CsGy1G021605.1 (mRNA) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G021605.1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Cupin type-1 domain-containing protein
Location	Gy14Chr1: 20309441 .. 20310215 (+)
Sequence length	540
RNA-Seq Expression	CsGy1G021605.1
Synteny	CsGy1G021605.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCGTAAGACTAAGGCGAAGCCACACGCTCTCGTTTGCGTTCCTAAGAAACTAGGGTCCACCTTCCAACGAAGCATGTAATTATTGTCGTTTTGCACGTTTTCTTTCCGACCGTTGGAACGACTTTCCGTTTATGTTGACGGAGTTACAAAACGAACAGTGGGTCAAAAAGTCCGTGGCTTCACGGCAACTTATTACCATATTACCCTCTGAACAATAAGTCCTGACTCGCATTTTTTAGTCATTTTACATTCATCCATCTAAAACTTGGGCATTAATACTCATTTGAAGCTCCGTTGAGTTCTTGGGCGTCCAATACAATACAACGATGGAAGGCCAGCAGGTTCTGGAGAATTTCGATTCTCTCTGGTTCTTCGCCACCGTATTCTCCAACAGAACGCCACCGGTCGTTGGAAAACCCATTCAAAACGACTTCGTTGGTTCTCTCGGAGAAGAAATTGCGACACCCATCACTCGAAATGAGGAAAATAATGTTTGTGAAGCGAAGGAGATGGAAACCGAGGAGAGGGAAGAGAAGAGGAGAAAAAACAGAGGAGGGAGGAGTTGGGGTTTGGAACAGAGGAAAAAATTTATTGTTGGAGAGATAGATCTGAGTTATGCTGTGAAGGAGATTTGTGAATGTTGGTCTTTTGAAGAGATGAGAATTGGAGGTGGGGAGAAGACGAAGAAGATGCCATCATTTGAAGATAGTATGGCCATGAAAGAGCATATCAGATCTTGGGCTTATGCAGTGGCTTGTACTGTTAGATGA

mRNA sequence

ATGGAGCGTAAGACTAAGGCGAAGCCACACGCTCTCGTTTGCGTTCCTAAGAAACTAGGCTCCGTTGAGTTCTTGGGCGTCCAATACAATACAACGATGGAAGGCCAGCAGGTTCTGGAGAATTTCGATTCTCTCTGGTTCTTCGCCACCGTATTCTCCAACAGAACGCCACCGGTCGTTGGAAAACCCATTCAAAACGACTTCGTTGGTTCTCTCGGAGAAGAAATTGCGACACCCATCACTCGAAATGAGGAAAATAATGTTTGTGAAGCGAAGGAGATGGAAACCGAGGAGAGGGAAGAGAAGAGGAGAAAAAACAGAGGAGGGAGGAGTTGGGGTTTGGAACAGAGGAAAAAATTTATTGTTGGAGAGATAGATCTGAGTTATGCTGTGAAGGAGATTTGTGAATGTTGGTCTTTTGAAGAGATGAGAATTGGAGGTGGGGAGAAGACGAAGAAGATGCCATCATTTGAAGATAGTATGGCCATGAAAGAGCATATCAGATCTTGGGCTTATGCAGTGGCTTGTACTGTTAGATGA

Coding sequence (CDS)

ATGGAGCGTAAGACTAAGGCGAAGCCACACGCTCTCGTTTGCGTTCCTAAGAAACTAGGCTCCGTTGAGTTCTTGGGCGTCCAATACAATACAACGATGGAAGGCCAGCAGGTTCTGGAGAATTTCGATTCTCTCTGGTTCTTCGCCACCGTATTCTCCAACAGAACGCCACCGGTCGTTGGAAAACCCATTCAAAACGACTTCGTTGGTTCTCTCGGAGAAGAAATTGCGACACCCATCACTCGAAATGAGGAAAATAATGTTTGTGAAGCGAAGGAGATGGAAACCGAGGAGAGGGAAGAGAAGAGGAGAAAAAACAGAGGAGGGAGGAGTTGGGGTTTGGAACAGAGGAAAAAATTTATTGTTGGAGAGATAGATCTGAGTTATGCTGTGAAGGAGATTTGTGAATGTTGGTCTTTTGAAGAGATGAGAATTGGAGGTGGGGAGAAGACGAAGAAGATGCCATCATTTGAAGATAGTATGGCCATGAAAGAGCATATCAGATCTTGGGCTTATGCAGTGGCTTGTACTGTTAGATGA

