Cp4.1LG18g05770.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG18g05770.1
TypemRNA
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionUnknown protein
LocationCp4.1LG18: 6212369 .. 6218756 (+)
Sequence length3009
RNA-Seq ExpressionCp4.1LG18g05770.1
SyntenyCp4.1LG18g05770.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTTCGAGGTTTGAGGATGAGTGGATTGGCGTCTTGTTGCAGGCGCATTCCATTGTTGGTGGGGCGGCGTCAAATTTGTCTGTTGGGTATGTAATCGTTGATTTGTACATTAAATTTACGCGCGCCGAGTTGGCGCGCAAGGTGTTTGATGTTGTGCTTCAGAGGGATACGGTTCTCTGGAACACAGAGAGTCCGATGTCTATCGAAGTCAAGCTGAAGCATAAGTAAGATTGGAGGCAAGCAAGTAGACAAGAGTGTCAAAAATAGGCTTGATAAGAGCCAAATAGGGCCTCGGATGTTAACCTCAAAAGTCGGAATTTCAATCTGAATTTTGGCGTATGATTTTGGACAAATTTGATGTCAAGTCTGAATCGCTAGGTCCGCAGCTTTCAAATCAGTTGTTCATAAACATCATCGATGTTGAATATTAACTTGCTGTGCTGCAGGTACGCAGCTGGTCATGCTTAAAGCATGGCTTTGCAATTCTCTTGCTTCAGAAATTGTGTGAATCCAGTAATAGTTATTTGCAAAGGAGAATTAATGGTCTTGGCTAGGTACCACAGCTGTTGAGGGTTTTGGAAGTGAATTGTCTACAATGGTTGCATGAAGAATCGATATTTATTCTCTTCTGTATTTATATTTTTGGATACTCAGGGGATCAGTTTGCTGCATCTAAGAAAAAAATTTAAAGAATGCGTCTCCAAGAATGTTAATCCTTGAGGTACTATACTATACTATACATGTGCTGTGTGTTATGTATAATTTTTTTTTCTTAACCTTTCGTTTTCCTTGTGATCAGTTTTACTGGATCTTTCATATCAGTTTTTTTCTCAGTTTTGATTTCTATACTGTTCAATATTATATTATTCTAGAATCTATAAAGAGTTTAGTTTTCTATCAAAAGAAGATAAACAAAGTTCTAAAATTTCTAATAGGTTGAATCAGGGGAATCTTGCTTTCTATATTGTTTACTTTTCTCAATGGACAAGGTGATGATGAAGGTACAAGTACAATACTGTAATTGTCTAAATGAAACACTCTGTTTTGTGTACACAAACTGAAGTAAACAAACACATCATCTTCATTTGTTCTCAAACTAGACACGTTGTCATACTACACAAAAATTTCACTCTTACTTTTATTAATTCTTGTGCTTCACATATTCTAAGTACAATGTCCATGCATATGAATCTCCTGGATATGCACATGAATCTTCTGGTGATGCACACACAAATAAGAAGAAAGAGAGGAAGTATTTCAGCAATTTAGTCCACATTGCTTTGTATCAGGTCCCTTTGTTTTCATCACAAACGGATCAATTCGGACCCAAAGCAAGGAGAAGATTGAAGCCAACAGCACAGACCATATGACGACTATAGTCGGTGTGCGGTTTTGTCGGCCCATCAGACCTTTAAGGAATGGGTAGAGATGAACAATCACCCAGAAGGCAAAGAAAAGCTTCCCAAATAGAGGTCCCCATGATTGATAGCCATTGTTTATGGCATCTGAGATGCCTGCAACAACCCCAACAAGGTTGATGATCAAAATAGTTGTGGGAGGGATTAGCAGAGTGGTCCATTTGAAGGCATATAATTCTCCAAAGTCTTCGTCATCTGTTGCCTTGGATGTAACTGTGAAGCTAGTATCAATTCCAGCCAAAACCTTCAATAGACCTTGTACAACAGCAAATAGATGAGCTGAAATACCACCAATGACCCAGAACTGCTCATTTCTCCACCATTCCTCAATGCTAACTCCACTCCATTTAAGTTCAAGAATACCCGTAGCAAAAATGGAAAGAAACAATGCAATGAAGTAGAAACTTGCAAATGTGCTGATCTGTTTGTCCAAAAGCCAAAGAGAAATTCATCAGTGGATGCAAAATACCTTGCCAGAAACAATGGAGAAAGTAAAAGCTTGATTAATTCGTGTGCTGGACCAGGGCTGACGGCCAAGTAAATTTATCAAACAATATAACTAAAGTTTCAAATTTCCACTTCCATAATATTTTCTGCTTAAATCATCTTTTGTAGGCGATAATGTAAATGTTACTATATTTACCGGTGGCATGATAAACTTATCCGTAAGCAGGCAGATTGCAGGGAGGGTACAGTAGGCGAGAAGTGGTATTGAAGTGAAGGGGTAGACAGTGGTGTTGACATATGCAAATCTCTCTAGCCACTTTAGCTTTCCACCCTTATAGCCATACCAAACAGGGCAGTGGTTGCTGAAAAAAATTTCAATGGACCCGAGCGCCCACCGAAGCACCTGGTTCAGCCGATCAGACAAATTGATGGGAGCTGTACCCTTAAATGCAGGTCTCTTTGGCATGCAGTATATCGATCTCCAGCCACGACAATGCATCTTGAAACCTGTTAGAATATCTTCTGTGATAGATCCGTAAATCCAGCCCAACTGCATTCACAGACATGACACTAGTTTCAGTTCCAAGTCTATCTATCTCTAGACCATATCTGACAATAACTTTTTGTTTGATTTAGGTGTTCGTATGAAATAAAAGGAGGAGGGCGGTCGACATTACCTCGGTACCCCATTCGGTTTTGTCTTCATAACCACAACTGATAACATGAATTGCTTCCTTAAGCAGGGCTGCTGGACCGGAGGAGGGTGGAACACCGCCTTCTTCCATCAAAGTTGAGGTAACAAAAATTGATGAGTGTCCAAATTTCTTTTCAAAATTCATTTGCGACATTAGTAGCTCCTTGTCATCTTCCATCACTACGCATATAGCAGCAAGAGAATAAATGAGTAATCACTATCTGATGGCAAAGTATCCACCAAGACACAAGAACCAAAAAGTTGGAAGTTTGAAAAAAACTCACCTGCAGCATCTCCATCTACCCCACTTTTAGAGCTCTTAAGCTTCTTGCGACGTCCAAAGCATGGACAACAATCGCAGCTTACCATTTTTGGGCGCTTAGGACCTTTTGGGGGTTCATAACCATATAAAGCTTGCCTCCTAAAGACGCACCCTGTGCCAACATATACGGGTCCCTGAATTCCATCTAAACCTCGCATGTTAATCTGCATCACAAAGAAAATAGTTCATTTTTAAGGTTCTTCGCTTAGTTTAGTCACCTGAGAAAATATATATAAAATTTCAGAGATGGGGTCTTTACATCAAAGAAGACTGTGTTTCTGTTGGCATAACGATCATGCCTATCTATTCCATCAAATCTTTGTGGAAATTGCACATAACAGACTTTCTTTCCAACTTGAGGGTCCATAAGGAAACACATGGCTTCTCGTGCTGCTTTGCTATTGTTTATGTAGTGATCACAATCCAAGTTCAACATGAATGGAGCATTTGTAAGCACTGCAGAGACACGGATCTACAATTGAACAAAATATTGGGGATTAGATAAAGGAAAAGGAACAGACTGGGGTTGGGAAGGAGAGAAACTTGACTGAGCAAGTTACCAAGGAATTCATGGCACCGGCTTTCTTGTGATGCTGGAAACCTGGTCTTTTCTCACGAGATACATAAACTAGGCGGGGGAGTTCATTCCCTTCAGCATCAAGGCCTCCACTGTGACCTAGAAAAACTTGGATCATACCGGGATGATCTTTTGTGTTGTTGCCTGGCCATGGTGTTCCATCTTGCATTATCCATCCCTCTGTGGGAACTTTCATGGCTTTCGCTACTTGAGCATTTATTCTGACCTTGAACTCTTCATATTCTCTCTACATGAATCAAAAAATGTTTCAAGCTTGATATTGAGAACATATTGTAAAACTCCTATATGTACCTCTTTTTCAATGTATTTGTTAAAATTGCATACCTTCATTGCTCGTCGCTCTTTCACAAATGTTGGTTGGACTTTATCCTTGAGATAATCAATCTTCTCACAAAAGTACATTTCAGGTGCTCGTGGTTCTATGGAGAACTTCTTACAAAAAGGGACCCATTTCCTTGCAAATTCTGCAGTTTCAGACATTGCTTCAAAGGTAAGCATGGACGCTCCATCGTCCGAAACATAGCATGAAACCTTATCAACTGGATAGTCCATGGCCAAGATAGATAAGATTGTGTTAGCTGTTACAAGAGGAGGTTCCTTCATCGGATCTACAGTACTGACGAAGATGTCTACTGGAGCAAGCAAATTAGGTTCACCCTCTCGTTCATATCTACATTACAACATCCATATGAGTATCTCCGATGATTATATTCTGAACTTTTATACATATTCAACTAACAAAGTTTTCTTTTTTTCCTTCTTCCTTGTCTAGAATTGATATTACCTTAGAGTTAGACGATCCAAGTAGGTTTCACGATCAATTGGGAACCATTTGGGGAACTGATCGAGGATCCATGAGAATGCAAACCAGATTTCACATATCACAGAAGTTAGCCACAAACCCAATGCATCATGCACTGGATTTAGAATCCGATAACGAAGGAAGAAGGCGAGAATAACGAGCCGGGCCACAATAACCATCCGGTAAGGATTAATTTTGCTAGATGCTATCGGTACCTTCCTTGATAGTGGCTGTCTAGCTGCATCATTCCTGCAACAGTTTACAAGTCAATCAATACATAGACTTCCTCGATTGAAAGTTTAAGACATCCGAATTAGGAAGGCAGGCATTGTCAAAATTTTCAAGCATACATAGCCATGTCAGGGTCATTGGCATCATCAGGTTCAGGCCCAAGATTGCCTTGCTGCAATTTCCAATCATCCATTCTATCTTTCCAACCTTCTCTCTTTTCATCCCATCTTGCACTCCCTGATTTTTTGAAAACAAACTTCATGTAGCTTAAAGGAGAGAGATCCAAGTCTTCATCAATTTAATGCAAAAACAATGGGGTTGAGAAAATTTACCTGGTTCAGAAACCGGATATGGATGCACACGTTTGTGCAGCGAAGAAGATAACATCTGCTCTCCATAACCTTGAGAAGATAAAGGAAGCTCACCATTTACCTGCATATGCATTAGATATTAGATGCTTGTTTATAAATCTAATGTTAACTAGGAAAAAAGTTCCACTGAGGCTAGAGAATGAAAGTTTCGCCCACTCACTGGCTGTGTTCTTCCATACTGTGCATTTTCATCATCATCAAGGCCTCTACCATAGCTCATCTTGCCATGAAGCATAGCTTCTGCCAGATGACTGTGGTTGTTCCTTTCATCATCAATGTTGAACTCATGTTCAATGTCATCTATGTCTTCTTCATCATCGTCTCCCTCGACCCTTGGACTCCCTTCACATTACCCAAAAAGAGAGTTTAAGAAAAGAAAAAGTGAAGATGAAACTAGTTATTGCTTTGTTCTGTGCCTTACCTTTGAGTCTCTTATATCTAGTTTTACACTGAGGGCAGAGTTGGCTTCCTTCTCTTCGTTCATACTCATAGCAGGGTCTGCAGACTGGAAAACCACATTCATTGCAAGCAACAAACAGATCACCATCCACAGTAAGCCCCACTTCATCACCACAGATCTCGCAAACTTGACCGTCCAAGTTCTTCAACGGCTTTGGCTGAAGAAGAAAAAACAGAACGGAACAAAACAAAACAAAACAAAACAAAACAAAAACAACCAGATCAGCCACAAACGCACAAACCAAAACTTTCACACACTGACTTTCTGAGTAAGTTAACAACCTCCTCATGGCCATGAATGACAACAAGCTCATTGCGATTGTGAGACCCAGCGACAAGTCCAGCGCTGGCTTCCATGGCTGGCGATCGACAGAGACTAGGTGTTCAGAGAAGGATGAGAGTTTGGAGCAAGGAAGGTGTTTTATGAAGGAGAAAGGTAGAGAAGGAGGAAAAGGGTGGGCATGAGATATTGAACTGTCTTCTTCACCTAATGTGTCCATGTAATGGGTGGTGAGTTGGTTGCTGTGTCAAAGTCCCGTCTTGCCTTGAAGTTAAGTTTCCTCTCCTTCACTGTTCAACCGCCAAGGACCTCTCTTCTACTTCCTTTGCCATCCCAACCATCCAGGTATCATTGTTGTTCGTTTGCTCCTTTCATTAGTAAACTTCTTCTTCATTAATTATATGTTATGATCATCAAAAAGCCCCATAATCAGTGAAGATCATATCTGGTTTTAATGAAGTTAAGCCTTTGTTTAATTCAGCAAATCATCCTCTAAATCATCCTCTAAATCAATAATGTTACACTGTAAGTGAATATTAGGGTTTATTTTTGTGATTCCCATAAAGAATGGAAGGTGAAATGAAGACCATGTTTGGCATGAGAAGAGGTGGTGGGAAAAAGCTGAGAGAGTATGCTTAGAATGCAAGCAGCAGATGCTTAAAATGCAAGAACAACCCCAAAACAACTTCAAATCGTTAGGTAAGGAAGTTGTAGTCTCTCCATCCGCTTCTTGACTGATTAACTTCAAAATTTTCCCGTCTATTTA

mRNA sequence

GCTTCGAGGTTTGAGGATGAGTGGATTGGCGTCTTGTTGCAGGCGCATTCCATTGTTGGTGGGGCGGCGTCAAATTTGTCTGTTGGGTATGTACGCAGCTGGTCATGCTTAAAGCATGGCTTTGCAATTCTCTTGCTTCAGAAATTGTGTGAATCCAGTAATAGTTATTTGCAAAGGAGAATTAATGGTCTTGGCTAGGTACCACAGCTGTTGAGGGTTTTGGAAGTGAATTGTCTACAATGGTTGCATGAAGAATCGATATTTATTCTCTTCTGTATTTATATTTTTGGATACTCAGGGGATCAGTTTGCTGCATCTAAGAAAAAAATTTAAAGAATGCGTCTCCAAGAATGTTAATCCTTGAGGTCCCTTTGTTTTCATCACAAACGGATCAATTCGGACCCAAAGCAAGGAGAAGATTGAAGCCAACAGCACAGACCATATGACGACTATAGTCGGTGTGCGGTTTTGTCGGCCCATCAGACCTTTAAGGAATGGGTAGAGATGAACAATCACCCAGAAGGCAAAGAAAAGCTTCCCAAATAGAGGTCCCCATGATTGATAGCCATTGTTTATGGCATCTGAGATGCCTGCAACAACCCCAACAAGGTTGATGATCAAAATAGTTGTGGGAGGGATTAGCAGAGTGGTCCATTTGAAGGCATATAATTCTCCAAAGTCTTCGTCATCTGTTGCCTTGGATGTAACTGTGAAGCTAGTATCAATTCCAGCCAAAACCTTCAATAGACCTTGTACAACAGCAAATAGATGAGCTGAAATACCACCAATGACCCAGAACTGCTCATTTCTCCACCATTCCTCAATGCTAACTCCACTCCATTTAAGTTCAAGAATACCCGTAGCAAAAATGGAAAGAAACAATGCAATGAAGTAGAAACTTGCAAATGTGCTGATCTGTTTGTCCAAAAGCCAAAGAGAAATTCATCAGTGGATGCAAAATACCTTGCCAGAAACAATGGAGAAAGTAAAAGCTTGATTAATTCGTGTGCTGGACCAGGGCTGACGGCCAAGTAAATTTATCAAACAATATAACTAAAGTTTCAAATTTCCACTTCCATAATATTTTCTGCTTAAATCATCTTTTGTAGGCGATAATGTAAATGTTACTATATTTACCGGTGGCATGATAAACTTATCCGTAAGCAGGCAGATTGCAGGGAGGGTACAGTAGGCGAGAAGTGGTATTGAAGTGAAGGGGTAGACAGTGGTGTTGACATATGCAAATCTCTCTAGCCACTTTAGCTTTCCACCCTTATAGCCATACCAAACAGGGCAGTGGTTGCTGAAAAAAATTTCAATGGACCCGAGCGCCCACCGAAGCACCTGGTTCAGCCGATCAGACAAATTGATGGGAGCTGTACCCTTAAATGCAGGTCTCTTTGGCATGCAGTATATCGATCTCCAGCCACGACAATGCATCTTGAAACCTGTTAGAATATCTTCTGTGATAGATCCGTAAATCCAGCCCAACTGCATTCACAGACATGACACTAGTTTCAGTTCCAAGTCTATCTATCTCTAGACCATATCTGACAATAACTTTTTGTTTGATTTAGGTGTTCGTATGAAATAAAAGGAGGAGGGCGGTCGACATTACCTCGGTACCCCATTCGGTTTTGTCTTCATAACCACAACTGATAACATGAATTGCTTCCTTAAGCAGGGCTGCTGGACCGGAGGAGGGTGGAACACCGCCTTCTTCCATCAAAGTTGAGGTGCTCGTGGTTCTATGGAGAACTTCTTACAAAAAGGGACCCATTTCCTTGCAAATTCTGCAGTTTCAGACATTGCTTCAAAGGTAAGCATGGACGCTCCATCGTCCGAAACATAGCATGAAACCTTATCAACTGGATAGTCCATGGCCAAGATAGATAAGATTGTGTTAGCTGTTACAAGAGGAGGTTCCTTCATCGGATCTACAGTACTGACGAAGATGTCTACTGGAGCAAGCAAATTAGAATTGATATTACCTTAGAGTTAGACGATCCAAGTAGGTTTCACGATCAATTGGGAACCATTTGGGGAACTGATCGAGGATCCATGAGAATGCAAACCAGATTTCACATATCACAGAAGTTAGCCACAAACCCAATGCATCATGCACTGGATTTAGAATCCGATAACGAAGGAAGAAGGCGAGAATAACGAGCCGGGCCACAATAACCATCCGCAGGGTCTGCAGACTGGAAAACCACATTCATTGCAAGCAACAAACAGATCACCATCCACAGTAAGCCCCACTTCATCACCACAGATCTCGCAAACTTGACCGTCCAAGTTCTTCAACGGCTTTGGCTGAAGAAGAAAAAACAGAACGGAACAAAACAAAACAAAACAAAACAAAACAAAAACAACCAGATCAGCCACAAACGCACAAACCAAAACTTTCACACACTGACTTTCTGAGTAAGTTAACAACCTCCTCATGGCCATGAATGACAACAAGCTCATTGCGATTGTGAGACCCAGCGACAAGTCCAGCGCTGGCTTCCATGGCTGGCGATCGACAGAGACTAGGTGTTCAGAGAAGGATGAGAGTTTGGAGCAAGGAAGGTGTTTTATGAAGGAGAAAGGTAGAGAAGGAGGAAAAGGGTGGGCATGAGATATTGAACTGTCTTCTTCACCTAATGTGTCCATGTAATGGGTGGTGAGTTGGTTGCTGTGTCAAAGTCCCGTCTTGCCTTGAAGTTAAGTTTCCTCTCCTTCACTGTTCAACCGCCAAGGACCTCTCTTCTACTTCCTTTGCCATCCCAACCATCCAGGGTTTATTTTTGTGATTCCCATAAAGAATGGAAGGTGAAATGAAGACCATGTTTGGCATGAGAAGAGGTGGTGGGAAAAAGCTGAGAGAGTATGCTTAGAATGCAAGCAGCAGATGCTTAAAATGCAAGAACAACCCCAAAACAACTTCAAATCGTTAGGTAAGGAAGTTGTAGTCTCTCCATCCGCTTCTTGACTGATTAACTTCAAAATTTTCCCGTCTATTTA

Coding sequence (CDS)

GCTTCGAGGTTTGAGGATGAGTGGATTGGCGTCTTGTTGCAGGCGCATTCCATTGTTGGTGGGGCGGCGTCAAATTTGTCTGTTGGGTATGTACGCAGCTGGTCATGCTTAAAGCATGGCTTTGCAATTCTCTTGCTTCAGAAATTGTGTGAATCCAGTAATAGTTATTTGCAAAGGAGAATTAATGGTCTTGGCTAG

Protein sequence

ASRFEDEWIGVLLQAHSIVGGAASNLSVGYVRSWSCLKHGFAILLLQKLCESSNSYLQRRINGLG
Homology
[Close]
BLAST of Cp4.1LG18g05770.1 vs. NCBI nr
Match: KAG7023434.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 57.8 bits (138), Expect = 1.40e-08
Identity = 29/31 (93.55%), Postives = 29/31 (93.55%), Query Frame = 0 

Query: 1  ASRFEDEWIGVLLQAHSIVGGAASNLSVGYV 31
          ASRFEDE IGVLLQAHSIVGGAASNL VGYV
Sbjct: 47 ASRFEDERIGVLLQAHSIVGGAASNLFVGYV 77

[Close]
BLAST of Cp4.1LG18g05770.1 vs. NCBI nr
Match: XP_038889958.1 (pentatricopeptide repeat-containing protein At4g30700-like isoform X2 [Benincasa hispida] >XP_038889959.1 pentatricopeptide repeat-containing protein At4g30700-like isoform X2 [Benincasa hispida])

HSP 1 Score: 47.0 bits (110), Expect = 7.27e-04
Identity = 23/29 (79.31%), Postives = 24/29 (82.76%), Query Frame = 0 

Query: 1   ASRFEDEWIGVLLQAHSIVGGAASNLSVG 29
           ASRFEDE +GVLL AHSIV G ASNL VG
Sbjct: 123 ASRFEDERVGVLLHAHSIVDGVASNLFVG 151

[Close]
BLAST of Cp4.1LG18g05770.1 vs. NCBI nr
Match: XP_038889951.1 (pentatricopeptide repeat-containing protein At4g30700-like isoform X1 [Benincasa hispida] >XP_038889952.1 pentatricopeptide repeat-containing protein At4g30700-like isoform X1 [Benincasa hispida] >XP_038889953.1 pentatricopeptide repeat-containing protein At4g30700-like isoform X1 [Benincasa hispida] >XP_038889954.1 pentatricopeptide repeat-containing protein At4g30700-like isoform X1 [Benincasa hispida] >XP_038889955.1 pentatricopeptide repeat-containing protein At4g30700-like isoform X1 [Benincasa hispida] >XP_038889956.1 pentatricopeptide repeat-containing protein At4g30700-like isoform X1 [Benincasa hispida] >XP_038889957.1 pentatricopeptide repeat-containing protein At4g30700-like isoform X1 [Benincasa hispida])

HSP 1 Score: 47.0 bits (110), Expect = 7.27e-04
Identity = 23/29 (79.31%), Postives = 24/29 (82.76%), Query Frame = 0 

Query: 1   ASRFEDEWIGVLLQAHSIVGGAASNLSVG 29
           ASRFEDE +GVLL AHSIV G ASNL VG
Sbjct: 127 ASRFEDERVGVLLHAHSIVDGVASNLFVG 155

[Close]
BLAST of Cp4.1LG18g05770.1 vs. ExPASy TrEMBL
Match: A0A6J1C0W7 (pentatricopeptide repeat-containing protein At4g30700 OS=Momordica charantia OX=3673 GN=LOC111007429 PE=3 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 9.02e-04
Identity = 23/29 (79.31%), Postives = 23/29 (79.31%), Query Frame = 0 

Query: 1   ASRFEDEWIGVLLQAHSIVGGAASNLSVG 29
           ASRFEDE IG LL AHSIV G ASNL VG
Sbjct: 123 ASRFEDERIGTLLHAHSIVDGVASNLFVG 151

The following BLAST results are available for this feature:
BLAST of Cp4.1LG18g05770.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG18g05770.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7023434.11.40e-0893.55Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_038889958.17.27e-0479.31pentatricopeptide repeat-containing protein At4g30700-like isoform X2 [Benincasa... [more]
XP_038889951.17.27e-0479.31pentatricopeptide repeat-containing protein At4g30700-like isoform X1 [Benincasa... [more]
BLAST of Cp4.1LG18g05770.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1C0W79.02e-0479.31pentatricopeptide repeat-containing protein At4g30700 OS=Momordica charantia OX=... [more]
BLAST of Cp4.1LG18g05770.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cp4.1LG18g05770Cp4.1LG18g05770gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cp4.1LG18g05770.1:exon:001Cp4.1LG18g05770.1:exon:001exon
Cp4.1LG18g05770.1:exon:002Cp4.1LG18g05770.1:exon:002exon
Cp4.1LG18g05770.1:exon:003Cp4.1LG18g05770.1:exon:003exon
Cp4.1LG18g05770.1:exon:004Cp4.1LG18g05770.1:exon:004exon
Cp4.1LG18g05770.1:exon:005Cp4.1LG18g05770.1:exon:005exon
Cp4.1LG18g05770.1:exon:006Cp4.1LG18g05770.1:exon:006exon
Cp4.1LG18g05770.1:exon:007Cp4.1LG18g05770.1:exon:007exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cp4.1LG18g05770.1:cds:001Cp4.1LG18g05770.1:cds:001CDS
Cp4.1LG18g05770.1:cds:002Cp4.1LG18g05770.1:cds:002CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cp4.1LG18g05770.1:three_prime_utr:001Cp4.1LG18g05770.1:three_prime_utr:001three_prime_UTR
Cp4.1LG18g05770.1:three_prime_utr:002Cp4.1LG18g05770.1:three_prime_utr:002three_prime_UTR
Cp4.1LG18g05770.1:three_prime_utr:003Cp4.1LG18g05770.1:three_prime_utr:003three_prime_UTR
Cp4.1LG18g05770.1:three_prime_utr:004Cp4.1LG18g05770.1:three_prime_utr:004three_prime_UTR
Cp4.1LG18g05770.1:three_prime_utr:005Cp4.1LG18g05770.1:three_prime_utr:005three_prime_UTR
Cp4.1LG18g05770.1:three_prime_utr:006Cp4.1LG18g05770.1:three_prime_utr:006three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cp4.1LG18g05770.1Cp4.1LG18g05770.1-proteinpolypeptide