTTCTCTGCTACGTCCTGATGCAGGGGAGGCTCCTGTTTGCGATGTGTGTAAGGAGCGGCGAGGGTTTTTGTTTTGTCAACAAGATAGAGCGATTCTGTGTAGAGAGTGCGATGATCCAATTCATTCGGCTAATGAACTCACTAAGAAGCACGATAGGTTTCTTTTAACTGGGATTAAGCTTTCCGCCAGTGCTGCTCTGTACGCGCCATCTCCATCCGGCGAGAAACCAATTGGGAGTGGTGGTTGTGTTGTTTCTGCATCTAAGTCAAAGGGATCTGTCAAGAAAGTGGCTGCGGTTTCCAAGGCCCCAACGATATGCACTCCAAATGTTTGTGTTAATGCCCCAACGAACATAACTCCAGCAGCAGTAGTGAACAAGGGAGGTGGAGGTCAGATTGCGACCGGCGGAGGTGGATCGGCGAGTAGCATATCGGAGTATTTGATGGAGACGCTTCCTGGGTGGCACTTTGAAGACTTTCTTGATTCCTCTGTCTCTCCTCCTTTTGTGGAGTTTGATGATGGGATAGGATTTCCATTTGTGGAAGGTGATTTGAATGGTTGTTTTTCATCATCGGAACGTATAGAGCTTTGGGTCCCTCAGGGGCCACCACCGGCGCCGTATAATTCAGGATTAATGATGAATAATGGATTGAAGGACACAAAGGATTTGGGAGTAAATTCATCAAAAGTCAATAGATCAGTGTGGACAGATGATGGTTTCACTGTGCCACAGATCACAAGTACAGCCCCATCTCCAGGCTTTAAGAGATCCAGACCTTTTTGGTAA MKIQCDVCEKGDAVVFCTADEAALCNLCDHRVHHANKLASKHRRFSLLRPDAGEAPVCDVCKERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGIKLSASAALYAPSPSGEKPIGSGGCVVSASKSKGSVKKVAAVSKAPTICTPNVCVNAPTNITPAAVVNKGGGGQIATGGGGSASSISEYLMETLPGWHFEDFLDSSVSPPFVEFDDGIGFPFVEGDLNGCFSSSERIELWVPQGPPPAPYNSGLMMNNGLKDTKDLGVNSSKVNRSVWTDDGFTVPQITSTAPSPGFKRSRPFW* Homology
BLAST of CsGy2G020320.2 vs. ExPASy Swiss-Prot
Match: Q9LQZ7 (B-box zinc finger protein 21 OS=Arabidopsis thaliana OX=3702 GN=BBX21 PE=1 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 1.4e-61 Identity = 148/347 (42.65%), Postives = 199/347 (57.35%), Query Frame = 0
BLAST of CsGy2G020320.2 vs. ExPASy Swiss-Prot
Match: Q0IGM7 (B-box zinc finger protein 20 OS=Arabidopsis thaliana OX=3702 GN=BBX20 PE=1 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 1.5e-47 Identity = 111/220 (50.45%), Postives = 130/220 (59.09%), Query Frame = 0
BLAST of CsGy2G020320.2 vs. ExPASy Swiss-Prot
Match: Q9SYM2 (B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2) HSP 1 Score: 134.4 bits (337), Expect = 2.1e-30 Identity = 63/115 (54.78%), Postives = 75/115 (65.22%), Query Frame = 0
BLAST of CsGy2G020320.2 vs. ExPASy Swiss-Prot
Match: Q96288 (B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 4.0e-29 Identity = 67/153 (43.79%), Postives = 92/153 (60.13%), Query Frame = 0
BLAST of CsGy2G020320.2 vs. ExPASy Swiss-Prot
Match: Q9SID1 (B-box zinc finger protein 25 OS=Arabidopsis thaliana OX=3702 GN=BBX25 PE=1 SV=2) HSP 1 Score: 129.0 bits (323), Expect = 9.0e-29 Identity = 59/109 (54.13%), Postives = 76/109 (69.72%), Query Frame = 0
BLAST of CsGy2G020320.2 vs. NCBI nr
Match: XP_004152665.1 (B-box zinc finger protein 20 [Cucumis sativus] >KGN62650.1 hypothetical protein Csa_022601 [Cucumis sativus]) HSP 1 Score: 630 bits (1626), Expect = 3.25e-228 Identity = 305/306 (99.67%), Postives = 305/306 (99.67%), Query Frame = 0
BLAST of CsGy2G020320.2 vs. NCBI nr
Match: XP_008444771.1 (PREDICTED: B-box zinc finger protein 20-like [Cucumis melo] >KAA0065189.1 B-box zinc finger protein 20-like [Cucumis melo var. makuwa]) HSP 1 Score: 594 bits (1532), Expect = 6.70e-214 Identity = 292/306 (95.42%), Postives = 295/306 (96.41%), Query Frame = 0
BLAST of CsGy2G020320.2 vs. NCBI nr
Match: XP_038885493.1 (B-box zinc finger protein 20-like [Benincasa hispida]) HSP 1 Score: 574 bits (1480), Expect = 5.87e-206 Identity = 282/307 (91.86%), Postives = 289/307 (94.14%), Query Frame = 0
