Cp4.1LG18g08300.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG18g08300.1
TypemRNA
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionDUF4228 domain-containing protein
LocationCp4.1LG18: 7687038 .. 7689257 (-)
Sequence length1355
RNA-Seq ExpressionCp4.1LG18g08300.1
SyntenyCp4.1LG18g08300.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAAGAACACACTTTTTTAATTTTCTTTGAATGAACACAGTTTGGCTCCAAATTCAAGAGCCAGAGCGTGGCAACTATTTCTGTCACATCTTACAACCACAATGATATTGGCAAATGCCTGCCAAAGATGTTGCACAAACGTGTTCTGTAAACGCCATTTGCAAATCCTCTTATTACGCTTCACGATTGATTATTATCGGTAAGCTTTCTATTTTCAATCGATTTCTTCTTCTTTCCGTCCATTATAAAATTAGGGTTTCATTTATTCCGATCGATTAAACAATCCCAACAATGGTTGCTGATTATAATGTATAAGAAAACCCTATAAGTAGTCGAAGAACCAAAAGAAGAACAAGAAGAAGCTTATCGGGCAGTGAGTCTGAGTTAAATGGAAGCTTTAGTGAAAAGGGTAAACTTCCTTTTCGAAAGGGAAATGGTTTTTAAAGAAAAAGAAGAACCCCCTTTGATGGGACACCACTCATTATACTGTTGCTTAGGGTTTGTTTGTTTGGTTGTTTGGCTGTTTCATTCTTGGATCTATGGAATTTATGAACTCATCTCTTATTGCTGGATTAAGATTTGTTGTATCCTTTTGAAAGAAAATGGTTTAATGGATTGGATTTTGAGGTGCCCACAAGATTTTTCACCTCCAATTCTGTTCTGTTTCTTGTGGGCTACTTGAAAACTACTCCCAGTTGTGTAATCCAAGGAAATGTTTGACATTTTCTGAGGAAAATTTTGTCTTGTTTGTGGTCCTGTTGGAATCATTACTTTGAGAGTATGACATTCAAATTTATTGATATTCATTTATTCTTTTCCATTTACAAAGTGGTGGTATTCATCATGTAATGTACATATCAAGAGTTGAAGCTGTAATTTCACCTTTGGAACCAGATCCCCTGTTCTTCCACCCACCCAATCATAGCTCAACACCTCATATCTTGTTGGATAATCTTGCCCCTCTTTACCCCAAGGTGTATTAAACTGATAAGAATTTAAGGCTGCTGGTGAATGAGTGTCTGTTGTGGCTATAAAAAAGAGATTGGTCCTCTCTTCATAGCCTCCCCTCTTGCTTACCATTAGAGAGAGAGAGAGAGAGCGGAGAGACTGGCGGAGAGATGGGGAATTGCCAAGCCATTGATGCGGCAACACTTGTGATACAACACCCAGGTGGGAAAGTGGACAAATTGTATTGGCCTGTGACGGCTAGAGAGATTATGAAGATGAATCCTGGTCACTATGTGGCTCTTCTCATCTCTACTGCCATGTTTACTCCAAATGAAAGTAATAACAATAGTGAAACCACCAGTAATTCGGTTCGTTTAACTCGAATCAAGCTTCTCCGCCCGGCTGACATGCTTGTTCTTGGCCAAGTTTACAGGCTCATCACTTCTCAAGGTCAGTTTTATCATATCCAACACATAAAGTTCTTGAAATCTCTTAATTTTATAGGCTTAACTTGAATTAATGGCTTCATTTTGTTTGTGAGTATCAGAGGTTATGAGAGGCTTATCAGCAAAGAAACAAGCAAAGGTTAAACAAAACCAGTTAGAAGCAGCAGAGAAGCCAGAGAGGAGGAAAGAACATCCGCCCCGACGTTCCGATGCAGCAGCAGCTGGAAGATCTGTCTCTGATCAAGATCCTGTTCAGGTGAATTTCTAACCCCAAAAAAACATAATTTTGAAGGAAGTTCTTTGACAAACGAACTGCATAACTGTTGTAGGCGACGAAACACGAGAAGAACAACGGACCGAGGACAAGTACATCGACGACAACCTCGGCCACGGCCCGATCAAGAACATGGCAACCTTCATTACATAGCATCTCAGAAGGTGGAAGCTAATCATTTATGTTCCCTATTCCCACATGCTATTGAGAGACAGGGTGGCACAGATTGTGGTATAAGTTGGTGATAATGATATTAGAGTGGTGGCTGTAAAAGAGTTGTTTGAAACTGTGCATAGGAAAGGGAAAGCAGGGTGGGTAATATTATATAGTGTAAGGAGTTAAGATTCTTCAAACATCTCTGTAAATCCAAAGTCATTTTCAGTAATGAAATATGGGACTTCAGCAAAAGAACAGAGCTCAGTTTTTTTTTACCATTCTGATTTACTGTTTTATCTGTTCATAGTTTCATCTGCTTTAGCATACCATTTGCTTCAAAGCTTACAACTCAGGAGGAACACAGTTGAGATGATGTTGATTTGAATCTCTGTCATC

mRNA sequence

TGAAGAACACACTTTTTTAATTTTCTTTGAATGAACACAGTTTGGCTCCAAATTCAAGAGCCAGAGCGTGGCAACTATTTCTGTCACATCTTACAACCACAATGATATTGGCAAATGCCTGCCAAAGATGTTGCACAAACGTGTTCTGTAAACGCCATTTGCAAATCCTCTTATTACGCTTCACGATTGATTATTATCGATCCCCTGTTCTTCCACCCACCCAATCATAGCTCAACACCTCATATCTTGTTGGATAATCTTGCCCCTCTTTACCCCAAGGTGTATTAAACTGATAAGAATTTAAGGCTGCTGGTGAATGAGTGTCTGTTGTGGCTATAAAAAAGAGATTGGTCCTCTCTTCATAGCCTCCCCTCTTGCTTACCATTAGAGAGAGAGAGAGAGAGCGGAGAGACTGGCGGAGAGATGGGGAATTGCCAAGCCATTGATGCGGCAACACTTGTGATACAACACCCAGGTGGGAAAGTGGACAAATTGTATTGGCCTGTGACGGCTAGAGAGATTATGAAGATGAATCCTGGTCACTATGTGGCTCTTCTCATCTCTACTGCCATGTTTACTCCAAATGAAAGTAATAACAATAGTGAAACCACCAGTAATTCGGTTCGTTTAACTCGAATCAAGCTTCTCCGCCCGGCTGACATGCTTGTTCTTGGCCAAGTTTACAGGCTCATCACTTCTCAAGAGGTTATGAGAGGCTTATCAGCAAAGAAACAAGCAAAGGTTAAACAAAACCAGTTAGAAGCAGCAGAGAAGCCAGAGAGGAGGAAAGAACATCCGCCCCGACGTTCCGATGCAGCAGCAGCTGGAAGATCTGTCTCTGATCAAGATCCTGTTCAGGCGACGAAACACGAGAAGAACAACGGACCGAGGACAAGTACATCGACGACAACCTCGGCCACGGCCCGATCAAGAACATGGCAACCTTCATTACATAGCATCTCAGAAGGTGGAAGCTAATCATTTATGTTCCCTATTCCCACATGCTATTGAGAGACAGGGTGGCACAGATTGTGGTATAAGTTGGTGATAATGATATTAGAGTGGTGGCTGTAAAAGAGTTGTTTGAAACTGTGCATAGGAAAGGGAAAGCAGGGTGGGTAATATTATATAGTGTAAGGAGTTAAGATTCTTCAAACATCTCTGTAAATCCAAAGTCATTTTCAGTAATGAAATATGGGACTTCAGCAAAAGAACAGAGCTCAGTTTTTTTTTACCATTCTGATTTACTGTTTTATCTGTTCATAGTTTCATCTGCTTTAGCATACCATTTGCTTCAAAGCTTACAACTCAGGAGGAACACAGTTGAGATGATGTTGATTTGAATCTCTGTCATC

Coding sequence (CDS)

ATGGGGAATTGCCAAGCCATTGATGCGGCAACACTTGTGATACAACACCCAGGTGGGAAAGTGGACAAATTGTATTGGCCTGTGACGGCTAGAGAGATTATGAAGATGAATCCTGGTCACTATGTGGCTCTTCTCATCTCTACTGCCATGTTTACTCCAAATGAAAGTAATAACAATAGTGAAACCACCAGTAATTCGGTTCGTTTAACTCGAATCAAGCTTCTCCGCCCGGCTGACATGCTTGTTCTTGGCCAAGTTTACAGGCTCATCACTTCTCAAGAGGTTATGAGAGGCTTATCAGCAAAGAAACAAGCAAAGGTTAAACAAAACCAGTTAGAAGCAGCAGAGAAGCCAGAGAGGAGGAAAGAACATCCGCCCCGACGTTCCGATGCAGCAGCAGCTGGAAGATCTGTCTCTGATCAAGATCCTGTTCAGGCGACGAAACACGAGAAGAACAACGGACCGAGGACAAGTACATCGACGACAACCTCGGCCACGGCCCGATCAAGAACATGGCAACCTTCATTACATAGCATCTCAGAAGGTGGAAGCTAA

Protein sequence

MGNCQAIDAATLVIQHPGGKVDKLYWPVTAREIMKMNPGHYVALLISTAMFTPNESNNNSETTSNSVRLTRIKLLRPADMLVLGQVYRLITSQEVMRGLSAKKQAKVKQNQLEAAEKPERRKEHPPRRSDAAAAGRSVSDQDPVQATKHEKNNGPRTSTSTTTSATARSRTWQPSLHSISEGGS
Homology
[Close]
BLAST of Cp4.1LG18g08300.1 vs. NCBI nr
Match: XP_023516335.1 (uncharacterized protein LOC111780227 [Cucurbita pepo subsp. pepo] >XP_023516336.1 uncharacterized protein LOC111780227 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 349 bits (895), Expect = 7.27e-121
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0 

Query: 1   MGNCQAIDAATLVIQHPGGKVDKLYWPVTAREIMKMNPGHYVALLISTAMFTPNESNNNS 60
           MGNCQAIDAATLVIQHPGGKVDKLYWPVTAREIMKMNPGHYVALLISTAMFTPNESNNNS
Sbjct: 1   MGNCQAIDAATLVIQHPGGKVDKLYWPVTAREIMKMNPGHYVALLISTAMFTPNESNNNS 60

Query: 61  ETTSNSVRLTRIKLLRPADMLVLGQVYRLITSQEVMRGLSAKKQAKVKQNQLEAAEKPER 120
           ETTSNSVRLTRIKLLRPADMLVLGQVYRLITSQEVMRGLSAKKQAKVKQNQLEAAEKPER
Sbjct: 61  ETTSNSVRLTRIKLLRPADMLVLGQVYRLITSQEVMRGLSAKKQAKVKQNQLEAAEKPER 120

Query: 121 RKEHPPRRSDAAAAGRSVSDQDPVQATKHEKNNGPRTSTSTTTSATARSRTWQPSLHSIS 180
           RKEHPPRRSDAAAAGRSVSDQDPVQATKHEKNNGPRTSTSTTTSATARSRTWQPSLHSIS
Sbjct: 121 RKEHPPRRSDAAAAGRSVSDQDPVQATKHEKNNGPRTSTSTTTSATARSRTWQPSLHSIS 180

Query: 181 EGGS 184
           EGGS
Sbjct: 181 EGGS 184

[Close]
BLAST of Cp4.1LG18g08300.1 vs. NCBI nr
Match: KAG7023148.1 (hypothetical protein SDJN02_14173, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 347 bits (891), Expect = 2.96e-120
Identity = 183/184 (99.46%), Postives = 184/184 (100.00%), Query Frame = 0 

Query: 1   MGNCQAIDAATLVIQHPGGKVDKLYWPVTAREIMKMNPGHYVALLISTAMFTPNESNNNS 60
           MGNCQAIDAATLVIQHPGGKVDKLYWPVTAREIMKMNPGHYVALLISTAMFTPNESNNNS
Sbjct: 1   MGNCQAIDAATLVIQHPGGKVDKLYWPVTAREIMKMNPGHYVALLISTAMFTPNESNNNS 60

Query: 61  ETTSNSVRLTRIKLLRPADMLVLGQVYRLITSQEVMRGLSAKKQAKVKQNQLEAAEKPER 120
           ET+SNSVRLTRIKLLRPADMLVLGQVYRLITSQEVMRGLSAKKQAKVKQNQLEAAEKPER
Sbjct: 61  ETSSNSVRLTRIKLLRPADMLVLGQVYRLITSQEVMRGLSAKKQAKVKQNQLEAAEKPER 120

Query: 121 RKEHPPRRSDAAAAGRSVSDQDPVQATKHEKNNGPRTSTSTTTSATARSRTWQPSLHSIS 180
           RKEHPPRRSDAAAAGRSVSDQDPVQATKHEKNNGPRTSTSTTTSATARSRTWQPSLHSIS
Sbjct: 121 RKEHPPRRSDAAAAGRSVSDQDPVQATKHEKNNGPRTSTSTTTSATARSRTWQPSLHSIS 180

Query: 181 EGGS 184
           EGGS
Sbjct: 181 EGGS 184

[Close]
BLAST of Cp4.1LG18g08300.1 vs. NCBI nr
Match: XP_022921691.1 (uncharacterized protein LOC111429863 [Cucurbita moschata] >XP_022921692.1 uncharacterized protein LOC111429863 [Cucurbita moschata])

HSP 1 Score: 346 bits (887), Expect = 1.21e-119
Identity = 182/184 (98.91%), Postives = 184/184 (100.00%), Query Frame = 0 

Query: 1   MGNCQAIDAATLVIQHPGGKVDKLYWPVTAREIMKMNPGHYVALLISTAMFTPNESNNNS 60
           MGNCQAIDAATLVIQHPGGKVDKLYWPVTAREIMKMNPGHYVALLISTAMFTPNESNNNS
Sbjct: 1   MGNCQAIDAATLVIQHPGGKVDKLYWPVTAREIMKMNPGHYVALLISTAMFTPNESNNNS 60

Query: 61  ETTSNSVRLTRIKLLRPADMLVLGQVYRLITSQEVMRGLSAKKQAKVKQNQLEAAEKPER 120
           ET+SNSVRLTRIKLLRPADMLVLGQVYRLITSQEVMRGLSAKKQAKVKQNQLEAAEKPER
Sbjct: 61  ETSSNSVRLTRIKLLRPADMLVLGQVYRLITSQEVMRGLSAKKQAKVKQNQLEAAEKPER 120