Protein sequence

MERKTKAKPHALVCVPKKLGSVEFLGVQYNTTMEGQQVLENFDSLWFFATVFSNRTPPVVGKPIQNDFVGSLGEEIATPITRNEENNVCEAKEMETEEREEKRRKNRGGRSWGLEQRKKFIVGEIDLSYAVKEICECWSFEEMRIGGGEKTKKMPSFEDSMAMKEHIRSWAYAVACTVR*

Homology

[Close]

BLAST of CsGy1G021605.1 vs. NCBI nr
Match: KAE8653211.1 (hypothetical protein Csa_019764 [Cucumis sativus])

HSP 1 Score: 365 bits (936), Expect = 2.90e-127
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MERKTKAKPHALVCVPKKLGSVEFLGVQYNTTMEGQQVLENFDSLWFFATVFSNRTPPVV 60
           MERKTKAKPHALVCVPKKLGSVEFLGVQYNTTMEGQQVLENFDSLWFFATVFSNRTPPVV
Sbjct: 1   MERKTKAKPHALVCVPKKLGSVEFLGVQYNTTMEGQQVLENFDSLWFFATVFSNRTPPVV 60

Query: 61  GKPIQNDFVGSLGEEIATPITRNEENNVCEAKEMETEEREEKRRKNRGGRSWGLEQRKKF 120
           GKPIQNDFVGSLGEEIATPITRNEENNVCEAKEMETEEREEKRRKNRGGRSWGLEQRKKF
Sbjct: 61  GKPIQNDFVGSLGEEIATPITRNEENNVCEAKEMETEEREEKRRKNRGGRSWGLEQRKKF 120

Query: 121 IVGEIDLSYAVKEICECWSFEEMRIGGGEKTKKMPSFEDSMAMKEHIRSWAYAVACTVR 179
           IVGEIDLSYAVKEICECWSFEEMRIGGGEKTKKMPSFEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 IVGEIDLSYAVKEICECWSFEEMRIGGGEKTKKMPSFEDSMAMKEHIRSWAYAVACTVR 179

[Close]

BLAST of CsGy1G021605.1 vs. NCBI nr
Match: XP_011657601.1 (uncharacterized protein LOC101209234 [Cucumis sativus])

HSP 1 Score: 301 bits (770), Expect = 1.95e-102
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 33  MEGQQVLENFDSLWFFATVFSNRTPPVVGKPIQNDFVGSLGEEIATPITRNEENNVCEAK 92
           MEGQQVLENFDSLWFFATVFSNRTPPVVGKPIQNDFVGSLGEEIATPITRNEENNVCEAK
Sbjct: 1   MEGQQVLENFDSLWFFATVFSNRTPPVVGKPIQNDFVGSLGEEIATPITRNEENNVCEAK 60

Query: 93  EMETEEREEKRRKNRGGRSWGLEQRKKFIVGEIDLSYAVKEICECWSFEEMRIGGGEKTK 152
           EMETEEREEKRRKNRGGRSWGLEQRKKFIVGEIDLSYAVKEICECWSFEEMRIGGGEKTK
Sbjct: 61  EMETEEREEKRRKNRGGRSWGLEQRKKFIVGEIDLSYAVKEICECWSFEEMRIGGGEKTK 120

Query: 153 KMPSFEDSMAMKEHIRSWAYAVACTVR 179
           KMPSFEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 KMPSFEDSMAMKEHIRSWAYAVACTVR 147

[Close]

BLAST of CsGy1G021605.1 vs. NCBI nr
Match: XP_008443476.1 (PREDICTED: uncharacterized protein LOC103487056 [Cucumis melo] >KAA0057057.1 uncharacterized protein E6C27_scaffold96G002450 [Cucumis melo var. makuwa])

HSP 1 Score: 270 bits (691), Expect = 2.15e-90
Identity = 133/147 (90.48%), Postives = 138/147 (93.88%), Query Frame = 0


Query: 33  MEGQQVLENFDSLWFFATVFSNRTPPVVGKPIQNDFVGSLGEEIATPITRNEENNVCEAK 92
           MEGQQV ENFDSLWFF+TVFSNRTPPVV KPIQNDFV  LGEEIATPITRNEEN+V E K
Sbjct: 1   MEGQQVFENFDSLWFFSTVFSNRTPPVVEKPIQNDFVEPLGEEIATPITRNEENDVGEEK 60

Query: 93  EMETEEREEKRRKNRGGRSWGLEQRKKFIVGEIDLSYAVKEICECWSFEEMRIGGGEKTK 152
           EMETEE EEKRRKNRG RSWGLEQR+KF+VGEIDLSYAVKEICECWSFE MRIGGG+KTK
Sbjct: 61  EMETEEMEEKRRKNRGRRSWGLEQRRKFVVGEIDLSYAVKEICECWSFEVMRIGGGKKTK 120

Query: 153 KMPSFEDSMAMKEHIRSWAYAVACTVR 179
           KMPSFEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 KMPSFEDSMAMKEHIRSWAYAVACTVR 147

[Close]

BLAST of CsGy1G021605.1 vs. NCBI nr
Match: XP_038895160.1 (uncharacterized protein LOC120083464 [Benincasa hispida])

HSP 1 Score: 218 bits (555), Expect = 1.95e-69
Identity = 120/166 (72.29%), Postives = 131/166 (78.92%), Query Frame = 0


Query: 33  MEGQQVLENFDSLWFFATVFSNRTPP-----VVGKPIQNDFVGSLGEEIATPITRNEENN 92
           MEGQQVLEN+DSLWFFATVFSNRTPP     VV  P QNDFV   GEEIATP+T NE+NN
Sbjct: 1   MEGQQVLENWDSLWFFATVFSNRTPPPPPPPVVENPTQNDFVEPPGEEIATPLTPNEQNN 60

Query: 93  VCEAKEME--------TEEREEKRRKNRGGRSWGLEQRKKFIVGEIDLSYAVKEICECWS 152
           V + K++E        TEE+E+ RRKNRG R WGLEQR+K IVGE+DLSYAVKEICECW 
Sbjct: 61  VGDEKKIENGGGFGIKTEEKEQ-RRKNRGRRCWGLEQRRK-IVGEMDLSYAVKEICECWL 120

Query: 153 FEEMRIGGG------EKTKKMPSFEDSMAMKEHIRSWAYAVACTVR 179
           FEE RIGGG      +KTKKMP FEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 FEETRIGGGNQYQRKKKTKKMPPFEDSMAMKEHIRSWAYAVACTVR 164

[Close]

BLAST of CsGy1G021605.1 vs. NCBI nr
Match: BAD93608.1 (hypothetical protein, partial [Cucumis melo])

HSP 1 Score: 172 bits (435), Expect = 5.50e-52
Identity = 86/99 (86.87%), Postives = 90/99 (90.91%), Query Frame = 0


Query: 29  YNTTMEGQQVLENFDSLWFFATVFSNRTPPVVGKPIQNDFVGSLGEEIATPITRNEENNV 88
           YNT MEGQQV ENFDSLWFF+TVFSNRTPPVV KPIQNDFV  LGEEIATPITRNEEN+V
Sbjct: 1   YNTPMEGQQVFENFDSLWFFSTVFSNRTPPVVEKPIQNDFVEPLGEEIATPITRNEENDV 60

Query: 89  CEAKEMETEEREEKRRKNRGGRSWGLEQRKKFIVGEIDL 127
            E KEMETEE EEKRRKNRG RSWGLEQR+KF+VGEIDL
Sbjct: 61  GEEKEMETEEMEEKRRKNRGRRSWGLEQRRKFVVGEIDL 99

[Close]

BLAST of CsGy1G021605.1 vs. ExPASy TrEMBL
Match: A0A0A0LX63 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G470250 PE=4 SV=1)

HSP 1 Score: 301 bits (770), Expect = 9.45e-103
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 33  MEGQQVLENFDSLWFFATVFSNRTPPVVGKPIQNDFVGSLGEEIATPITRNEENNVCEAK 92
           MEGQQVLENFDSLWFFATVFSNRTPPVVGKPIQNDFVGSLGEEIATPITRNEENNVCEAK
Sbjct: 1   MEGQQVLENFDSLWFFATVFSNRTPPVVGKPIQNDFVGSLGEEIATPITRNEENNVCEAK 60

Query: 93  EMETEEREEKRRKNRGGRSWGLEQRKKFIVGEIDLSYAVKEICECWSFEEMRIGGGEKTK 152
           EMETEEREEKRRKNRGGRSWGLEQRKKFIVGEIDLSYAVKEICECWSFEEMRIGGGEKTK
Sbjct: 61  EMETEEREEKRRKNRGGRSWGLEQRKKFIVGEIDLSYAVKEICECWSFEEMRIGGGEKTK 120

Query: 153 KMPSFEDSMAMKEHIRSWAYAVACTVR 179
           KMPSFEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 KMPSFEDSMAMKEHIRSWAYAVACTVR 147

[Close]

BLAST of CsGy1G021605.1 vs. ExPASy TrEMBL
Match: A0A5A7UQZ2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002450 PE=4 SV=1)

HSP 1 Score: 270 bits (691), Expect = 1.04e-90
Identity = 133/147 (90.48%), Postives = 138/147 (93.88%), Query Frame = 0


Query: 33  MEGQQVLENFDSLWFFATVFSNRTPPVVGKPIQNDFVGSLGEEIATPITRNEENNVCEAK 92
           MEGQQV ENFDSLWFF+TVFSNRTPPVV KPIQNDFV  LGEEIATPITRNEEN+V E K
Sbjct: 1   MEGQQVFENFDSLWFFSTVFSNRTPPVVEKPIQNDFVEPLGEEIATPITRNEENDVGEEK 60

Query: 93  EMETEEREEKRRKNRGGRSWGLEQRKKFIVGEIDLSYAVKEICECWSFEEMRIGGGEKTK 152
           EMETEE EEKRRKNRG RSWGLEQR+KF+VGEIDLSYAVKEICECWSFE MRIGGG+KTK
Sbjct: 61  EMETEEMEEKRRKNRGRRSWGLEQRRKFVVGEIDLSYAVKEICECWSFEVMRIGGGKKTK 120

Query: 153 KMPSFEDSMAMKEHIRSWAYAVACTVR 179
           KMPSFEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 KMPSFEDSMAMKEHIRSWAYAVACTVR 147

[Close]

BLAST of CsGy1G021605.1 vs. ExPASy TrEMBL
Match: A0A1S3B8X4 (uncharacterized protein LOC103487056 OS=Cucumis melo OX=3656 GN=LOC103487056 PE=4 SV=1)

HSP 1 Score: 270 bits (691), Expect = 1.04e-90
Identity = 133/147 (90.48%), Postives = 138/147 (93.88%), Query Frame = 0


Query: 33  MEGQQVLENFDSLWFFATVFSNRTPPVVGKPIQNDFVGSLGEEIATPITRNEENNVCEAK 92
           MEGQQV ENFDSLWFF+TVFSNRTPPVV KPIQNDFV  LGEEIATPITRNEEN+V E K
Sbjct: 1   MEGQQVFENFDSLWFFSTVFSNRTPPVVEKPIQNDFVEPLGEEIATPITRNEENDVGEEK 60

Query: 93  EMETEEREEKRRKNRGGRSWGLEQRKKFIVGEIDLSYAVKEICECWSFEEMRIGGGEKTK 152
           EMETEE EEKRRKNRG RSWGLEQR+KF+VGEIDLSYAVKEICECWSFE MRIGGG+KTK
Sbjct: 61  EMETEEMEEKRRKNRGRRSWGLEQRRKFVVGEIDLSYAVKEICECWSFEVMRIGGGKKTK 120

Query: 153 KMPSFEDSMAMKEHIRSWAYAVACTVR 179
           KMPSFEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 KMPSFEDSMAMKEHIRSWAYAVACTVR 147

[Close]

BLAST of CsGy1G021605.1 vs. ExPASy TrEMBL
Match: Q58A15 (Uncharacterized protein 7G02 (Fragment) OS=Cucumis melo OX=3656 GN=7G02 PE=2 SV=1)

HSP 1 Score: 172 bits (435), Expect = 2.66e-52
Identity = 86/99 (86.87%), Postives = 90/99 (90.91%), Query Frame = 0


Query: 29  YNTTMEGQQVLENFDSLWFFATVFSNRTPPVVGKPIQNDFVGSLGEEIATPITRNEENNV 88
           YNT MEGQQV ENFDSLWFF+TVFSNRTPPVV KPIQNDFV  LGEEIATPITRNEEN+V
Sbjct: 1   YNTPMEGQQVFENFDSLWFFSTVFSNRTPPVVEKPIQNDFVEPLGEEIATPITRNEENDV 60

Query: 89  CEAKEMETEEREEKRRKNRGGRSWGLEQRKKFIVGEIDL 127
            E KEMETEE EEKRRKNRG RSWGLEQR+KF+VGEIDL
Sbjct: 61  GEEKEMETEEMEEKRRKNRGRRSWGLEQRRKFVVGEIDL 99

[Close]

BLAST of CsGy1G021605.1 vs. ExPASy TrEMBL
Match: A0A6J1EGY0 (uncharacterized protein LOC111434099 OS=Cucurbita moschata OX=3662 GN=LOC111434099 PE=4 SV=1)

HSP 1 Score: 172 bits (437), Expect = 8.30e-52
Identity = 103/167 (61.68%), Postives = 117/167 (70.06%), Query Frame = 0


Query: 33  MEGQQVLENFDSLWFFATVFSNRTPP-VVGKPIQNDFVGSLGEEIATPITRNEEN----- 92
           ME QQVL+N DSLWFFATVFSNRTPP VV KP Q+DFV   G EIATPI +N++N     
Sbjct: 1   MEDQQVLQNLDSLWFFATVFSNRTPPPVVQKPTQHDFVEPPGGEIATPIFQNQQNVGEER 60

Query: 93  NVCEAKEMETEER-----EEKRRKNRGGRSWGLEQRKKFIVGEIDLSYAVKEICECWSFE 152
           N+ + K  ET         E+RRK+RG R WG   +++ IVGE+DLS AVKEICECW  E
Sbjct: 61  NIVDEKTNETGGGLGLIITEERRKSRG-RRWGCLGQRRKIVGEMDLSDAVKEICECWLLE 120

Query: 153 EMRIGGGE---------KTKKMPSFEDSMAMKEHIRSWAYAVACTVR 179
           + RIGGG          K KKMP FEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 Q-RIGGGNQYQRGGRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR 165

The following BLAST results are available for this feature:

BLAST of CsGy1G021605.1 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy1G021605.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8653211.1	2.90e-127	100.00	hypothetical protein Csa_019764 [Cucumis sativus]	[more]
XP_011657601.1	1.95e-102	100.00	uncharacterized protein LOC101209234 [Cucumis sativus]	[more]
XP_008443476.1	2.15e-90	90.48	PREDICTED: uncharacterized protein LOC103487056 [Cucumis melo] >KAA0057057.1 unc...	[more]
XP_038895160.1	1.95e-69	72.29	uncharacterized protein LOC120083464 [Benincasa hispida]	[more]
BAD93608.1	5.50e-52	86.87	hypothetical protein, partial [Cucumis melo]	[more]

BLAST of CsGy1G021605.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LX63	9.45e-103	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G470250 PE=4 SV=1	[more]
A0A5A7UQZ2	1.04e-90	90.48	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3B8X4	1.04e-90	90.48	uncharacterized protein LOC103487056 OS=Cucumis melo OX=3656 GN=LOC103487056 PE=...	[more]
Q58A15	2.66e-52	86.87	Uncharacterized protein 7G02 (Fragment) OS=Cucumis melo OX=3656 GN=7G02 PE=2 SV=...	[more]
A0A6J1EGY0	8.30e-52	61.68	uncharacterized protein LOC111434099 OS=Cucurbita moschata OX=3662 GN=LOC1114340...	[more]

BLAST of CsGy1G021605.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33785	FAMILY NOT NAMED	coord: 33..62
None	No IPR available	PANTHER	PTHR33785:SF8	SUBFAMILY NOT NAMED	coord: 63..179 coord: 33..62
None	No IPR available	PANTHER	PTHR33785	FAMILY NOT NAMED	coord: 63..179

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy1G021605	CsGy1G021605	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy1G021605.1.exon1	CsGy1G021605.1.exon1	exon
CsGy1G021605.1.exon2	CsGy1G021605.1.exon2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.CsGy1G021605.1	cds.CsGy1G021605.1	CDS
cds.CsGy1G021605.1	cds.CsGy1G021605.1_2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy1G021605.1	CsGy1G021605.1-protein	polypeptide