BLAST of CsGy2G020320.2 vs. NCBI nr
Match: XP_022144185.1 (B-box zinc finger protein 21-like isoform X1 [Momordica charantia]) HSP 1 Score: 512 bits (1318), Expect = 3.93e-181 Identity = 258/315 (81.90%), Postives = 270/315 (85.71%), Query Frame = 0
BLAST of CsGy2G020320.2 vs. NCBI nr
Match: XP_022144186.1 (B-box zinc finger protein 21-like isoform X2 [Momordica charantia]) HSP 1 Score: 511 bits (1317), Expect = 5.19e-181 Identity = 258/314 (82.17%), Postives = 270/314 (85.99%), Query Frame = 0
BLAST of CsGy2G020320.2 vs. ExPASy TrEMBL
Match: A0A0A0LL53 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G365080 PE=4 SV=1) HSP 1 Score: 630 bits (1626), Expect = 1.57e-228 Identity = 305/306 (99.67%), Postives = 305/306 (99.67%), Query Frame = 0
BLAST of CsGy2G020320.2 vs. ExPASy TrEMBL
Match: A0A5A7VI96 (B-box zinc finger protein 20-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005260 PE=4 SV=1) HSP 1 Score: 594 bits (1532), Expect = 3.24e-214 Identity = 292/306 (95.42%), Postives = 295/306 (96.41%), Query Frame = 0
BLAST of CsGy2G020320.2 vs. ExPASy TrEMBL
Match: A0A1S3BBW0 (B-box zinc finger protein 20-like OS=Cucumis melo OX=3656 GN=LOC103488017 PE=4 SV=1) HSP 1 Score: 594 bits (1532), Expect = 3.24e-214 Identity = 292/306 (95.42%), Postives = 295/306 (96.41%), Query Frame = 0
BLAST of CsGy2G020320.2 vs. ExPASy TrEMBL
Match: A0A6J1CQY0 (B-box zinc finger protein 21-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013937 PE=4 SV=1) HSP 1 Score: 512 bits (1318), Expect = 1.90e-181 Identity = 258/315 (81.90%), Postives = 270/315 (85.71%), Query Frame = 0
BLAST of CsGy2G020320.2 vs. ExPASy TrEMBL
Match: A0A6J1CSK3 (B-box zinc finger protein 21-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111013937 PE=4 SV=1) HSP 1 Score: 511 bits (1317), Expect = 2.51e-181 Identity = 258/314 (82.17%), Postives = 270/314 (85.99%), Query Frame = 0
BLAST of CsGy2G020320.2 vs. TAIR 10
Match: AT1G75540.1 (salt tolerance homolog2 ) HSP 1 Score: 238.0 bits (606), Expect = 9.8e-63 Identity = 148/347 (42.65%), Postives = 199/347 (57.35%), Query Frame = 0
BLAST of CsGy2G020320.2 vs. TAIR 10
Match: AT4G39070.1 (B-box zinc finger family protein ) HSP 1 Score: 191.4 bits (485), Expect = 1.1e-48 Identity = 111/220 (50.45%), Postives = 130/220 (59.09%), Query Frame = 0
BLAST of CsGy2G020320.2 vs. TAIR 10
Match: AT1G78600.1 (light-regulated zinc finger protein 1 ) HSP 1 Score: 134.4 bits (337), Expect = 1.5e-31 Identity = 63/115 (54.78%), Postives = 75/115 (65.22%), Query Frame = 0
BLAST of CsGy2G020320.2 vs. TAIR 10
Match: AT1G78600.2 (light-regulated zinc finger protein 1 ) HSP 1 Score: 134.4 bits (337), Expect = 1.5e-31 Identity = 63/115 (54.78%), Postives = 75/115 (65.22%), Query Frame = 0
BLAST of CsGy2G020320.2 vs. TAIR 10
Match: AT1G06040.2 (B-box zinc finger family protein ) HSP 1 Score: 130.2 bits (326), Expect = 2.9e-30 Identity = 67/153 (43.79%), Postives = 92/153 (60.13%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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