Query: 121 RKEHPPRRSDAAAAGRSVSDQDPVQATKHEKNNGPRTSTSTTTSATARSRTWQPSLHSIS 180
           RKEHPPRRSDAAAAGRSVSDQDPVQATKH+KNNGPRTSTSTTTSATARSRTWQPSLHSIS
Sbjct: 121 RKEHPPRRSDAAAAGRSVSDQDPVQATKHKKNNGPRTSTSTTTSATARSRTWQPSLHSIS 180

Query: 181 EGGS 184
           EGGS
Sbjct: 181 EGGS 184

[Close]
BLAST of Cp4.1LG18g08300.1 vs. NCBI nr
Match: XP_022988413.1 (uncharacterized protein LOC111485662 [Cucurbita maxima])

HSP 1 Score: 341 bits (875), Expect = 8.15e-118
Identity = 181/184 (98.37%), Postives = 182/184 (98.91%), Query Frame = 0 

Query: 1   MGNCQAIDAATLVIQHPGGKVDKLYWPVTAREIMKMNPGHYVALLISTAMFTPNESNNNS 60
           MGNCQAIDAATLVIQHPGGKVDKLYWPVTAREIMKMNPGHYVALLISTAMFTPNESNNNS
Sbjct: 1   MGNCQAIDAATLVIQHPGGKVDKLYWPVTAREIMKMNPGHYVALLISTAMFTPNESNNNS 60

Query: 61  ETTSNSVRLTRIKLLRPADMLVLGQVYRLITSQEVMRGLSAKKQAKVKQNQLEAAEKPER 120
           ET+SNSVRLTRIKLLRPADMLVLGQVYRLITSQEVMRGLSAKKQAKVKQNQLEAAEKPER
Sbjct: 61  ETSSNSVRLTRIKLLRPADMLVLGQVYRLITSQEVMRGLSAKKQAKVKQNQLEAAEKPER 120

Query: 121 RKEHPPRRSDAAAAGRSVSDQDPVQATKHEKNNGPRTSTSTTTSATARSRTWQPSLHSIS 180
           RKE PPRRSDAAAAGRSVSDQDPVQATKHEKNN PRTSTSTTTSATARSRTWQPSLHSIS
Sbjct: 121 RKEQPPRRSDAAAAGRSVSDQDPVQATKHEKNNRPRTSTSTTTSATARSRTWQPSLHSIS 180

Query: 181 EGGS 184
           EGGS
Sbjct: 181 EGGS 184

[Close]
BLAST of Cp4.1LG18g08300.1 vs. NCBI nr
Match: KAG6589464.1 (hypothetical protein SDJN03_14887, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 343 bits (879), Expect = 1.16e-117
Identity = 181/183 (98.91%), Postives = 182/183 (99.45%), Query Frame = 0 

Query: 1   MGNCQAIDAATLVIQHPGGKVDKLYWPVTAREIMKMNPGHYVALLISTAMFTPNESNNNS 60
           MGNCQAIDAATLVIQHPGGKVDKLYWPVTAREIMKMNPGHYVALLISTAMFTPNESNNNS
Sbjct: 1   MGNCQAIDAATLVIQHPGGKVDKLYWPVTAREIMKMNPGHYVALLISTAMFTPNESNNNS 60

Query: 61  ETTSNSVRLTRIKLLRPADMLVLGQVYRLITSQEVMRGLSAKKQAKVKQNQLEAAEKPER 120
           ET+SNSVRLTRIKLLRPADMLVLGQVYRLITSQEVMRGLSAKKQAKVKQNQLEAAEKPER
Sbjct: 61  ETSSNSVRLTRIKLLRPADMLVLGQVYRLITSQEVMRGLSAKKQAKVKQNQLEAAEKPER 120

Query: 121 RKEHPPRRSDAAAAGRSVSDQDPVQATKHEKNNGPRTSTSTTTSATARSRTWQPSLHSIS 180
           RKEHPPRRSDAAAAGRSVSDQDPVQATKHEKNNGPRTSTSTTTSATARSRTWQPSLHSIS
Sbjct: 121 RKEHPPRRSDAAAAGRSVSDQDPVQATKHEKNNGPRTSTSTTTSATARSRTWQPSLHSIS 180

Query: 181 EGG 183
           E G
Sbjct: 181 EVG 183

[Close]
BLAST of Cp4.1LG18g08300.1 vs. ExPASy TrEMBL
Match: A0A6J1E173 (uncharacterized protein LOC111429863 OS=Cucurbita moschata OX=3662 GN=LOC111429863 PE=4 SV=1)

HSP 1 Score: 346 bits (887), Expect = 5.84e-120
Identity = 182/184 (98.91%), Postives = 184/184 (100.00%), Query Frame = 0 

Query: 1   MGNCQAIDAATLVIQHPGGKVDKLYWPVTAREIMKMNPGHYVALLISTAMFTPNESNNNS 60
           MGNCQAIDAATLVIQHPGGKVDKLYWPVTAREIMKMNPGHYVALLISTAMFTPNESNNNS
Sbjct: 1   MGNCQAIDAATLVIQHPGGKVDKLYWPVTAREIMKMNPGHYVALLISTAMFTPNESNNNS 60

