Cp4.1LG19g09890.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG19g09890.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	ras-related protein Rab11A-like
Location	Cp4.1LG19: 5805997 .. 5808370 (-)
Sequence length	1323
RNA-Seq Expression	Cp4.1LG19g09890.1
Synteny	Cp4.1LG19g09890.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAGCCGACCGCATCTCTCTGTTTTTTAATATTAAGGAGCTCGAATCACATGCATACAAACTCACCCTACTCTTTTCTAGTTATCCAGTGTTTTCAGTCCAGTTTATGACCGTAATTGGCTTGAGTTGTTTTTAGTTATCCAGGGTTTTCAGTGCAGTTTATGAATCAGTACCCACTGTAATTGGCTTGAGTTCTTGCAAACCCCGAGATGGGCTTTGAGTTCTTTCTGTTCATGTAGCTGCTGCCTTCGCTTTCACATAACTCTGCTGCTACTACTGGGTTCTGCTGTACTTTTTCTTCTTGCTGGATCCATTTCGAGCTTCTTCTTCTTCTTCTGTTGTACAGACGAGGGTTTTGTGAGCTGAGAGCTGGGAAAATGGCGAGCGGCGGCGGCGGATATGGGGATGCGAATCAGAAGATTGATTATGTGTTCAAAGTGGTGTTGATCGGGGACTCTGCGGTGGGTAAATCTCAGATTCTGGCGAGGTTTGCCCGGAACGAGTTCAGCTTGGATTCGAAGGCTACAATCGGTGTGGAGTTCCAGACTAGAACGCTAGTTATTCAGCATAAGAATGTTAAAGCTCAGATCTGGGATACTGCGGGCCAGGAAAGGTACTTTTTCCTCCATTTTTGTTTTCATTCCTCTTGTTGGGTTGGATTTTCTGTAGAATGATGGTGCCCTTTCTGCTTTTGGATTTCATCTGTTTAGTTAAAGGCAGATTATTCTATCTTTGAAGGCAGATTTTGTGCATGGATTCAGATTTTAGTTGTTTGGTTAAATGTTCATCATTCTGAATTGTGTGTATTTGAGAGGGAATGTGATGACATCGAAGATTAGCATAAGAGAATGTAATTGAGCAACATCTTTCATGTAACAACCCCTAACCAAACTAACATGGATCTCCCAATCTAATCTACTCTCCTAAGGGCCAACGCACCCATTAGCCCTTCATTCGATGCTTGGCTCTGAAAGGGAAAGATCATAGAGGGCAATATCTTGGGATTGAGCTATTACAAATGGTATCAGAGCCAAACATCAAGTGGTGTGCGAGCGAGGACGTTGGGCCTCCCATGGAAGTGGATTGTGAGATCCCACGTCGGTTAAAGAGGGAAACGAAACATTCTTTATAAAAGTGTGTAAACCTGTTCTTGGTAGACGCGTTTTAAAACTTTGAGGGAATGTTCGGAAGGAAAAGTATAAAGAGAATAATATCTGCTAGGAGTAGGCTTGGGTTGTTACAAATAGTGAGATCCCACGTTGGTTGGGGGTGTTAAATTTGGGGCTATTACATTTTTTGGCTACTCTTATTCCGTCTTTTGATTCTTCCTACAGGCTGTGTGGAAGCTTAACTATTATGTGTTAGGAATCACGATCTCTACAATGGTATGATATTATTGTCCATGAGCATAAGCTCTCATGACTTTGTTTTGAGCGTCTCCAAAAGGCCTCATACTGGAGATAGTATTCTTTGATTATAAACCTACTTTTATATTCAACATGACGGATATGAGCTTTTTAAGTTTTTCTTTATGATATTTGGTGTGTGGGGTTGGTAACGTTGATTTCTTAGTTATTTATTGCACGGTTGCTTCTTACAAGAATAGCAGAGAGTAGTATGCCATAGAACAGCTACATATCTTAACACATGGAGTATTTGAACAGATACAGAGCAGTTACAAGTGCATATTACCGAGGAGCTCTTGGGGCAATGCTTGCGTACGATATTACCAAACGCCAGAGCTTTGATCACATACCTCGTTGGCTTGAGGAGTTGCGGAGCCATGCTGACAAGAACATTGTCATCATCTTAATAGGAAACAAAAGTGATCTTGAAGACCAGCGTGCAGTCTCCACCGACGACGCCAAGGAATTCGCCGAGAAAGAAGGTTTGTTTTTCTTGGAGACCTCGGCTCTTGAATCCACCAATGTGGAGAGTGCCTTCATGACTATCTTAACTGAGATCTTCAACATCATGAACAAAAAGAACCTTGCTGCTGGTGAGAATCAAGGCAATGGCAACTCTGCATCCCTCGCCGGTGGTAAGAAGGTCATTATTCCGGGCCCGGCGCAAGAAATCCCGGCGAAAAGCAAGATCTGTTGTACTTCAACATGATTTGTTTGGAAGTAGGCTGCAATCGGGGGATCTAGGTGGGTTTTTTTTTTTTACTGGTGATGGTTTTCTGCGGTCATTTGTATATTTGATTGTATGCTTTAGTTTATATATTTACTTGAAGGACGGCAAATGAGGTTCTCATATATTTGATTTAATTAGTTTTCTTGGTTTCTTGTTCAAGAGAATTATTAATGTTGTATTTTTTGGATTAAACATCCGATATTATACGTATAAATAGAATTATGAAATGGTTTATCGTA

mRNA sequence

GGAGCCGACCGCATCTCTCTGTTTTTTAATATTAAGGAGCTCGAATCACATGCATACAAACTCACCCTACTCTTTTCTAGTTATCCAGTGTTTTCAGTCCAGTTTATGACCGTAATTGGCTTGAGTTGTTTTTAGTTATCCAGGGTTTTCAGTGCAGTTTATGAATCAGTACCCACTGTAATTGGCTTGAGTTCTTGCAAACCCCGAGATGGGCTTTGAGTTCTTTCTGTTCATGTAGCTGCTGCCTTCGCTTTCACATAACTCTGCTGCTACTACTGGGTTCTGCTGTACTTTTTCTTCTTGCTGGATCCATTTCGAGCTTCTTCTTCTTCTTCTGTTGTACAGACGAGGGTTTTGTGAGCTGAGAGCTGGGAAAATGGCGAGCGGCGGCGGCGGATATGGGGATGCGAATCAGAAGATTGATTATGTGTTCAAAGTGGTGTTGATCGGGGACTCTGCGGTGGGTAAATCTCAGATTCTGGCGAGGTTTGCCCGGAACGAGTTCAGCTTGGATTCGAAGGCTACAATCGGTGTGGAGTTCCAGACTAGAACGCTAGTTATTCAGCATAAGAATGTTAAAGCTCAGATCTGGGATACTGCGGGCCAGGAAAGATACAGAGCAGTTACAAGTGCATATTACCGAGGAGCTCTTGGGGCAATGCTTGCGTACGATATTACCAAACGCCAGAGCTTTGATCACATACCTCGTTGGCTTGAGGAGTTGCGGAGCCATGCTGACAAGAACATTGTCATCATCTTAATAGGAAACAAAAGTGATCTTGAAGACCAGCGTGCAGTCTCCACCGACGACGCCAAGGAATTCGCCGAGAAAGAAGGTTTGTTTTTCTTGGAGACCTCGGCTCTTGAATCCACCAATGTGGAGAGTGCCTTCATGACTATCTTAACTGAGATCTTCAACATCATGAACAAAAAGAACCTTGCTGCTGGTGAGAATCAAGGCAATGGCAACTCTGCATCCCTCGCCGGTGGTAAGAAGGTCATTATTCCGGGCCCGGCGCAAGAAATCCCGGCGAAAAGCAAGATCTGTTGTACTTCAACATGATTTGTTTGGAAGTAGGCTGCAATCGGGGGATCTAGGTGGGTTTTTTTTTTTTACTGGTGATGGTTTTCTGCGGTCATTTGTATATTTGATTGTATGCTTTAGTTTATATATTTACTTGAAGGACGGCAAATGAGGTTCTCATATATTTGATTTAATTAGTTTTCTTGGTTTCTTGTTCAAGAGAATTATTAATGTTGTATTTTTTGGATTAAACATCCGATATTATACGTATAAATAGAATTATGAAATGGTTTATCGTA

Coding sequence (CDS)

ATGGCGAGCGGCGGCGGCGGATATGGGGATGCGAATCAGAAGATTGATTATGTGTTCAAAGTGGTGTTGATCGGGGACTCTGCGGTGGGTAAATCTCAGATTCTGGCGAGGTTTGCCCGGAACGAGTTCAGCTTGGATTCGAAGGCTACAATCGGTGTGGAGTTCCAGACTAGAACGCTAGTTATTCAGCATAAGAATGTTAAAGCTCAGATCTGGGATACTGCGGGCCAGGAAAGATACAGAGCAGTTACAAGTGCATATTACCGAGGAGCTCTTGGGGCAATGCTTGCGTACGATATTACCAAACGCCAGAGCTTTGATCACATACCTCGTTGGCTTGAGGAGTTGCGGAGCCATGCTGACAAGAACATTGTCATCATCTTAATAGGAAACAAAAGTGATCTTGAAGACCAGCGTGCAGTCTCCACCGACGACGCCAAGGAATTCGCCGAGAAAGAAGGTTTGTTTTTCTTGGAGACCTCGGCTCTTGAATCCACCAATGTGGAGAGTGCCTTCATGACTATCTTAACTGAGATCTTCAACATCATGAACAAAAAGAACCTTGCTGCTGGTGAGAATCAAGGCAATGGCAACTCTGCATCCCTCGCCGGTGGTAAGAAGGTCATTATTCCGGGCCCGGCGCAAGAAATCCCGGCGAAAAGCAAGATCTGTTGTACTTCAACATGA

Protein sequence

MASGGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKNVKAQIWDTAGQERYRAVTSAYYRGALGAMLAYDITKRQSFDHIPRWLEELRSHADKNIVIILIGNKSDLEDQRAVSTDDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFNIMNKKNLAAGENQGNGNSASLAGGKKVIIPGPAQEIPAKSKICCTST

Homology

[Close]

BLAST of Cp4.1LG19g09890.1 vs. ExPASy Swiss-Prot
Match: Q40191 (Ras-related protein Rab11A OS=Lotus japonicus OX=34305 GN=RAB11A PE=2 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 1.7e-104
Identity = 192/226 (84.96%), Postives = 211/226 (93.36%), Query Frame = 0


Query: 3   SGGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVI 62
           + GGGYGDAN KIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSK+TIGVEFQTRTLVI
Sbjct: 2   ASGGGYGDANAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVI 61

Query: 63  QHKNVKAQIWDTAGQERYRAVTSAYYRGALGAMLAYDITKRQSFDHIPRWLEELRSHADK 122
            HK VKAQIWDTAGQERYRAVTSAYYRGA+GAML YDITKRQ+FDHIPRWLEELR+HADK
Sbjct: 62  DHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADK 121

Query: 123 NIVIILIGNKSDLEDQRAVSTDDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFNI 182
           NIVIILIGNK DL +QR V T+DAKEFAEKEGLFFLETSALE+TNVESAF T+LTEI+NI
Sbjct: 122 NIVIILIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNI 181

Query: 183 MNKKNLAAGENQGNGNSASLAGGKKVIIPGPAQEIPAKSKICCTST 229
           +NKK+LAA E+QGNGNSASL+ G+K+IIPGPAQEIPAK  +CC ++
Sbjct: 182 VNKKSLAADESQGNGNSASLS-GQKIIIPGPAQEIPAKRNMCCQAS 226

[Close]

BLAST of Cp4.1LG19g09890.1 vs. ExPASy Swiss-Prot
Match: Q40522 (Ras-related protein Rab11D OS=Nicotiana tabacum OX=4097 GN=RAB11D PE=2 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 3.5e-102
Identity = 186/221 (84.16%), Postives = 207/221 (93.67%), Query Frame = 0


Query: 7   GYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKN 66
           GYGDA+QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL IQHK+
Sbjct: 4   GYGDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQHKS 63

Query: 67  VKAQIWDTAGQERYRAVTSAYYRGALGAMLAYDITKRQSFDHIPRWLEELRSHADKNIVI 126
           VKAQIWDTAGQERYRAVTSAYYRGA+GAML YDITKRQ+FDHIPRWLEELR+HAD+NIVI
Sbjct: 64  VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVI 123

Query: 127 ILIGNKSDLEDQRAVSTDDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFNIMNKK 186
           +LIGNK+DLEDQRAV T+DAKEFA+KEGLFFLETSA+E+TN+E AF+T+LTEIFNI+NKK
Sbjct: 124 MLIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLTEIFNIVNKK 183

Query: 187 NLAAGENQGNGNSASLAGGKKVIIPGPAQEIPAKSKICCTS 228
           NLAA +NQ NGN ASL  GKK+++PGP Q IP K K CC+S
Sbjct: 184 NLAADDNQSNGNPASLT-GKKILVPGPGQVIPEK-KACCSS 222

[Close]

BLAST of Cp4.1LG19g09890.1 vs. ExPASy Swiss-Prot
Match: Q9FJN8 (Ras-related protein RABA4a OS=Arabidopsis thaliana OX=3702 GN=RABA4A PE=1 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 1.3e-101
Identity = 186/225 (82.67%), Postives = 204/225 (90.67%), Query Frame = 0


Query: 3   SGGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVI 62
           + GGGYGD +QKIDYVFKVVLIGDSAVGKSQILAR+AR+EFSLDSKATIGVEFQTRTLVI
Sbjct: 2   TSGGGYGDPSQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVI 61

Query: 63  QHKNVKAQIWDTAGQERYRAVTSAYYRGALGAMLAYDITKRQSFDHIPRWLEELRSHADK 122
            HK+VKAQIWDTAGQERYRAVTSAYYRGA+GAML YDIT+RQ+FDHIPRWLEELR+HADK
Sbjct: 62  DHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADK 121

Query: 123 NIVIILIGNKSDLEDQRAVSTDDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFNI 182
           NIVIILIGNKSDL DQRA+ T+DAKEFAEKEGLFFLETSA  +TNVESAF T+LTEIFNI
Sbjct: 122 NIVIILIGNKSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNI 181

Query: 183 MNKKNLAAGENQGNGNSASLAGGKKVIIPGPAQEIPAKSKICCTS 228
           +NKK+LAA E+Q NGN  SLAG K  I+PGP Q IP KS +CC S
Sbjct: 182 VNKKSLAASEDQENGNPGSLAGKKIDIVPGPGQVIPNKSNMCCNS 226

[Close]

BLAST of Cp4.1LG19g09890.1 vs. ExPASy Swiss-Prot
Match: Q40520 (Ras-related protein Rab11C OS=Nicotiana tabacum OX=4097 GN=RAB11C PE=2 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 8.6e-101
Identity = 184/221 (83.26%), Postives = 205/221 (92.76%), Query Frame = 0


Query: 7   GYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKN 66
           GYGDA+QKIDYVFKVVLIGDSAVGK+QILARFARNEFSLDSKATIGVEFQTRTLVIQHK+
Sbjct: 4   GYGDASQKIDYVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQHKS 63

Query: 67  VKAQIWDTAGQERYRAVTSAYYRGALGAMLAYDITKRQSFDHIPRWLEELRSHADKNIVI 126
           VKAQIWDTAGQERYRAVTSAYYRGA+GAML YDITKRQ+FDHIPRWLEELR+HAD+NIVI
Sbjct: 64  VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVI 123

Query: 127 ILIGNKSDLEDQRAVSTDDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFNIMNKK 186
           +L GNK+DLEDQRAV T+DAKEFA+KEGLFFLETSA+E+T +E AF+T+LTEIFNI+NKK
Sbjct: 124 MLTGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFLTVLTEIFNIVNKK 183

Query: 187 NLAAGENQGNGNSASLAGGKKVIIPGPAQEIPAKSKICCTS 228
           NLAA ENQ N N ASL  GKK+++PGP Q IP K K CC+S
Sbjct: 184 NLAADENQSNSNPASLT-GKKILVPGPGQVIPGK-KACCSS 222

[Close]

BLAST of Cp4.1LG19g09890.1 vs. ExPASy Swiss-Prot
Match: Q9SMQ6 (Ras-related protein RABA4b OS=Arabidopsis thaliana OX=3702 GN=RABA4B PE=1 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 1.1e-95
Identity = 172/226 (76.11%), Postives = 204/226 (90.27%), Query Frame = 0


Query: 3   SGGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVI 62
           +GGGGYG A+ K+DYVFKVVLIGDSAVGKSQ+LARFAR+EFS+DSKATIGVEFQTRTL I
Sbjct: 2   AGGGGYGGASGKVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSI 61

Query: 63  QHKNVKAQIWDTAGQERYRAVTSAYYRGALGAMLAYDITKRQSFDHIPRWLEELRSHADK 122
           + K++KAQIWDTAGQERYRAVTSAYYRGA+GAML YD+TKR++F+HIPRWLEELR+HADK
Sbjct: 62  EQKSIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADK 121

Query: 123 NIVIILIGNKSDLEDQRAVSTDDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFNI 182
           NIVIILIGNKSDLEDQRAV T+DAKEFAEKEGLFFLETSAL +TNVE++F T++T+I+N 
Sbjct: 122 NIVIILIGNKSDLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNT 181

Query: 183 MNKKNLAAGENQGNGNSASLAGGKKVIIPGPAQEIPAKSKICCTST 229
           +NKKNLA   ++G+ N+     GKK++IPG  QEIPAK+  CCTS+
Sbjct: 182 VNKKNLA---SEGDSNNPGSLAGKKILIPGSGQEIPAKTSTCCTSS 224

[Close]

BLAST of Cp4.1LG19g09890.1 vs. NCBI nr
Match: XP_023518909.1 (ras-related protein Rab11A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 443 bits (1140), Expect = 9.28e-157
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0


Query: 1   MASGGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL 60
           MASGGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL
Sbjct: 1   MASGGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL 60

Query: 61  VIQHKNVKAQIWDTAGQERYRAVTSAYYRGALGAMLAYDITKRQSFDHIPRWLEELRSHA 120
           VIQHKNVKAQIWDTAGQERYRAVTSAYYRGALGAMLAYDITKRQSFDHIPRWLEELRSHA
Sbjct: 61  VIQHKNVKAQIWDTAGQERYRAVTSAYYRGALGAMLAYDITKRQSFDHIPRWLEELRSHA 120

Query: 121 DKNIVIILIGNKSDLEDQRAVSTDDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIF 180
           DKNIVIILIGNKSDLEDQRAVSTDDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIF
Sbjct: 121 DKNIVIILIGNKSDLEDQRAVSTDDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIF 180

Query: 181 NIMNKKNLAAGENQGNGNSASLAGGKKVIIPGPAQEIPAKSKICCTST 228
           NIMNKKNLAAGENQGNGNSASLAGGKKVIIPGPAQEIPAKSKICCTST
Sbjct: 181 NIMNKKNLAAGENQGNGNSASLAGGKKVIIPGPAQEIPAKSKICCTST 228

[Close]

BLAST of Cp4.1LG19g09890.1 vs. NCBI nr
Match: XP_022962973.1 (ras-related protein Rab11A-like [Cucurbita moschata] >KAG7026855.1 Ras-related protein Rab11A [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 434 bits (1115), Expect = 5.79e-153
Identity = 225/228 (98.68%), Postives = 227/228 (99.56%), Query Frame = 0


Query: 1   MASGGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL 60
           MASGGG YGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL
Sbjct: 1   MASGGG-YGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL 60

Query: 61  VIQHKNVKAQIWDTAGQERYRAVTSAYYRGALGAMLAYDITKRQSFDHIPRWLEELRSHA 120
           VIQHK+VKAQIWDTAGQERYRAVTSAYYRGALGAMLAYDITKRQSFDHIPRWLEELRSHA
Sbjct: 61  VIQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLAYDITKRQSFDHIPRWLEELRSHA 120

Query: 121 DKNIVIILIGNKSDLEDQRAVSTDDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIF 180
           DKNIVIILIGNKSDLEDQRAVSTDDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIF
Sbjct: 121 DKNIVIILIGNKSDLEDQRAVSTDDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIF 180

Query: 181 NIMNKKNLAAGENQGNGNSASLAGGKKVIIPGPAQEIPAKSKICCTST 228
           NIMNKKNLAAGENQGNGNSASLAGGKKVIIPGPAQEIPAKSK+CCTST
Sbjct: 181 NIMNKKNLAAGENQGNGNSASLAGGKKVIIPGPAQEIPAKSKMCCTST 227

[Close]

BLAST of Cp4.1LG19g09890.1 vs. NCBI nr
Match: XP_023003097.1 (ras-related protein Rab11A-like [Cucurbita maxima])

HSP 1 Score: 432 bits (1111), Expect = 2.36e-152
Identity = 224/228 (98.25%), Postives = 226/228 (99.12%), Query Frame = 0


Query: 1   MASGGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL 60
           MASGGG YGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL
Sbjct: 1   MASGGG-YGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL 60

Query: 61  VIQHKNVKAQIWDTAGQERYRAVTSAYYRGALGAMLAYDITKRQSFDHIPRWLEELRSHA 120
           VIQHK+VKAQIWDTAGQERYRAVTSAYYRGALGAMLAYDITKRQSFDHIPRWLEELRSHA
Sbjct: 61  VIQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLAYDITKRQSFDHIPRWLEELRSHA 120

Query: 121 DKNIVIILIGNKSDLEDQRAVSTDDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIF 180
           DKNIVIILIGNKSDLEDQRAVSTDDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIF
Sbjct: 121 DKNIVIILIGNKSDLEDQRAVSTDDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIF 180

Query: 181 NIMNKKNLAAGENQGNGNSASLAGGKKVIIPGPAQEIPAKSKICCTST 228
           NIMNKKNLAAGENQGNGNSASLAGGKKVIIPGPAQEIP KSK+CCTST
Sbjct: 181 NIMNKKNLAAGENQGNGNSASLAGGKKVIIPGPAQEIPTKSKMCCTST 227

[Close]

BLAST of Cp4.1LG19g09890.1 vs. NCBI nr
Match: XP_022950001.1 (ras-related protein Rab11A [Cucurbita moschata] >XP_023543672.1 ras-related protein Rab11A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 427 bits (1097), Expect = 3.21e-150
Identity = 220/228 (96.49%), Postives = 225/228 (98.68%), Query Frame = 0


Query: 1   MASGGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL 60
           MASGGG YGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL
Sbjct: 1   MASGGG-YGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL 60

Query: 61  VIQHKNVKAQIWDTAGQERYRAVTSAYYRGALGAMLAYDITKRQSFDHIPRWLEELRSHA 120
           VIQHK+VKAQIWDTAGQERYRAVTSAYYRGALGAML YDITKRQ+FDHIPRWLEELRSHA
Sbjct: 61  VIQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHA 120

Query: 121 DKNIVIILIGNKSDLEDQRAVSTDDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIF 180
           DKNIVIILIGNKSDLEDQRAVST+DAKEFAEKEGLFFLETSALESTNVESAFMTILTEIF
Sbjct: 121 DKNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIF 180

Query: 181 NIMNKKNLAAGENQGNGNSASLAGGKKVIIPGPAQEIPAKSKICCTST 228
           NIMNKKNLAAGE QGNGNSASLAGGKK+IIPGPAQEIPAKSK+CCTST
Sbjct: 181 NIMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPAKSKMCCTST 227

[Close]

BLAST of Cp4.1LG19g09890.1 vs. NCBI nr
Match: XP_022978553.1 (ras-related protein Rab11A [Cucurbita maxima])

HSP 1 Score: 426 bits (1096), Expect = 4.57e-150
Identity = 219/228 (96.05%), Postives = 225/228 (98.68%), Query Frame = 0


Query: 1   MASGGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL 60
           MASGGG YGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL
Sbjct: 1   MASGGG-YGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL 60

Query: 61  VIQHKNVKAQIWDTAGQERYRAVTSAYYRGALGAMLAYDITKRQSFDHIPRWLEELRSHA 120
           VIQHK+VKAQIWDTAGQERYRAVTSAYYRGALGAML YDITKRQ+FDHIPRWLEELRSHA
Sbjct: 61  VIQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHA 120

Query: 121 DKNIVIILIGNKSDLEDQRAVSTDDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIF 180
           DKNIVIILIGNKSDLEDQRAVST+DAKEFAEKEGLFFLETSALESTNVESAFMT+LTEIF
Sbjct: 121 DKNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTVLTEIF 180

Query: 181 NIMNKKNLAAGENQGNGNSASLAGGKKVIIPGPAQEIPAKSKICCTST 228
           NIMNKKNLAAGE QGNGNSASLAGGKK+IIPGPAQEIPAKSK+CCTST
Sbjct: 181 NIMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPAKSKMCCTST 227

[Close]

BLAST of Cp4.1LG19g09890.1 vs. ExPASy TrEMBL
Match: A0A6J1HGC7 (ras-related protein Rab11A-like OS=Cucurbita moschata OX=3662 GN=LOC111463323 PE=4 SV=1)

HSP 1 Score: 434 bits (1115), Expect = 2.81e-153
Identity = 225/228 (98.68%), Postives = 227/228 (99.56%), Query Frame = 0


Query: 1   MASGGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL 60
           MASGGG YGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL
Sbjct: 1   MASGGG-YGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL 60

Query: 61  VIQHKNVKAQIWDTAGQERYRAVTSAYYRGALGAMLAYDITKRQSFDHIPRWLEELRSHA 120
           VIQHK+VKAQIWDTAGQERYRAVTSAYYRGALGAMLAYDITKRQSFDHIPRWLEELRSHA
Sbjct: 61  VIQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLAYDITKRQSFDHIPRWLEELRSHA 120

Query: 121 DKNIVIILIGNKSDLEDQRAVSTDDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIF 180
           DKNIVIILIGNKSDLEDQRAVSTDDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIF
Sbjct: 121 DKNIVIILIGNKSDLEDQRAVSTDDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIF 180

Query: 181 NIMNKKNLAAGENQGNGNSASLAGGKKVIIPGPAQEIPAKSKICCTST 228
           NIMNKKNLAAGENQGNGNSASLAGGKKVIIPGPAQEIPAKSK+CCTST
Sbjct: 181 NIMNKKNLAAGENQGNGNSASLAGGKKVIIPGPAQEIPAKSKMCCTST 227

[Close]

BLAST of Cp4.1LG19g09890.1 vs. ExPASy TrEMBL
Match: A0A6J1KLG6 (ras-related protein Rab11A-like OS=Cucurbita maxima OX=3661 GN=LOC111496809 PE=4 SV=1)

HSP 1 Score: 432 bits (1111), Expect = 1.14e-152
Identity = 224/228 (98.25%), Postives = 226/228 (99.12%), Query Frame = 0


Query: 1   MASGGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL 60
           MASGGG YGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL
Sbjct: 1   MASGGG-YGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL 60

Query: 61  VIQHKNVKAQIWDTAGQERYRAVTSAYYRGALGAMLAYDITKRQSFDHIPRWLEELRSHA 120
           VIQHK+VKAQIWDTAGQERYRAVTSAYYRGALGAMLAYDITKRQSFDHIPRWLEELRSHA
Sbjct: 61  VIQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLAYDITKRQSFDHIPRWLEELRSHA 120

Query: 121 DKNIVIILIGNKSDLEDQRAVSTDDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIF 180
           DKNIVIILIGNKSDLEDQRAVSTDDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIF
Sbjct: 121 DKNIVIILIGNKSDLEDQRAVSTDDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIF 180

Query: 181 NIMNKKNLAAGENQGNGNSASLAGGKKVIIPGPAQEIPAKSKICCTST 228
           NIMNKKNLAAGENQGNGNSASLAGGKKVIIPGPAQEIP KSK+CCTST
Sbjct: 181 NIMNKKNLAAGENQGNGNSASLAGGKKVIIPGPAQEIPTKSKMCCTST 227

[Close]

BLAST of Cp4.1LG19g09890.1 vs. ExPASy TrEMBL
Match: A0A6J1GDL8 (ras-related protein Rab11A OS=Cucurbita moschata OX=3662 GN=LOC111453225 PE=4 SV=1)

HSP 1 Score: 427 bits (1097), Expect = 1.56e-150
Identity = 220/228 (96.49%), Postives = 225/228 (98.68%), Query Frame = 0


Query: 1   MASGGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL 60
           MASGGG YGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL
Sbjct: 1   MASGGG-YGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL 60

Query: 61  VIQHKNVKAQIWDTAGQERYRAVTSAYYRGALGAMLAYDITKRQSFDHIPRWLEELRSHA 120
           VIQHK+VKAQIWDTAGQERYRAVTSAYYRGALGAML YDITKRQ+FDHIPRWLEELRSHA
Sbjct: 61  VIQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHA 120

Query: 121 DKNIVIILIGNKSDLEDQRAVSTDDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIF 180
           DKNIVIILIGNKSDLEDQRAVST+DAKEFAEKEGLFFLETSALESTNVESAFMTILTEIF
Sbjct: 121 DKNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIF 180

Query: 181 NIMNKKNLAAGENQGNGNSASLAGGKKVIIPGPAQEIPAKSKICCTST 228
           NIMNKKNLAAGE QGNGNSASLAGGKK+IIPGPAQEIPAKSK+CCTST
Sbjct: 181 NIMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPAKSKMCCTST 227

[Close]

BLAST of Cp4.1LG19g09890.1 vs. ExPASy TrEMBL
Match: A0A6J1ITG2 (ras-related protein Rab11A OS=Cucurbita maxima OX=3661 GN=LOC111478500 PE=4 SV=1)

HSP 1 Score: 426 bits (1096), Expect = 2.21e-150
Identity = 219/228 (96.05%), Postives = 225/228 (98.68%), Query Frame = 0


Query: 1   MASGGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL 60
           MASGGG YGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL
Sbjct: 1   MASGGG-YGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL 60

Query: 61  VIQHKNVKAQIWDTAGQERYRAVTSAYYRGALGAMLAYDITKRQSFDHIPRWLEELRSHA 120
           VIQHK+VKAQIWDTAGQERYRAVTSAYYRGALGAML YDITKRQ+FDHIPRWLEELRSHA
Sbjct: 61  VIQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHA 120

Query: 121 DKNIVIILIGNKSDLEDQRAVSTDDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIF 180
           DKNIVIILIGNKSDLEDQRAVST+DAKEFAEKEGLFFLETSALESTNVESAFMT+LTEIF
Sbjct: 121 DKNIVIILIGNKSDLEDQRAVSTEDAKEFAEKEGLFFLETSALESTNVESAFMTVLTEIF 180

Query: 181 NIMNKKNLAAGENQGNGNSASLAGGKKVIIPGPAQEIPAKSKICCTST 228
           NIMNKKNLAAGE QGNGNSASLAGGKK+IIPGPAQEIPAKSK+CCTST
Sbjct: 181 NIMNKKNLAAGETQGNGNSASLAGGKKIIIPGPAQEIPAKSKMCCTST 227

[Close]

BLAST of Cp4.1LG19g09890.1 vs. ExPASy TrEMBL
Match: A0A1S3B108 (ras-related protein Rab11A OS=Cucumis melo OX=3656 GN=LOC103484955 PE=4 SV=1)

HSP 1 Score: 421 bits (1082), Expect = 3.01e-148
Identity = 215/228 (94.30%), Postives = 225/228 (98.68%), Query Frame = 0


Query: 1   MASGGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL 60
           MASGGG YGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL
Sbjct: 1   MASGGG-YGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTL 60

Query: 61  VIQHKNVKAQIWDTAGQERYRAVTSAYYRGALGAMLAYDITKRQSFDHIPRWLEELRSHA 120
           VIQHK+VKAQIWDTAGQERYRAVTSAYYRGALGAML YDITKRQ+FDHIPRWLEELRSHA
Sbjct: 61  VIQHKSVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHA 120

Query: 121 DKNIVIILIGNKSDLEDQRAVSTDDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIF 180
           DKNIVIILIGNKSDLEDQRAV T+DAKEFAEKEGLFFLETSALESTNVE+AFMT+LTEIF
Sbjct: 121 DKNIVIILIGNKSDLEDQRAVPTEDAKEFAEKEGLFFLETSALESTNVENAFMTVLTEIF 180

Query: 181 NIMNKKNLAAGENQGNGNSASLAGGKKVIIPGPAQEIPAKSKICCTST 228
           +IMN+KNLAAGENQGNGNSASLAGGKK+IIPGPAQEIPAKSK+CC+ST
Sbjct: 181 SIMNRKNLAAGENQGNGNSASLAGGKKIIIPGPAQEIPAKSKMCCSST 227

[Close]

BLAST of Cp4.1LG19g09890.1 vs. TAIR 10
Match: AT5G65270.1 (RAB GTPase homolog A4A )

HSP 1 Score: 370.5 bits (950), Expect = 9.4e-103
Identity = 186/225 (82.67%), Postives = 204/225 (90.67%), Query Frame = 0


Query: 3   SGGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVI 62
           + GGGYGD +QKIDYVFKVVLIGDSAVGKSQILAR+AR+EFSLDSKATIGVEFQTRTLVI
Sbjct: 2   TSGGGYGDPSQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVI 61

Query: 63  QHKNVKAQIWDTAGQERYRAVTSAYYRGALGAMLAYDITKRQSFDHIPRWLEELRSHADK 122
            HK+VKAQIWDTAGQERYRAVTSAYYRGA+GAML YDIT+RQ+FDHIPRWLEELR+HADK
Sbjct: 62  DHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADK 121

Query: 123 NIVIILIGNKSDLEDQRAVSTDDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFNI 182
           NIVIILIGNKSDL DQRA+ T+DAKEFAEKEGLFFLETSA  +TNVESAF T+LTEIFNI
Sbjct: 122 NIVIILIGNKSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNI 181

Query: 183 MNKKNLAAGENQGNGNSASLAGGKKVIIPGPAQEIPAKSKICCTS 228
           +NKK+LAA E+Q NGN  SLAG K  I+PGP Q IP KS +CC S
Sbjct: 182 VNKKSLAASEDQENGNPGSLAGKKIDIVPGPGQVIPNKSNMCCNS 226

[Close]

BLAST of Cp4.1LG19g09890.1 vs. TAIR 10
Match: AT4G39990.1 (RAB GTPase homolog A4B )

HSP 1 Score: 350.9 bits (899), Expect = 7.7e-97
Identity = 172/226 (76.11%), Postives = 204/226 (90.27%), Query Frame = 0


Query: 3   SGGGGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVI 62
           +GGGGYG A+ K+DYVFKVVLIGDSAVGKSQ+LARFAR+EFS+DSKATIGVEFQTRTL I
Sbjct: 2   AGGGGYGGASGKVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSI 61

Query: 63  QHKNVKAQIWDTAGQERYRAVTSAYYRGALGAMLAYDITKRQSFDHIPRWLEELRSHADK 122
           + K++KAQIWDTAGQERYRAVTSAYYRGA+GAML YD+TKR++F+HIPRWLEELR+HADK
Sbjct: 62  EQKSIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADK 121

Query: 123 NIVIILIGNKSDLEDQRAVSTDDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFNI 182
           NIVIILIGNKSDLEDQRAV T+DAKEFAEKEGLFFLETSAL +TNVE++F T++T+I+N 
Sbjct: 122 NIVIILIGNKSDLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNT 181

Query: 183 MNKKNLAAGENQGNGNSASLAGGKKVIIPGPAQEIPAKSKICCTST 229
           +NKKNLA   ++G+ N+     GKK++IPG  QEIPAK+  CCTS+
Sbjct: 182 VNKKNLA---SEGDSNNPGSLAGKKILIPGSGQEIPAKTSTCCTSS 224

[Close]

BLAST of Cp4.1LG19g09890.1 vs. TAIR 10
Match: AT3G12160.1 (RAB GTPase homolog A4D )

HSP 1 Score: 312.4 bits (799), Expect = 3.0e-85
Identity = 159/218 (72.94%), Postives = 189/218 (86.70%), Query Frame = 0


Query: 8   YGDANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKNV 67
           YGD NQKIDYVFKVVLIGDSAVGK+Q+LARFARNEFS+DSKATIGVEFQT+TLVI +K V
Sbjct: 5   YGDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTV 64

Query: 68  KAQIWDTAGQERYRAVTSAYYRGALGAMLAYDITKRQSFDHIPRWLEELRSHADKNIVII 127
           KAQIWDTAGQERYRAVTSAYYRGA+GAML YD+TKRQSFDH+ +WLEELR HADKNIVI+
Sbjct: 65  KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVIM 124

Query: 128 LIGNKSDLEDQRAVSTDDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFNIMNKKN 187
           LIGNK DL   RAV T+DA+EFA++E LFF+ETSALE+TNVE+AF+TILTEI+ I++KK+
Sbjct: 125 LIGNKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRIISKKS 184

Query: 188 LAAGENQGNGNSASLAGGKKVIIPGPAQEIPAKSKICC 226
           L A ++  +GNS SL  G ++II  P+++   K   CC
Sbjct: 185 LTADDDDADGNS-SLLKGTRIII--PSEQESGKRGGCC 219

[Close]

BLAST of Cp4.1LG19g09890.1 vs. TAIR 10
Match: AT5G47960.1 (RAB GTPase homolog A4C )

HSP 1 Score: 310.8 bits (795), Expect = 8.8e-85
Identity = 155/214 (72.43%), Postives = 182/214 (85.05%), Query Frame = 0


Query: 12  NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKNVKAQI 71
           NQKIDYVFKVVLIGDSAVGKSQ+LARF+RNEFS++SKATIGVEFQTRTL I  K +KAQI
Sbjct: 9   NQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKTIKAQI 68

Query: 72  WDTAGQERYRAVTSAYYRGALGAMLAYDITKRQSFDHIPRWLEELRSHADKNIVIILIGN 131
           WDTAGQERYRAVTSAYYRGA+GAML YDITKRQSFDH+ RWLEELR HADKNIVI+LIGN
Sbjct: 69  WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGN 128

Query: 132 KSDLEDQRAVSTDDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFNIMNKKNLAAG 191
           K+DL   RAV T+DAKEFA++E LFF+ETSAL+S NVE +F+T+LTEI+ I++KKNL A 
Sbjct: 129 KTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIVSKKNLVAN 188

Query: 192 ENQGNGNSASLAGGKKVIIPGPAQEIPAKSKICC 226
           E   +G  +SL  G K+++ G  +E  +K K CC
Sbjct: 189 EEGESGGDSSLLQGTKIVVAG--EETESKGKGCC 220

[Close]

BLAST of Cp4.1LG19g09890.1 vs. TAIR 10
Match: AT1G07410.1 (RAB GTPase homolog A2B )

HSP 1 Score: 258.1 bits (658), Expect = 6.8e-69
Identity = 126/185 (68.11%), Postives = 155/185 (83.78%), Query Frame = 0


Query: 12  NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKNVKAQI 71
           + + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K VKAQI
Sbjct: 6   DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65

Query: 72  WDTAGQERYRAVTSAYYRGALGAMLAYDITKRQSFDHIPRWLEELRSHADKNIVIILIGN 131
           WDTAGQERYRA+TSAYYRGA+GA+L YDITKRQ+F+++ RWL ELR HAD NIVI++ GN
Sbjct: 66  WDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVIMMAGN 125

Query: 132 KSDLEDQRAVSTDDAKEFAEKEGLFFLETSALESTNVESAFMTILTEIFNIMNKKNLAAG 191
           KSDL   R+V+ +D +  AEKEGL FLETSALE+TN+E AF TIL+EI++I++KK LAA 
Sbjct: 126 KSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKKALAAQ 185

Query: 192 ENQGN 197
           E  GN
Sbjct: 186 EAAGN 190

The following BLAST results are available for this feature:

BLAST of Cp4.1LG19g09890.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40191	1.7e-104	84.96	Ras-related protein Rab11A OS=Lotus japonicus OX=34305 GN=RAB11A PE=2 SV=1	[more]
Q40522	3.5e-102	84.16	Ras-related protein Rab11D OS=Nicotiana tabacum OX=4097 GN=RAB11D PE=2 SV=1	[more]
Q9FJN8	1.3e-101	82.67	Ras-related protein RABA4a OS=Arabidopsis thaliana OX=3702 GN=RABA4A PE=1 SV=1	[more]
Q40520	8.6e-101	83.26	Ras-related protein Rab11C OS=Nicotiana tabacum OX=4097 GN=RAB11C PE=2 SV=1	[more]
Q9SMQ6	1.1e-95	76.11	Ras-related protein RABA4b OS=Arabidopsis thaliana OX=3702 GN=RABA4B PE=1 SV=1	[more]

BLAST of Cp4.1LG19g09890.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023518909.1	9.28e-157	100.00	ras-related protein Rab11A-like [Cucurbita pepo subsp. pepo]	[more]
XP_022962973.1	5.79e-153	98.68	ras-related protein Rab11A-like [Cucurbita moschata] >KAG7026855.1 Ras-related p...	[more]
XP_023003097.1	2.36e-152	98.25	ras-related protein Rab11A-like [Cucurbita maxima]	[more]
XP_022950001.1	3.21e-150	96.49	ras-related protein Rab11A [Cucurbita moschata] >XP_023543672.1 ras-related prot...	[more]
XP_022978553.1	4.57e-150	96.05	ras-related protein Rab11A [Cucurbita maxima]	[more]

BLAST of Cp4.1LG19g09890.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HGC7	2.81e-153	98.68	ras-related protein Rab11A-like OS=Cucurbita moschata OX=3662 GN=LOC111463323 PE...	[more]
A0A6J1KLG6	1.14e-152	98.25	ras-related protein Rab11A-like OS=Cucurbita maxima OX=3661 GN=LOC111496809 PE=4...	[more]
A0A6J1GDL8	1.56e-150	96.49	ras-related protein Rab11A OS=Cucurbita moschata OX=3662 GN=LOC111453225 PE=4 SV...	[more]
A0A6J1ITG2	2.21e-150	96.05	ras-related protein Rab11A OS=Cucurbita maxima OX=3661 GN=LOC111478500 PE=4 SV=1	[more]
A0A1S3B108	3.01e-148	94.30	ras-related protein Rab11A OS=Cucumis melo OX=3656 GN=LOC103484955 PE=4 SV=1	[more]

BLAST of Cp4.1LG19g09890.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65270.1	9.4e-103	82.67	RAB GTPase homolog A4A	[more]
AT4G39990.1	7.7e-97	76.11	RAB GTPase homolog A4B	[more]
AT3G12160.1	3.0e-85	72.94	RAB GTPase homolog A4D	[more]
AT5G47960.1	8.8e-85	72.43	RAB GTPase homolog A4C	[more]
AT1G07410.1	6.8e-69	68.11	RAB GTPase homolog A2B	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 19..40 score: 48.98 coord: 60..82 score: 49.91 coord: 157..179 score: 43.17 coord: 42..58 score: 35.04 coord: 122..135 score: 51.71
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 5..186 e-value: 0.0049 score: -0.6
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 16..182 e-value: 3.6E-24 score: 96.3
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 19..182 e-value: 2.0E-105 score: 366.2
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 24..223 e-value: 1.5E-6 score: 37.8
None	No IPR available	PANTHER	PTHR47978:SF15	RAB GTPASE-LIKE PROTEIN A1D	coord: 1..227
None	No IPR available	PANTHER	PTHR47978	FAMILY NOT NAMED	coord: 1..227
None	No IPR available	PROSITE	PS51420	RHO	coord: 12..183 score: 9.107821
None	No IPR available	PROSITE	PS51419	RAB	coord: 14..224 score: 35.625038
None	No IPR available	CDD	cd01868	Rab11_like	coord: 16..180 e-value: 1.65078E-120 score: 337.61
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 21..178 e-value: 1.5E-10 score: 15.9
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 20..180 e-value: 1.4E-61 score: 206.8
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 11..210 score: 16.534624
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 18..175 e-value: 2.6E-35 score: 119.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 11..207 e-value: 7.4E-70 score: 236.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 14..188

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG19g09890	Cp4.1LG19g09890	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG19g09890.1:three_prime_utr:001	Cp4.1LG19g09890.1:three_prime_utr:001	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG19g09890.1:exon:002	Cp4.1LG19g09890.1:exon:002	exon
Cp4.1LG19g09890.1:exon:001	Cp4.1LG19g09890.1:exon:001	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG19g09890.1:cds:002	Cp4.1LG19g09890.1:cds:002	CDS
Cp4.1LG19g09890.1:cds:001	Cp4.1LG19g09890.1:cds:001	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG19g09890.1:five_prime_utr:001	Cp4.1LG19g09890.1:five_prime_utr:001	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG19g09890.1	Cp4.1LG19g09890.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005768	endosome
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding