Cp4.1LG17g03180.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG17g03180.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	ethylene-responsive transcription factor ERF062-like
Location	Cp4.1LG17: 1669544 .. 1670764 (-)
Sequence length	912
RNA-Seq Expression	Cp4.1LG17g03180.1
Synteny	Cp4.1LG17g03180.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGATCAATTCCCTTTGATTGAAGAACTCAAAAACATCATTCCTAAGGATATTTCATCATCTTCTCCGTCGTCTTTTGAAGAATTCGTCTCTGGATATTACTTTCATGGCGATCCAATTCTCTGGAGCTCCATAGCTCGAGCTTCGTGCTCTGAAAATGGTGATTCTAATGGTAATGATCAATCGAAATCCCCATCTTCTTCTTCTTCTTCTTCGTCGTCTTTTCGACTGTTTTCGAGCGAAAAATCTGAGATTTCTGGTGGGAATTTGATCGAAAACTTTCGAGGAATTCGAAAGTTTGAAAGTAATCTTCACCCAGATGGAGATGGGTTTGTTCCTGTGAATTTCTTGGAGGCTTCTCCGACTCTGTTTCAATCTCGAACAGATTCAACAAATTTGACTCTGTTTCTTCAAGAATCCGCCATTGTTGATCCGTCCCCTCGAAACCCATTTCAAATTCAAGCTCAAAATGGGCTCCAATGGCTGAAGAACAATCATAATCAGAGCCAAGCAGCCGCCATTGCTGCTGTGTCGTCGAGAAATTACAGCGATTTCTGGCTGGGAGCGACGAAGACGCAGCCGATGAAACAGAGTGGGAGAAAACAGGGGAGTCACAAAACAGAGTCGACGGCGACAGCGACGGCGACGGCGACGGCGGTTGGGAAGTTGTTTAGAGGCGTCCGGCAGCGGCACTGGGGGAAATGGGTGGCGGAGATTCGACTTCCAAGAAACCGGACGAGAGTCTGGCTCGGGACATTCGATACCGCCGTCGAAGCCGCCATAGCTTATGACACCGCCGCCTATATGCTGAGAGGGGAATTTGCACATTTAAATTTCCCCGACCAAAAACACCGCCTGAAATCCAATTCTCTCAATCGAACCACGGCGGCGCTGCTGGAAGCGAAGCTGAAAACGATCAGTCAAGAGAACACCAGTAGAAAAAAGACTGCCACCTCCTCTACCATCGCCGCGACTACCACCATACCCACCATTGATTCATCTTCTTCAGAGAAGAGATCCAACTTGAGCCAGAATCCGACGAGGATTTCGCCGGAAAACATGTCGGGGAACGGCGGCAACAATGGCGGATCTGAAACAGGGGAGTTGAAGAGAAACCCAGATGAAATATTTGAAATTGAACAACATCTTCAACTCAGCACAACGCCATCTTTGGACATGGATACGATTTGGGATGCTCTGTTAGTTTCTGATTCATAA

mRNA sequence

ATGGCGGATCAATTCCCTTTGATTGAAGAACTCAAAAACATCATTCCTAAGGATATTTCATCATCTTCTCCGTCGTCTTTTGAAGAATTCGTCTCTGGATATTACTTTCATGGCGATCCAATTCTCTGGAGCTCCATAGCTCGAGCTTCGTGCTCTGAAAATGGTGATTCTAATGGTAATGATCAATCGAAATCCCCATCTTCTTCTTCTTCTTCTTCGTCGTCTTTTCGACTGTTTTCGAGCGAAAAATCTGAGATTTCTGGTGGGAATTTGATCGAAAACTTTCGAGGAATTCGAAAGTTTGAAAGTAATCTTCACCCAGATGGAGATGGGTTTGTTCCTGTGAATTTCTTGGAGGCTTCTCCGACTCTGTTTCAATCTCGAACAGATTCAACAAATTTGACTCTGTTTCTTCAAGAATCCGCCATTGTTGATCCGTCCCCTCGAAACCCATTTCAAATTCAAGCTCAAAATGGGCTCCAATGGCTGAAGAACAATCATAATCAGAGCCAAGCAGCCGCCATTGCTGCTGTGTCGTCGAGAAATTACAGCGATTTCTGGCTGGGAGCGACGAAGACGCAGCCGATGAAACAGACGAAGCTGAAAACGATCAGTCAAGAGAACACCAGTAGAAAAAAGACTGCCACCTCCTCTACCATCGCCGCGACTACCACCATACCCACCATTGATTCATCTTCTTCAGAGAAGAGATCCAACTTGAGCCAGAATCCGACGAGGATTTCGCCGGAAAACATGTCGGGGAACGGCGGCAACAATGGCGGATCTGAAACAGGGGAGTTGAAGAGAAACCCAGATGAAATATTTGAAATTGAACAACATCTTCAACTCAGCACAACGCCATCTTTGGACATGGATACGATTTGGGATGCTCTGTTAGTTTCTGATTCATAA

Coding sequence (CDS)

ATGGCGGATCAATTCCCTTTGATTGAAGAACTCAAAAACATCATTCCTAAGGATATTTCATCATCTTCTCCGTCGTCTTTTGAAGAATTCGTCTCTGGATATTACTTTCATGGCGATCCAATTCTCTGGAGCTCCATAGCTCGAGCTTCGTGCTCTGAAAATGGTGATTCTAATGGTAATGATCAATCGAAATCCCCATCTTCTTCTTCTTCTTCTTCGTCGTCTTTTCGACTGTTTTCGAGCGAAAAATCTGAGATTTCTGGTGGGAATTTGATCGAAAACTTTCGAGGAATTCGAAAGTTTGAAAGTAATCTTCACCCAGATGGAGATGGGTTTGTTCCTGTGAATTTCTTGGAGGCTTCTCCGACTCTGTTTCAATCTCGAACAGATTCAACAAATTTGACTCTGTTTCTTCAAGAATCCGCCATTGTTGATCCGTCCCCTCGAAACCCATTTCAAATTCAAGCTCAAAATGGGCTCCAATGGCTGAAGAACAATCATAATCAGAGCCAAGCAGCCGCCATTGCTGCTGTGTCGTCGAGAAATTACAGCGATTTCTGGCTGGGAGCGACGAAGACGCAGCCGATGAAACAGACGAAGCTGAAAACGATCAGTCAAGAGAACACCAGTAGAAAAAAGACTGCCACCTCCTCTACCATCGCCGCGACTACCACCATACCCACCATTGATTCATCTTCTTCAGAGAAGAGATCCAACTTGAGCCAGAATCCGACGAGGATTTCGCCGGAAAACATGTCGGGGAACGGCGGCAACAATGGCGGATCTGAAACAGGGGAGTTGAAGAGAAACCCAGATGAAATATTTGAAATTGAACAACATCTTCAACTCAGCACAACGCCATCTTTGGACATGGATACGATTTGGGATGCTCTGTTAGTTTCTGATTCATAA

Protein sequence

MADQFPLIEELKNIIPKDISSSSPSSFEEFVSGYYFHGDPILWSSIARASCSENGDSNGNDQSKSPSSSSSSSSSFRLFSSEKSEISGGNLIENFRGIRKFESNLHPDGDGFVPVNFLEASPTLFQSRTDSTNLTLFLQESAIVDPSPRNPFQIQAQNGLQWLKNNHNQSQAAAIAAVSSRNYSDFWLGATKTQPMKQTKLKTISQENTSRKKTATSSTIAATTTIPTIDSSSSEKRSNLSQNPTRISPENMSGNGGNNGGSETGELKRNPDEIFEIEQHLQLSTTPSLDMDTIWDALLVSDS

Homology

[Close]

BLAST of Cp4.1LG17g03180.1 vs. ExPASy Swiss-Prot
Match: Q9SVQ0 (Ethylene-responsive transcription factor ERF062 OS=Arabidopsis thaliana OX=3702 GN=ERF062 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.5e-04
Identity = 40/128 (31.25%), Postives = 60/128 (46.88%), Query Frame = 0


Query: 103 SNLHPDGDGFVPVNFLEASPTLFQSR------TDSTNLTLFLQESAIVDPSPR------- 162
           S++HP     VP NFLE+ P   QS+      +   NLTLFL+E  +++ S         
Sbjct: 113 SSIHPSPVASVPWNFLESFP---QSQHPDHHPSKPPNLTLFLKEPKLLELSQSESNMSPY 172

Query: 163 -----NPFQIQAQNGLQWLKNNHNQSQAAAIAAVSSRNYSDFWLGATKTQPMKQTKLKTI 213
                N F    QN  +W++ N        +    S+ + ++WL  TKTQPMK +K + +
Sbjct: 173 HKYIPNSFYQSDQNRNEWVEIN------KTLTNYPSKGFGNYWLSTTKTQPMK-SKTRKV 230

[Close]

BLAST of Cp4.1LG17g03180.1 vs. NCBI nr
Match: XP_023514723.1 (ethylene-responsive transcription factor ERF062-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 529 bits (1362), Expect = 1.79e-186
Identity = 302/406 (74.38%), Postives = 303/406 (74.63%), Query Frame = 0


Query: 1   MADQFPLIEELKNIIPKDISSSSPSSFEEFVSGYYFHGDPILWSSIARASCSENGDSNGN 60
           MADQFPLIEELKNIIPKDISSSSPSSFEEFVSGYYFHGDPILWSSIARASCSENGDSNGN
Sbjct: 1   MADQFPLIEELKNIIPKDISSSSPSSFEEFVSGYYFHGDPILWSSIARASCSENGDSNGN 60

Query: 61  DQSKSPSSSSSSSSSFRLFSSEKSEISGGNLIENFRGIRKFESNLHPDGDGFVPVNFLEA 120
           DQSKSPSSSSSSSSSFRLFSSEKSEISGGNLIENFRGIRKFESNLHPDGDGFVPVNFLEA
Sbjct: 61  DQSKSPSSSSSSSSSFRLFSSEKSEISGGNLIENFRGIRKFESNLHPDGDGFVPVNFLEA 120

Query: 121 SPTLFQSRTDSTNLTLFLQESAIVDPSPRNPFQIQAQNGLQWLKNNHNQSQAAAIAAVSS 180
           SPTLFQSRTDSTNLTLFLQESAIVDPSPRNPFQIQAQNGLQWLKNNHNQSQAAAIAAVSS
Sbjct: 121 SPTLFQSRTDSTNLTLFLQESAIVDPSPRNPFQIQAQNGLQWLKNNHNQSQAAAIAAVSS 180

Query: 181 RNYSDFWLGATKTQPMKQT----------------------------------------- 240
           RNYSDFWLGATKTQPMKQ+                                         
Sbjct: 181 RNYSDFWLGATKTQPMKQSGRKQGSHKTESTATATATATAVGKLFRGVRQRHWGKWVAEI 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 RLPRNRTRVWLGTFDTAVEAAIAYDTAAYMLRGEFAHLNFPDQKHRLKSNSLNRTTAALL 300

Query: 301 --KLKTISQENTSRKKTATSSTIAATTTIPTIDSSSSEKRSNLSQNPTRISPENMSGNGG 303
             KLKTISQENTSRKKTATSSTIAATTTIPTIDSSSSEKRSNLSQNPTRISPENMSGNGG
Sbjct: 301 EAKLKTISQENTSRKKTATSSTIAATTTIPTIDSSSSEKRSNLSQNPTRISPENMSGNGG 360

[Close]

BLAST of Cp4.1LG17g03180.1 vs. NCBI nr
Match: KAG7026111.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 506 bits (1302), Expect = 1.88e-177
Identity = 293/400 (73.25%), Postives = 296/400 (74.00%), Query Frame = 0


Query: 1   MADQFPLIEELKNIIPKDISSSSPSSFEEFVSGYYFHGDPILWSSIARASCSENGDSNGN 60
           MADQFPLIEELKNIIPKDISSSS SSFEEFVSGYYFHGDPILWSS ARASCSENGDSNGN
Sbjct: 1   MADQFPLIEELKNIIPKDISSSSSSSFEEFVSGYYFHGDPILWSSTARASCSENGDSNGN 60

Query: 61  DQSKSPSSSSSSSSSFRLFSSEKSEISGGNLIENFRGIRKFESNLHPDGDGFVPVNFLEA 120
           DQSKSPSSSSSSSSSFRLFSSEKSEISGGNLIE FRGIRKFESNLHPDGDGFVPV+FLEA
Sbjct: 61  DQSKSPSSSSSSSSSFRLFSSEKSEISGGNLIEKFRGIRKFESNLHPDGDGFVPVDFLEA 120

Query: 121 SPTLFQSRTDSTNLTLFLQESAIVDPSPRNPFQIQAQNGLQWLKNNHNQSQAAAIAAVSS 180
           SPTLFQSRTDSTNLTLFLQESAIVDPSPRNPFQIQAQNGLQWLKNN NQSQAAAIAAVSS
Sbjct: 121 SPTLFQSRTDSTNLTLFLQESAIVDPSPRNPFQIQAQNGLQWLKNNQNQSQAAAIAAVSS 180

Query: 181 RNYSDFWLGATKTQPMKQT----------------------------------------- 240
           RNYSDFWLG TKTQ MKQ+                                         
Sbjct: 181 RNYSDFWLGTTKTQLMKQSGRKQGNHKTESTATAVGKLFRGVRQRHWGKWVAEIRLPRNR 240

Query: 241 --------------------------------------------------------KLKT 300
                                                                   KLKT
Sbjct: 241 TRVWLGTFDTAVEAAIAYDTAAYMLRGEFAHLNFPDQKHRLKSNSLNRTTAALLEAKLKT 300

Query: 301 ISQENTSRKKTATSSTIAATTTIPTIDSSSSEKRSNLSQNPTRISPENMSGNGGNNGGSE 303
           ISQENTSRKKTATS TIAATTTIPTIDSSSSEKRSNLSQNPTRISPENMSG+GGNNGGSE
Sbjct: 301 ISQENTSRKKTATS-TIAATTTIPTIDSSSSEKRSNLSQNPTRISPENMSGSGGNNGGSE 360

[Close]

BLAST of Cp4.1LG17g03180.1 vs. NCBI nr
Match: KAG6593781.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 505 bits (1301), Expect = 2.67e-177
Identity = 292/400 (73.00%), Postives = 297/400 (74.25%), Query Frame = 0


Query: 1   MADQFPLIEELKNIIPKDISSSSPSSFEEFVSGYYFHGDPILWSSIARASCSENGDSNGN 60
           MADQFPL+EELKNIIPKDISSSS SSFEEFVSGYYFHGDPILWSSIARASCSENGDSNGN
Sbjct: 1   MADQFPLMEELKNIIPKDISSSSSSSFEEFVSGYYFHGDPILWSSIARASCSENGDSNGN 60

Query: 61  DQSKSPSSSSSSSSSFRLFSSEKSEISGGNLIENFRGIRKFESNLHPDGDGFVPVNFLEA 120
           DQSKSPSSSSSSSSSFRLFSSEKSEISGGNLIENFRGIRKFESNLHPDGDGFVPV+FLEA
Sbjct: 61  DQSKSPSSSSSSSSSFRLFSSEKSEISGGNLIENFRGIRKFESNLHPDGDGFVPVDFLEA 120

Query: 121 SPTLFQSRTDSTNLTLFLQESAIVDPSPRNPFQIQAQNGLQWLKNNHNQSQAAAIAAVSS 180
           SPTLFQSRTDSTNLTLFLQESAIVDPSPRNPFQIQAQNGLQWLK N NQSQAAAIAA+SS
Sbjct: 121 SPTLFQSRTDSTNLTLFLQESAIVDPSPRNPFQIQAQNGLQWLKKNQNQSQAAAIAAMSS 180

Query: 181 RNYSDFWLGATKTQPMKQT----------------------------------------- 240
           RNYSDFWLG TKTQ MKQ+                                         
Sbjct: 181 RNYSDFWLGTTKTQLMKQSGRKQGNHKTESTATAVGKLFRGVRQRHWGKWVAEIRLPRNR 240

Query: 241 --------------------------------------------------------KLKT 300
                                                                   KLKT
Sbjct: 241 TRVWLGTFDTAVEAAIAYDTAAYMLRGEFAHLNFPDQKHRLKSNSLNRTTAALLEAKLKT 300

Query: 301 ISQENTSRKKTATSSTIAATTTIPTIDSSSSEKRSNLSQNPTRISPENMSGNGGNNGGSE 303
           ISQENTSRKKTATS TIAATTTIPTIDSSSSEKRSNLSQNPTRISPENMSG+GGNNGGSE
Sbjct: 301 ISQENTSRKKTATS-TIAATTTIPTIDSSSSEKRSNLSQNPTRISPENMSGSGGNNGGSE 360

[Close]

BLAST of Cp4.1LG17g03180.1 vs. NCBI nr
Match: XP_023000036.1 (ethylene-responsive transcription factor ERF062-like isoform X3 [Cucurbita maxima])

HSP 1 Score: 499 bits (1284), Expect = 1.03e-174
Identity = 289/395 (73.16%), Postives = 291/395 (73.67%), Query Frame = 0


Query: 1   MADQFPLIEELKNIIPKDISSSSPSSFEEFVSGYYFHGDPILWSSIARASCSENGDSNGN 60
           MADQFPLIEELKNIIPK ISSSS SSFEEFVSGYYFHGDPILWSSIARASCSENGDS GN
Sbjct: 1   MADQFPLIEELKNIIPKGISSSSSSSFEEFVSGYYFHGDPILWSSIARASCSENGDSTGN 60

Query: 61  DQSKSPSSSSSSSSSFRLFSSEKSEISGGNLIENFRGIRKFESNLHPDGDGFVPVNFLEA 120
           DQSKSPSSSSSSSSSFRLFSSEKSEISGGNLIENFRGIRKFESNLHPDGDGFVPVNFLEA
Sbjct: 61  DQSKSPSSSSSSSSSFRLFSSEKSEISGGNLIENFRGIRKFESNLHPDGDGFVPVNFLEA 120

Query: 121 SPTLFQSRTDSTNLTLFLQESAIVDPSPRNPFQIQAQNGLQWLKNNHNQSQAAAIAAVSS 180
           SPTLFQ+RTDSTNLTLFLQESAIVDPSPRNPFQIQAQNGLQWLKNNHNQSQAAAIAAVSS
Sbjct: 121 SPTLFQARTDSTNLTLFLQESAIVDPSPRNPFQIQAQNGLQWLKNNHNQSQAAAIAAVSS 180

Query: 181 RNYSDFWLGATKTQPMKQT----------------------------------------- 240
           RNYSDFWLGATKTQPMKQ+                                         
Sbjct: 181 RNYSDFWLGATKTQPMKQSGRKQGNHKTESTATAVGKLFRGVRQRHWGKWVAEIRLPRNR 240

Query: 241 --------------------------------------------------------KLKT 298
                                                                   KLKT
Sbjct: 241 TRVWLGTFDTAVEAAIAYDTAAYMLRGEFAHLNFPDQKHRLKSNSLNRTTAALLEAKLKT 300

[Close]

BLAST of Cp4.1LG17g03180.1 vs. NCBI nr
Match: XP_023000035.1 (ethylene-responsive transcription factor ERF062-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 499 bits (1286), Expect = 1.11e-174
Identity = 290/397 (73.05%), Postives = 292/397 (73.55%), Query Frame = 0


Query: 1   MADQFPLIEELKNIIPKDISSSSPSSFEEFVSGYYFHGDPILWSSIARASCSENGDSNGN 60
           MADQFPLIEELKNIIPK ISSSS SSFEEFVSGYYFHGDPILWSSIARASCSENGDS GN
Sbjct: 1   MADQFPLIEELKNIIPKGISSSSSSSFEEFVSGYYFHGDPILWSSIARASCSENGDSTGN 60

Query: 61  DQSKSPSSSSSSSSSFRLFSSEKSEISGGNLIENFRGIRKFESNLHPDGDGFVPVNFLEA 120
           DQSKSPSSSSSSSSSFRLFSSEKSEISGGNLIENFRGIRKFESNLHPDGDGFVPVNFLEA
Sbjct: 61  DQSKSPSSSSSSSSSFRLFSSEKSEISGGNLIENFRGIRKFESNLHPDGDGFVPVNFLEA 120

Query: 121 SPTLFQSRTDSTNLTLFLQESAIVDPSPRNPFQIQAQNGLQWLKNNHNQSQAAAIAAVSS 180
           SPTLFQ+RTDSTNLTLFLQESAIVDPSPRNPFQIQAQNGLQWLKNNHNQSQAAAIAAVSS
Sbjct: 121 SPTLFQARTDSTNLTLFLQESAIVDPSPRNPFQIQAQNGLQWLKNNHNQSQAAAIAAVSS 180

Query: 181 RNYSDFWLGATKTQPMKQT----------------------------------------- 240
           RNYSDFWLGATKTQPMKQ+                                         
Sbjct: 181 RNYSDFWLGATKTQPMKQSGRKQGNHKTESTATAVGKLFRGVRQRHWGKWVAEIRLPRNR 240

Query: 241 --------------------------------------------------------KLKT 300
                                                                   KLKT
Sbjct: 241 TRVWLGTFDTAVEAAIAYDTAAYMLRGEFAHLNFPDQKHRLKSNSLNRTTAALLEAKLKT 300

[Close]

BLAST of Cp4.1LG17g03180.1 vs. ExPASy TrEMBL
Match: A0A6J1KER8 (ethylene-responsive transcription factor ERF062-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111494343 PE=4 SV=1)

HSP 1 Score: 499 bits (1284), Expect = 4.99e-175
Identity = 289/395 (73.16%), Postives = 291/395 (73.67%), Query Frame = 0


Query: 1   MADQFPLIEELKNIIPKDISSSSPSSFEEFVSGYYFHGDPILWSSIARASCSENGDSNGN 60
           MADQFPLIEELKNIIPK ISSSS SSFEEFVSGYYFHGDPILWSSIARASCSENGDS GN
Sbjct: 1   MADQFPLIEELKNIIPKGISSSSSSSFEEFVSGYYFHGDPILWSSIARASCSENGDSTGN 60

Query: 61  DQSKSPSSSSSSSSSFRLFSSEKSEISGGNLIENFRGIRKFESNLHPDGDGFVPVNFLEA 120
           DQSKSPSSSSSSSSSFRLFSSEKSEISGGNLIENFRGIRKFESNLHPDGDGFVPVNFLEA
Sbjct: 61  DQSKSPSSSSSSSSSFRLFSSEKSEISGGNLIENFRGIRKFESNLHPDGDGFVPVNFLEA 120

Query: 121 SPTLFQSRTDSTNLTLFLQESAIVDPSPRNPFQIQAQNGLQWLKNNHNQSQAAAIAAVSS 180
           SPTLFQ+RTDSTNLTLFLQESAIVDPSPRNPFQIQAQNGLQWLKNNHNQSQAAAIAAVSS
Sbjct: 121 SPTLFQARTDSTNLTLFLQESAIVDPSPRNPFQIQAQNGLQWLKNNHNQSQAAAIAAVSS 180

Query: 181 RNYSDFWLGATKTQPMKQT----------------------------------------- 240
           RNYSDFWLGATKTQPMKQ+                                         
Sbjct: 181 RNYSDFWLGATKTQPMKQSGRKQGNHKTESTATAVGKLFRGVRQRHWGKWVAEIRLPRNR 240

Query: 241 --------------------------------------------------------KLKT 298
                                                                   KLKT
Sbjct: 241 TRVWLGTFDTAVEAAIAYDTAAYMLRGEFAHLNFPDQKHRLKSNSLNRTTAALLEAKLKT 300

[Close]

BLAST of Cp4.1LG17g03180.1 vs. ExPASy TrEMBL
Match: A0A6J1KH84 (ethylene-responsive transcription factor ERF062-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111494343 PE=4 SV=1)

HSP 1 Score: 499 bits (1286), Expect = 5.38e-175
Identity = 290/397 (73.05%), Postives = 292/397 (73.55%), Query Frame = 0


Query: 1   MADQFPLIEELKNIIPKDISSSSPSSFEEFVSGYYFHGDPILWSSIARASCSENGDSNGN 60
           MADQFPLIEELKNIIPK ISSSS SSFEEFVSGYYFHGDPILWSSIARASCSENGDS GN
Sbjct: 1   MADQFPLIEELKNIIPKGISSSSSSSFEEFVSGYYFHGDPILWSSIARASCSENGDSTGN 60

Query: 61  DQSKSPSSSSSSSSSFRLFSSEKSEISGGNLIENFRGIRKFESNLHPDGDGFVPVNFLEA 120
           DQSKSPSSSSSSSSSFRLFSSEKSEISGGNLIENFRGIRKFESNLHPDGDGFVPVNFLEA
Sbjct: 61  DQSKSPSSSSSSSSSFRLFSSEKSEISGGNLIENFRGIRKFESNLHPDGDGFVPVNFLEA 120

Query: 121 SPTLFQSRTDSTNLTLFLQESAIVDPSPRNPFQIQAQNGLQWLKNNHNQSQAAAIAAVSS 180
           SPTLFQ+RTDSTNLTLFLQESAIVDPSPRNPFQIQAQNGLQWLKNNHNQSQAAAIAAVSS
Sbjct: 121 SPTLFQARTDSTNLTLFLQESAIVDPSPRNPFQIQAQNGLQWLKNNHNQSQAAAIAAVSS 180

Query: 181 RNYSDFWLGATKTQPMKQT----------------------------------------- 240
           RNYSDFWLGATKTQPMKQ+                                         
Sbjct: 181 RNYSDFWLGATKTQPMKQSGRKQGNHKTESTATAVGKLFRGVRQRHWGKWVAEIRLPRNR 240

Query: 241 --------------------------------------------------------KLKT 300
                                                                   KLKT
Sbjct: 241 TRVWLGTFDTAVEAAIAYDTAAYMLRGEFAHLNFPDQKHRLKSNSLNRTTAALLEAKLKT 300

[Close]

BLAST of Cp4.1LG17g03180.1 vs. ExPASy TrEMBL
Match: A0A6J1HKB4 (ethylene-responsive transcription factor ERF062-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111464330 PE=4 SV=1)

HSP 1 Score: 498 bits (1282), Expect = 9.36e-175
Identity = 289/397 (72.80%), Postives = 292/397 (73.55%), Query Frame = 0


Query: 1   MADQFPLIEELKNIIPKDISSSSPSSFEEFVSGYYFHGDPILWSSIARASCSENGDSNGN 60
           MADQFPL+EELKNIIPKDISSSS SSFEEFVSGYYFHGDPILWSSIARASCSENGDSNGN
Sbjct: 1   MADQFPLMEELKNIIPKDISSSSSSSFEEFVSGYYFHGDPILWSSIARASCSENGDSNGN 60

Query: 61  DQSKSPSSSSSSSSSFRLFSSEKSEISGGNLIENFRGIRKFESNLHPDGDGFVPVNFLEA 120
           DQSKSPSSSSSSSSSFRLFSSEKSEISGGNLIENFRGIRKFESNLHPDGDGFVPVNFLEA
Sbjct: 61  DQSKSPSSSSSSSSSFRLFSSEKSEISGGNLIENFRGIRKFESNLHPDGDGFVPVNFLEA 120

Query: 121 SPTLFQSRTDSTNLTLFLQESAIVDPSPRNPFQIQAQNGLQWLKNNHNQSQAAAIAAVSS 180
           SPTLFQSRTDSTNLTLFLQ SAIVDPSPRNPFQIQAQNGLQWLKNN NQSQAAAIAAVSS
Sbjct: 121 SPTLFQSRTDSTNLTLFLQGSAIVDPSPRNPFQIQAQNGLQWLKNNQNQSQAAAIAAVSS 180

Query: 181 RNYSDFWLGATKTQPMKQT----------------------------------------- 240
           RNYSDFWLG TKTQ MKQ+                                         
Sbjct: 181 RNYSDFWLGTTKTQLMKQSGRKQGNHKTESTATAVGKLFRGVRQRHWGKWVAEIRLPRNR 240

Query: 241 --------------------------------------------------------KLKT 300
                                                                   KLKT
Sbjct: 241 TRVWLGTFDTAVEAAIAYDTAAYMLRGEFAHLNFPDQKHRLKSNSLNRTTAALLEAKLKT 300

[Close]

BLAST of Cp4.1LG17g03180.1 vs. ExPASy TrEMBL
Match: A0A6J1KIS5 (ethylene-responsive transcription factor ERF062-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111494343 PE=4 SV=1)

HSP 1 Score: 499 bits (1284), Expect = 1.12e-174
Identity = 289/395 (73.16%), Postives = 291/395 (73.67%), Query Frame = 0


Query: 1   MADQFPLIEELKNIIPKDISSSSPSSFEEFVSGYYFHGDPILWSSIARASCSENGDSNGN 60
           MADQFPLIEELKNIIPK ISSSS SSFEEFVSGYYFHGDPILWSSIARASCSENGDS GN
Sbjct: 1   MADQFPLIEELKNIIPKGISSSSSSSFEEFVSGYYFHGDPILWSSIARASCSENGDSTGN 60

Query: 61  DQSKSPSSSSSSSSSFRLFSSEKSEISGGNLIENFRGIRKFESNLHPDGDGFVPVNFLEA 120
           DQSKSPSSSSSSSSSFRLFSSEKSEISGGNLIENFRGIRKFESNLHPDGDGFVPVNFLEA
Sbjct: 61  DQSKSPSSSSSSSSSFRLFSSEKSEISGGNLIENFRGIRKFESNLHPDGDGFVPVNFLEA 120

Query: 121 SPTLFQSRTDSTNLTLFLQESAIVDPSPRNPFQIQAQNGLQWLKNNHNQSQAAAIAAVSS 180
           SPTLFQ+RTDSTNLTLFLQESAIVDPSPRNPFQIQAQNGLQWLKNNHNQSQAAAIAAVSS
Sbjct: 121 SPTLFQARTDSTNLTLFLQESAIVDPSPRNPFQIQAQNGLQWLKNNHNQSQAAAIAAVSS 180

Query: 181 RNYSDFWLGATKTQPMKQT----------------------------------------- 240
           RNYSDFWLGATKTQPMKQ+                                         
Sbjct: 181 RNYSDFWLGATKTQPMKQSGRKQGNHKTESTATAVGKLFRGVRQRHWGKWVAEIRLPRNR 240

Query: 241 --------------------------------------------------------KLKT 298
                                                                   KLKT
Sbjct: 241 TRVWLGTFDTAVEAAIAYDTAAYMLRGEFAHLNFPDQKHRLKSNSLNRTTAALLEAKLKT 300

[Close]

BLAST of Cp4.1LG17g03180.1 vs. ExPASy TrEMBL
Match: A0A6J1HKA5 (ethylene-responsive transcription factor ERF062-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111464330 PE=4 SV=1)

HSP 1 Score: 497 bits (1280), Expect = 2.03e-174
Identity = 288/395 (72.91%), Postives = 291/395 (73.67%), Query Frame = 0


Query: 1   MADQFPLIEELKNIIPKDISSSSPSSFEEFVSGYYFHGDPILWSSIARASCSENGDSNGN 60
           MADQFPL+EELKNIIPKDISSSS SSFEEFVSGYYFHGDPILWSSIARASCSENGDSNGN
Sbjct: 1   MADQFPLMEELKNIIPKDISSSSSSSFEEFVSGYYFHGDPILWSSIARASCSENGDSNGN 60

Query: 61  DQSKSPSSSSSSSSSFRLFSSEKSEISGGNLIENFRGIRKFESNLHPDGDGFVPVNFLEA 120
           DQSKSPSSSSSSSSSFRLFSSEKSEISGGNLIENFRGIRKFESNLHPDGDGFVPVNFLEA
Sbjct: 61  DQSKSPSSSSSSSSSFRLFSSEKSEISGGNLIENFRGIRKFESNLHPDGDGFVPVNFLEA 120

Query: 121 SPTLFQSRTDSTNLTLFLQESAIVDPSPRNPFQIQAQNGLQWLKNNHNQSQAAAIAAVSS 180
           SPTLFQSRTDSTNLTLFLQ SAIVDPSPRNPFQIQAQNGLQWLKNN NQSQAAAIAAVSS
Sbjct: 121 SPTLFQSRTDSTNLTLFLQGSAIVDPSPRNPFQIQAQNGLQWLKNNQNQSQAAAIAAVSS 180

Query: 181 RNYSDFWLGATKTQPMKQT----------------------------------------- 240
           RNYSDFWLG TKTQ MKQ+                                         
Sbjct: 181 RNYSDFWLGTTKTQLMKQSGRKQGNHKTESTATAVGKLFRGVRQRHWGKWVAEIRLPRNR 240

Query: 241 --------------------------------------------------------KLKT 298
                                                                   KLKT
Sbjct: 241 TRVWLGTFDTAVEAAIAYDTAAYMLRGEFAHLNFPDQKHRLKSNSLNRTTAALLEAKLKT 300

[Close]

BLAST of Cp4.1LG17g03180.1 vs. TAIR 10
Match: AT4G13620.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 48.5 bits (114), Expect = 1.1e-05
Identity = 40/128 (31.25%), Postives = 60/128 (46.88%), Query Frame = 0


Query: 103 SNLHPDGDGFVPVNFLEASPTLFQSR------TDSTNLTLFLQESAIVDPSPR------- 162
           S++HP     VP NFLE+ P   QS+      +   NLTLFL+E  +++ S         
Sbjct: 113 SSIHPSPVASVPWNFLESFP---QSQHPDHHPSKPPNLTLFLKEPKLLELSQSESNMSPY 172

Query: 163 -----NPFQIQAQNGLQWLKNNHNQSQAAAIAAVSSRNYSDFWLGATKTQPMKQTKLKTI 213
                N F    QN  +W++ N        +    S+ + ++WL  TKTQPMK +K + +
Sbjct: 173 HKYIPNSFYQSDQNRNEWVEIN------KTLTNYPSKGFGNYWLSTTKTQPMK-SKTRKV 230

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g03180.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SVQ0	1.5e-04	31.25	Ethylene-responsive transcription factor ERF062 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Cp4.1LG17g03180.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023514723.1	1.79e-186	74.38	ethylene-responsive transcription factor ERF062-like [Cucurbita pepo subsp. pepo...	[more]
KAG7026111.1	1.88e-177	73.25	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
KAG6593781.1	2.67e-177	73.00	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
XP_023000036.1	1.03e-174	73.16	ethylene-responsive transcription factor ERF062-like isoform X3 [Cucurbita maxim...	[more]
XP_023000035.1	1.11e-174	73.05	ethylene-responsive transcription factor ERF062-like isoform X2 [Cucurbita maxim...	[more]

BLAST of Cp4.1LG17g03180.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KER8	4.99e-175	73.16	ethylene-responsive transcription factor ERF062-like isoform X3 OS=Cucurbita max...	[more]
A0A6J1KH84	5.38e-175	73.05	ethylene-responsive transcription factor ERF062-like isoform X2 OS=Cucurbita max...	[more]
A0A6J1HKB4	9.36e-175	72.80	ethylene-responsive transcription factor ERF062-like isoform X2 OS=Cucurbita mos...	[more]
A0A6J1KIS5	1.12e-174	73.16	ethylene-responsive transcription factor ERF062-like isoform X1 OS=Cucurbita max...	[more]
A0A6J1HKA5	2.03e-174	72.91	ethylene-responsive transcription factor ERF062-like isoform X1 OS=Cucurbita mos...	[more]

BLAST of Cp4.1LG17g03180.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G13620.1	1.1e-05	31.25	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..273
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..265
None	No IPR available	PANTHER	PTHR31657:SF40	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF062	coord: 27..218
None	No IPR available	PANTHER	PTHR31657:SF40	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF062	coord: 199..302
None	No IPR available	PANTHER	PTHR31657	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061	coord: 27..218
None	No IPR available	PANTHER	PTHR31657	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061	coord: 199..302

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG17g03180	Cp4.1LG17g03180	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG17g03180.1:exon:002	Cp4.1LG17g03180.1:exon:002	exon
Cp4.1LG17g03180.1:exon:001	Cp4.1LG17g03180.1:exon:001	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG17g03180.1:cds:002	Cp4.1LG17g03180.1:cds:002	CDS
Cp4.1LG17g03180.1:cds:001	Cp4.1LG17g03180.1:cds:001	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG17g03180.1	Cp4.1LG17g03180.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding