CsGy2G005160.2 (mRNA) Cucumber (Gy14) v2.1

Overview
NameCsGy2G005160.2
TypemRNA
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr2: 3514326 .. 3514556 (+)
Sequence length231
RNA-Seq ExpressionCsGy2G005160.2
SyntenyCsGy2G005160.2
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCCACTGTTTCATCTATACAATTGAATCCAAAAACCCTTTTTTTGGGTTATTTTCTCTTCACTGGCGACGGCGATTCCATCGTCTCTCTCGTCATTGCCGACGGCGACGGCCACTGCCTCCGTCATCCTCTCTTCAGCTTACCCGTCTGCCATTCGCCCTTCCCTTTGCTCAAAGATTTCTCACTCACTCATTCTCTCTTCAGTTAGATCAGTTTGCCGAAGCTTAG

mRNA sequence

ATGACCCACTGTTTCATCTATACAATTGAATCCAAAAACCCTTTTTTTGGGTTATTTTCTCTTCACTGGCGACGGCGATTCCATCGTCTCTCTCGTCATTGCCGACGGCGACGGCCACTGCCTCCGTCATCCTCTCTTCAGCTTACCCGTCTGCCATTCGCCCTTCCCTTTGCTCAAAGATTTCTCACTCACTCATTCTCTCTTCAGTTAGATCAGTTTGCCGAAGCTTAG

Coding sequence (CDS)

ATGACCCACTGTTTCATCTATACAATTGAATCCAAAAACCCTTTTTTTGGGTTATTTTCTCTTCACTGGCGACGGCGATTCCATCGTCTCTCTCGTCATTGCCGACGGCGACGGCCACTGCCTCCGTCATCCTCTCTTCAGCTTACCCGTCTGCCATTCGCCCTTCCCTTTGCTCAAAGATTTCTCACTCACTCATTCTCTCTTCAGTTAGATCAGTTTGCCGAAGCTTAG

Protein sequence

MTHCFIYTIESKNPFFGLFSLHWRRRFHRLSRHCRRRRPLPPSSSLQLTRLPFALPFAQRFLTHSFSLQLDQFAEA*
Homology
[Close]
BLAST of CsGy2G005160.2 vs. NCBI nr
Match: KGN61030.1 (hypothetical protein Csa_021258 [Cucumis sativus])

HSP 1 Score: 159 bits (401), Expect = 5.65e-49
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0 

Query: 1  MTHCFIYTIESKNPFFGLFSLHWRRRFHRLSRHCRRRRPLPPSSSLQLTRLPFALPFAQR 60
          MTHCFIYTIESKNPFFGLFSLHWRRRFHRLSRHCRRRRPLPPSSSLQLTRLPFALPFAQR
Sbjct: 1  MTHCFIYTIESKNPFFGLFSLHWRRRFHRLSRHCRRRRPLPPSSSLQLTRLPFALPFAQR 60

Query: 61 FLTHSFSLQLDQFAEA 76
          FLTHSFSLQLDQFAEA
Sbjct: 61 FLTHSFSLQLDQFAEA 76

[Close]
BLAST of CsGy2G005160.2 vs. ExPASy TrEMBL
Match: A0A0A0LGK7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034825 PE=4 SV=1)

HSP 1 Score: 159 bits (401), Expect = 2.74e-49
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0 

Query: 1  MTHCFIYTIESKNPFFGLFSLHWRRRFHRLSRHCRRRRPLPPSSSLQLTRLPFALPFAQR 60
          MTHCFIYTIESKNPFFGLFSLHWRRRFHRLSRHCRRRRPLPPSSSLQLTRLPFALPFAQR
Sbjct: 1  MTHCFIYTIESKNPFFGLFSLHWRRRFHRLSRHCRRRRPLPPSSSLQLTRLPFALPFAQR 60

Query: 61 FLTHSFSLQLDQFAEA 76
          FLTHSFSLQLDQFAEA
Sbjct: 61 FLTHSFSLQLDQFAEA 76

The following BLAST results are available for this feature:
BLAST of CsGy2G005160.2 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy2G005160.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61030.15.65e-49100.00hypothetical protein Csa_021258 [Cucumis sativus][more]
BLAST of CsGy2G005160.2 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LGK72.74e-49100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034825 PE=4 SV=1[more]
BLAST of CsGy2G005160.2 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CsGy2G005160CsGy2G005160gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy2G005160.2.exon1CsGy2G005160.2.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.CsGy2G005160.2cds.CsGy2G005160.2CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CsGy2G005160.2CsGy2G005160.2-proteinpolypeptide