Query: 61  ETTSNSVRLTRIKLLRPADMLVLGQVYRLITSQEVMRGLSAKKQAKVKQNQLEAAEKPER 120
           ET+SNSVRLTRIKLLRPADMLVLGQVYRLITSQEVMRGLSAKKQAKVKQNQLEAAEKPER
Sbjct: 61  ETSSNSVRLTRIKLLRPADMLVLGQVYRLITSQEVMRGLSAKKQAKVKQNQLEAAEKPER 120

Query: 121 RKEHPPRRSDAAAAGRSVSDQDPVQATKHEKNNGPRTSTSTTTSATARSRTWQPSLHSIS 180
           RKEHPPRRSDAAAAGRSVSDQDPVQATKH+KNNGPRTSTSTTTSATARSRTWQPSLHSIS
Sbjct: 121 RKEHPPRRSDAAAAGRSVSDQDPVQATKHKKNNGPRTSTSTTTSATARSRTWQPSLHSIS 180

Query: 181 EGGS 184
           EGGS
Sbjct: 181 EGGS 184

[Close]
BLAST of Cp4.1LG18g08300.1 vs. ExPASy TrEMBL
Match: A0A6J1JM82 (uncharacterized protein LOC111485662 OS=Cucurbita maxima OX=3661 GN=LOC111485662 PE=4 SV=1)

HSP 1 Score: 341 bits (875), Expect = 3.94e-118
Identity = 181/184 (98.37%), Postives = 182/184 (98.91%), Query Frame = 0 

Query: 1   MGNCQAIDAATLVIQHPGGKVDKLYWPVTAREIMKMNPGHYVALLISTAMFTPNESNNNS 60
           MGNCQAIDAATLVIQHPGGKVDKLYWPVTAREIMKMNPGHYVALLISTAMFTPNESNNNS
Sbjct: 1   MGNCQAIDAATLVIQHPGGKVDKLYWPVTAREIMKMNPGHYVALLISTAMFTPNESNNNS 60

Query: 61  ETTSNSVRLTRIKLLRPADMLVLGQVYRLITSQEVMRGLSAKKQAKVKQNQLEAAEKPER 120
           ET+SNSVRLTRIKLLRPADMLVLGQVYRLITSQEVMRGLSAKKQAKVKQNQLEAAEKPER
Sbjct: 61  ETSSNSVRLTRIKLLRPADMLVLGQVYRLITSQEVMRGLSAKKQAKVKQNQLEAAEKPER 120

Query: 121 RKEHPPRRSDAAAAGRSVSDQDPVQATKHEKNNGPRTSTSTTTSATARSRTWQPSLHSIS 180
           RKE PPRRSDAAAAGRSVSDQDPVQATKHEKNN PRTSTSTTTSATARSRTWQPSLHSIS
Sbjct: 121 RKEQPPRRSDAAAAGRSVSDQDPVQATKHEKNNRPRTSTSTTTSATARSRTWQPSLHSIS 180

Query: 181 EGGS 184
           EGGS
Sbjct: 181 EGGS 184

[Close]
BLAST of Cp4.1LG18g08300.1 vs. ExPASy TrEMBL
Match: A0A0A0LRI4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G005650 PE=4 SV=1)

HSP 1 Score: 285 bits (730), Expect = 5.67e-96
Identity = 161/190 (84.74%), Postives = 171/190 (90.00%), Query Frame = 0 

Query: 1   MGNCQAIDAATLVIQHPGGKVDKLYWPVTAREIMKMNPGHYVALLISTAMFTPNESNNNS 60
           MGNCQAIDAATLVIQHP GK DKLYWPVTAREIMKMNPGHYVALLIST MFTPNESNNN+
Sbjct: 1   MGNCQAIDAATLVIQHPSGKEDKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNN 60

Query: 61  ----ETTSNSVRLTRIKLLRPADMLVLGQVYRLITSQEVMRGLSAKKQAKVKQNQLEAAE 120
               ET+SNSVRLTRIKLLRPADMLVLGQVYRLIT+QEVM+GLSAKKQAKVKQ+QLEAA+
Sbjct: 61  QTSNETSSNSVRLTRIKLLRPADMLVLGQVYRLITTQEVMKGLSAKKQAKVKQSQLEAAD 120

Query: 121 KPERRKEHPPRRSDAAAA--GRSVSDQDPVQATKHEKNNGPRTSTSTTTSATARSRTWQP 180
           KP+RRK+   R SDAAAA  GRSVS +D +QA KHEKNN PRTSTSTT SATARSRTWQP
Sbjct: 121 KPDRRKQRTTRSSDAAAAAAGRSVS-EDQIQANKHEKNNRPRTSTSTT-SATARSRTWQP 180

Query: 181 SLHSISEGGS 184
           SLHSISE GS
Sbjct: 181 SLHSISEAGS 188

[Close]
BLAST of Cp4.1LG18g08300.1 vs. ExPASy TrEMBL
Match: A0A5D3CU41 (DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25242G00010 PE=4 SV=1)

HSP 1 Score: 283 bits (725), Expect = 2.95e-95
Identity = 160/188 (85.11%), Postives = 170/188 (90.43%), Query Frame = 0 

Query: 1   MGNCQAIDAATLVIQHPGGKVDKLYWPVTAREIMKMNPGHYVALLISTAMFTPNESNNNS 60
           MGNCQAIDAATLVIQHP GK DKLYWPVTAREIMKMNPGHYVALLIST MFTPNESNN++
Sbjct: 1   MGNCQAIDAATLVIQHPSGKEDKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNSN 60

Query: 61  ----ETTSNSVRLTRIKLLRPADMLVLGQVYRLITSQEVMRGLSAKKQAKVKQNQLEAAE 120
               ET+SNSVRLTRIKLLRPADMLVLGQVYRLIT+QEVM+GLSAKKQAKVKQ+QLEAA+
Sbjct: 61  QTSNETSSNSVRLTRIKLLRPADMLVLGQVYRLITTQEVMKGLSAKKQAKVKQSQLEAAD 120

Query: 121 KPERRKEHPPRRSDAAAAGRSVSDQDPVQATKHEKNNGPRTSTSTTTSATARSRTWQPSL 180
           KP+RRKE   R SDAAA GRSVS +D +QA KHEKNN PRTSTSTT SATARSRTWQPSL
Sbjct: 121 KPDRRKERTTRSSDAAA-GRSVS-EDQIQANKHEKNNRPRTSTSTT-SATARSRTWQPSL 180

Query: 181 HSISEGGS 184
           HSISE GS
Sbjct: 181 HSISEAGS 185

[Close]
BLAST of Cp4.1LG18g08300.1 vs. ExPASy TrEMBL
Match: A0A1S3BVG8 (uncharacterized protein LOC103493930 OS=Cucumis melo OX=3656 GN=LOC103493930 PE=4 SV=1)

HSP 1 Score: 283 bits (725), Expect = 2.95e-95
Identity = 160/188 (85.11%), Postives = 170/188 (90.43%), Query Frame = 0 

Query: 1   MGNCQAIDAATLVIQHPGGKVDKLYWPVTAREIMKMNPGHYVALLISTAMFTPNESNNNS 60
           MGNCQAIDAATLVIQHP GK DKLYWPVTAREIMKMNPGHYVALLIST MFTPNESNN++
Sbjct: 1   MGNCQAIDAATLVIQHPSGKEDKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNSN 60

Query: 61  ----ETTSNSVRLTRIKLLRPADMLVLGQVYRLITSQEVMRGLSAKKQAKVKQNQLEAAE 120
               ET+SNSVRLTRIKLLRPADMLVLGQVYRLIT+QEVM+GLSAKKQAKVKQ+QLEAA+
Sbjct: 61  QTSNETSSNSVRLTRIKLLRPADMLVLGQVYRLITTQEVMKGLSAKKQAKVKQSQLEAAD 120

Query: 121 KPERRKEHPPRRSDAAAAGRSVSDQDPVQATKHEKNNGPRTSTSTTTSATARSRTWQPSL 180
           KP+RRKE   R SDAAA GRSVS +D +QA KHEKNN PRTSTSTT SATARSRTWQPSL
Sbjct: 121 KPDRRKERTTRSSDAAA-GRSVS-EDQIQANKHEKNNRPRTSTSTT-SATARSRTWQPSL 180

Query: 181 HSISEGGS 184
           HSISE GS
Sbjct: 181 HSISEAGS 185

[Close]
BLAST of Cp4.1LG18g08300.1 vs. TAIR 10
Match: AT1G60010.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10530.1); Has 185 Blast hits to 185 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 180; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 137.9 bits (346), Expect = 8.3e-33
Identity = 90/190 (47.37%), Postives = 121/190 (63.68%), Query Frame = 0 

Query: 1   MGNCQAIDAATLVIQHPGGKVDKLYWPVTAREIMKMNPGHYVALLISTAMFTPNESNNNS 60
           MGNCQA+DAA LV+QHP GK+D+ Y PV+  EIM+M PGHYV+L+I      P ++   +
Sbjct: 1   MGNCQAVDAAALVLQHPDGKIDRYYGPVSVSEIMRMYPGHYVSLIIP----LPEKNIPAT 60

Query: 61  ETTSNS------VRLTRIKLLRPADMLVLGQVYRLITSQEVMRGLSAKKQAKVKQNQLEA 120
            TT++       VR TR+KLLRP + LVLG  YRLITSQEVM+ L AKK AK K++Q E 
Sbjct: 61  TTTTDDKSERKVVRFTRVKLLRPTENLVLGHAYRLITSQEVMKVLRAKKYAKTKKHQSET 120

Query: 121 AEKPERRKEHPPRRSDAAAAGRSVSDQDPVQATKHEKNNGPRTSTSTTTSATARSRTWQP 180
           ++  E++K    ++ D        SD++    TK EK       +  T SA++RS+TW+P
Sbjct: 121 SK--EKKKPSSEKKID------EESDKNQNLETKDEKQR-----SVLTNSASSRSKTWRP 173

Query: 181 SLHSISEGGS 185
           SL SISE  S
Sbjct: 181 SLQSISEATS 173

[Close]
BLAST of Cp4.1LG18g08300.1 vs. TAIR 10
Match: AT5G50090.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 136.7 bits (343), Expect = 1.8e-32
Identity = 88/184 (47.83%), Postives = 111/184 (60.33%), Query Frame = 0 

Query: 1   MGNCQAIDAATLVIQHPGGKVDKLYWPVTAREIMKMNPGHYVALLISTAMFTPNESNNNS 60
           MGNCQA+D A +VIQHP GK +KL  PV+A  +MKMNPGH V+LLIST   +   S +  
Sbjct: 1   MGNCQAVDTARVVIQHPNGKEEKLSCPVSASYVMKMNPGHCVSLLISTTALSSASSGH-- 60

Query: 61  ETTSNSVRLTRIKLLRPADMLVLGQVYRLITSQEVMRGLSAKKQAKVKQNQLEAAEKPER 120
                 +RLTRIKLLRP D LVLG VYRLIT++EVM+GL AKK +K+K+    + +K E 
Sbjct: 61  ---GGPLRLTRIKLLRPTDTLVLGHVYRLITTKEVMKGLMAKKCSKLKKESKGSDDKLEM 120

Query: 121 RKEHPPRRSDAAAAGRSVSDQDPVQATKHEKNNGPRTSTSTTTSATARSRTWQPSLHSIS 180
            K         A     + ++D +Q  K EK              +  SR+WQPSL SIS
Sbjct: 121 VK---------AINSTKLDNEDQLQMKKQEKER------------SRISRSWQPSLQSIS 158

Query: 181 EGGS 185
           EGGS
Sbjct: 181 EGGS 158

[Close]
BLAST of Cp4.1LG18g08300.1 vs. TAIR 10
Match: AT5G50090.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 127.9 bits (320), Expect = 8.6e-30
Identity = 84/184 (45.65%), Postives = 108/184 (58.70%), Query Frame = 0 

Query: 1   MGNCQAIDAATLVIQHPGGKVDKLYWPVTAREIMKMNPGHYVALLISTAMFTPNESNNNS 60
           MGNCQA+D A +VIQHP GK +KL  PV+A  +MKMNPGH V+LLIST   +   S +  
Sbjct: 1   MGNCQAVDTARVVIQHPNGKEEKLSCPVSASYVMKMNPGHCVSLLISTTALSSASSGH-- 60

Query: 61  ETTSNSVRLTRIKLLRPADMLVLGQVYRLITSQEVMRGLSAKKQAKVKQNQLEAAEKPER 120
                 +RLTRIKLLRP D LVLG VYRLIT++EVM+GL AKK +K+K+    + +K E 
Sbjct: 61  ---GGPLRLTRIKLLRPTDTLVLGHVYRLITTKEVMKGLMAKKCSKLKKESKGSDDKLEM 120

Query: 121 RKEHPPRRSDAAAAGRSVSDQDPVQATKHEKNNGPRTSTSTTTSATARSRTWQPSLHSIS 180
            K                     + +TK +  +  +  +         SR+WQPSL SIS
Sbjct: 121 VK--------------------AINSTKLDNEDQEKERSRI-------SRSWQPSLQSIS 152

Query: 181 EGGS 185
           EGGS
Sbjct: 181 EGGS 152

[Close]
BLAST of Cp4.1LG18g08300.1 vs. TAIR 10
Match: AT5G62900.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G50090.1); Has 157 Blast hits to 157 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 157; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 119.4 bits (298), Expect = 3.0e-27
Identity = 83/184 (45.11%), Postives = 106/184 (57.61%), Query Frame = 0 

Query: 1   MGNCQAIDAATLVIQHPGGKVDKLYWPVTAREIMKMNPGHYVALLISTAMFTPNESNNNS 60
           MGNCQA +AAT VIQ P GK  + Y  V A E++K +PGH+VALL+S+A+          
Sbjct: 1   MGNCQAAEAATTVIQQPDGKSVRFYCTVNASEVIKSHPGHHVALLLSSAV---------- 60

Query: 61  ETTSNSVRLTRIKLLRPADMLVLGQVYRLITSQEVMRGLSAKKQAKVKQNQLEAAEKPER 120
                S+R+TRIKLLRP+D L+LG VYRLI+S+EVM+G+ AKK  K+K+   E +   E 
Sbjct: 61  -PHGGSLRVTRIKLLRPSDNLLLGHVYRLISSEEVMKGIRAKKSGKMKKIHGEFSVAEE- 120

Query: 121 RKEHPPRRSDAAAAGRSVSDQDPVQATKHEKNNGPRTSTSTTTSATARSRTWQPSLHSIS 180
                   +       S SD+D  Q   HEK  G       T  AT + R WQPSL SIS
Sbjct: 121 ------EINPLTLRSESASDKD-TQRRIHEKQRG----MMNTGGATNKVRAWQPSLQSIS 161

Query: 181 EGGS 185
           E  S
Sbjct: 181 ESTS 161

[Close]
BLAST of Cp4.1LG18g08300.1 vs. TAIR 10
Match: AT1G10530.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G60010.1); Has 143 Blast hits to 143 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 117.5 bits (293), Expect = 1.2e-26
Identity = 75/188 (39.89%), Postives = 104/188 (55.32%), Query Frame = 0 

Query: 1   MGNCQAIDAATLVIQHPGGKVDKLYWPVTAREIMKMNPGHYVALLISTA----MFTPNES 60
           MGNCQA++AA LV+QHPGG +D+ Y  V+  E+M M PGHYV+L+I  +       P   
Sbjct: 1   MGNCQAVNAAVLVLQHPGGIIDRYYSSVSVTEVMAMYPGHYVSLIIPLSEEEEKNIPATE 60

Query: 61  NNNSETTSNSVRLTRIKLLRPADMLVLGQVYRLITSQEVMRGLSAKKQAKVKQNQLEAAE 120
             + +    +VR TR++LLRP + LVLG  YRLITSQEVM+ L  KK AK K++Q+E   
Sbjct: 61  KGDDKKQRKAVRFTRVQLLRPTENLVLGHAYRLITSQEVMKVLREKKSAKTKKHQIE--- 120

Query: 121 KPERRKEHPPRRSDAAAAGRSVSDQDPVQATKHEKNNGPRTSTSTTTSATARSRTWQPSL 180
                              +  SD+        EK  G +      +++  +S+TW+PSL
Sbjct: 121 --------------KTTTAKKFSDK-----KVPEKKQGKQFRVIRNSTSLLKSKTWRPSL 166

Query: 181 HSISEGGS 185
            SISE  S
Sbjct: 181 QSISEATS 166

The following BLAST results are available for this feature:
BLAST of Cp4.1LG18g08300.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG18g08300.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023516335.17.27e-121100.00uncharacterized protein LOC111780227 [Cucurbita pepo subsp. pepo] >XP_023516336.... [more]
KAG7023148.12.96e-12099.46hypothetical protein SDJN02_14173, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022921691.11.21e-11998.91uncharacterized protein LOC111429863 [Cucurbita moschata] >XP_022921692.1 unchar... [more]
XP_022988413.18.15e-11898.37uncharacterized protein LOC111485662 [Cucurbita maxima][more]
KAG6589464.11.16e-11798.91hypothetical protein SDJN03_14887, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Cp4.1LG18g08300.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1E1735.84e-12098.91uncharacterized protein LOC111429863 OS=Cucurbita moschata OX=3662 GN=LOC1114298... [more]
A0A6J1JM823.94e-11898.37uncharacterized protein LOC111485662 OS=Cucurbita maxima OX=3661 GN=LOC111485662... [more]
A0A0A0LRI45.67e-9684.74Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G005650 PE=4 SV=1[more]
A0A5D3CU412.95e-9585.11DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A1S3BVG82.95e-9585.11uncharacterized protein LOC103493930 OS=Cucumis melo OX=3656 GN=LOC103493930 PE=... [more]
BLAST of Cp4.1LG18g08300.1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G60010.18.3e-3347.37unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin... [more]
AT5G50090.11.8e-3247.83unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin... [more]
AT5G50090.28.6e-3045.65unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G62900.13.0e-2745.11unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin... [more]
AT1G10530.11.2e-2639.89unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025322Protein of unknown function DUF4228, plantPFAMPF14009DUF4228coord: 1..181
e-value: 1.8E-32
score: 113.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..130
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 100..184
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..184
NoneNo IPR availablePANTHERPTHR33413:SF28DUF4228 DOMAIN PROTEINcoord: 1..184
NoneNo IPR availablePANTHERPTHR33413EXPRESSED PROTEINcoord: 1..184

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cp4.1LG18g08300Cp4.1LG18g08300gene


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cp4.1LG18g08300.1:three_prime_utr:001Cp4.1LG18g08300.1:three_prime_utr:001three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cp4.1LG18g08300.1:exon:004Cp4.1LG18g08300.1:exon:004exon
Cp4.1LG18g08300.1:exon:003Cp4.1LG18g08300.1:exon:003exon
Cp4.1LG18g08300.1:exon:002Cp4.1LG18g08300.1:exon:002exon
Cp4.1LG18g08300.1:exon:001Cp4.1LG18g08300.1:exon:001exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cp4.1LG18g08300.1:cds:001Cp4.1LG18g08300.1:cds:001CDS
Cp4.1LG18g08300.1:cds:002Cp4.1LG18g08300.1:cds:002CDS
Cp4.1LG18g08300.1:cds:003Cp4.1LG18g08300.1:cds:003CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cp4.1LG18g08300.1:five_prime_utr:001Cp4.1LG18g08300.1:five_prime_utr:001five_prime_UTR
Cp4.1LG18g08300.1:five_prime_utr:002Cp4.1LG18g08300.1:five_prime_utr:002five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cp4.1LG18g08300.1Cp4.1LG18g08300.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane