CsGy1G011830.1 (mRNA) Cucumber (Gy14) v2.1

Overview
NameCsGy1G011830.1
TypemRNA
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionTyrosinase_Cu-bd domain-containing protein
LocationGy14Chr1: 7457673 .. 7457900 (-)
Sequence length228
RNA-Seq ExpressionCsGy1G011830.1
SyntenyCsGy1G011830.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACTGTTTGGACTTGGAGGGCTTCACGGCGTCACGACTCTTAGCAGCGATAACTTTATTTGCATTGGCGGATTCGCTGTTGTCGCCGGATGTTCTTAACTGCGTGACAAAAGGAAAACACCAGCAGGGGACGATGGATGTTGCCCACCTGAAATCGAAGAAATTATTGAGTTTGTCCCCCCGGTCATTCCAACACCCCGTATCCGACCCGCTGCCCATACAATGA

mRNA sequence

ATGTACTGTTTGGACTTGGAGGGCTTCACGGCGTCACGACTCTTAGCAGCGATAACTTTATTTGCATTGGCGGATTCGCTGTTGTCGCCGGATGTTCTTAACTGCGTGACAAAAGGAAAACACCAGCAGGGGACGATGGATGTTGCCCACCTGAAATCGAAGAAATTATTGAGTTTGTCCCCCCGGTCATTCCAACACCCCGTATCCGACCCGCTGCCCATACAATGA

Coding sequence (CDS)

ATGTACTGTTTGGACTTGGAGGGCTTCACGGCGTCACGACTCTTAGCAGCGATAACTTTATTTGCATTGGCGGATTCGCTGTTGTCGCCGGATGTTCTTAACTGCGTGACAAAAGGAAAACACCAGCAGGGGACGATGGATGTTGCCCACCTGAAATCGAAGAAATTATTGAGTTTGTCCCCCCGGTCATTCCAACACCCCGTATCCGACCCGCTGCCCATACAATGA

Protein sequence

MYCLDLEGFTASRLLAAITLFALADSLLSPDVLNCVTKGKHQQGTMDVAHLKSKKLLSLSPRSFQHPVSDPLPIQ*
Homology
[Close]
BLAST of CsGy1G011830.1 vs. NCBI nr
Match: KAE8652707.1 (hypothetical protein Csa_013729 [Cucumis sativus])

HSP 1 Score: 138 bits (347), Expect = 2.33e-39
Identity = 69/74 (93.24%), Postives = 71/74 (95.95%), Query Frame = 0 

Query: 1  MYCLDLEGFTASRLLAAITLFALADSLLSPDVLNCVTKGKHQQGTMDVAHLKSKKLLSLS 60
          MYCLDLEGFTASRLLAAITLFALADSLLSPDVLNCVTKGKHQQGTMDVAHLKSKKLLSLS
Sbjct: 1  MYCLDLEGFTASRLLAAITLFALADSLLSPDVLNCVTKGKHQQGTMDVAHLKSKKLLSLS 60

Query: 61 PRSFQHPVSDPLPI 74
          PRSFQHP+   +PI
Sbjct: 61 PRSFQHPLMSTVPI 74

[Close]
BLAST of CsGy1G011830.1 vs. ExPASy TrEMBL
Match: A0A0A0LRV2 (Tyrosinase_Cu-bd domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G073100 PE=4 SV=1)

HSP 1 Score: 138 bits (347), Expect = 2.68e-38
Identity = 69/74 (93.24%), Postives = 71/74 (95.95%), Query Frame = 0 

Query: 1  MYCLDLEGFTASRLLAAITLFALADSLLSPDVLNCVTKGKHQQGTMDVAHLKSKKLLSLS 60
          MYCLDLEGFTASRLLAAITLFALADSLLSPDVLNCVTKGKHQQGTMDVAHLKSKKLLSLS
Sbjct: 1  MYCLDLEGFTASRLLAAITLFALADSLLSPDVLNCVTKGKHQQGTMDVAHLKSKKLLSLS 60

Query: 61 PRSFQHPVSDPLPI 74
          PRSFQHP+   +PI
Sbjct: 61 PRSFQHPLMSTVPI 74

The following BLAST results are available for this feature:
BLAST of CsGy1G011830.1 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy1G011830.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8652707.12.33e-3993.24hypothetical protein Csa_013729 [Cucumis sativus][more]
BLAST of CsGy1G011830.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LRV22.68e-3893.24Tyrosinase_Cu-bd domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G0... [more]
BLAST of CsGy1G011830.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CsGy1G011830CsGy1G011830gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy1G011830.1.exon1CsGy1G011830.1.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.CsGy1G011830.1cds.CsGy1G011830.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CsGy1G011830.1CsGy1G011830.1-proteinpolypeptide