Cp4.1LG20g08970.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG20g08970.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	proline-rich receptor-like protein kinase PERK10
Location	Cp4.1LG20: 6930333 .. 6930833 (-)
Sequence length	501
RNA-Seq Expression	Cp4.1LG20g08970.1
Synteny	Cp4.1LG20g08970.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAAGGTCACATCAATTTGTTGCGCGGTTCTTTCGGTTCTGCTTTTGGCGCAGTTCTCTGTTTCTGTGGATTTTCCCGCGGAATCTCCCGCTCCGCCACCGCAGACTGGCGCGGATTCCCCTCCGCCGCGTTCTCCTTCGAGAATCTCCAGTCCTCCGGCTCCATCGCCTCGGAATGCACCGGTGAGTTCTCCTCCATCACCTCCACTATCAGATCTTGCTCCTGGTTCGTCTCCAACTCCACCGCCTCCTCCTTCCTCTTCTCCGTCTCCACCGCCATCCGAAGCTAGCGACATTAGCCGGAACAATGTGAGCAAAAACGACGAATCGGATGAAGAATCGAAGAACGGAATGAGTGGAGCGAAGAAATTCGGAATCGCAATAGGAGTGATCGCGGCAGTTGCTTTGATTGGATTCGGAGGATTGGTGTACAAGAAGCGCCAAGACAATATTCGCCGGTCTCGCTATGGATATACAGCGAGGAGAGAGCTTCTGTGA

mRNA sequence

ATGGCCAAGGTCACATCAATTTGTTGCGCGGTTCTTTCGGTTCTGCTTTTGGCGCAGTTCTCTGTTTCTGTGGATTTTCCCGCGGAATCTCCCGCTCCGCCACCGCAGACTGGCGCGGATTCCCCTCCGCCGCGTTCTCCTTCGAGAATCTCCAGTCCTCCGGCTCCATCGCCTCGGAATGCACCGGTGAGTTCTCCTCCATCACCTCCACTATCAGATCTTGCTCCTGGTTCGTCTCCAACTCCACCGCCTCCTCCTTCCTCTTCTCCGTCTCCACCGCCATCCGAAGCTAGCGACATTAGCCGGAACAATGTGAGCAAAAACGACGAATCGGATGAAGAATCGAAGAACGGAATGAGTGGAGCGAAGAAATTCGGAATCGCAATAGGAGTGATCGCGGCAGTTGCTTTGATTGGATTCGGAGGATTGGTGTACAAGAAGCGCCAAGACAATATTCGCCGGTCTCGCTATGGATATACAGCGAGGAGAGAGCTTCTGTGA

Coding sequence (CDS)

ATGGCCAAGGTCACATCAATTTGTTGCGCGGTTCTTTCGGTTCTGCTTTTGGCGCAGTTCTCTGTTTCTGTGGATTTTCCCGCGGAATCTCCCGCTCCGCCACCGCAGACTGGCGCGGATTCCCCTCCGCCGCGTTCTCCTTCGAGAATCTCCAGTCCTCCGGCTCCATCGCCTCGGAATGCACCGGTGAGTTCTCCTCCATCACCTCCACTATCAGATCTTGCTCCTGGTTCGTCTCCAACTCCACCGCCTCCTCCTTCCTCTTCTCCGTCTCCACCGCCATCCGAAGCTAGCGACATTAGCCGGAACAATGTGAGCAAAAACGACGAATCGGATGAAGAATCGAAGAACGGAATGAGTGGAGCGAAGAAATTCGGAATCGCAATAGGAGTGATCGCGGCAGTTGCTTTGATTGGATTCGGAGGATTGGTGTACAAGAAGCGCCAAGACAATATTCGCCGGTCTCGCTATGGATATACAGCGAGGAGAGAGCTTCTGTGA

Protein sequence

MAKVTSICCAVLSVLLLAQFSVSVDFPAESPAPPPQTGADSPPPRSPSRISSPPAPSPRNAPVSSPPSPPLSDLAPGSSPTPPPPPSSSPSPPPSEASDISRNNVSKNDESDEESKNGMSGAKKFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL

Homology

[Close]

