Cp4.1LG18g06390.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG18g06390.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Transmembrane protein
Location	Cp4.1LG18: 6562187 .. 6566080 (-)
Sequence length	1337
RNA-Seq Expression	Cp4.1LG18g06390.1
Synteny	Cp4.1LG18g06390.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGTTTCGAGGCATAAATTTTTGTTAGTTGAAGAGAAGGGAGTGCTGACGAAGAATTTGGAATTTGATTTGATATACTTCCAATGGCGGAAGGACCGGAAGCGATCCCTGCAAGCTCTCAATCCTCGTCTGCTCCGGAATGGCGGGATGACAATCTTGAACACACTCAGGTGCAATTTTCTTTTTCTCTCTTTTTTTTTTCCTCCAAGTTTTAGGTTCTATTTAGTTGATTTTATTCGAAGTTTCGAACTCGTTTTAGTTCGACCGCGGATTCAATTTCAGGCGACTTTCTCTTTTCTGGCTGTGTTTGATGGAGGTTTCTTCTTGATGTTCTTCCTTAGTGTTATTTATTGACACCTCTGTTGGATTTGCTTTTGAATTGAATATGAGAAACGTGTGAATTTTCTATATAGAGAATCTGCTGGAACAATTTGCACAATTGTTTTGGATAAAAATGCTGCTAAATACCGATCGATATTTTCTACAGAGGATCTACTCGATCAACTTACTCGGTTATTTTTTATCAATTGCTGTAAATATTGGCCACAACATGAAGCTCAACGTCTATTAGTAGGGACTTTTGTGTTCGGTATTTTGCATTCATCTGTCCGAGCCAGAATTTTATTTTGGTATCAATGATGTTGATGGGGCCCATCGAACTTAAGAGGCACAAACTTTATATCGCTTAGCCTCACTATTGCTCATGACTTGTAGTGTGGTCGGCCTAAAGGACTCATTCCGAAAGAGAGATCTTTCTTTGGAGTTATGAAATCATTTAGGTTGAAAAGCAAGTCGATGATGTCATAAGTCAAGTGGGCGGGTGAGGCGAGAATTCCTTCATTGCACTCACGGGAGAGAAGGGATCATCTGATGGATTCTGTGGTTACTTTGTGTGAGATCCCACACCGGCTGAGGAGGAGAACGAAACATTCTTTATAAGGATGCGGAAACTCTCCCTAGAAGACGCGTTTTAAAACTATGAGGCTGACGGCGATACGTGACGGGCCAAAGCGAAAAATATCTACAAGCGGTGGGTTTGAGTTGTTACAGATAGTATCAGAGCCAGACACCGGGTGATGTGCCAGTAAGGAGGCTAAGCCCCAAAGGGAGGTGCACACTGGTGTGCCAGTAAAGACGTTGGGCCCCGAAGGGGAGTGGATTGTGAGATTTCACATTGGTTGGGGAGGAGAACGAAAAGGTGTGGAAACCTCTCCCCAGCAGACGCATTTCAAAATTGTGAGGCTGACGGTGATACATAACGGGCCACAACGGATAATATCTGCGAGCAGTAGGTTTGAGTTATTACACTTTGGTTAAAGGCTTATATCATTTTGGAGTCGTATTTGTAAACTATAGTGCAACTAACAGAATGAGTTTGACAACTAAGTTTAATACATGTGGTGCCATTGAAACTTTCTTACATTGGCTTGGTGCTATTTAAAGTTTAATCATATCTAATCGAAAAGTTCTTTCTTAATTTGTTTCTAGCAATCTGAATTAGAAGAAAGTGCGCATGAAAATGTTTATTTTTATTTTTTATTAATGCTTTTTACAAGTAGAGACATCATTCTTTCTGAATTCTTTAACTTGATTTCAGGTTCCTAAAATTTCCAGTTTCCTCACTCCGAACGGCGATTTTAAAATGATTCCAATCATGTATCCTATACTTGTTCCTGGATCAGCTCCTTCGGAAAATCAAAATCGTGGAGCTGGCATTTATGCGGTTCCTGCTTTACCATCAATCGGCGGGCCCATTGTTGGAATGGCATCTAACAATCTTATTCCTTTAACTTACAGCATACCCACGTCAGTATCTCTATCATTATTCTAGAAAATGAATTAAAATAAGTAATTTGAATGGCATGTTGATGTTCCAATAGCAATTTGATTGAGCCAAACATGAAGTTATTGATTTCATTTTGATTCAATGAATTAGTTACAAGCTACCTATTATGATATCACAATCTCCCAAGGACGAGTGAGATGAGGGAGGGAGACCTAACATCTCTTGAGTTTGGAGGGTAATTGACAGGGCTGAGATGTACTCCCTTGATTGAATTTTAGTTGTGAGGCCTAGAATATTGGGTGAATGGTTGCATCTTGATGATGTTGTTATCTTTGAGAATCTTTGTAAATGTGCTCCACAACTAGAAAGGGTCATAATATCTAGGAGGGAGCCTTCTTGTTGCACTGGTCCTTCTTGTGTGCACAATTGAAACGAATGGGGACTGTAGCATTGTTGATATCATGCTCTTAGGTACAAGAACTAATGGGCTTACAAAAAAAAAAAAAAAAAAAGCGGAGAAAAATTGTATTTTCATAACTTAAGCTGTCCAAACAGGCCCTATGAGTAATTTCTTTGTTGGCTTGCAATGATCTGGTAATATGTGACCTTGAATCTCAACAATTTTTAATGAAGGTCTTTTTCATATTTCACATGATTTGAGGAACAACACATCCAATATGCATGACGAGTTGAGATTTGTTGACTTCTTTGGTTTGTAATTTTCAAGCAGCTAGTTTTCAGTGTGATAATATATGTACTTAGAACCAGAGATTCTGTTCGAGTGTATTGACATCTATCTTTTATTTATAACTGTAGTAGATCTGATACCATTAATAGAACAAGTCCTGAGGGTGGCGCTGCAGTCGAGGAGAACGGGCGAGTAGGACAACAACAGCAACAACCAGAACCTCAAAGACAAGTTGTCGTCAGAAGATTTCAAATTGCTATACAGATTGATTTGTTGCTTATACTGAAGCTTGCTGCTCTAATTTTTCTTGTTCATCAAGATGGTTCAAGACAAAGGCTTGTTGTTCTGGTGATTTGTGCTTCACTAGTCTATCTGTAAGCAATATCCTTGAACTTTTGCTAGTTCCTTGTATGCATGAATCTAGTTATAGTTGCAGTAGCCATTACTAGCCGTCCATAAGTATTCTATCAAATTTCTGATAAACAATGACCTACTACTCAATGGAAGATGCCCTTTTCCCAATTGACACTTATTGTCTTTGTATGAGTGAAGTTATGTATTAGGCTGATCCTCTCTTGGAATTGTCACAGATATCAAACTGGAGCGCTTACACCATTGATACGATGGCTATCACAAGGCATGCAAAGGGCAGCTGCACCGCCCCAACCACCGAGACCAGAAGTTCGGGCAGAGCATGCTCCGGTAGCTCCTCCAGCTGCAAGGCAAGAAGCTCAGAATGCTGCTTTTGCAGGTAAATTTTTGCTTAAATAGCATATTTAGGTTTGATAAACAATGGTTTTATGAACCGCAATTGGCTCGTTTAGATATCAGTGAAGTTTCTCAGTTTCATTCAAATAAAATGGCAGTGGGACAACCGGTGGCGGAGGAGGTTGAGAACCAACCAGCAAATGAAGGGAACCGAGGCGTTGAAAATGAGAATGTGGCAGAAGGTGGCCCTGGAAATGGCGGTCTGAACTGGTGGGGAGTGGTGAAGGAAATCCAGATGATAGTCTTTGGGTTCATCACTTCCCTGCTTCCAGGCTTCCATAACCACATGGATTAGAGCATTACTGAAAGCTCGTGAACCAATATGAACAGGAAACAGTTCTTTCTTTGTTGCTTTTTTGACTTCAAAGGCTATTATTAAATATTTGATGTTAGCAACTTAGCAGCCACGTCTTTGGCCCATGCATACCCAATGCGTACCATTCACATCAACCGGCCCACAATCTGTCAATTTCCCATATGAATGATAAATAAACTGATAATAACTCATCGATCTAAGATACTTAAATCTTTTTTAGGTTGGAGGTTTGCTTTAAATTAGCGTTCTTCGTGTTGTGCTGTTGTTAAAGGAAGAAACTTCTTTGTGTGGGTCATTGCTATGATCATTTTCAATTTAAAGTTTTGGTTCGAGTTCC

mRNA sequence

TAGTTTCGAGGCATAAATTTTTGTTAGTTGAAGAGAAGGGAGTGCTGACGAAGAATTTGGAATTTGATTTGATATACTTCCAATGGCGGAAGGACCGGAAGCGATCCCTGCAAGCTCTCAATCCTCGTCTGCTCCGGAATGGCGGGATGACAATCTTGAACACACTCAGGTTCCTAAAATTTCCAGTTTCCTCACTCCGAACGGCGATTTTAAAATGATTCCAATCATGTATCCTATACTTGTTCCTGGATCAGCTCCTTCGGAAAATCAAAATCGTGGAGCTGGCATTTATGCGGTTCCTGCTTTACCATCAATCGGCGGGCCCATTGTTGGAATGGCATCTAACAATCTTATTCCTTTAACTTACAGCATACCCACATCTGATACCATTAATAGAACAAGTCCTGAGGGTGGCGCTGCAGTCGAGGAGAACGGGCGAGTAGGACAACAACAGCAACAACCAGAACCTCAAAGACAAGTTGTCGTCAGAAGATTTCAAATTGCTATACAGATTGATTTGTTGCTTATACTGAAGCTTGCTGCTCTAATTTTTCTTGTTCATCAAGATGGTTCAAGACAAAGGCTTGTTGTTCTGGTGATTTGTGCTTCACTAGTCTATCTATATCAAACTGGAGCGCTTACACCATTGATACGATGGCTATCACAAGGCATGCAAAGGGCAGCTGCACCGCCCCAACCACCGAGACCAGAAGTTCGGGCAGAGCATGCTCCGGTAGCTCCTCCAGCTGCAAGGCAAGAAGCTCAGAATGCTGCTTTTGCAGTGGGACAACCGGTGGCGGAGGAGGTTGAGAACCAACCAGCAAATGAAGGGAACCGAGGCGTTGAAAATGAGAATGTGGCAGAAGGTGGCCCTGGAAATGGCGGTCTGAACTGGTGGGGAGTGGTGAAGGAAATCCAGATGATAGTCTTTGGGTTCATCACTTCCCTGCTTCCAGGCTTCCATAACCACATGGATTAGAGCATTACTGAAAGCTCGTGAACCAATATGAACAGGAAACAGTTCTTTCTTTGTTGCTTTTTTGACTTCAAAGGCTATTATTAAATATTTGATGTTAGCAACTTAGCAGCCACGTCTTTGGCCCATGCATACCCAATGCGTACCATTCACATCAACCGGCCCACAATCTGTCAATTTCCCATATGAATGATAAATAAACTGATAATAACTCATCGATCTAAGATACTTAAATCTTTTTTAGGTTGGAGGTTTGCTTTAAATTAGCGTTCTTCGTGTTGTGCTGTTGTTAAAGGAAGAAACTTCTTTGTGTGGGTCATTGCTATGATCATTTTCAATTTAAAGTTTTGGTTCGAGTTCC

Coding sequence (CDS)

ATGGCGGAAGGACCGGAAGCGATCCCTGCAAGCTCTCAATCCTCGTCTGCTCCGGAATGGCGGGATGACAATCTTGAACACACTCAGGTTCCTAAAATTTCCAGTTTCCTCACTCCGAACGGCGATTTTAAAATGATTCCAATCATGTATCCTATACTTGTTCCTGGATCAGCTCCTTCGGAAAATCAAAATCGTGGAGCTGGCATTTATGCGGTTCCTGCTTTACCATCAATCGGCGGGCCCATTGTTGGAATGGCATCTAACAATCTTATTCCTTTAACTTACAGCATACCCACATCTGATACCATTAATAGAACAAGTCCTGAGGGTGGCGCTGCAGTCGAGGAGAACGGGCGAGTAGGACAACAACAGCAACAACCAGAACCTCAAAGACAAGTTGTCGTCAGAAGATTTCAAATTGCTATACAGATTGATTTGTTGCTTATACTGAAGCTTGCTGCTCTAATTTTTCTTGTTCATCAAGATGGTTCAAGACAAAGGCTTGTTGTTCTGGTGATTTGTGCTTCACTAGTCTATCTATATCAAACTGGAGCGCTTACACCATTGATACGATGGCTATCACAAGGCATGCAAAGGGCAGCTGCACCGCCCCAACCACCGAGACCAGAAGTTCGGGCAGAGCATGCTCCGGTAGCTCCTCCAGCTGCAAGGCAAGAAGCTCAGAATGCTGCTTTTGCAGTGGGACAACCGGTGGCGGAGGAGGTTGAGAACCAACCAGCAAATGAAGGGAACCGAGGCGTTGAAAATGAGAATGTGGCAGAAGGTGGCCCTGGAAATGGCGGTCTGAACTGGTGGGGAGTGGTGAAGGAAATCCAGATGATAGTCTTTGGGTTCATCACTTCCCTGCTTCCAGGCTTCCATAACCACATGGATTAG

Protein sequence

MAEGPEAIPASSQSSSAPEWRDDNLEHTQVPKISSFLTPNGDFKMIPIMYPILVPGSAPSENQNRGAGIYAVPALPSIGGPIVGMASNNLIPLTYSIPTSDTINRTSPEGGAAVEENGRVGQQQQQPEPQRQVVVRRFQIAIQIDLLLILKLAALIFLVHQDGSRQRLVVLVICASLVYLYQTGALTPLIRWLSQGMQRAAAPPQPPRPEVRAEHAPVAPPAARQEAQNAAFAVGQPVAEEVENQPANEGNRGVENENVAEGGPGNGGLNWWGVVKEIQMIVFGFITSLLPGFHNHMD

Homology

[Close]

BLAST of Cp4.1LG18g06390.1 vs. NCBI nr
Match: XP_023515835.1 (uncharacterized protein LOC111779881 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 570 bits (1470), Expect = 1.05e-204
Identity = 298/299 (99.67%), Postives = 298/299 (99.67%), Query Frame = 0


Query: 1   MAEGPEAIPASSQSSSAPEWRDDNLEHTQVPKISSFLTPNGDFKMIPIMYPILVPGSAPS 60
           MAEGPEAIPASSQSSSAPEWRDDNLEHTQVPKISSFLTPNGDFKMIPIMYPILVPGSAPS
Sbjct: 1   MAEGPEAIPASSQSSSAPEWRDDNLEHTQVPKISSFLTPNGDFKMIPIMYPILVPGSAPS 60

Query: 61  ENQNRGAGIYAVPALPSIGGPIVGMASNNLIPLTYSIPT-SDTINRTSPEGGAAVEENGR 120
           ENQNRGAGIYAVPALPSIGGPIVGMASNNLIPLTYSIPT SDTINRTSPEGGAAVEENGR
Sbjct: 61  ENQNRGAGIYAVPALPSIGGPIVGMASNNLIPLTYSIPTRSDTINRTSPEGGAAVEENGR 120

Query: 121 VGQQQQQPEPQRQVVVRRFQIAIQIDLLLILKLAALIFLVHQDGSRQRLVVLVICASLVY 180
           VGQQQQQPEPQRQVVVRRFQIAIQIDLLLILKLAALIFLVHQDGSRQRLVVLVICASLVY
Sbjct: 121 VGQQQQQPEPQRQVVVRRFQIAIQIDLLLILKLAALIFLVHQDGSRQRLVVLVICASLVY 180

Query: 181 LYQTGALTPLIRWLSQGMQRAAAPPQPPRPEVRAEHAPVAPPAARQEAQNAAFAVGQPVA 240
           LYQTGALTPLIRWLSQGMQRAAAPPQPPRPEVRAEHAPVAPPAARQEAQNAAFAVGQPVA
Sbjct: 181 LYQTGALTPLIRWLSQGMQRAAAPPQPPRPEVRAEHAPVAPPAARQEAQNAAFAVGQPVA 240

Query: 241 EEVENQPANEGNRGVENENVAEGGPGNGGLNWWGVVKEIQMIVFGFITSLLPGFHNHMD 298
           EEVENQPANEGNRGVENENVAEGGPGNGGLNWWGVVKEIQMIVFGFITSLLPGFHNHMD
Sbjct: 241 EEVENQPANEGNRGVENENVAEGGPGNGGLNWWGVVKEIQMIVFGFITSLLPGFHNHMD 299

[Close]

BLAST of Cp4.1LG18g06390.1 vs. NCBI nr
Match: KAG6589693.1 (hypothetical protein SDJN03_15116, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 565 bits (1456), Expect = 1.43e-202
Identity = 295/299 (98.66%), Postives = 296/299 (99.00%), Query Frame = 0


Query: 1   MAEGPEAIPASSQSSSAPEWRDDNLEHTQVPKISSFLTPNGDFKMIPIMYPILVPGSAPS 60
           MAEGPEAIPASSQSSSAPEWRDDNLEHTQVPKISSFLTPNGDFKMIPIMYP+LVPGSAPS
Sbjct: 1   MAEGPEAIPASSQSSSAPEWRDDNLEHTQVPKISSFLTPNGDFKMIPIMYPVLVPGSAPS 60

Query: 61  ENQNRGAGIYAVPALPSIGGPIVGMASNNLIPLTYSIPT-SDTINRTSPEGGAAVEENGR 120
           ENQNRGAGIYAVPALPSIGGPIVGMASNNLIPLTYSIPT SDT NRTSPEGGAAVEENGR
Sbjct: 61  ENQNRGAGIYAVPALPSIGGPIVGMASNNLIPLTYSIPTRSDTSNRTSPEGGAAVEENGR 120

Query: 121 VGQQQQQPEPQRQVVVRRFQIAIQIDLLLILKLAALIFLVHQDGSRQRLVVLVICASLVY 180
           VGQQQQQPEPQRQVVVRRFQIAIQIDLLLILKLAALIFLVHQDGSRQRLVVLVICASLVY
Sbjct: 121 VGQQQQQPEPQRQVVVRRFQIAIQIDLLLILKLAALIFLVHQDGSRQRLVVLVICASLVY 180

Query: 181 LYQTGALTPLIRWLSQGMQRAAAPPQPPRPEVRAEHAPVAPPAARQEAQNAAFAVGQPVA 240
           LYQTGALTPLIRWLSQGMQRAAAPPQPPRPEVRAEHAPVAPPAARQEAQNAAFAVGQP A
Sbjct: 181 LYQTGALTPLIRWLSQGMQRAAAPPQPPRPEVRAEHAPVAPPAARQEAQNAAFAVGQPGA 240

Query: 241 EEVENQPANEGNRGVENENVAEGGPGNGGLNWWGVVKEIQMIVFGFITSLLPGFHNHMD 298
           EEVENQPANEGNRGVENENVAEGGPGNGGLNWWGVVKEIQMIVFGFITSLLPGFHNHMD
Sbjct: 241 EEVENQPANEGNRGVENENVAEGGPGNGGLNWWGVVKEIQMIVFGFITSLLPGFHNHMD 299

[Close]

BLAST of Cp4.1LG18g06390.1 vs. NCBI nr
Match: KAG7023373.1 (hypothetical protein SDJN02_14398 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 563 bits (1451), Expect = 7.99e-202
Identity = 293/298 (98.32%), Postives = 294/298 (98.66%), Query Frame = 0


Query: 1   MAEGPEAIPASSQSSSAPEWRDDNLEHTQVPKISSFLTPNGDFKMIPIMYPILVPGSAPS 60
           MAEGPEAIPASSQSSSAPEWRD NLEHTQVPKISSFLTPNGDFKMIPIMYP+LVPGSA S
Sbjct: 1   MAEGPEAIPASSQSSSAPEWRDGNLEHTQVPKISSFLTPNGDFKMIPIMYPVLVPGSALS 60

Query: 61  ENQNRGAGIYAVPALPSIGGPIVGMASNNLIPLTYSIPTSDTINRTSPEGGAAVEENGRV 120
           ENQNRGAGIYAVPALPSIGGPIVGMASNNLIPLTYSIPTSDT NRTSPEGGAAVEENGRV
Sbjct: 61  ENQNRGAGIYAVPALPSIGGPIVGMASNNLIPLTYSIPTSDTSNRTSPEGGAAVEENGRV 120

Query: 121 GQQQQQPEPQRQVVVRRFQIAIQIDLLLILKLAALIFLVHQDGSRQRLVVLVICASLVYL 180
           GQQQQQPEPQRQVVVRRFQIAIQIDLLLILKLAALIFLVHQDGSRQRLVVLVICASLVYL
Sbjct: 121 GQQQQQPEPQRQVVVRRFQIAIQIDLLLILKLAALIFLVHQDGSRQRLVVLVICASLVYL 180

Query: 181 YQTGALTPLIRWLSQGMQRAAAPPQPPRPEVRAEHAPVAPPAARQEAQNAAFAVGQPVAE 240
           YQTGALTPLIRWLSQGMQRAAAPPQPPRPEVRAEHAPVAPPAARQEAQNAAFAVGQP AE
Sbjct: 181 YQTGALTPLIRWLSQGMQRAAAPPQPPRPEVRAEHAPVAPPAARQEAQNAAFAVGQPGAE 240

Query: 241 EVENQPANEGNRGVENENVAEGGPGNGGLNWWGVVKEIQMIVFGFITSLLPGFHNHMD 298
           EVENQPANEGNRGVENENVAEGGPGNGGLNWWGVVKEIQMIVFGFITSLLPGFHNHMD
Sbjct: 241 EVENQPANEGNRGVENENVAEGGPGNGGLNWWGVVKEIQMIVFGFITSLLPGFHNHMD 298

[Close]

BLAST of Cp4.1LG18g06390.1 vs. NCBI nr
Match: XP_022922023.1 (uncharacterized protein LOC111430099 [Cucurbita moschata])

HSP 1 Score: 559 bits (1441), Expect = 2.77e-200
Identity = 293/299 (97.99%), Postives = 294/299 (98.33%), Query Frame = 0


Query: 1   MAEGPEAIPASSQSSSAPEWRDDNLEHTQVPKISSFLTPNGDFKMIPIMYPILVPGSAPS 60
           MAEGPEAIPASSQSSSAPEWRDDNLEHTQV KISSFLTPNGDFKMIPIMYP+LVPGSAPS
Sbjct: 1   MAEGPEAIPASSQSSSAPEWRDDNLEHTQVRKISSFLTPNGDFKMIPIMYPVLVPGSAPS 60

Query: 61  ENQNRGAGIYAVPALPSIGGPIVGMASNNLIPLTYSIPT-SDTINRTSPEGGAAVEENGR 120
           ENQNRGAGIYAVPALPSIGGPIVGMASNNLIPLTYSIPT SDT NRTSPEGGAAVEENGR
Sbjct: 61  ENQNRGAGIYAVPALPSIGGPIVGMASNNLIPLTYSIPTRSDTSNRTSPEGGAAVEENGR 120

Query: 121 VGQQQQQPEPQRQVVVRRFQIAIQIDLLLILKLAALIFLVHQDGSRQRLVVLVICASLVY 180
           VGQQQQQPEPQRQVVVRRFQIAIQIDLLLILKLAALIFLVHQDGSRQRLVVLVICASLVY
Sbjct: 121 VGQQQQQPEPQRQVVVRRFQIAIQIDLLLILKLAALIFLVHQDGSRQRLVVLVICASLVY 180

Query: 181 LYQTGALTPLIRWLSQGMQRAAAPPQPPRPEVRAEHAPVAPPAARQEAQNAAFAVGQPVA 240
           LYQTGALTPLIRWLSQGMQ AAAPPQPPRPEVRAEHAPVAPPAARQEAQNAAFAVGQP A
Sbjct: 181 LYQTGALTPLIRWLSQGMQMAAAPPQPPRPEVRAEHAPVAPPAARQEAQNAAFAVGQPGA 240

Query: 241 EEVENQPANEGNRGVENENVAEGGPGNGGLNWWGVVKEIQMIVFGFITSLLPGFHNHMD 298
           EEVENQPANEGNRGVENENVAEGGPGNGGLNWWGVVKEIQMIVFGFITSLLPGFHNHMD
Sbjct: 241 EEVENQPANEGNRGVENENVAEGGPGNGGLNWWGVVKEIQMIVFGFITSLLPGFHNHMD 299

[Close]

BLAST of Cp4.1LG18g06390.1 vs. NCBI nr
Match: XP_022987221.1 (uncharacterized protein LOC111484839 [Cucurbita maxima])

HSP 1 Score: 553 bits (1424), Expect = 1.08e-197
Identity = 290/299 (96.99%), Postives = 292/299 (97.66%), Query Frame = 0


Query: 1   MAEGPEAIPASSQSSSAPEWRDDNLEHTQVPKISSFLTPNGDFKMIPIMYPILVPGSAPS 60
           MAEGPEAIPASSQSSSAPEWRD NLEHTQVPKISSFLTPNGDFKMIPIMYP+LVPGS PS
Sbjct: 1   MAEGPEAIPASSQSSSAPEWRDGNLEHTQVPKISSFLTPNGDFKMIPIMYPVLVPGSVPS 60

Query: 61  ENQNRGAGIYAVPALPSIGGPIVGMASNNLIPLTYSIPT-SDTINRTSPEGGAAVEENGR 120
           ENQNRGAGIYAVPALPSIGGPIVGMASNNLIPLTYSIPT SDT NRTSPEGGAAVEEN R
Sbjct: 61  ENQNRGAGIYAVPALPSIGGPIVGMASNNLIPLTYSIPTRSDTSNRTSPEGGAAVEENER 120

Query: 121 VGQQQQQPEPQRQVVVRRFQIAIQIDLLLILKLAALIFLVHQDGSRQRLVVLVICASLVY 180
           VGQQQQQPEPQRQVVVRRFQIAIQIDLLLILKLAALIFLVHQDGSRQRLVVLVICASLVY
Sbjct: 121 VGQQQQQPEPQRQVVVRRFQIAIQIDLLLILKLAALIFLVHQDGSRQRLVVLVICASLVY 180

Query: 181 LYQTGALTPLIRWLSQGMQRAAAPPQPPRPEVRAEHAPVAPPAARQEAQNAAFAVGQPVA 240
           LYQTGALTPLIRWLSQGMQRAAAPPQPPRPEVRAEHA +APPAARQEAQNAAFAVGQP A
Sbjct: 181 LYQTGALTPLIRWLSQGMQRAAAPPQPPRPEVRAEHALLAPPAARQEAQNAAFAVGQPGA 240

Query: 241 EEVENQPANEGNRGVENENVAEGGPGNGGLNWWGVVKEIQMIVFGFITSLLPGFHNHMD 298
           EEVENQPANEGNRGVENENVAEGGPGNGGLNWWGVVKEIQMIVFGFITSLLPGFHNHMD
Sbjct: 241 EEVENQPANEGNRGVENENVAEGGPGNGGLNWWGVVKEIQMIVFGFITSLLPGFHNHMD 299

[Close]

BLAST of Cp4.1LG18g06390.1 vs. ExPASy TrEMBL
Match: A0A6J1E5F0 (uncharacterized protein LOC111430099 OS=Cucurbita moschata OX=3662 GN=LOC111430099 PE=4 SV=1)

HSP 1 Score: 559 bits (1441), Expect = 1.34e-200
Identity = 293/299 (97.99%), Postives = 294/299 (98.33%), Query Frame = 0


Query: 1   MAEGPEAIPASSQSSSAPEWRDDNLEHTQVPKISSFLTPNGDFKMIPIMYPILVPGSAPS 60
           MAEGPEAIPASSQSSSAPEWRDDNLEHTQV KISSFLTPNGDFKMIPIMYP+LVPGSAPS
Sbjct: 1   MAEGPEAIPASSQSSSAPEWRDDNLEHTQVRKISSFLTPNGDFKMIPIMYPVLVPGSAPS 60

Query: 61  ENQNRGAGIYAVPALPSIGGPIVGMASNNLIPLTYSIPT-SDTINRTSPEGGAAVEENGR 120
           ENQNRGAGIYAVPALPSIGGPIVGMASNNLIPLTYSIPT SDT NRTSPEGGAAVEENGR
Sbjct: 61  ENQNRGAGIYAVPALPSIGGPIVGMASNNLIPLTYSIPTRSDTSNRTSPEGGAAVEENGR 120

Query: 121 VGQQQQQPEPQRQVVVRRFQIAIQIDLLLILKLAALIFLVHQDGSRQRLVVLVICASLVY 180
           VGQQQQQPEPQRQVVVRRFQIAIQIDLLLILKLAALIFLVHQDGSRQRLVVLVICASLVY
Sbjct: 121 VGQQQQQPEPQRQVVVRRFQIAIQIDLLLILKLAALIFLVHQDGSRQRLVVLVICASLVY 180

Query: 181 LYQTGALTPLIRWLSQGMQRAAAPPQPPRPEVRAEHAPVAPPAARQEAQNAAFAVGQPVA 240
           LYQTGALTPLIRWLSQGMQ AAAPPQPPRPEVRAEHAPVAPPAARQEAQNAAFAVGQP A
Sbjct: 181 LYQTGALTPLIRWLSQGMQMAAAPPQPPRPEVRAEHAPVAPPAARQEAQNAAFAVGQPGA 240

Query: 241 EEVENQPANEGNRGVENENVAEGGPGNGGLNWWGVVKEIQMIVFGFITSLLPGFHNHMD 298
           EEVENQPANEGNRGVENENVAEGGPGNGGLNWWGVVKEIQMIVFGFITSLLPGFHNHMD
Sbjct: 241 EEVENQPANEGNRGVENENVAEGGPGNGGLNWWGVVKEIQMIVFGFITSLLPGFHNHMD 299

[Close]

BLAST of Cp4.1LG18g06390.1 vs. ExPASy TrEMBL
Match: A0A6J1JDJ6 (uncharacterized protein LOC111484839 OS=Cucurbita maxima OX=3661 GN=LOC111484839 PE=4 SV=1)

HSP 1 Score: 553 bits (1424), Expect = 5.23e-198
Identity = 290/299 (96.99%), Postives = 292/299 (97.66%), Query Frame = 0


Query: 1   MAEGPEAIPASSQSSSAPEWRDDNLEHTQVPKISSFLTPNGDFKMIPIMYPILVPGSAPS 60
           MAEGPEAIPASSQSSSAPEWRD NLEHTQVPKISSFLTPNGDFKMIPIMYP+LVPGS PS
Sbjct: 1   MAEGPEAIPASSQSSSAPEWRDGNLEHTQVPKISSFLTPNGDFKMIPIMYPVLVPGSVPS 60

Query: 61  ENQNRGAGIYAVPALPSIGGPIVGMASNNLIPLTYSIPT-SDTINRTSPEGGAAVEENGR 120
           ENQNRGAGIYAVPALPSIGGPIVGMASNNLIPLTYSIPT SDT NRTSPEGGAAVEEN R
Sbjct: 61  ENQNRGAGIYAVPALPSIGGPIVGMASNNLIPLTYSIPTRSDTSNRTSPEGGAAVEENER 120

Query: 121 VGQQQQQPEPQRQVVVRRFQIAIQIDLLLILKLAALIFLVHQDGSRQRLVVLVICASLVY 180
           VGQQQQQPEPQRQVVVRRFQIAIQIDLLLILKLAALIFLVHQDGSRQRLVVLVICASLVY
Sbjct: 121 VGQQQQQPEPQRQVVVRRFQIAIQIDLLLILKLAALIFLVHQDGSRQRLVVLVICASLVY 180

Query: 181 LYQTGALTPLIRWLSQGMQRAAAPPQPPRPEVRAEHAPVAPPAARQEAQNAAFAVGQPVA 240
           LYQTGALTPLIRWLSQGMQRAAAPPQPPRPEVRAEHA +APPAARQEAQNAAFAVGQP A
Sbjct: 181 LYQTGALTPLIRWLSQGMQRAAAPPQPPRPEVRAEHALLAPPAARQEAQNAAFAVGQPGA 240

Query: 241 EEVENQPANEGNRGVENENVAEGGPGNGGLNWWGVVKEIQMIVFGFITSLLPGFHNHMD 298
           EEVENQPANEGNRGVENENVAEGGPGNGGLNWWGVVKEIQMIVFGFITSLLPGFHNHMD
Sbjct: 241 EEVENQPANEGNRGVENENVAEGGPGNGGLNWWGVVKEIQMIVFGFITSLLPGFHNHMD 299

[Close]

BLAST of Cp4.1LG18g06390.1 vs. ExPASy TrEMBL
Match: A0A1S3BWN3 (uncharacterized protein LOC103494241 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494241 PE=4 SV=1)

HSP 1 Score: 481 bits (1239), Expect = 9.61e-170
Identity = 262/305 (85.90%), Postives = 277/305 (90.82%), Query Frame = 0


Query: 1   MAEGPEAIPASSQSSSAPEWRDDNLEHTQVPKISSFLT-PNGDFKMIPIMYPILVPGSAP 60
           MAEGPE+IP+SSQSSSA +W+DDNLE TQVPKISSF T PNG+ +MIPIMYP LVPGSA 
Sbjct: 1   MAEGPESIPSSSQSSSALKWQDDNLEQTQVPKISSFPTFPNGNVQMIPIMYPALVPGSAS 60

Query: 61  SENQNRGAGIYAVPALPSIGGPIVGMASNNLIPLTYSIPTSDTINRTSPEGGAAVEENGR 120
           SENQNRGAGIYAVP+ PS+GGPI+GM +NNLIPLTYSIPTSDT NRTSPEGG+AVEENGR
Sbjct: 61  SENQNRGAGIYAVPSFPSMGGPIIGMTTNNLIPLTYSIPTSDTSNRTSPEGGSAVEENGR 120

Query: 121 V-GQQQ---QQPEPQRQVVVRRFQIAIQIDLLLILKLAALIFLVHQDGSRQRLVVLVICA 180
           V GQQQ   QQ  PQRQVVVRRFQIAIQIDLLLILKLAA+IFLVHQDGSRQRL+VLVICA
Sbjct: 121 VEGQQQPQQQQLAPQRQVVVRRFQIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVICA 180

Query: 181 SLVYLYQTGALTPLIRWLSQGMQRAAAPPQPPRPEVRAEHAPVAPPAARQEAQNAAFAVG 240
           SLVYLYQTGALTPLIRWLSQGMQRAAAPP PPRP VRAE+AP+APPAARQE QNAAFA G
Sbjct: 181 SLVYLYQTGALTPLIRWLSQGMQRAAAPPHPPRPGVRAENAPIAPPAARQEGQNAAFAEG 240

Query: 241 QPVAEEVENQPANEGNRGVENENVAEGGPG--NGGLNWWGVVKEIQMIVFGFITSLLPGF 298
           QP AE VENQPANE NRG ENENVAE G G  NGGLNWWGVVKEIQMIVFGFITSLLPGF
Sbjct: 241 QPGAE-VENQPANEANRGAENENVAEAGAGAGNGGLNWWGVVKEIQMIVFGFITSLLPGF 300

[Close]

BLAST of Cp4.1LG18g06390.1 vs. ExPASy TrEMBL
Match: A0A5D3DXX7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G002330 PE=4 SV=1)

HSP 1 Score: 481 bits (1237), Expect = 2.01e-169
Identity = 263/306 (85.95%), Postives = 278/306 (90.85%), Query Frame = 0


Query: 1   MAEGPEAIPASSQSSSAPEWRDDNLEHTQVPKISSFLT-PNGDFKMIPIMYPILVPGSAP 60
           MAEGPE+IP+SSQSSSA +W+DDNLE TQVPKISSF T PNG+ +MIPIMYP LVPGSA 
Sbjct: 1   MAEGPESIPSSSQSSSALKWQDDNLEQTQVPKISSFPTFPNGNVQMIPIMYPALVPGSAS 60

Query: 61  SENQNRGAGIYAVPALPSIGGPIVGMASNNLIPLTYSIPT-SDTINRTSPEGGAAVEENG 120
           SENQNRGAGIYAVP+ PS+GGPI+GM +NNLIPLTYSIPT SDT NRTSPEGG+AVEENG
Sbjct: 61  SENQNRGAGIYAVPSFPSMGGPIIGMTTNNLIPLTYSIPTRSDTSNRTSPEGGSAVEENG 120

Query: 121 RV-GQQQ---QQPEPQRQVVVRRFQIAIQIDLLLILKLAALIFLVHQDGSRQRLVVLVIC 180
           RV GQQQ   QQP PQRQVVVRRFQIAIQIDLLLILKLAA+IFLVHQDGSRQRL+VLVIC
Sbjct: 121 RVEGQQQPQQQQPAPQRQVVVRRFQIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVIC 180

Query: 181 ASLVYLYQTGALTPLIRWLSQGMQRAAAPPQPPRPEVRAEHAPVAPPAARQEAQNAAFAV 240
           ASLVYLYQTGALTPLIRWLSQGMQRAAAPP PPRP VRAE+AP+APPAARQE QNAAFA 
Sbjct: 181 ASLVYLYQTGALTPLIRWLSQGMQRAAAPPHPPRPGVRAENAPIAPPAARQEGQNAAFAE 240

Query: 241 GQPVAEEVENQPANEGNRGVENENVAEGGPG--NGGLNWWGVVKEIQMIVFGFITSLLPG 298
           GQP AE VENQPANE NRG ENENVAE G G  NGGLNWWGVVKEIQMIVFGFITSLLPG
Sbjct: 241 GQPGAE-VENQPANEANRGAENENVAEAGAGAGNGGLNWWGVVKEIQMIVFGFITSLLPG 300

[Close]

BLAST of Cp4.1LG18g06390.1 vs. ExPASy TrEMBL
Match: A0A5A7UX77 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G005490 PE=4 SV=1)

HSP 1 Score: 477 bits (1227), Expect = 6.70e-168
Identity = 262/306 (85.62%), Postives = 277/306 (90.52%), Query Frame = 0


Query: 1   MAEGPEAIPASSQSSSAPEWRDDNLEHTQVPKISSFLT-PNGDFKMIPIMYPILVPGSAP 60
           MAEGPE+IP+SSQSSSA +W+DDNLE TQVPKISSF T PNG+ +MIPIMYP LVPGSA 
Sbjct: 1   MAEGPESIPSSSQSSSALKWQDDNLEQTQVPKISSFPTFPNGNVQMIPIMYPALVPGSAS 60

Query: 61  SENQNRGAGIYAVPALPSIGGPIVGMASNNLIPLTYSIPT-SDTINRTSPEGGAAVEENG 120
           SENQNRGAGIYAVP+ PS+GGPI+GM +NNLIPLTYSIPT SDT NRTSPEGG+AVEENG
Sbjct: 61  SENQNRGAGIYAVPSFPSMGGPIIGMTTNNLIPLTYSIPTRSDTSNRTSPEGGSAVEENG 120

Query: 121 RV-GQQQ---QQPEPQRQVVVRRFQIAIQIDLLLILKLAALIFLVHQDGSRQRLVVLVIC 180
           RV GQQQ   QQ  PQRQVVVRRFQIAIQIDLLLILKLAA+IFLVHQDGSRQRL+VLVIC
Sbjct: 121 RVEGQQQPQQQQLAPQRQVVVRRFQIAIQIDLLLILKLAAVIFLVHQDGSRQRLIVLVIC 180

Query: 181 ASLVYLYQTGALTPLIRWLSQGMQRAAAPPQPPRPEVRAEHAPVAPPAARQEAQNAAFAV 240
           ASLVYLYQTGALTPLIRWLSQGMQRAAAPP PPRP VRAE+AP+APPAARQE QNAAFA 
Sbjct: 181 ASLVYLYQTGALTPLIRWLSQGMQRAAAPPHPPRPGVRAENAPIAPPAARQEGQNAAFAE 240

Query: 241 GQPVAEEVENQPANEGNRGVENENVAEGGPG--NGGLNWWGVVKEIQMIVFGFITSLLPG 298
           GQP AE VENQPANE NRG ENENVAE G G  NGGLNWWGVVKEIQMIVFGFITSLLPG
Sbjct: 241 GQPGAE-VENQPANEANRGAENENVAEAGAGAGNGGLNWWGVVKEIQMIVFGFITSLLPG 300

[Close]

BLAST of Cp4.1LG18g06390.1 vs. TAIR 10
Match: AT4G29960.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 243.8 bits (621), Expect = 1.7e-64
Identity = 164/306 (53.59%), Postives = 193/306 (63.07%), Query Frame = 0


Query: 1   MAEGPEAIPAS--SQSSSAPEWRDDNLEHTQVPKISSFLT-PNGDFKMIPIMYPILVPGS 60
           M E PE + +S   Q S   +  D  ++       S F   PNGD  M P+ YP LVPGS
Sbjct: 1   MTEEPEKVSSSVLHQPSGDKKPEDVGIKPQDPASSSGFRAYPNGDSPMYPVFYPGLVPGS 60

Query: 61  AP---SENQNRGAGIYAVPALPSIGGPIVGMASNNLIPLTYSIPTSDTINRTSPEGGAAV 120
            P    E  NRGAGIYAVP +   GG + G+ SN LIPLTY++PT+   N  +  GG   
Sbjct: 61  NPVQYEEQMNRGAGIYAVP-VHQFGGHVAGLPSNYLIPLTYNVPTTRP-NNEAETGGENQ 120

Query: 121 EENGRVGQQQQQPEPQRQVVVRRFQIAIQIDLLLILKLAALIFLVHQDGSRQRLVVLVIC 180
            + G+ GQQQQ P  QR VV RRFQIA Q+DL LILKLAA+IFL +QDGSRQRL VLVI 
Sbjct: 121 AQAGQ-GQQQQLPANQRHVVERRFQIAFQLDLFLILKLAAVIFLFNQDGSRQRLAVLVIF 180

Query: 181 ASLVYLYQTGALTPLIRWLSQGMQRAAAPP-QPPRPEVRAEHAPVAPPAARQEAQNAAFA 240
           A+++YLYQTGAL P +RWLSQGM RAA PP +P RP VRA++ P A     + A      
Sbjct: 181 ATIIYLYQTGALAPFVRWLSQGMHRAAVPPARPHRPAVRADNDPAAAVPLNENA------ 240

Query: 241 VGQPVAEEVENQPANEGNR----GVENENVAEGGPGNGGLNWWGVVKEIQMIVFGFITSL 296
               V E  EN+ A+ GNR      ENENV  G  GN    WWG+VKEIQMIVFGFITSL
Sbjct: 241 ----VLEGEENE-ADNGNRARANANENENVDAGNQGN---QWWGIVKEIQMIVFGFITSL 289

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g06390.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG18g06390.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023515835.1	1.05e-204	99.67	uncharacterized protein LOC111779881 [Cucurbita pepo subsp. pepo]	[more]
KAG6589693.1	1.43e-202	98.66	hypothetical protein SDJN03_15116, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7023373.1	7.99e-202	98.32	hypothetical protein SDJN02_14398 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022922023.1	2.77e-200	97.99	uncharacterized protein LOC111430099 [Cucurbita moschata]	[more]
XP_022987221.1	1.08e-197	96.99	uncharacterized protein LOC111484839 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG18g06390.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E5F0	1.34e-200	97.99	uncharacterized protein LOC111430099 OS=Cucurbita moschata OX=3662 GN=LOC1114300...	[more]
A0A6J1JDJ6	5.23e-198	96.99	uncharacterized protein LOC111484839 OS=Cucurbita maxima OX=3661 GN=LOC111484839...	[more]
A0A1S3BWN3	9.61e-170	85.90	uncharacterized protein LOC103494241 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3DXX7	2.01e-169	85.95	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UX77	6.70e-168	85.62	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Cp4.1LG18g06390.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29960.1	1.7e-64	53.59	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 200..222
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 243..262
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR36787:SF1	TRANSMEMBRANE PROTEIN	coord: 1..298
None	No IPR available	PANTHER	PTHR36787	TRANSMEMBRANE PROTEIN	coord: 1..298

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG18g06390	Cp4.1LG18g06390	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG18g06390.1:three_prime_utr:001	Cp4.1LG18g06390.1:three_prime_utr:001	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG18g06390.1:exon:005	Cp4.1LG18g06390.1:exon:005	exon
Cp4.1LG18g06390.1:exon:004	Cp4.1LG18g06390.1:exon:004	exon
Cp4.1LG18g06390.1:exon:003	Cp4.1LG18g06390.1:exon:003	exon
Cp4.1LG18g06390.1:exon:002	Cp4.1LG18g06390.1:exon:002	exon
Cp4.1LG18g06390.1:exon:001	Cp4.1LG18g06390.1:exon:001	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG18g06390.1:cds:001	Cp4.1LG18g06390.1:cds:001	CDS
Cp4.1LG18g06390.1:cds:002	Cp4.1LG18g06390.1:cds:002	CDS
Cp4.1LG18g06390.1:cds:003	Cp4.1LG18g06390.1:cds:003	CDS
Cp4.1LG18g06390.1:cds:004	Cp4.1LG18g06390.1:cds:004	CDS
Cp4.1LG18g06390.1:cds:005	Cp4.1LG18g06390.1:cds:005	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG18g06390.1:five_prime_utr:001	Cp4.1LG18g06390.1:five_prime_utr:001	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG18g06390.1	Cp4.1LG18g06390.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0036503	ERAD pathway
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane