Cp4.1LG15g00490.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG15g00490.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	U3 small nucleolar RNA-associated protein 18 homolog
Location	Cp4.1LG15: 323809 .. 325551 (+)
Sequence length	1743
RNA-Seq Expression	Cp4.1LG15g00490.1
Synteny	Cp4.1LG15g00490.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTGGTTTTGCAGGAGCTGAGTGGAAGATGAGTTTAATATCTCAAAATGTTGCTGTAATTAGTAGTACTGAGAAGGTTAATGGGGATAATACTGTTGGCTCTTCATCTCTGTTGAGAAAAGTAGATGCTAGTGATGTAGAAAACTCTGGTGCGGATACTACTAGGGCAAAGAAGAGAAAGAAAGAACACAAAAAAGAAGATGAACAAATAGTAAAAGAACAACAAAAGGAAATGGAGAAGCTCGAAAACTTTCTTTTTGGATCACTCTATTCCCCTGTTGAATTTGGGAAGGATGAAGAGAAAAATGATTTCAGTGCTGAAGAAAAGGCTCCTGCTTTGTACATTATGGACCGCTCTGCAAATAATTCCCTTTCCGTGTATGAAAATGATGTTGGGCTCCTAGATGAGAGCTCGAGTAAGGAGGAAGCTCAGCAAAGAAAACCGGTATGGGTCGACGAGGAAGAGGAGAAGGCCTCAGTTAATATTACTAATGTTAGTAGACTGAGAAAATTGAGGAAGGAAGAAGATGAGAAATCGATTTCGGGTTCAGAGTATGTGTCGCGACTGAGGGCTCAGCATGCCAAGCTAAACCCCGGAACCGAGTGGGCTCAACTTGATGCACAATCCAGGGGTGGCAGTGATGATGATGATGATCTATCATCAGATGATGAAAATGCAGTTGCATTGGCTGATGGTTACGATAATGTCGATTCTATCGATGATATCCTTAGAACAAATGAGAATCTTGTAGCGAAGAGTGGTGCTAAATTGTTGCCTGGTCTTCTTGAATACTCGAGACTTGTCGATGCGAACGCACAGGAGCCATCAAATGGTCCTATCCATTCGGTCCAGTTTCATCGCAATGCTCAGTTACTGCTAGCTACTGGGTTGGATCGGAAGCTTCGATTTTTTCAGATTGATGGGAAACGGAATACCAAAATTCAGAGCATTTTTCTCGAGGATTGCCCCATACGAAAGGCATCATTTTTGCCTGATGGATCTCAGGTCATCATATCTGGGAGGAGAAAGTTCTTCTATAGCCTCGATCTAGTGAAGGCAAAAGTAGATAAAATAGGCCCTCTTGTAGGTAGAGAGGAGAAAAGCCTTGAAGTTTTTGAAGTTTCTCCTGATTCTAGCACGGTCGCATTCATAGGTAATGAAGGCTATATCCTGTTAGTGTCGACCAAAACAAAGGAGCTAATCGGGACGCTTAAGATGAATGGAACTGTTCGTTCCTTGGCGTTTGCCGACGATGGACAACAGCTACTGAGCTCTGGTGGCGACGGGCAGGTCTACCACTGGGATCTGAGAACAAGAACGTGCATCCACAAGGCTGTCGACGAAGGTTGCATCAATGGCACAGCACTTTGTACGTCTCCTAACGGAGCATTGTTTGCAGCGGGTTCTGACAGTGGGATCGTTAACATCTACAACAGACAAGAATTCTTAGGGGGCAAGAAGAAGCCATTGAAGGCCATTGAGAATCTGACCACCAAAGTAGACTTTCTCAAGTTCAATCACGATGCTCAAATATTGGCAATCTGTTCAAGGATGAAGAAAAGTAGTTTGAAGCTGATACACGTACCTTCTTTTACCATATTTTCGAACTGGCCGCCGCCGAAGAAGAACCTTCAGTACCCTTCATGCTTGGATTTCAGCCCCGAAGGAGGCTACATGGCTGTCGGAAATGCTGCTGGAAAGGTATTGTTGTATAAACTACATCATTATCAGCATGCTTAG

mRNA sequence

ATGATTGGTTTTGCAGGAGCTGAGTGGAAGATGAGTTTAATATCTCAAAATGTTGCTGTAATTAGTAGTACTGAGAAGGTTAATGGGGATAATACTGTTGGCTCTTCATCTCTGTTGAGAAAAGTAGATGCTAGTGATGTAGAAAACTCTGGTGCGGATACTACTAGGGCAAAGAAGAGAAAGAAAGAACACAAAAAAGAAGATGAACAAATAGTAAAAGAACAACAAAAGGAAATGGAGAAGCTCGAAAACTTTCTTTTTGGATCACTCTATTCCCCTGTTGAATTTGGGAAGGATGAAGAGAAAAATGATTTCAGTGCTGAAGAAAAGGCTCCTGCTTTGTACATTATGGACCGCTCTGCAAATAATTCCCTTTCCGTGTATGAAAATGATGTTGGGCTCCTAGATGAGAGCTCGAGTAAGGAGGAAGCTCAGCAAAGAAAACCGGTATGGGTCGACGAGGAAGAGGAGAAGGCCTCAGTTAATATTACTAATGTTAGTAGACTGAGAAAATTGAGGAAGGAAGAAGATGAGAAATCGATTTCGGGTTCAGAGTATGTGTCGCGACTGAGGGCTCAGCATGCCAAGCTAAACCCCGGAACCGAGTGGGCTCAACTTGATGCACAATCCAGGGGTGGCAGTGATGATGATGATGATCTATCATCAGATGATGAAAATGCAGTTGCATTGGCTGATGGTTACGATAATGTCGATTCTATCGATGATATCCTTAGAACAAATGAGAATCTTGTAGCGAAGAGTGGTGCTAAATTGTTGCCTGGTCTTCTTGAATACTCGAGACTTGTCGATGCGAACGCACAGGAGCCATCAAATGGTCCTATCCATTCGGTCCAGTTTCATCGCAATGCTCAGTTACTGCTAGCTACTGGGTTGGATCGGAAGCTTCGATTTTTTCAGATTGATGGGAAACGGAATACCAAAATTCAGAGCATTTTTCTCGAGGATTGCCCCATACGAAAGGCATCATTTTTGCCTGATGGATCTCAGGTCATCATATCTGGGAGGAGAAAGTTCTTCTATAGCCTCGATCTAGTGAAGGCAAAAGTAGATAAAATAGGCCCTCTTGTAGGTAGAGAGGAGAAAAGCCTTGAAGTTTTTGAAGTTTCTCCTGATTCTAGCACGGTCGCATTCATAGGTAATGAAGGCTATATCCTGTTAGTGTCGACCAAAACAAAGGAGCTAATCGGGACGCTTAAGATGAATGGAACTGTTCGTTCCTTGGCGTTTGCCGACGATGGACAACAGCTACTGAGCTCTGGTGGCGACGGGCAGGTCTACCACTGGGATCTGAGAACAAGAACGTGCATCCACAAGGCTGTCGACGAAGGTTGCATCAATGGCACAGCACTTTGTACGTCTCCTAACGGAGCATTGTTTGCAGCGGGTTCTGACAGTGGGATCGTTAACATCTACAACAGACAAGAATTCTTAGGGGGCAAGAAGAAGCCATTGAAGGCCATTGAGAATCTGACCACCAAAGTAGACTTTCTCAAGTTCAATCACGATGCTCAAATATTGGCAATCTGTTCAAGGATGAAGAAAAGTAGTTTGAAGCTGATACACGTACCTTCTTTTACCATATTTTCGAACTGGCCGCCGCCGAAGAAGAACCTTCAGTACCCTTCATGCTTGGATTTCAGCCCCGAAGGAGGCTACATGGCTGTCGGAAATGCTGCTGGAAAGGTATTGTTGTATAAACTACATCATTATCAGCATGCTTAG

Coding sequence (CDS)

ATGATTGGTTTTGCAGGAGCTGAGTGGAAGATGAGTTTAATATCTCAAAATGTTGCTGTAATTAGTAGTACTGAGAAGGTTAATGGGGATAATACTGTTGGCTCTTCATCTCTGTTGAGAAAAGTAGATGCTAGTGATGTAGAAAACTCTGGTGCGGATACTACTAGGGCAAAGAAGAGAAAGAAAGAACACAAAAAAGAAGATGAACAAATAGTAAAAGAACAACAAAAGGAAATGGAGAAGCTCGAAAACTTTCTTTTTGGATCACTCTATTCCCCTGTTGAATTTGGGAAGGATGAAGAGAAAAATGATTTCAGTGCTGAAGAAAAGGCTCCTGCTTTGTACATTATGGACCGCTCTGCAAATAATTCCCTTTCCGTGTATGAAAATGATGTTGGGCTCCTAGATGAGAGCTCGAGTAAGGAGGAAGCTCAGCAAAGAAAACCGGTATGGGTCGACGAGGAAGAGGAGAAGGCCTCAGTTAATATTACTAATGTTAGTAGACTGAGAAAATTGAGGAAGGAAGAAGATGAGAAATCGATTTCGGGTTCAGAGTATGTGTCGCGACTGAGGGCTCAGCATGCCAAGCTAAACCCCGGAACCGAGTGGGCTCAACTTGATGCACAATCCAGGGGTGGCAGTGATGATGATGATGATCTATCATCAGATGATGAAAATGCAGTTGCATTGGCTGATGGTTACGATAATGTCGATTCTATCGATGATATCCTTAGAACAAATGAGAATCTTGTAGCGAAGAGTGGTGCTAAATTGTTGCCTGGTCTTCTTGAATACTCGAGACTTGTCGATGCGAACGCACAGGAGCCATCAAATGGTCCTATCCATTCGGTCCAGTTTCATCGCAATGCTCAGTTACTGCTAGCTACTGGGTTGGATCGGAAGCTTCGATTTTTTCAGATTGATGGGAAACGGAATACCAAAATTCAGAGCATTTTTCTCGAGGATTGCCCCATACGAAAGGCATCATTTTTGCCTGATGGATCTCAGGTCATCATATCTGGGAGGAGAAAGTTCTTCTATAGCCTCGATCTAGTGAAGGCAAAAGTAGATAAAATAGGCCCTCTTGTAGGTAGAGAGGAGAAAAGCCTTGAAGTTTTTGAAGTTTCTCCTGATTCTAGCACGGTCGCATTCATAGGTAATGAAGGCTATATCCTGTTAGTGTCGACCAAAACAAAGGAGCTAATCGGGACGCTTAAGATGAATGGAACTGTTCGTTCCTTGGCGTTTGCCGACGATGGACAACAGCTACTGAGCTCTGGTGGCGACGGGCAGGTCTACCACTGGGATCTGAGAACAAGAACGTGCATCCACAAGGCTGTCGACGAAGGTTGCATCAATGGCACAGCACTTTGTACGTCTCCTAACGGAGCATTGTTTGCAGCGGGTTCTGACAGTGGGATCGTTAACATCTACAACAGACAAGAATTCTTAGGGGGCAAGAAGAAGCCATTGAAGGCCATTGAGAATCTGACCACCAAAGTAGACTTTCTCAAGTTCAATCACGATGCTCAAATATTGGCAATCTGTTCAAGGATGAAGAAAAGTAGTTTGAAGCTGATACACGTACCTTCTTTTACCATATTTTCGAACTGGCCGCCGCCGAAGAAGAACCTTCAGTACCCTTCATGCTTGGATTTCAGCCCCGAAGGAGGCTACATGGCTGTCGGAAATGCTGCTGGAAAGGTATTGTTGTATAAACTACATCATTATCAGCATGCTTAG

Protein sequence

MIGFAGAEWKMSLISQNVAVISSTEKVNGDNTVGSSSLLRKVDASDVENSGADTTRAKKRKKEHKKEDEQIVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNDFSAEEKAPALYIMDRSANNSLSVYENDVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRGGSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNENLVAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGQQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKPLKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSCLDFSPEGGYMAVGNAAGKVLLYKLHHYQHA

Homology

[Close]

BLAST of Cp4.1LG15g00490.1 vs. ExPASy Swiss-Prot
Match: Q9FMU5 (U3 small nucleolar RNA-associated protein 18 homolog OS=Arabidopsis thaliana OX=3702 GN=At5g14050 PE=1 SV=1)

HSP 1 Score: 672.9 bits (1735), Expect = 3.2e-192
Identity = 354/546 (64.84%), Postives = 425/546 (77.84%), Query Frame = 0


Query: 43  DASDVENSGA--DTTRAKKRKKEHKKEDEQIVKEQQKEMEKLENFLFGSLYSPVEFGKDE 102
           D  D E  G+  D TR K+RK E  KE +++ + +  EM+KLEN +FGSLYSPV FGK+E
Sbjct: 24  DVEDEEEIGSDDDLTRGKRRKTE--KEKQKLEESELVEMKKLENLIFGSLYSPVTFGKEE 83

Query: 103 EKNDFSAEEKAPALYIMDRSANNSLSVYENDVGLLDESSSKEEAQ-----QRKPVWVDEE 162
                  EE   AL+ +DRSA   +  YE+D    +E S +E  Q     + +  W DEE
Sbjct: 84  -------EEDGSALFHVDRSAVRQIPDYEDDGDDDEELSDEENGQVVAIRKGEAAWEDEE 143

Query: 163 EEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRGGSD 222
           E++ +V+I +V+RLRKLRKEE+E  ISGSEY++RLRA HAKLNPGT+WA+ D+Q   G  
Sbjct: 144 EKQINVDIASVNRLRKLRKEENEGLISGSEYIARLRAHHAKLNPGTDWARPDSQIVDGES 203

Query: 223 DDDDLSSDDENAVALADGYDNVDSIDDILRTNENLVAKS-GAKLLPGLLEYSRLVDANAQ 282
            DDD + D                +DDILRTNE+LV KS G KL  G LEYS+LVDANA 
Sbjct: 204 SDDDDTQD--------------GGVDDILRTNEDLVVKSRGNKLCAGRLEYSKLVDANAA 263

Query: 283 EPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDG 342
           +PSNGPI+SV FH+NAQLLL  GLDR+LRFFQIDGKRNTKIQSIFLEDCPIRKA+FLP+G
Sbjct: 264 DPSNGPINSVHFHQNAQLLLTAGLDRRLRFFQIDGKRNTKIQSIFLEDCPIRKAAFLPNG 323

Query: 343 SQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLV 402
           SQVI+SGRRKFFYS DL KAK DKIGPLVGREEKSLE FEVS DS+T+AF+GNEGYILLV
Sbjct: 324 SQVIVSGRRKFFYSFDLEKAKFDKIGPLVGREEKSLEYFEVSQDSNTIAFVGNEGYILLV 383

Query: 403 STKTKELIGTLKMNGTVRSLAFADDGQQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCING 462
           STKTKELIGTLKMNG+VRSLAF++DG+ LLSSGGDGQVY WDLRT  C++K VDEG   G
Sbjct: 384 STKTKELIGTLKMNGSVRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLYKGVDEGSTCG 443

Query: 463 TALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKPLKAIENLTTKVDFLKFNHDAQILA 522
           T+LC+S NGALFA+G+D GIVNIY + EF+GGK+KP+K ++NLT+K+DF+KFNHDAQILA
Sbjct: 444 TSLCSSLNGALFASGTDRGIVNIYKKSEFVGGKRKPIKTVDNLTSKIDFMKFNHDAQILA 503

Query: 523 ICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSCLDFSPEGGYMAVGNAAGKVLLYKL 581
           I S M K+S+KL+HVPS T+FSNWPPP   + YP CLDFSP  G+MA+GNAAGKVLLYKL
Sbjct: 504 IVSTMNKNSVKLVHVPSLTVFSNWPPPNSTMHYPRCLDFSPGSGFMAMGNAAGKVLLYKL 546

[Close]

BLAST of Cp4.1LG15g00490.1 vs. ExPASy Swiss-Prot
Match: Q9Y5J1 (U3 small nucleolar RNA-associated protein 18 homolog OS=Homo sapiens OX=9606 GN=UTP18 PE=1 SV=3)

HSP 1 Score: 304.3 bits (778), Expect = 3.0e-81
Identity = 181/438 (41.32%), Postives = 256/438 (58.45%), Query Frame = 0


Query: 146 QRKPVWVDEEEEKASVNITNVSRLRK-LRKEEDEKSISGSEYVSRLRA--QHAKLNPGTE 205
           Q+KPVWVDEE+E   +     +R RK + K   E  +S      RL+   QHA +     
Sbjct: 137 QKKPVWVDEEDEDEEMVDMMNNRFRKDMMKNASESKLSKDNLKKRLKEEFQHA-MGGVPA 196

Query: 206 WAQLDAQSRGGSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNENLVAKSGAKLLPGL 265
           WA  +   R  S DD+  S +DE               DD+L+   N ++ S   L  G+
Sbjct: 197 WA--ETTKRKTSSDDE--SEEDE---------------DDLLQRTGNFISTS-TSLPRGI 256

Query: 266 LEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGKRNTKIQSIFLED 325
           L+      ANA+ P+   I SVQFH  AQ+++  GLD  +  FQ+DGK N KIQSI+LE 
Sbjct: 257 LKMKNCQHANAERPTVARISSVQFHPGAQIVMVAGLDNAVSLFQVDGKTNPKIQSIYLER 316

Query: 326 CPIRKASFLPDGSQVI-ISGRRKFFYSLDLVKAKVDKIGPLVGREEKSLEVFEVSPDSST 385
            PI KA F  +G +V+  S   K  Y  D++  K+  +  + G +EK +  FEVSPD S 
Sbjct: 317 FPIFKACFSANGEEVLATSTHSKVLYVYDMLAGKLIPVHQVRGLKEKIVRSFEVSPDGSF 376

Query: 386 VAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGQQLLSSGGDGQVYHWDLRTRT 445
           +   G  GY+ L++ KTKELIG++K+NG V +  F+ D +++ +S GDG+VY WD+ +R 
Sbjct: 377 LLINGIAGYLHLLAMKTKELIGSMKINGRVAASTFSSDSKKVYASSGDGEVYVWDVNSRK 436

Query: 446 CIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFL-GGKKKPLKAIENLTTK 505
           C+++ VDEG + G ++ TS NG   A GS+ G+VNIYN+   L     KP+KAI NL T 
Sbjct: 437 CLNRFVDEGSLYGLSIATSRNGQYVACGSNCGVVNIYNQDSCLQETNPKPIKAIMNLVTG 496

Query: 506 VDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPK-KNLQYPSCLDFSPEGGY 565
           V  L FN   +ILAI S   K +++L+H+PS T+FSN+P  K KN+ +   +DFSP  GY
Sbjct: 497 VTSLTFNPTTEILAIASEKMKEAVRLVHLPSCTVFSNFPVIKNKNISHVHTMDFSPRSGY 553

Query: 566 MAVGNAAGKVLLYKLHHY 578
            A+GN  GK L+Y+LHHY
Sbjct: 557 FALGNEKGKALMYRLHHY 553

[Close]

BLAST of Cp4.1LG15g00490.1 vs. ExPASy Swiss-Prot
Match: Q5SSI6 (U3 small nucleolar RNA-associated protein 18 homolog OS=Mus musculus OX=10090 GN=Utp18 PE=1 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.5e-77
Identity = 188/550 (34.18%), Postives = 303/550 (55.09%), Query Frame = 0


Query: 35  SSSLLRKVDASDVENSGADTTRAKKRKKEHKKEDEQIVKEQQKEMEK-LENFLFGSLYSP 94
           SS   +  +     ++G+    A++ +   ++ +   +++ +   E+ LE  +FG +   
Sbjct: 37  SSQRTQPAEPRAAPSAGSAAAAAEEEESRLRQRNRLTLEDDKPAAERCLEQLVFGDV--- 96

Query: 95  VEFGKDEEKNDFSAEEKAPALYIMDRSANNSLSVYENDVGLLDESSSKEEAQQRKPVWVD 154
                         E+   AL    RS+   L    ++  + +E+      ++++PVWVD
Sbjct: 97  --------------EDDEDALLQRLRSSRGQLHGSSDESEVENEAKDIFSQKKKQPVWVD 156

Query: 155 EEEEKASVNITNVSRLRK-LRKEEDEKSISGSEYVSRLRA--QHAKLNPGTEWAQLDAQS 214
           E++E   +   + +R RK + K   E  +S  +   RL+   QHA +    +WA+  ++ 
Sbjct: 157 EDDEDEEIVDMSNNRFRKDIMKNASESKLSKDKLQKRLKEEFQHA-MGGVPDWAEAGSKR 216

Query: 215 RGGSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNENLVAKSGAKLLPGLLEYSRLVD 274
           R  SDD+   S +DE               DD+L+   N ++ S   L  G+L+      
Sbjct: 217 RTSSDDE---SEEDE---------------DDLLQRTGNFISTS-TSLPRGILKMKNCRP 276

Query: 275 ANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASF 334
           ANA+ P+   I SVQFH  AQ+++ +G+D  +  FQ+DGK N KIQSI+LE  PI KA F
Sbjct: 277 ANAERPTTARISSVQFHPGAQVVMVSGVDNAISLFQVDGKTNPKIQSIYLEKFPIFKACF 336

Query: 335 LPDGSQVI-ISGRRKFFYSLDLVKAKVDKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEG 394
             +G +V+  S   K  Y  D++  K+  +  + G +EK+++ FEVSPD S +   G  G
Sbjct: 337 SANGEEVLATSMHSKVLYVYDMLAGKLIPVHQVRGLKEKTVKQFEVSPDGSFLLISGIAG 396

Query: 395 YILLVSTKTKELIGTLKMNGTVRSLAFADDGQQLLSSGGDGQVYHWDLRTRTCIHKAVDE 454
           +  L+S KTKELIG++K+NG + +  F+ D +++ +   +G+VY WD+ +R C+++ +DE
Sbjct: 397 FSHLLSMKTKELIGSMKINGRIAASTFSSDSKRIYTYSENGEVYVWDVNSRKCMNRFLDE 456

Query: 455 GCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFL-GGKKKPLKAIENLTTKVDFLKFNH 514
           G + G ++  S NG   A GS SG+VNIYN+   L     KP+KAI NL T V  L FN 
Sbjct: 457 GSLCGLSIAASKNGQYVACGSKSGVVNIYNQDSCLQQTNPKPIKAIMNLVTGVTSLAFNP 516

Query: 515 DAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKN-LQYPSCLDFSPEGGYMAVGNAAG 574
             +ILA+ SR  K +++L+H+PS T+FSN+P  KK+ L     +DFSP GGY A+GN  G
Sbjct: 517 TTEILAVASRKMKEAVRLVHLPSCTVFSNFPVFKKSTLSRVQTMDFSPRGGYFALGNEKG 549

Query: 575 KVLLYKLHHY 578
           + L+Y+LHHY
Sbjct: 577 RALMYRLHHY 549

[Close]

BLAST of Cp4.1LG15g00490.1 vs. ExPASy Swiss-Prot
Match: P78750 (Probable U3 small nucleolar RNA-associated protein 18 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC29A3.06 PE=2 SV=3)

HSP 1 Score: 276.2 bits (705), Expect = 8.6e-73
Identity = 175/530 (33.02%), Postives = 278/530 (52.45%), Query Frame = 0


Query: 74  EQQKEMEKLENFLFGSLYSPVEF-GKDEEKNDFSAEEKAPALYIMDRSANNSLSVYEN-- 133
           E+  E  +LEN +FG++ +   F  K+ E  D    E AP L   + +  + L   E+  
Sbjct: 2   EKDTEELELENAVFGNINNFSSFLDKENETFDVMMNE-APELSEDNDAQEDELEKLEDAE 61

Query: 134 ----DVGLLDESSSK---------------EEAQQRKP-VWVDEEEEKASVNITNVSRLR 193
               D G  D +                  EEA    P +W D ++E+  +++ + SRLR
Sbjct: 62  LFMFDTGSADGAKDSVPLDIIAGDNTVKEDEEASNEIPSIWEDSDDERLMISLQDHSRLR 121

Query: 194 KLRKEEDEKSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRGGSDDDDDLSSDDENAVAL 253
           KLR+ EDE  ++G +Y  RLR Q  ++ P  EWA+             D++ +++   AL
Sbjct: 122 KLRQYEDEDMVNGLQYARRLRTQFERVYPVPEWAK-----------KQDVTEEEDEFNAL 181

Query: 254 ADGYDNVDSIDDILRTNENLVAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNA 313
           ++      S+  + +++ + + +S   L PG +   RL DAN Q PS+  I  +  H   
Sbjct: 182 SEKSVIPKSLKSLFKSSVSYINQSSKLLAPGTINIKRLKDANFQAPSHSGIRCMSIHPYF 241

Query: 314 QLLLATGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLD 373
            LLL  G DR LR +Q+DGK N  + S+ L    ++ A F PDG +VI +GRRK+ Y  D
Sbjct: 242 PLLLTCGFDRTLRIYQLDGKVNPLVTSLHLRSSALQTALFHPDGKRVIAAGRRKYMYIWD 301

Query: 374 LVKAKVDKIGPLVGRE--EKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMN 433
           L  A+V K+  + G+E  + S+E F V P    +A  G  G+I L+   T +   + K+ 
Sbjct: 302 LESAQVQKVSRMYGQENFQPSMERFHVDPTGKYIALEGRSGHINLLHALTGQFATSFKIE 361

Query: 434 GTVRSLAFADDGQQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAA 493
           G +  + F  DG ++L      +V+H+++  R+ + +   +  ++ T  C  P+    A 
Sbjct: 362 GVLSDVLFTSDGSEMLVLSYGAEVWHFNVEQRSVVRRWQVQDGVSTTHFCLDPSNKYLAI 421

Query: 494 GSDSGIVNIYNRQ-EFLGGKKKPLKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLI 553
           GS SGIVNIY+ Q        KP+  ++N+T  ++ + F+ D+Q+LAI SR KK +L+L+
Sbjct: 422 GSKSGIVNIYDLQTSNADAAPKPVTTLDNITFSINSMSFSQDSQVLAIASRGKKDTLRLV 481

Query: 554 HVPSFTIFSNWPPPKKNLQYPSCLDFSPEGGYMAVGNAAGKVLLYKLHHY 578
           HVPSF++F NWP     L   +CL F  +GG + VGN AG+V L+KL HY
Sbjct: 482 HVPSFSVFRNWPTSATPLGRVTCLAFG-KGGELCVGNEAGRVGLWKLAHY 518

[Close]

BLAST of Cp4.1LG15g00490.1 vs. ExPASy Swiss-Prot
Match: P40362 (U3 small nucleolar RNA-associated protein 18 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UTP18 PE=1 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 9.6e-56
Identity = 184/561 (32.80%), Postives = 281/561 (50.09%), Query Frame = 0


Query: 84  NFLFGSLYSPVEFGKDE-EKNDFSAEEKA----------PALYIMDRSAN-NSLSVYEN- 143
           +F+F      VE  +DE  ++D S E++A            L+ +D   N +S    E+ 
Sbjct: 43  DFIFNEQEMDVEDQEDEGSESDNSEEDEAQNGELDHVNNDQLFFVDDGGNEDSQDKNEDT 102

Query: 144 -DVGLLDESSSKEEAQ-QRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVS 203
            DV   D+SSS + ++   +  W+D ++EK  V I   ++ +KLR   +E  I+G  Y++
Sbjct: 103 MDVDDEDDSSSDDYSEDSEEAAWIDSDDEKIKVPILVTNKTKKLRTSYNESKINGVHYIN 162

Query: 204 RLRAQHAKLNPGTEWAQLDAQSRGGSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNE 263
           RLR+Q  K+ P  +W  +D +S    DD++D   +  N V   D    ++++  IL T  
Sbjct: 163 RLRSQFEKIYPRPKW--VDDESDSELDDEEDDEEEGSNNVINGD----INALTKILSTTY 222

Query: 264 NLV-AKSGAKLL-PGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQ 323
           N     S +KLL P  L+  RL DANA  PS+  I S+ FH +  LLL  G D+ LR + 
Sbjct: 223 NYKDTLSNSKLLPPKKLDIVRLKDANASHPSHSAIQSLSFHPSKPLLLTGGYDKTLRIYH 282

Query: 324 IDGKRNTKIQSIFLEDCPIRKASFLPDGS-----QVIISGRRKFFYSLDL--------VK 383
           IDGK N  + S+ L   PI+  +F    S      +  +GRR++ +S DL          
Sbjct: 283 IDGKTNHLVTSLHLVGSPIQTCTFYTSLSNQNQQNIFTAGRRRYMHSWDLSLENLTHSQT 342

Query: 384 AKVDKIGPLVGRE--EKSLEVFEVS--PDSST------VAFIGNEGYI-LLVSTKTKELI 443
           AK++K   L G E  ++S E F+V+   +S T      V   GN G+I +L ST    L+
Sbjct: 343 AKIEKFSRLYGHESTQRSFENFKVAHLQNSQTNSVHGIVLLQGNNGWINILHSTSGLWLM 402

Query: 444 GTLKMNGTVRSLAFADDGQQ---------LLSSGGDGQVYHWDL-RTRTCIHKAVDEG-- 503
           G  K+ G +    F  D Q          L++    G+V+ +DL +    I +  D+G  
Sbjct: 403 G-CKIEGVITD--FCIDYQPISRGKFRTILIAVNAYGEVWEFDLNKNGHVIRRWKDQGGV 462

Query: 504 -----CINGTALCTSP--------NGALFAAGSDSGIVNIYNRQEFL-GGKKKPLKAIEN 563
                 + G    T P             A GS+SG VN+Y+R   +      P+ A++ 
Sbjct: 463 GITKIQVGGGTTTTCPALQISKIKQNRWLAVGSESGFVNLYDRNNAMTSSTPTPVAALDQ 522

Query: 564 LTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSCLDFSPE 578
           LTT +  L+F+ D QIL + SR  K +L+L+H+PS ++FSNWP     L   + + FSP 
Sbjct: 523 LTTTISNLQFSPDGQILCMASRAVKDALRLVHLPSCSVFSNWPTSGTPLGKVTSVAFSPS 582

[Close]

BLAST of Cp4.1LG15g00490.1 vs. NCBI nr
Match: XP_023511721.1 (U3 small nucleolar RNA-associated protein 18 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1098 bits (2839), Expect = 0.0
Identity = 570/570 (100.00%), Postives = 570/570 (100.00%), Query Frame = 0


Query: 11  MSLISQNVAVISSTEKVNGDNTVGSSSLLRKVDASDVENSGADTTRAKKRKKEHKKEDEQ 70
           MSLISQNVAVISSTEKVNGDNTVGSSSLLRKVDASDVENSGADTTRAKKRKKEHKKEDEQ
Sbjct: 1   MSLISQNVAVISSTEKVNGDNTVGSSSLLRKVDASDVENSGADTTRAKKRKKEHKKEDEQ 60

Query: 71  IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNDFSAEEKAPALYIMDRSANNSLSVYEN 130
           IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNDFSAEEKAPALYIMDRSANNSLSVYEN
Sbjct: 61  IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNDFSAEEKAPALYIMDRSANNSLSVYEN 120

Query: 131 DVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL 190
           DVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL
Sbjct: 121 DVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL 180

Query: 191 RAQHAKLNPGTEWAQLDAQSRGGSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNENL 250
           RAQHAKLNPGTEWAQLDAQSRGGSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNENL
Sbjct: 181 RAQHAKLNPGTEWAQLDAQSRGGSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNENL 240

Query: 251 VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK 310
           VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK
Sbjct: 241 VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK 300

Query: 311 RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 370
           RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL
Sbjct: 301 RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 360

Query: 371 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGQQLLSSGGDG 430
           EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGQQLLSSGGDG
Sbjct: 361 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGQQLLSSGGDG 420

Query: 431 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 490
           QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP
Sbjct: 421 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 480

Query: 491 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC 550
           LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC
Sbjct: 481 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC 540

Query: 551 LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 580
           LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA
Sbjct: 541 LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 570

[Close]

BLAST of Cp4.1LG15g00490.1 vs. NCBI nr
Match: XP_022967509.1 (U3 small nucleolar RNA-associated protein 18 homolog [Cucurbita maxima])

HSP 1 Score: 1089 bits (2817), Expect = 0.0
Identity = 565/570 (99.12%), Postives = 567/570 (99.47%), Query Frame = 0


Query: 11  MSLISQNVAVISSTEKVNGDNTVGSSSLLRKVDASDVENSGADTTRAKKRKKEHKKEDEQ 70
           MSLISQNVAVISSTE VNGDNTVGSSSLLRKVDASDVENSG DTTR+KKRKKEHKKEDEQ
Sbjct: 1   MSLISQNVAVISSTENVNGDNTVGSSSLLRKVDASDVENSGVDTTRSKKRKKEHKKEDEQ 60

Query: 71  IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNDFSAEEKAPALYIMDRSANNSLSVYEN 130
           IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNDFSAEEKAPALYIMDRSANNSLSVYEN
Sbjct: 61  IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNDFSAEEKAPALYIMDRSANNSLSVYEN 120

Query: 131 DVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL 190
           DVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL
Sbjct: 121 DVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL 180

Query: 191 RAQHAKLNPGTEWAQLDAQSRGGSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNENL 250
           RAQHAKLNPGTEWAQLDAQSR GSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNENL
Sbjct: 181 RAQHAKLNPGTEWAQLDAQSRSGSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNENL 240

Query: 251 VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK 310
           VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK
Sbjct: 241 VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK 300

Query: 311 RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 370
           RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL
Sbjct: 301 RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 360

Query: 371 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGQQLLSSGGDG 430
           EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDG+QLLSSGGDG
Sbjct: 361 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDG 420

Query: 431 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 490
           QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP
Sbjct: 421 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 480

Query: 491 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC 550
           LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC
Sbjct: 481 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC 540

Query: 551 LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 580
           LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA
Sbjct: 541 LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 570

[Close]

BLAST of Cp4.1LG15g00490.1 vs. NCBI nr
Match: KAG7011246.1 (U3 small nucleolar RNA-associated protein 18-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1077 bits (2785), Expect = 0.0
Identity = 560/575 (97.39%), Postives = 565/575 (98.26%), Query Frame = 0


Query: 6   GAEWKMSLISQNVAVISSTEKVNGDNTVGSSSLLRKVDASDVENSGADTTRAKKRKKEHK 65
           GAEWKMSLISQNVAVISS EKV  DNTV SSS LRKVDASDVENSG DTTRAKKRKKEHK
Sbjct: 123 GAEWKMSLISQNVAVISSIEKVTEDNTVVSSSPLRKVDASDVENSGVDTTRAKKRKKEHK 182

Query: 66  KEDEQIVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNDFSAEEKAPALYIMDRSANNSL 125
           KEDEQIVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKN FSAEEK  ALYIMDRSANNSL
Sbjct: 183 KEDEQIVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNGFSAEEKDSALYIMDRSANNSL 242

Query: 126 SVYENDVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSE 185
           SVYENDVGLLDESS KEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSE
Sbjct: 243 SVYENDVGLLDESSIKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSE 302

Query: 186 YVSRLRAQHAKLNPGTEWAQLDAQSRGGSDDDDDLSSDDENAVALADGYDNVDSIDDILR 245
           YVSRLRAQHAKLNPGTEWAQLDAQSRGGSDDDDDL+SDDENAVALADGYDNVDSIDDILR
Sbjct: 303 YVSRLRAQHAKLNPGTEWAQLDAQSRGGSDDDDDLTSDDENAVALADGYDNVDSIDDILR 362

Query: 246 TNENLVAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFF 305
           TNENLVAKSGAKLLPGLLEYSRLVDANAQEP+NGPIHSVQFHRNAQLLLATGLDRKLRFF
Sbjct: 363 TNENLVAKSGAKLLPGLLEYSRLVDANAQEPANGPIHSVQFHRNAQLLLATGLDRKLRFF 422

Query: 306 QIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGR 365
           QIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRR+FFYSLDLVKAKVDKIGPLVGR
Sbjct: 423 QIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRRFFYSLDLVKAKVDKIGPLVGR 482

Query: 366 EEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGQQLLS 425
           EEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFAD+G+QLLS
Sbjct: 483 EEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADNGRQLLS 542

Query: 426 SGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLG 485
           SGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLG
Sbjct: 543 SGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLG 602

Query: 486 GKKKPLKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNL 545
           GKKKPLKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNL
Sbjct: 603 GKKKPLKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNL 662

Query: 546 QYPSCLDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 580
           QYPSCLDFSPEGGYMAVGNAAGKVLLYKLHHYQHA
Sbjct: 663 QYPSCLDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 697

[Close]

BLAST of Cp4.1LG15g00490.1 vs. NCBI nr
Match: XP_022963504.1 (U3 small nucleolar RNA-associated protein 18 homolog [Cucurbita moschata])

HSP 1 Score: 1070 bits (2768), Expect = 0.0
Identity = 558/570 (97.89%), Postives = 561/570 (98.42%), Query Frame = 0


Query: 11  MSLISQNVAVISSTEKVNGDNTVGSSSLLRKVDASDVENSGADTTRAKKRKKEHKKEDEQ 70
           MSLISQNVAVISS EKV  DNTV SSS LRKVDASDVENSG DTTRAKKRKKEHKKEDEQ
Sbjct: 1   MSLISQNVAVISSIEKVTEDNTVVSSSPLRKVDASDVENSGVDTTRAKKRKKEHKKEDEQ 60

Query: 71  IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNDFSAEEKAPALYIMDRSANNSLSVYEN 130
           IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKN FSAEEK  ALYIMDRSANNSLSVYEN
Sbjct: 61  IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNGFSAEEKDSALYIMDRSANNSLSVYEN 120

Query: 131 DVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL 190
           DVGLLDESS+KEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL
Sbjct: 121 DVGLLDESSNKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL 180

Query: 191 RAQHAKLNPGTEWAQLDAQSRGGSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNENL 250
           RAQHAKLNPGTEWAQLDAQSRGGSDDDDDL+SDDENAVALADGYDNVDSIDDILRTNENL
Sbjct: 181 RAQHAKLNPGTEWAQLDAQSRGGSDDDDDLTSDDENAVALADGYDNVDSIDDILRTNENL 240

Query: 251 VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK 310
           VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK
Sbjct: 241 VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK 300

Query: 311 RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 370
           RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL
Sbjct: 301 RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 360

Query: 371 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGQQLLSSGGDG 430
           EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDG+QLLSSGGDG
Sbjct: 361 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDG 420

Query: 431 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 490
           QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP
Sbjct: 421 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 480

Query: 491 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC 550
           LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC
Sbjct: 481 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC 540

Query: 551 LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 580
           LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA
Sbjct: 541 LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 570

[Close]

BLAST of Cp4.1LG15g00490.1 vs. NCBI nr
Match: KAG6571483.1 (U3 small nucleolar RNA-associated protein 18-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1055 bits (2729), Expect = 0.0
Identity = 550/564 (97.52%), Postives = 555/564 (98.40%), Query Frame = 0


Query: 6   GAEWKMSLISQNVAVISSTEKVNGDNTVGSSSLLRKVDASDVENSGADTTRAKKRKKEHK 65
           GAEWKMSLISQNVAVISS EKV  DNTV SSS LRKVDASDVENSG DTTRAKKRKKEHK
Sbjct: 191 GAEWKMSLISQNVAVISSIEKVIEDNTVVSSSPLRKVDASDVENSGVDTTRAKKRKKEHK 250

Query: 66  KEDEQIVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNDFSAEEKAPALYIMDRSANNSL 125
           KEDEQIVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKN FSAEEK  ALYIMDRSANNSL
Sbjct: 251 KEDEQIVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNGFSAEEKDSALYIMDRSANNSL 310

Query: 126 SVYENDVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSE 185
           SVYENDVGLLDESS+KEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSE
Sbjct: 311 SVYENDVGLLDESSNKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSE 370

Query: 186 YVSRLRAQHAKLNPGTEWAQLDAQSRGGSDDDDDLSSDDENAVALADGYDNVDSIDDILR 245
           YVSRLRAQHAKLNPGTEWAQLDAQSRGGSDDDDDL+SDDENAVALADGYDNVDSIDDILR
Sbjct: 371 YVSRLRAQHAKLNPGTEWAQLDAQSRGGSDDDDDLTSDDENAVALADGYDNVDSIDDILR 430

Query: 246 TNENLVAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFF 305
           TNENLVAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFF
Sbjct: 431 TNENLVAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFF 490

Query: 306 QIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGR 365
           QIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRR+FFYSLDLVKAKVDKIGPLVGR
Sbjct: 491 QIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRRFFYSLDLVKAKVDKIGPLVGR 550

Query: 366 EEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGQQLLS 425
           EEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFAD+G+QLLS
Sbjct: 551 EEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADNGRQLLS 610

Query: 426 SGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLG 485
           SGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLG
Sbjct: 611 SGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLG 670

Query: 486 GKKKPLKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNL 545
           GKKKPLKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNL
Sbjct: 671 GKKKPLKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNL 730

Query: 546 QYPSCLDFSPEGGYMAVGNAAGKV 569
           QYPSCLDFSPEGGYMAVGNAAGKV
Sbjct: 731 QYPSCLDFSPEGGYMAVGNAAGKV 754

[Close]

BLAST of Cp4.1LG15g00490.1 vs. ExPASy TrEMBL
Match: A0A6J1HWX2 (U3 small nucleolar RNA-associated protein 18 homolog OS=Cucurbita maxima OX=3661 GN=LOC111466993 PE=4 SV=1)

HSP 1 Score: 1089 bits (2817), Expect = 0.0
Identity = 565/570 (99.12%), Postives = 567/570 (99.47%), Query Frame = 0


Query: 11  MSLISQNVAVISSTEKVNGDNTVGSSSLLRKVDASDVENSGADTTRAKKRKKEHKKEDEQ 70
           MSLISQNVAVISSTE VNGDNTVGSSSLLRKVDASDVENSG DTTR+KKRKKEHKKEDEQ
Sbjct: 1   MSLISQNVAVISSTENVNGDNTVGSSSLLRKVDASDVENSGVDTTRSKKRKKEHKKEDEQ 60

Query: 71  IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNDFSAEEKAPALYIMDRSANNSLSVYEN 130
           IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNDFSAEEKAPALYIMDRSANNSLSVYEN
Sbjct: 61  IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNDFSAEEKAPALYIMDRSANNSLSVYEN 120

Query: 131 DVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL 190
           DVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL
Sbjct: 121 DVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL 180

Query: 191 RAQHAKLNPGTEWAQLDAQSRGGSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNENL 250
           RAQHAKLNPGTEWAQLDAQSR GSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNENL
Sbjct: 181 RAQHAKLNPGTEWAQLDAQSRSGSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNENL 240

Query: 251 VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK 310
           VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK
Sbjct: 241 VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK 300

Query: 311 RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 370
           RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL
Sbjct: 301 RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 360

Query: 371 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGQQLLSSGGDG 430
           EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDG+QLLSSGGDG
Sbjct: 361 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDG 420

Query: 431 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 490
           QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP
Sbjct: 421 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 480

Query: 491 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC 550
           LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC
Sbjct: 481 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC 540

Query: 551 LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 580
           LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA
Sbjct: 541 LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 570

[Close]

BLAST of Cp4.1LG15g00490.1 vs. ExPASy TrEMBL
Match: A0A6J1HKC7 (U3 small nucleolar RNA-associated protein 18 homolog OS=Cucurbita moschata OX=3662 GN=LOC111463814 PE=4 SV=1)

HSP 1 Score: 1070 bits (2768), Expect = 0.0
Identity = 558/570 (97.89%), Postives = 561/570 (98.42%), Query Frame = 0


Query: 11  MSLISQNVAVISSTEKVNGDNTVGSSSLLRKVDASDVENSGADTTRAKKRKKEHKKEDEQ 70
           MSLISQNVAVISS EKV  DNTV SSS LRKVDASDVENSG DTTRAKKRKKEHKKEDEQ
Sbjct: 1   MSLISQNVAVISSIEKVTEDNTVVSSSPLRKVDASDVENSGVDTTRAKKRKKEHKKEDEQ 60

Query: 71  IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNDFSAEEKAPALYIMDRSANNSLSVYEN 130
           IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKN FSAEEK  ALYIMDRSANNSLSVYEN
Sbjct: 61  IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNGFSAEEKDSALYIMDRSANNSLSVYEN 120

Query: 131 DVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL 190
           DVGLLDESS+KEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL
Sbjct: 121 DVGLLDESSNKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL 180

Query: 191 RAQHAKLNPGTEWAQLDAQSRGGSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNENL 250
           RAQHAKLNPGTEWAQLDAQSRGGSDDDDDL+SDDENAVALADGYDNVDSIDDILRTNENL
Sbjct: 181 RAQHAKLNPGTEWAQLDAQSRGGSDDDDDLTSDDENAVALADGYDNVDSIDDILRTNENL 240

Query: 251 VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK 310
           VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK
Sbjct: 241 VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK 300

Query: 311 RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 370
           RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL
Sbjct: 301 RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 360

Query: 371 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGQQLLSSGGDG 430
           EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDG+QLLSSGGDG
Sbjct: 361 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDG 420

Query: 431 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 490
           QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP
Sbjct: 421 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 480

Query: 491 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC 550
           LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC
Sbjct: 481 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC 540

Query: 551 LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 580
           LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA
Sbjct: 541 LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 570

[Close]

BLAST of Cp4.1LG15g00490.1 vs. ExPASy TrEMBL
Match: A0A1S3C7I9 (U3 small nucleolar RNA-associated protein 18 homolog OS=Cucumis melo OX=3656 GN=LOC103497366 PE=4 SV=1)

HSP 1 Score: 992 bits (2565), Expect = 0.0
Identity = 512/570 (89.82%), Postives = 541/570 (94.91%), Query Frame = 0


Query: 11  MSLISQNVAVISSTEKVNGDNTVGSSSLLRKVDASDVENSGADTTRAKKRKKEHKKEDEQ 70
           MSLISQNVAVISS EK   +NT+G SS LR  DAS+V+ SG DT+RAKKRKKEH+KEDEQ
Sbjct: 1   MSLISQNVAVISSIEKGTEENTLGPSSPLRNADASEVDKSGLDTSRAKKRKKEHRKEDEQ 60

Query: 71  IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNDFSAEEKAPALYIMDRSANNSLSVYEN 130
           +V+EQQKEM KLENFLFGSLYSPVEFGKDEE+N F++EEK PALYIMDRSA+NSLS YE+
Sbjct: 61  LVQEQQKEMMKLENFLFGSLYSPVEFGKDEEQNGFNSEEKIPALYIMDRSADNSLSAYED 120

Query: 131 DVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL 190
           D  +LDES++KEE QQRKPVWVDEEEEKA+VNITNVSRLRKLRKEEDE SISGS YVSRL
Sbjct: 121 DYRVLDESTNKEEHQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEDENSISGSVYVSRL 180

Query: 191 RAQHAKLNPGTEWAQLDAQSRGGSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNENL 250
           RAQHAKLNPGTEWAQLDAQSRG SDDDD + SDDENAVALA GYDNVDSIDDILRT+ENL
Sbjct: 181 RAQHAKLNPGTEWAQLDAQSRGDSDDDD-ILSDDENAVALAGGYDNVDSIDDILRTSENL 240

Query: 251 VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK 310
           V KSG KL+PGLL YSRLVDANA+EPSNGPI+SVQFHRN+QLLLATGLDRKLRFFQIDGK
Sbjct: 241 VVKSGGKLMPGLLGYSRLVDANAEEPSNGPINSVQFHRNSQLLLATGLDRKLRFFQIDGK 300

Query: 311 RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 370
           RNTKIQSIFLEDCPIRKASFLPDGSQVII+GRRKFFYSLDLVKAKVDKIGPLVGREEKSL
Sbjct: 301 RNTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 360

Query: 371 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGQQLLSSGGDG 430
           E FEVSPDSST+AFIGNEGYILLVS KTKELIGTLKMNG+VRSLAFADDG+QLLSSGGDG
Sbjct: 361 EAFEVSPDSSTIAFIGNEGYILLVSIKTKELIGTLKMNGSVRSLAFADDGRQLLSSGGDG 420

Query: 431 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 490
           Q+YHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP
Sbjct: 421 QIYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 480

Query: 491 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC 550
           LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIH+PSFTIFSNWPPPKKNLQYPSC
Sbjct: 481 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHIPSFTIFSNWPPPKKNLQYPSC 540

Query: 551 LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 580
           LDFSPEGGYMAVGNAAGKVLLYKLHHY HA
Sbjct: 541 LDFSPEGGYMAVGNAAGKVLLYKLHHYHHA 569

[Close]

BLAST of Cp4.1LG15g00490.1 vs. ExPASy TrEMBL
Match: A0A6J1ET16 (U3 small nucleolar RNA-associated protein 18 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437464 PE=4 SV=1)

HSP 1 Score: 986 bits (2550), Expect = 0.0
Identity = 513/571 (89.84%), Postives = 538/571 (94.22%), Query Frame = 0


Query: 11  MSLISQNVAVISSTEKVNGDNTVGSSSLLRKVDASDVENSGADTTRAKKRKKEHKKEDEQ 70
           MSLISQ+VA IS+ EKV G+  VGSSS LR +DASDVE SGADTTR KKRKKEHKKED Q
Sbjct: 1   MSLISQSVAAISNLEKVTGETIVGSSSPLRNLDASDVEMSGADTTRPKKRKKEHKKEDAQ 60

Query: 71  IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNDFSAEEK-APALYIMDRSANNSLSVYE 130
           +VKEQQ+EM+ LENFLFGSLYSPVEFGK EE N  S EEK APALYIMDRSAN+SLS YE
Sbjct: 61  LVKEQQQEMKNLENFLFGSLYSPVEFGKHEEVNGLSGEEKEAPALYIMDRSANSSLSAYE 120

Query: 131 NDVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSR 190
            D GLLDES ++EE QQRKPVW+DEEEEKA+VNITNVSRLRKLRKEEDEKSISGSEYVSR
Sbjct: 121 GDFGLLDESVNEEEPQQRKPVWIDEEEEKATVNITNVSRLRKLRKEEDEKSISGSEYVSR 180

Query: 191 LRAQHAKLNPGTEWAQLDAQSRGGSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNEN 250
           LRAQHAKLNP TEWAQLD Q+RGGSDDDD LSSDDENAV +ADGYD+VDSIDDILRT++N
Sbjct: 181 LRAQHAKLNPSTEWAQLDVQTRGGSDDDD-LSSDDENAVVMADGYDDVDSIDDILRTSDN 240

Query: 251 LVAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDG 310
           LV KSG KLLPGLLEYSRLVDANA+EPSNGPIHSVQFHRNAQLLLATGLDR+LRFFQIDG
Sbjct: 241 LVEKSGGKLLPGLLEYSRLVDANAEEPSNGPIHSVQFHRNAQLLLATGLDRRLRFFQIDG 300

Query: 311 KRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKS 370
           KRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRR+FFYS DLVKAKVDKIGPLVGREEKS
Sbjct: 301 KRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRRFFYSFDLVKAKVDKIGPLVGREEKS 360

Query: 371 LEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGQQLLSSGGD 430
           LEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAF D+G+QLLSSGGD
Sbjct: 361 LEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFTDNGRQLLSSGGD 420

Query: 431 GQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKK 490
           GQVYHWDLRTRTCIHK VDEGCINGTAL TSPNGALFAAGSDSGIVNIYNR+EFLGGKKK
Sbjct: 421 GQVYHWDLRTRTCIHKGVDEGCINGTALGTSPNGALFAAGSDSGIVNIYNREEFLGGKKK 480

Query: 491 PLKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPS 550
           PLKAIENLTTKV+FLKFNHDAQILAICSRMKKSSLKLIHVPSFT FSNWPPPKKNLQYPS
Sbjct: 481 PLKAIENLTTKVEFLKFNHDAQILAICSRMKKSSLKLIHVPSFTTFSNWPPPKKNLQYPS 540

Query: 551 CLDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 580
           CLDFSPEGGYMAVGNAAGKVLLYKLHHY+HA
Sbjct: 541 CLDFSPEGGYMAVGNAAGKVLLYKLHHYRHA 570

[Close]

BLAST of Cp4.1LG15g00490.1 vs. ExPASy TrEMBL
Match: A0A6J1K5W3 (U3 small nucleolar RNA-associated protein 18 homolog OS=Cucurbita maxima OX=3661 GN=LOC111490998 PE=4 SV=1)

HSP 1 Score: 981 bits (2535), Expect = 0.0
Identity = 511/571 (89.49%), Postives = 536/571 (93.87%), Query Frame = 0


Query: 11  MSLISQNVAVISSTEKVNGDNTVGSSSLLRKVDASDVENSGADTTRAKKRKKEHKKEDEQ 70
           MSLISQNVA ISS EKV G+  V SSS LR +DASDVE SGADTTR KKRKKEHKKED Q
Sbjct: 1   MSLISQNVAAISSLEKVTGETIVASSSPLRNLDASDVEISGADTTRPKKRKKEHKKEDAQ 60

Query: 71  IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNDFSAEEK-APALYIMDRSANNSLSVYE 130
           +VKEQQ++M+KLENFLFGSLYSP EFGK EE N  S EEK APALYIMDRSAN+SLS YE
Sbjct: 61  LVKEQQQKMKKLENFLFGSLYSPAEFGKHEEVNGLSGEEKEAPALYIMDRSANSSLSAYE 120

Query: 131 NDVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSR 190
            D GLLDES ++EE QQRKPVW+DEEEEKA+VNITNVSRLRKLRKEEDEKSISGSEYVSR
Sbjct: 121 GDFGLLDESVNEEEPQQRKPVWIDEEEEKATVNITNVSRLRKLRKEEDEKSISGSEYVSR 180

Query: 191 LRAQHAKLNPGTEWAQLDAQSRGGSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNEN 250
           LRAQHAKLNP TEWAQLD Q+ GGSDDDD LSSDDENAV +ADG+D+VDSIDDILRT++N
Sbjct: 181 LRAQHAKLNPSTEWAQLDVQTSGGSDDDD-LSSDDENAVVMADGHDDVDSIDDILRTSDN 240

Query: 251 LVAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDG 310
           LV KSG KLLPGLLEYSRLVDANA+EPSNGPIHSVQFHRNAQLLLATGLDR+LRFFQIDG
Sbjct: 241 LVEKSGGKLLPGLLEYSRLVDANAEEPSNGPIHSVQFHRNAQLLLATGLDRRLRFFQIDG 300

Query: 311 KRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKS 370
           KRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRR+FFYSLDLVKAKVDKIGPLVGREEKS
Sbjct: 301 KRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRRFFYSLDLVKAKVDKIGPLVGREEKS 360

Query: 371 LEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGQQLLSSGGD 430
           LEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAF D+G QLLSSGGD
Sbjct: 361 LEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFTDNGFQLLSSGGD 420

Query: 431 GQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKK 490
           GQVYHWDLRTRTCIHK VDEGCINGTAL TSPNGALFAAGSDSGIVNIYNR+EFLGGKKK
Sbjct: 421 GQVYHWDLRTRTCIHKGVDEGCINGTALGTSPNGALFAAGSDSGIVNIYNREEFLGGKKK 480

Query: 491 PLKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPS 550
           P+KAIENLTTKV+FLKFNHDAQILAICSRMKKSSLKLIHVPSFT FSNWPPPKKNLQYPS
Sbjct: 481 PMKAIENLTTKVEFLKFNHDAQILAICSRMKKSSLKLIHVPSFTTFSNWPPPKKNLQYPS 540

Query: 551 CLDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 580
           CLDFSPEGGYMAVGNAAGKVLLYKLHHY+HA
Sbjct: 541 CLDFSPEGGYMAVGNAAGKVLLYKLHHYRHA 570

[Close]

BLAST of Cp4.1LG15g00490.1 vs. TAIR 10
Match: AT5G14050.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 672.9 bits (1735), Expect = 2.3e-193
Identity = 354/546 (64.84%), Postives = 425/546 (77.84%), Query Frame = 0


Query: 43  DASDVENSGA--DTTRAKKRKKEHKKEDEQIVKEQQKEMEKLENFLFGSLYSPVEFGKDE 102
           D  D E  G+  D TR K+RK E  KE +++ + +  EM+KLEN +FGSLYSPV FGK+E
Sbjct: 24  DVEDEEEIGSDDDLTRGKRRKTE--KEKQKLEESELVEMKKLENLIFGSLYSPVTFGKEE 83

Query: 103 EKNDFSAEEKAPALYIMDRSANNSLSVYENDVGLLDESSSKEEAQ-----QRKPVWVDEE 162
                  EE   AL+ +DRSA   +  YE+D    +E S +E  Q     + +  W DEE
Sbjct: 84  -------EEDGSALFHVDRSAVRQIPDYEDDGDDDEELSDEENGQVVAIRKGEAAWEDEE 143

Query: 163 EEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRGGSD 222
           E++ +V+I +V+RLRKLRKEE+E  ISGSEY++RLRA HAKLNPGT+WA+ D+Q   G  
Sbjct: 144 EKQINVDIASVNRLRKLRKEENEGLISGSEYIARLRAHHAKLNPGTDWARPDSQIVDGES 203

Query: 223 DDDDLSSDDENAVALADGYDNVDSIDDILRTNENLVAKS-GAKLLPGLLEYSRLVDANAQ 282
            DDD + D                +DDILRTNE+LV KS G KL  G LEYS+LVDANA 
Sbjct: 204 SDDDDTQD--------------GGVDDILRTNEDLVVKSRGNKLCAGRLEYSKLVDANAA 263

Query: 283 EPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDG 342
           +PSNGPI+SV FH+NAQLLL  GLDR+LRFFQIDGKRNTKIQSIFLEDCPIRKA+FLP+G
Sbjct: 264 DPSNGPINSVHFHQNAQLLLTAGLDRRLRFFQIDGKRNTKIQSIFLEDCPIRKAAFLPNG 323

Query: 343 SQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLV 402
           SQVI+SGRRKFFYS DL KAK DKIGPLVGREEKSLE FEVS DS+T+AF+GNEGYILLV
Sbjct: 324 SQVIVSGRRKFFYSFDLEKAKFDKIGPLVGREEKSLEYFEVSQDSNTIAFVGNEGYILLV 383

Query: 403 STKTKELIGTLKMNGTVRSLAFADDGQQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCING 462
           STKTKELIGTLKMNG+VRSLAF++DG+ LLSSGGDGQVY WDLRT  C++K VDEG   G
Sbjct: 384 STKTKELIGTLKMNGSVRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLYKGVDEGSTCG 443

Query: 463 TALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKPLKAIENLTTKVDFLKFNHDAQILA 522
           T+LC+S NGALFA+G+D GIVNIY + EF+GGK+KP+K ++NLT+K+DF+KFNHDAQILA
Sbjct: 444 TSLCSSLNGALFASGTDRGIVNIYKKSEFVGGKRKPIKTVDNLTSKIDFMKFNHDAQILA 503

Query: 523 ICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSCLDFSPEGGYMAVGNAAGKVLLYKL 581
           I S M K+S+KL+HVPS T+FSNWPPP   + YP CLDFSP  G+MA+GNAAGKVLLYKL
Sbjct: 504 IVSTMNKNSVKLVHVPSLTVFSNWPPPNSTMHYPRCLDFSPGSGFMAMGNAAGKVLLYKL 546

The following BLAST results are available for this feature:

BLAST of Cp4.1LG15g00490.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMU5	3.2e-192	64.84	U3 small nucleolar RNA-associated protein 18 homolog OS=Arabidopsis thaliana OX=...	[more]
Q9Y5J1	3.0e-81	41.32	U3 small nucleolar RNA-associated protein 18 homolog OS=Homo sapiens OX=9606 GN=...	[more]
Q5SSI6	1.5e-77	34.18	U3 small nucleolar RNA-associated protein 18 homolog OS=Mus musculus OX=10090 GN...	[more]
P78750	8.6e-73	33.02	Probable U3 small nucleolar RNA-associated protein 18 OS=Schizosaccharomyces pom...	[more]
P40362	9.6e-56	32.80	U3 small nucleolar RNA-associated protein 18 OS=Saccharomyces cerevisiae (strain...	[more]

BLAST of Cp4.1LG15g00490.1 vs. NCBI nr


Match Name	Identity	Description
XP_023511721.1	100.00	U3 small nucleolar RNA-associated protein 18 homolog [Cucurbita pepo subsp. pepo...	[more]
XP_022967509.1	99.12	U3 small nucleolar RNA-associated protein 18 homolog [Cucurbita maxima]	[more]
KAG7011246.1	97.39	U3 small nucleolar RNA-associated protein 18-like protein, partial [Cucurbita ar...	[more]
XP_022963504.1	97.89	U3 small nucleolar RNA-associated protein 18 homolog [Cucurbita moschata]	[more]
KAG6571483.1	97.52	U3 small nucleolar RNA-associated protein 18-like protein, partial [Cucurbita ar...	[more]

BLAST of Cp4.1LG15g00490.1 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1HWX2	99.12	U3 small nucleolar RNA-associated protein 18 homolog OS=Cucurbita maxima OX=3661...	[more]
A0A6J1HKC7	97.89	U3 small nucleolar RNA-associated protein 18 homolog OS=Cucurbita moschata OX=36...	[more]
A0A1S3C7I9	89.82	U3 small nucleolar RNA-associated protein 18 homolog OS=Cucumis melo OX=3656 GN=...	[more]
A0A6J1ET16	89.84	U3 small nucleolar RNA-associated protein 18 homolog isoform X1 OS=Cucurbita mos...	[more]
A0A6J1K5W3	89.49	U3 small nucleolar RNA-associated protein 18 homolog OS=Cucurbita maxima OX=3661...	[more]

BLAST of Cp4.1LG15g00490.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14050.1	2.3e-193	64.84	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 58..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..224
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..70
None	No IPR available	PANTHER	PTHR18359:SF0	U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 18 HOMOLOG	coord: 52..579
None	No IPR available	PANTHER	PTHR18359	WD-REPEAT PROTEIN-RELATED	coord: 52..579
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 404..439 score: 9.045603
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 531..573 e-value: 17.0 score: 9.2 coord: 267..306 e-value: 4.7 score: 12.8 coord: 398..436 e-value: 1.4E-6 score: 37.8 coord: 439..479 e-value: 1.7 score: 15.5
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 402..436 e-value: 0.0061 score: 17.4 coord: 452..479 e-value: 0.032 score: 15.1
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 404..445 score: 11.611251
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 256..575 e-value: 3.6E-107 score: 360.5
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 277..574

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG15g00490	Cp4.1LG15g00490	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG15g00490.1:exon:001	Cp4.1LG15g00490.1:exon:001	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG15g00490.1:cds:001	Cp4.1LG15g00490.1:cds:001	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG15g00490.1	Cp4.1LG15g00490.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0032040	small-subunit processome
cellular_component	GO:0034388	Pwp2p-containing subcomplex of 90S preribosome
molecular_function	GO:0005515	protein binding