BLAST of Cp4.1LG20g08970.1 vs. NCBI nr
Match: XP_023520008.1 (classical arabinogalactan protein 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 290 bits (741), Expect = 5.63e-98
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MAKVTSICCAVLSVLLLAQFSVSVDFPAESPAPPPQTGADSPPPRSPSRISSPPAPSPRN 60
           MAKVTSICCAVLSVLLLAQFSVSVDFPAESPAPPPQTGADSPPPRSPSRISSPPAPSPRN
Sbjct: 1   MAKVTSICCAVLSVLLLAQFSVSVDFPAESPAPPPQTGADSPPPRSPSRISSPPAPSPRN 60

Query: 61  APVSSPPSPPLSDLAPGSSPTPPPPPSSSPSPPPSEASDISRNNVSKNDESDEESKNGMS 120
           APVSSPPSPPLSDLAPGSSPTPPPPPSSSPSPPPSEASDISRNNVSKNDESDEESKNGMS
Sbjct: 61  APVSSPPSPPLSDLAPGSSPTPPPPPSSSPSPPPSEASDISRNNVSKNDESDEESKNGMS 120

Query: 121 GAKKFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL 166
           GAKKFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL
Sbjct: 121 GAKKFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL 166

[Close]

BLAST of Cp4.1LG20g08970.1 vs. NCBI nr
Match: XP_022970448.1 (lysine-rich arabinogalactan protein 19-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 278 bits (711), Expect = 2.10e-93
Identity = 161/166 (96.99%), Postives = 163/166 (98.19%), Query Frame = 0


Query: 1   MAKVTSICCAVLSVLLLAQFSVSVDFPAESPAPPPQTGADSPPPRSPSRISSPPAPSPRN 60
           MAKVTSICCAVLSVLLLAQFSVSVD PAESPAPPPQTGADSPPPRSPSRISSPPAPSPRN
Sbjct: 1   MAKVTSICCAVLSVLLLAQFSVSVDSPAESPAPPPQTGADSPPPRSPSRISSPPAPSPRN 60

Query: 61  APVSSPPSPPLSDLAPGSSPTPPPPPSSSPSPPPSEASDISRNNVSKNDESDEESKNGMS 120
           APVSSPP+PP SDLAPGSSPTPPPPPSSSPSP PSEASDISRNNVSKNDESDEESKNGMS
Sbjct: 61  APVSSPPAPPPSDLAPGSSPTPPPPPSSSPSPSPSEASDISRNNVSKNDESDEESKNGMS 120

Query: 121 GAKKFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL 166
           GA+KFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL
Sbjct: 121 GAQKFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL 166

[Close]

BLAST of Cp4.1LG20g08970.1 vs. NCBI nr
Match: KAG7019236.1 (hypothetical protein SDJN02_18195, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 274 bits (701), Expect = 7.53e-92
Identity = 161/168 (95.83%), Postives = 163/168 (97.02%), Query Frame = 0


Query: 1   MAKVTSICCAVLSVLLLAQFSVSVDFPAESPAPPPQTGADSPPPRSPSRISSPPAPSPRN 60
           MAKVTSICCAVLSVLLLAQFSVSVD PAESPAPPPQTGADSPPPRSPSRISSPPAPSPRN
Sbjct: 1   MAKVTSICCAVLSVLLLAQFSVSVDSPAESPAPPPQTGADSPPPRSPSRISSPPAPSPRN 60

Query: 61  APVSSPPSPPLSDLAPGSSPTPPPPP--SSSPSPPPSEASDISRNNVSKNDESDEESKNG 120
           APVSSPP+PP SDL PGSSPTPPPPP  SSSPSPPPSEASDISRNNVSKNDESDEESKNG
Sbjct: 61  APVSSPPAPPPSDLPPGSSPTPPPPPPPSSSPSPPPSEASDISRNNVSKNDESDEESKNG 120

Query: 121 MSGAKKFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL 166
           MSGA+KFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL
Sbjct: 121 MSGAQKFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL 168

[Close]

BLAST of Cp4.1LG20g08970.1 vs. NCBI nr
Match: KAG6583481.1 (hypothetical protein SDJN03_19413, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 273 bits (699), Expect = 1.63e-91
Identity = 161/170 (94.71%), Postives = 163/170 (95.88%), Query Frame = 0


Query: 1   MAKVTSICCAVLSVLLLAQFSVSVDFPAESPAPPPQTGADSPPPRSPSRISSPPAPSPRN 60
           MAKVTSICCAVLSVLLLAQFSVSVD PAESPAPPPQTGADSPPPRSPSRISSPPAPSPRN
Sbjct: 1   MAKVTSICCAVLSVLLLAQFSVSVDSPAESPAPPPQTGADSPPPRSPSRISSPPAPSPRN 60

Query: 61  APVSSPPSPPLSDLAPGSSPTPPPPP----SSSPSPPPSEASDISRNNVSKNDESDEESK 120
           APVSSPP+PP SDL PGSSPTPPPPP    SSSPSPPPSEASDISRNNVSKNDESDEESK
Sbjct: 61  APVSSPPAPPPSDLPPGSSPTPPPPPPPPPSSSPSPPPSEASDISRNNVSKNDESDEESK 120

Query: 121 NGMSGAKKFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL 166
           NGMSGA+KFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL
Sbjct: 121 NGMSGAQKFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL 170

[Close]

BLAST of Cp4.1LG20g08970.1 vs. NCBI nr
Match: XP_022964902.1 (proline-rich receptor-like protein kinase PERK10 [Cucurbita moschata])

HSP 1 Score: 256 bits (653), Expect = 1.03e-84
Identity = 151/166 (90.96%), Postives = 153/166 (92.17%), Query Frame = 0


Query: 1   MAKVTSICCAVLSVLLLAQFSVSVDFPAESPAPPPQTGADSPPPRSPSRISSPPAPSPRN 60
           MAKVTSICCAVLSVLLLAQFSVSVD PAESPAPPPQ GADSPPPRSPSRISSPPAPSPRN
Sbjct: 1   MAKVTSICCAVLSVLLLAQFSVSVDSPAESPAPPPQAGADSPPPRSPSRISSPPAPSPRN 60

Query: 61  APVSSPPSPPLSDLAPGSSPTPPPPPSSSPSPPPSEASDISRNNVSKNDESDEESKNGMS 120
           APVSSPP+PP SDL          PPSSSPSPPPSEASDISRNNVSKNDESDEESKNGMS
Sbjct: 61  APVSSPPAPPPSDL----------PPSSSPSPPPSEASDISRNNVSKNDESDEESKNGMS 120

Query: 121 GAKKFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL 166
           GA+KFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL
Sbjct: 121 GAQKFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL 156

[Close]

BLAST of Cp4.1LG20g08970.1 vs. ExPASy TrEMBL
Match: A0A6J1I3V8 (lysine-rich arabinogalactan protein 19-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469424 PE=4 SV=1)

HSP 1 Score: 278 bits (711), Expect = 1.02e-93
Identity = 161/166 (96.99%), Postives = 163/166 (98.19%), Query Frame = 0


Query: 1   MAKVTSICCAVLSVLLLAQFSVSVDFPAESPAPPPQTGADSPPPRSPSRISSPPAPSPRN 60
           MAKVTSICCAVLSVLLLAQFSVSVD PAESPAPPPQTGADSPPPRSPSRISSPPAPSPRN
Sbjct: 1   MAKVTSICCAVLSVLLLAQFSVSVDSPAESPAPPPQTGADSPPPRSPSRISSPPAPSPRN 60

Query: 61  APVSSPPSPPLSDLAPGSSPTPPPPPSSSPSPPPSEASDISRNNVSKNDESDEESKNGMS 120
           APVSSPP+PP SDLAPGSSPTPPPPPSSSPSP PSEASDISRNNVSKNDESDEESKNGMS
Sbjct: 61  APVSSPPAPPPSDLAPGSSPTPPPPPSSSPSPSPSEASDISRNNVSKNDESDEESKNGMS 120

Query: 121 GAKKFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL 166
           GA+KFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL
Sbjct: 121 GAQKFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL 166

[Close]

BLAST of Cp4.1LG20g08970.1 vs. ExPASy TrEMBL
Match: A0A6J1HIX9 (proline-rich receptor-like protein kinase PERK10 OS=Cucurbita moschata OX=3662 GN=LOC111464868 PE=4 SV=1)

HSP 1 Score: 256 bits (653), Expect = 5.00e-85
Identity = 151/166 (90.96%), Postives = 153/166 (92.17%), Query Frame = 0


Query: 1   MAKVTSICCAVLSVLLLAQFSVSVDFPAESPAPPPQTGADSPPPRSPSRISSPPAPSPRN 60
           MAKVTSICCAVLSVLLLAQFSVSVD PAESPAPPPQ GADSPPPRSPSRISSPPAPSPRN
Sbjct: 1   MAKVTSICCAVLSVLLLAQFSVSVDSPAESPAPPPQAGADSPPPRSPSRISSPPAPSPRN 60

Query: 61  APVSSPPSPPLSDLAPGSSPTPPPPPSSSPSPPPSEASDISRNNVSKNDESDEESKNGMS 120
           APVSSPP+PP SDL          PPSSSPSPPPSEASDISRNNVSKNDESDEESKNGMS
Sbjct: 61  APVSSPPAPPPSDL----------PPSSSPSPPPSEASDISRNNVSKNDESDEESKNGMS 120

Query: 121 GAKKFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL 166
           GA+KFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL
Sbjct: 121 GAQKFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL 156

[Close]

BLAST of Cp4.1LG20g08970.1 vs. ExPASy TrEMBL
Match: A0A6J1I5I8 (proline-rich receptor-like protein kinase PERK10 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111469424 PE=4 SV=1)

HSP 1 Score: 254 bits (650), Expect = 1.43e-84
Identity = 151/166 (90.96%), Postives = 153/166 (92.17%), Query Frame = 0


Query: 1   MAKVTSICCAVLSVLLLAQFSVSVDFPAESPAPPPQTGADSPPPRSPSRISSPPAPSPRN 60
           MAKVTSICCAVLSVLLLAQFSVSVD PAESPAPPPQTGADSPPPRSPSRISSPPAPSPRN
Sbjct: 1   MAKVTSICCAVLSVLLLAQFSVSVDSPAESPAPPPQTGADSPPPRSPSRISSPPAPSPRN 60

Query: 61  APVSSPPSPPLSDLAPGSSPTPPPPPSSSPSPPPSEASDISRNNVSKNDESDEESKNGMS 120
           APVSSPP+PP SDL          PPSSSPSP PSEASDISRNNVSKNDESDEESKNGMS
Sbjct: 61  APVSSPPAPPPSDL----------PPSSSPSPSPSEASDISRNNVSKNDESDEESKNGMS 120

Query: 121 GAKKFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL 166
           GA+KFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL
Sbjct: 121 GAQKFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL 156

[Close]

BLAST of Cp4.1LG20g08970.1 vs. ExPASy TrEMBL
Match: A0A5D3DCM4 (Classical arabinogalactan protein 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold359G00590 PE=4 SV=1)

HSP 1 Score: 237 bits (605), Expect = 1.59e-77
Identity = 144/169 (85.21%), Postives = 150/169 (88.76%), Query Frame = 0


Query: 1   MAKVTSICCAVLSVLLLAQFSVSVDFPAESPAPPPQTGADSPPPRSPSRISSPPAPSPRN 60
           MAKV S CCAVLSVLLL Q SVS D PAESPAPPPQTG DSPPPR+PS ISSPP  SPRN
Sbjct: 1   MAKVASFCCAVLSVLLLMQVSVSADSPAESPAPPPQTGVDSPPPRAPSSISSPPDASPRN 60

Query: 61  APVSSPPSPPLSDLAPGSSPT-PPPPPSSSP--SPPPSEASDISRNNVSKNDESDEESKN 120
           APVSSPPSPP SDLAP SSPT PPPPPSSSP  SPPPSEASD+SRNNV   +ESDEESK+
Sbjct: 61  APVSSPPSPPPSDLAPDSSPTSPPPPPSSSPAPSPPPSEASDVSRNNVISENESDEESKD 120

Query: 121 GMSGAKKFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL 166
           GMSGAKKFGIAIGVIAAVALIGFGG+VYKKRQDNIRRS YGYTARRE+L
Sbjct: 121 GMSGAKKFGIAIGVIAAVALIGFGGMVYKKRQDNIRRSHYGYTARREIL 169

[Close]

BLAST of Cp4.1LG20g08970.1 vs. ExPASy TrEMBL
Match: A0A1S3CQ09 (classical arabinogalactan protein 9 OS=Cucumis melo OX=3656 GN=LOC103502943 PE=4 SV=1)

HSP 1 Score: 237 bits (605), Expect = 1.59e-77
Identity = 144/169 (85.21%), Postives = 150/169 (88.76%), Query Frame = 0


Query: 1   MAKVTSICCAVLSVLLLAQFSVSVDFPAESPAPPPQTGADSPPPRSPSRISSPPAPSPRN 60
           MAKV S CCAVLSVLLL Q SVS D PAESPAPPPQTG DSPPPR+PS ISSPP  SPRN
Sbjct: 1   MAKVASFCCAVLSVLLLMQVSVSADSPAESPAPPPQTGVDSPPPRAPSSISSPPDASPRN 60

Query: 61  APVSSPPSPPLSDLAPGSSPT-PPPPPSSSP--SPPPSEASDISRNNVSKNDESDEESKN 120
           APVSSPPSPP SDLAP SSPT PPPPPSSSP  SPPPSEASD+SRNNV   +ESDEESK+
Sbjct: 61  APVSSPPSPPPSDLAPDSSPTSPPPPPSSSPAPSPPPSEASDVSRNNVISENESDEESKD 120

Query: 121 GMSGAKKFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL 166
           GMSGAKKFGIAIGVIAAVALIGFGG+VYKKRQDNIRRS YGYTARRE+L
Sbjct: 121 GMSGAKKFGIAIGVIAAVALIGFGGMVYKKRQDNIRRSHYGYTARREIL 169

[Close]

BLAST of Cp4.1LG20g08970.1 vs. TAIR 10
Match: AT3G45230.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 79.0 bits (193), Expect = 4.1e-15
Identity = 71/172 (41.28%), Postives = 99/172 (57.56%), Query Frame = 0


Query: 7   ICCAVLSVLLLAQFSVSVDFPAESP----------APPPQTGADSPPPRSPSRISSPPAP 66
           I   +LS++L++   ++   PA SP          +PP + G+ + P  SP   SSPP P
Sbjct: 7   IVAMMLSLVLVSGEILTKSSPAPSPDLADSPLIHASPPSKLGSHNSPAESPIEYSSPPEP 66

Query: 67  SPRNAPVSSPP-SPPLSDLAPGSSPTPPPPPSSSPSPPPSEASDISRNNVS--KNDESDE 126
              ++P  SP  SP +S   P  S +P    S SPSP   EASD++ ++++  + ++   
Sbjct: 67  ETEHSPSPSPANSPSVSPPLPNDSQSPSSSASPSPSP---EASDVNHSDITGIEGEKLPS 126

Query: 127 ESKNGMSGAKKFGIAIGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTARREL 166
            S  GMSG KK G+A G IAAV ++G  G VYKKRQ+NIRRSRYGY AR  L
Sbjct: 127 GSGGGMSGGKKVGVAFGAIAAVCVVGVAGFVYKKRQENIRRSRYGYAAREIL 175

[Close]

BLAST of Cp4.1LG20g08970.1 vs. TAIR 10
Match: AT2G28440.1 (proline-rich family protein )

HSP 1 Score: 57.4 bits (137), Expect = 1.3e-08
Identity = 64/156 (41.03%), Postives = 80/156 (51.28%), Query Frame = 0


Query: 28  AESPAPP--------PQTGADSPPPRSPSRISSPPAPSPRNAPVSSP------PSPPLSD 87
           A+SP PP        PQ+ A SP P S +   SPP P P+    SSP      P P  SD
Sbjct: 113 ADSPLPPSSSPEANSPQSPASSPKPESLADSPSPPPPPPQPESPSSPSYPEPAPVPAPSD 172

Query: 88  LAPGSSPTPPPP--PSSSPSPPPSEASDISRNNVSKNDESDEESKN-GMSGAKKFGIAIG 147
                 P P     PS +PSP    A DI  ++ +  + +DE  ++ GMSG +K GIAIG
Sbjct: 173 DDSDDDPEPETEYFPSPAPSPELGMAQDIKASDAAGEELNDERGEDYGMSGLEKAGIAIG 232

Query: 148 VIAAVALIGFGGLVYKKRQDNIRRSRYGYTARRELL 167
            I  V  I  G LVYKKR+DN+ R+RY Y    E L
Sbjct: 233 TILGVGAIVIGALVYKKRRDNMTRARYTYFTEGEFL 268

[Close]

BLAST of Cp4.1LG20g08970.1 vs. TAIR 10
Match: AT5G60630.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT3G45230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 42.7 bits (99), Expect = 3.3e-04
Identity = 41/105 (39.05%), Postives = 56/105 (53.33%), Query Frame = 0


Query: 65  SPPSPPLSDLAPGSSPTPPPPPSSSPSPPPSEASDISRNNVSKND-------ESDEESKN 124
           SP     S L    +   P P  S+    PS +     N+++  D       E+    +N
Sbjct: 31  SPAIEHSSSLPQSETEMSPSPTMSNDYDYPSSSQLTESNDLNYTDSTRPGGEEASVGGEN 90

Query: 125 GMSGAKKFGIA-IGVIAAVALIGFGGLVYKKRQDNIRRSRYGYTA 162
           G  G KK GIA +G IAA +++GFGG V KKR++NIRRSRYGY +
Sbjct: 91  GGGGGKKTGIAVVGSIAAASMVGFGGYVLKKRRENIRRSRYGYAS 135

The following BLAST results are available for this feature:

BLAST of Cp4.1LG20g08970.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG20g08970.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023520008.1	5.63e-98	100.00	classical arabinogalactan protein 5-like [Cucurbita pepo subsp. pepo]	[more]
XP_022970448.1	2.10e-93	96.99	lysine-rich arabinogalactan protein 19-like isoform X1 [Cucurbita maxima]	[more]
KAG7019236.1	7.53e-92	95.83	hypothetical protein SDJN02_18195, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6583481.1	1.63e-91	94.71	hypothetical protein SDJN03_19413, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022964902.1	1.03e-84	90.96	proline-rich receptor-like protein kinase PERK10 [Cucurbita moschata]	[more]

BLAST of Cp4.1LG20g08970.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I3V8	1.02e-93	96.99	lysine-rich arabinogalactan protein 19-like isoform X1 OS=Cucurbita maxima OX=36...	[more]
A0A6J1HIX9	5.00e-85	90.96	proline-rich receptor-like protein kinase PERK10 OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1I5I8	1.43e-84	90.96	proline-rich receptor-like protein kinase PERK10 isoform X2 OS=Cucurbita maxima ...	[more]
A0A5D3DCM4	1.59e-77	85.21	Classical arabinogalactan protein 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3CQ09	1.59e-77	85.21	classical arabinogalactan protein 9 OS=Cucumis melo OX=3656 GN=LOC103502943 PE=4...	[more]

BLAST of Cp4.1LG20g08970.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G45230.1	4.1e-15	41.28	hydroxyproline-rich glycoprotein family protein	[more]
AT2G28440.1	1.3e-08	41.03	proline-rich family protein	[more]
AT5G60630.1	3.3e-04	39.05	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..119
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..119
None	No IPR available	PANTHER	PTHR36721	PROLINE-RICH FAMILY PROTEIN	coord: 1..166
None	No IPR available	PANTHER	PTHR36721:SF5	PROTEIN, PUTATIVE-RELATED	coord: 1..166

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG20g08970	Cp4.1LG20g08970	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG20g08970.1:exon:001	Cp4.1LG20g08970.1:exon:001	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG20g08970.1:cds:001	Cp4.1LG20g08970.1:cds:001	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG20g08970.1	Cp4.1LG20g08970.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016301	kinase activity