Cp4.1LG20g01230.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAGGCTAATGAGAGAAATTGGCAGTCAAAATGGCAGCTTTGGCCTCGCCGGTGACATTTATTTGCTGTTTTGGGCGGCTCTGTTTACACTCTGCATAATCTCCACCATAATTTTCTCTTGCTCCGACGGCATGTCAACAAAAGACAGGAATTCCACGGCCGACGTTGAGCTTTATGGCGCCGGTTGCGCCGCCGGTTGCGGCGCTGGATGTGGTGCTTGA ATGGCGAGGCTAATGAGAGAAATTGGCAGTCAAAATGGCAGCTTTGGCCTCGCCGGTGACATTTATTTGCTGTTTTGGGCGGCTCTGTTTACACTCTGCATAATCTCCACCATAATTTTCTCTTGCTCCGACGGCATGTCAACAAAAGACAGGAATTCCACGGCCGACGTTGAGCTTTATGGCGCCGGTTGCGCCGCCGGTTGCGGCGCTGGATGTGGTGCTTGA ATGGCGAGGCTAATGAGAGAAATTGGCAGTCAAAATGGCAGCTTTGGCCTCGCCGGTGACATTTATTTGCTGTTTTGGGCGGCTCTGTTTACACTCTGCATAATCTCCACCATAATTTTCTCTTGCTCCGACGGCATGTCAACAAAAGACAGGAATTCCACGGCCGACGTTGAGCTTTATGGCGCCGGTTGCGCCGCCGGTTGCGGCGCTGGATGTGGTGCTTGA MARLMREIGSQNGSFGLAGDIYLLFWAALFTLCIISTIIFSCSDGMSTKDRNSTADVELYGAGCAAGCGAGCGA Homology
BLAST of Cp4.1LG20g01230.1 vs. NCBI nr
Match: KAG6584341.1 (hypothetical protein SDJN03_20273, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 145 bits (366), Expect = 1.03e-43 Identity = 73/74 (98.65%), Postives = 73/74 (98.65%), Query Frame = 0
BLAST of Cp4.1LG20g01230.1 vs. NCBI nr
Match: KAE8652552.1 (hypothetical protein Csa_013579 [Cucumis sativus]) HSP 1 Score: 122 bits (306), Expect = 3.35e-34 Identity = 65/75 (86.67%), Postives = 67/75 (89.33%), Query Frame = 0
BLAST of Cp4.1LG20g01230.1 vs. NCBI nr
Match: KAG6572949.1 (hypothetical protein SDJN03_26836, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 103 bits (258), Expect = 2.72e-27 Identity = 56/70 (80.00%), Postives = 61/70 (87.14%), Query Frame = 0
BLAST of Cp4.1LG20g01230.1 vs. NCBI nr
Match: ONI09219.1 (hypothetical protein PRUPE_5G224700 [Prunus persica]) HSP 1 Score: 86.7 bits (213), Expect = 2.15e-20 Identity = 42/74 (56.76%), Postives = 58/74 (78.38%), Query Frame = 0
BLAST of Cp4.1LG20g01230.1 vs. NCBI nr
Match: CAB4281319.1 (unnamed protein product [Prunus armeniaca] >CAB4311731.1 unnamed protein product [Prunus armeniaca]) HSP 1 Score: 86.7 bits (213), Expect = 2.15e-20 Identity = 43/74 (58.11%), Postives = 57/74 (77.03%), Query Frame = 0
BLAST of Cp4.1LG20g01230.1 vs. ExPASy TrEMBL
Match: A0A0A0LQU7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042580 PE=4 SV=1) HSP 1 Score: 122 bits (306), Expect = 7.19e-35 Identity = 65/75 (86.67%), Postives = 67/75 (89.33%), Query Frame = 0
BLAST of Cp4.1LG20g01230.1 vs. ExPASy TrEMBL
Match: M5WF59 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G224700 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 1.04e-20 Identity = 42/74 (56.76%), Postives = 58/74 (78.38%), Query Frame = 0
BLAST of Cp4.1LG20g01230.1 vs. ExPASy TrEMBL
Match: A0A6J5UX91 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS34361 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 1.04e-20 Identity = 43/74 (58.11%), Postives = 57/74 (77.03%), Query Frame = 0
BLAST of Cp4.1LG20g01230.1 vs. ExPASy TrEMBL
Match: A0A6P3ZT85 (uncharacterized protein LOC107418606 OS=Ziziphus jujuba OX=326968 GN=LOC107418606 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 2.32e-19 Identity = 47/74 (63.51%), Postives = 56/74 (75.68%), Query Frame = 0
BLAST of Cp4.1LG20g01230.1 vs. ExPASy TrEMBL
Match: A0A803R005 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 4.27e-18 Identity = 43/75 (57.33%), Postives = 53/75 (70.67%), Query Frame = 0
BLAST of Cp4.1LG20g01230.1 vs. TAIR 10
Match: AT1G68238.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 47.8 bits (112), Expect = 4.5e-06 Identity = 24/55 (43.64%), Postives = 33/55 (60.00%), Query Frame = 0
BLAST of Cp4.1LG20g01230.1 vs. TAIR 10
Match: AT3G18250.1 (Putative membrane lipoprotein ) HSP 1 Score: 42.0 bits (97), Expect = 2.5e-04 Identity = 23/57 (40.35%), Postives = 35/57 (61.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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