Cp4.1LG17g06720.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG17g06720.1
TypemRNA
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionUnknown protein
LocationCp4.1LG17: 6422821 .. 6423096 (-)
Sequence length276
RNA-Seq ExpressionCp4.1LG17g06720.1
SyntenyCp4.1LG17g06720.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAACGGCGAAGATCAGATTGAAGAACAGCCTTCTTCTTCCCTTCAATCTCATCTTCTTCATCTTCTCAGTTTCCACAGCACAGAGATGAAATCTGTCTACCGGAAACAGCCAAATCCCTTCTCAGACATTTCAACGGATTCGGTTCCGCACCACTCGCTAGCAGTACCCGAGCCACCTCCTCCTGCCCGGCCTCCACGGCGCACCGCAGCGGCGTGTATCCGGCGTCGTCGATGGCGTCCGTATCCGCTCCGTGCTCGAGCAGCGCCTTGA

mRNA sequence

ATGGAGAACGGCGAAGATCAGATTGAAGAACAGCCTTCTTCTTCCCTTCAATCTCATCTTCTTCATCTTCTCAGTTTCCACAGCACAGAGATGAAATCTGTCTACCGGAAACAGCCAAATCCCTTCTCAGACATTTCAACGGATTCGGTTCCGCACCACTCGCTAGCAGTACCCGAGCCACCTCCTCCTGCCCGGCCTCCACGGCGCACCGCAGCGGCGTGTATCCGGCGTCGTCGATGGCGTCCGTATCCGCTCCGTGCTCGAGCAGCGCCTTGA

Coding sequence (CDS)

ATGGAGAACGGCGAAGATCAGATTGAAGAACAGCCTTCTTCTTCCCTTCAATCTCATCTTCTTCATCTTCTCAGTTTCCACAGCACAGAGATGAAATCTGTCTACCGGAAACAGCCAAATCCCTTCTCAGACATTTCAACGGATTCGGTTCCGCACCACTCGCTAGCAGTACCCGAGCCACCTCCTCCTGCCCGGCCTCCACGGCGCACCGCAGCGGCGTGTATCCGGCGTCGTCGATGGCGTCCGTATCCGCTCCGTGCTCGAGCAGCGCCTTGA

Protein sequence

MENGEDQIEEQPSSSLQSHLLHLLSFHSTEMKSVYRKQPNPFSDISTDSVPHHSLAVPEPPPPARPPRRTAAACIRRRRWRPYPLRARAAP
Homology
The following BLAST results are available for this feature:
BLAST of Cp4.1LG17g06720.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG17g06720.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG17g06720.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG17g06720.1 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..50

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cp4.1LG17g06720Cp4.1LG17g06720gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cp4.1LG17g06720.1:exon:001Cp4.1LG17g06720.1:exon:001exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cp4.1LG17g06720.1:cds:001Cp4.1LG17g06720.1:cds:001CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cp4.1LG17g06720.1Cp4.1LG17g06720.1-proteinpolypeptide