CsGy2G019495.1 (mRNA) Cucumber (Gy14) v2.1

Overview
NameCsGy2G019495.1
TypemRNA
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr2: 28847030 .. 28847215 (+)
Sequence length186
RNA-Seq ExpressionCsGy2G019495.1
SyntenyCsGy2G019495.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTTTAGAAATAAAAGCGCACATCAGGTTGTATATGGGCCTTTACGAAAGCAACTTGTTTGGGCTCCGTCCATCAAAGTTCAACATTCCAGCACGTGGATATATTCTCCACCGGCCACTATCGCACGTGCCTATTCGATATTCCGGCGAGCCACCGATGGCGATGGCGCCGACCAACGTTTAG

mRNA sequence

ATGACTTTAGAAATAAAAGCGCACATCAGGTTGTATATGGGCCTTTACGAAAGCAACTTGTTTGGGCTCCGTCCATCAAAGTTCAACATTCCAGCACGTGGATATATTCTCCACCGGCCACTATCGCACGTGCCTATTCGATATTCCGGCGAGCCACCGATGGCGATGGCGCCGACCAACGTTTAG

Coding sequence (CDS)

ATGACTTTAGAAATAAAAGCGCACATCAGGTTGTATATGGGCCTTTACGAAAGCAACTTGTTTGGGCTCCGTCCATCAAAGTTCAACATTCCAGCACGTGGATATATTCTCCACCGGCCACTATCGCACGTGCCTATTCGATATTCCGGCGAGCCACCGATGGCGATGGCGCCGACCAACGTTTAG

Protein sequence

MTLEIKAHIRLYMGLYESNLFGLRPSKFNIPARGYILHRPLSHVPIRYSGEPPMAMAPTNV*
Homology
[Close]
BLAST of CsGy2G019495.1 vs. NCBI nr
Match: KGN62562.1 (hypothetical protein Csa_021887 [Cucumis sativus])

HSP 1 Score: 105 bits (263), Expect = 1.72e-28
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0 

Query: 13 MGLYESNLFGLRPSKFNIPARGYILHRPLSHVPIRYSGEPPMAMAPTNV 61
          MGLYESNLFGLRPSKFNIPARGYILHRPLSHVPIRYSGEPPMAMAPTNV
Sbjct: 1  MGLYESNLFGLRPSKFNIPARGYILHRPLSHVPIRYSGEPPMAMAPTNV 49

[Close]
BLAST of CsGy2G019495.1 vs. ExPASy TrEMBL
Match: A0A0A0LP78 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360790 PE=4 SV=1)

HSP 1 Score: 105 bits (263), Expect = 8.32e-29
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0 

Query: 13 MGLYESNLFGLRPSKFNIPARGYILHRPLSHVPIRYSGEPPMAMAPTNV 61
          MGLYESNLFGLRPSKFNIPARGYILHRPLSHVPIRYSGEPPMAMAPTNV
Sbjct: 1  MGLYESNLFGLRPSKFNIPARGYILHRPLSHVPIRYSGEPPMAMAPTNV 49

The following BLAST results are available for this feature:
BLAST of CsGy2G019495.1 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy2G019495.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN62562.11.72e-28100.00hypothetical protein Csa_021887 [Cucumis sativus][more]
BLAST of CsGy2G019495.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LP788.32e-29100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360790 PE=4 SV=1[more]
BLAST of CsGy2G019495.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CsGy2G019495CsGy2G019495gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy2G019495.1.exon1CsGy2G019495.1.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.CsGy2G019495.1cds.CsGy2G019495.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CsGy2G019495.1CsGy2G019495.1-proteinpolypeptide