Cp4.1LG14g01570.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG14g01570.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Mitochondrial transcription termination factor family protein
Location	Cp4.1LG14: 3622040 .. 3628821 (+)
Sequence length	3033
RNA-Seq Expression	Cp4.1LG14g01570.1
Synteny	Cp4.1LG14g01570.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCATCGTTCTCTATTTCCTCTCGCTATAATCCTTCCTCCTTGCTCCGAATTGATCCGCTCTTGTACTGTTTCTTCTCTTCTTCTTCCCACAGCCAAGCCTCTGCTTCATATGGAATCGTCGTTCAATACCTTATTGATACCTTCGAACTCTCCCCCGCCAGAGCGGTGTCGATTATGAGGAGCCGCAGAGGCATTGAATCGACGGAAAAGCCTCAATCCGTTTACAAATATCTTTCAGAGCTCGGATTCTCCAAAGCTCACATTCAATCGACGATTCGCCTTGCGCCGCAGATCGCGTTTTCCAACATCGAAAGGACTCTGAAGCCGAAGATTGAGTTCTTCCAGAATCTTGGCTTGGTCGGCTCCGATTTGGGTAGGTTCATTTCCAAGCATTCTACGCTTTTGACTGTTAGTTTGGAGAAGAAATTGATGCCTAGTGTTGAGATTCTTCAGAGTGTTTTCCCCAAGGATGAGTGTAATAGCGATCTCCTGCAAGGTATGCAGCGATGTTGTGATAAGCTTATGCGATTTCCGTATACAAGGTTGCTTGTCAATATTAATTACTTACAAAGTTGCGGGATTGTTGGTTCTCAACTCTCTATGTTACTGAAGAGGCAACCTGCACTTTTTGGTAAGCGTGAATCTCAAGTTAGAGATATTGTTTCCATGGTTGTAGAGACTGGTTTTTCTACAAATACTAAAATGTTTGTTCATGGACTTCATGCTATCAGTAGTGTAACGAATGCGACCTTCAAGAAGAAAGTGGAATTGATTTGCAGCTTTGGAATAACTGAGAAGGAATGTATGAGAATGTTTACTTCTGCTCCTGTTTTGATAAGAACCTCCGGTGGTAAACTTAAACGTGGTCTAGAATTCTTTATGAATGAGGCAGAAGTCAGTAGATCAGATATTGTTCGTAAACCTACTTGTTTGATGCACGCCATGGAGGGGAGGGTGCTCCCTCGGTATAGAGTTCTTCAGGTCGTAAAGTCGAAGAGGCTATTGATGAAACACCCGCAATTGATTGATATATTGGGGATGTCTGATGAGGATTTCTTGGATAAATTCGTGCACAGGTTTCCTGATCATGTGACAGAATTGTTGGCTGCCTTTAGAGGTCAATGTATGGATGAATTGCAGCCTAAGGAGTTGGAAACATGAAGACATGGCCAGAACTAGAGCTTATTTGATCCAACATCTAGTTGCCCATCACGACAAAGTGTTTGTCGATCTTGATGTGCTTGGTGCACCAGATTTGAACCAAGTCATATGGTTGTTTGCTGCCAGTATGAACTTGGGTTTCTTGCAAGGGGCTTGTTCTCTGTGACAGAGCACTTCTTAAGATTTTGGTAAGTTTATCTGACAATTGANAAGACTCTGAAGCCGAAGATCGAGTTCTTCCAGAATCTTGGCTTGGTCGGCTCCGATTTGGGTAGGTTCATTTCCAAGCATTCTACGCTTTTGACTGTTAGTTTGGAGAAGAAATTGATGCCTAGTGTTGAGATTCTTCAGAGTGTTTTCCCCAAGGATGAGTGTAATAGCGATCTCCTGCAAGGTATGCAGCGATGTTGTGATAAGCTTATGCGATTTCCGTATACAAGGTTGCTTGTCAATATTAATTACTTACAAAGTTGCGGGATTGTTGGTTCTCAACTCTCTATGTTACTGAAGAGGCAACCTGCACTTTTTGGTAAGCGTGAATCTCAAGTTAGAGATATTGTTTCCATGGTTGTAGAGACTGGTTTTTCTACAAATACTAAAATGTTTGTTCATGGACTTCATGCTATCAGTAGTGTAACGAATGCGACCTTCAAGAAGAAAGTGGAATTGATTTGCAGCTTTGGAATAACTGAGAAGGAATGTATGAGAATGTTTACTTCTGCTCCTGTTTTGATAAGAACCTCCGGTGGTAAACTTAAACGTGGTCTAGAATTCTTTATGAATGAGGCAGAAGTCAGTAGATCAGATATTGTTCGTAAACCTACTTGTTTGATGCACGCCATGGAGGGGAGGGTGCTCCCTCGGTATAGAGTTCTTCAGGTCGTAAAGTCGAAGAGGCTATTGATGAAACACCCGCAATTGATTGATATATTGGGGATGTCTGATGAGGATTTCTTGGATAAATTCGTGCACAGGTTTCCTGATCATGTGACAGAATTGTTGGCTGCCTTTAGAGGTCAATGTATGGATGAATTGCAGCCTAAGGAGTTGGAAACATGAAGACATGGCCAGAACTAGAGCTTATTTGATCCAACATCTAGTTGCCCATCACGACAAAGTGTTTGTCGATCTTGATGTGCTTGGTGCACCAGATTTGAACCAAGTCATATGGTTGTTTGCTGCCAGTATGAACTTGGGTTTCTTGCAAGGGGCTTGTTCTCTGTGACAGAGCACTTCTTAAGATTTTGGTAAGTTTATCTGACAATTGAAAAATCAAATTCTTCCTAGATGTATACAATAATAATTGTGAAGCATGAACACTTTAGCTTGGATAATGTGCTTGTATTTGGGAATATTATTGAACTCGTTGATAATTATTTGAACAAATCCGACACATTCGATGGGTATGTCCTGGTTTATGTTCATGACTTGTTCTTGTTTAAGGTAGGATAGCCTCAATTACATTCTTGAACTGTCTGGCTATTAGTTCCTTGTTTGTTGCTTTGAAACTTGAACAGTCTCATCTTAGCTTTAAAATGGAGCTTAGGCCCTCATAACTTCATAGCTATCAAATTTGGACTTCCACATTCGGCTTGAGAATTTTAGTTGGTGATTTGATTATTGATTTTCTTTTGCAACCAAAGTTCATCTTGCCGCTTAGGAGAGTGCACCAGATACGTTTGTATCGTGCAAAATATACCATAGAGCCTCTTCTCTTGGAGTTTTCGAACAAAATTACTCTTTGTTTGACACCTGAGTCATTATGACCTCATCTTCGATGTGAAATTCCACATTGGATGGAGGGGGGAACGACGTATTCCTTATAAGGGTATGAAAATCTTTTCCTACTAGGCACGTTTTAAAGTCGTGAAGCTGATAGTGAAATGTAACGGGCCAATGTGAACAATATATGCTAGTGGTGGACTTGGACTATTATGTTCGAGGCTCATAGCTTCTTTATTTTGATACCATATGCAATTATAACTTAGCGATAATTGACACGTACTCTTTTAATTAATGTTAAATATTCAAATCTTGAAATCTTGTATTAAAATTTTAATTTTGGTCTATAAATATAAAAATGTATTTAAATGGGTAAACCAATATATTTTTATTTTATTTTATTTTGTAACATATTTTTTAAAAATAAAGTTACATAAGAAAATGAATGGGTTGTCTTGTGAATCATTGAATACTTTTGTACTTGTTTATCCTCTTCTATATATTCTTGATATATCAATTAATCAAATTATTACATTTCATCCTTATCTAATTTCTTCAAACCGTCCAAGTTCACCGCTAACAAATGTTGTTCACTTTAGCCCATCTTTACGGGTTTAAAACGTGTCTACTAGGAAGAAGTGTGGACCACACTTTTATAAGAAATGTTTTGTTCCCCTCTCCAATCGGTGTGAGATCTCACAATTCACCCCTTTGGCTAGCTCTAATACCATTTTGTAACAGCTCAAGCTCACCGCTAGCAGATATTGTTCGTTTTGGTCCGTTACGTATTGCTGTCAACCTCACGACTTTAAAACGTGTCTACTAAGAGAAGGTTTCCACGCCCTTATAAAGAATGTTTTGTTCTCCTTTCTAACGGATCAGATCTCTTTTAAAAATTATTGAAATTTATTATAGTACAATAATTTTAATATTTATAATATATTTATTAGAAAATAGACGGAATATATAATATTTCTTAAAAAAAAAAACAAACAAAATCACTAAATTAATGGTGGGCGTTTACGAAGAAAAATCTAATATATATTAATTGATCATCCGATTAAAATTCCGTGGAATCTATTAATATTTAAAAATATATATATTTATAAAAGCAAAATTTGAGTATAGAAAAATTTGACCAACTATCCGTTATATCACGATTATGTACCTATAATTATGATAGTACGATGATGAATTCATTTATGATTAGTCCACATATGCATTTCAGTTGGTATAAGCACGATGACGCTCCCTCATGTTTATCATTATGTATGCATCACAATACGTTATGATGTACTATGTTGAGACTCTAGAGGGCGGCCAATTACCTTCACATATGGTTAAAAGTCATTTATGGCTTGTCCACATATGTATCTTTGTTGGCAGACAGATTGAGTCGTTCTCCCCTACTACGATGCTACTATGATGAGACTCTAGAGGATTATCAGCTATTTCTAACAGTAATGAAGTCAACTAACCTCAAGTAGATAATTTAGTTGGTTTGGCAAGTTCCAGCTAATTGCACACTTACACCAATTAAGCTTAGAAGCATGATTGTTACAGGATAGAAAATTGGCAAAGATGAAAATGGTATCAGAGCCAGTCACCGGACGATGTGCCGGCCTTCTCGCTGTTCCCCGAAGGGGGGTAGACACGAGGCGGTGTGCCAGTGAGGACGCTGAGCCTCGAAGGGGGGTGGATTGTGATGTCCCACATTGGTTGGGGAGGAGAACAAATCACCATTTATAAGGGTGTGGAAACCTTCCCCCTAGCAGACGCGTTTTAAAGCCTTGAGGGGAAGCCCAAAAGGGAAAGCTCAAAGAGGACAATATCTACCAGCGGTGGATCTGGGTCGTTACAATTGTTGTGTTTCAAGGTAGGTAGGAATGAGTGATCAAAACCCAGATGTGCAAAGTATCAAGAGTCCACCATTTCAATAGGTAACGGTATAAAATATTTAAATTGGGTTACTTTGAGTTATTCATTATGTGTATCTCTCAATTGGTAAGTCATCTGAAAAGACCGATGTTTTTTGTTATGGCGAAGTTGAAGTTGAGCAAATGATTTGAATAACACTTCTCTACCCACAGAGCGCTCTCATGGACCAACCGAAAATGTCGGATGTTGTGATGATGCTCGAAGGAGACGACTTGACTGAGCGTTGGGAGGAATGGAAGAGAGTCGAGGTAGTCTACCACGAAACTAAATTTGCATCTTTTCAAACGTTCTGAATGGATGATTGATGAGACAGAAAATGTTTGTTGTTTTGAGCTATGCAGTCCTAGGTAGGTTAACCTTATTTGAACACTTAATGAGCTTGTAACAATCCAAGCCCACCACTAGTACATAGTGTTCTGTTTGGGCTTTCTCTTCCGAGCTTCCCCTCAAAGATTTTAAAACGTGTCTGTTGGGATAAGTTTCACACCTTTAACAAGAATGTTTGGTTCCTTTCTAATTTTGTAATTAATAAATTTCTTTTTGTTTTGTAATTAATAAGTTATTATAAAGGAAAAAAATAATTAACTAAATATAAAATTGAATTTATGACTAAAAAAATTTTAATTTCTAAAAAATTATGAAAAAAAATCGAAAATTCAAAATCTAAATTGAAGTTGGAGGTGGTAGCGGACCGTAAGGAGTTCAGAGAGAACGGAGGCATCTTCAATTGCTCAGAGACGCCGCCGTCTGAAACCCTAATTTCATTTTGTTTGCCTCTGTGTTCTTAAATGTACGCGCTGAGATCATCGTTCTCTATTTCCTCTCGCTATAATCCTTCCTCCTTGCTCCGAATTGATCCGCTCTTGTACTGTTTCTTCTCTTCTTCTTCCCACAGCCAAGCCTCTGCTTCATATGGAATCGTCGTTCAATACCTTATTGATACCTTCGAACTCTCCCCCGCCAGAGCGGTGTCGATTATGAGTAGCCGCAGAGGCCTTGAATCGACGGAAAAGCCTCAATCCGTTTACAAATATCTTTCAGAGCTCGGATTCTCCAAAGCTCACATTCAATCGACGATTCGCCTTGCGCCGCAGATCGCGTTTTCCAACATCGAAAGGACTCTGAAGCCGAAGATTGAGTTCTTCCAGAATCTTGGCTTGGTCGGCTCCGATTTGGGTAGGTTCGTTTCCAAGCATTCTACGCTTTTGACTATTAGTTTGGAGAAGAGATTGATGCCTAGTGTTGAGATTCTTAAGAGTGTTTTCCCCAAGGATGAGTGTAATAGCGATCTCCTGCAAGTTATGCAGCGATGTTCTGATATGCTTATGCGATCTCCGTATACAAGGTTGCTTGTCAATATTAATTACTTACAAAGTTGTGGGATTGTTGGTTCTCAACTCTCTATGTTACTGAAGAGGCAACCTGCACTCTTTGGTATGCGTGAATCTCAAGTTAGAGATATTGTTTCCATGGTTGTAGAGACTGGTTTTTCTACAAATACTAAAATGTTTGTTCATGGACTTCATTCTATCAGTAGTGTAAGTAATGCGACCTTCAAGAAGAAAGTGGGATTGATTTGCAGCTTTGGAATAACTGAGAAGGAATGTATGAGAATGTTTACTTCTGCTCCTGGTTTGATAAGAACCTCCGTTGGTAAACTTAAACGTGGTCTAGAATTCTTTATGAATGAGGCAGAAGTCAGTAGATCAGATATTGTTCGTAAACCTACTTGTTTGATGCACGCCATGCAGGGGAGGGTGCTCCCTCGGTATAGAGTTCTTCAGGTTGTAAAGTCGACGAGGCTATTGAAGAAACACCCGCAATTGCTTGATATATTGGGGATGTCTGATGAGGATTTCTTGGATAAATTCGTGCACAGGTTTCCTGATCATGTGACAGAATTGTTGGCTGCCTTTAGAGGTCAATGTATGGATGAATTGCAGCCTATGGAGTTGGAAACA

mRNA sequence

TCATCGTTCTCTATTTCCTCTCGCTATAATCCTTCCTCCTTGCTCCGAATTGATCCGCTCTTGTACTGTTTCTTCTCTTCTTCTTCCCACAGCCAAGCCTCTGCTTCATATGGAATCGTCGTTCAATACCTTATTGATACCTTCGAACTCTCCCCCGCCAGAGCGGTGTCGATTATGAGGAGCCGCAGAGGCATTGAATCGACGGAAAAGCCTCAATCCGTTTACAAATATCTTTCAGAGCTCGGATTCTCCAAAGCTCACATTCAATCGACGATTCGCCTTGCGCCGCAGATCGCGTTTTCCAACATCGAAAGGACTCTGAAGCCGAAGATTGAGTTCTTCCAGAATCTTGGCTTGGTCGGCTCCGATTTGGGTAGGTTCATTTCCAAGCATTCTACGCTTTTGACTGTTAGTTTGGAGAAGAAATTGATGCCTAGTGTTGAGATTCTTCAGAGTGTTTTCCCCAAGGATGAGTGTAATAGCGATCTCCTGCAAGGTATGCAGCGATGTTGTGATAAGCTTATGCGATTTCCGTATACAAGGTTGCTTGTCAATATTAATTACTTACAAAGTTGCGGGATTGTTGGTTCTCAACTCTCTATGTTACTGAAGAGGCAACCTGCACTTTTTGGTAAGCGTGAATCTCAAGTTAGAGATATTGTTTCCATGGTTGTAGAGACTGGTTTTTCTACAAATACTAAAATGTTTGTTCATGGACTTCATGCTATCAGTAGTGTAACGAATGCGACCTTCAAGAAGAAAGTGGAATTGATTTGCAGCTTTGGAATAACTGAGAAGGAATGTATGAGAATGTTTACTTCTGCTCCTGTTTTGATAAGAACCTCCGGTGGTAAACTTAAACGTGGTCTAGAATTCTTTATGAATGAGGCAGAAGTCAGTAGATCAGATATTGTTCGTAAACCTACTTGTTTGATGCACGCCATGGAGGGGAGGGTGCTCCCTCGGTATAGAGTTCTTCAGGTCGTAAAGTCGAAGAGGCTATTGATGAAACACCCGCAATTGATTGATATATTGGGGATGTCTGATGAGGATTTCTTGGATAAATTCGTGCACAGGTTTCCTGATCATACTCTGAAGCCGAAGATCGAGTTCTTCCAGAATCTTGGCTTGGTCGGCTCCGATTTGGGTAGGTTCATTTCCAAGCATTCTACGCTTTTGACTGTTAGTTTGGAGAAGAAATTGATGCCTAGTGTTGAGATTCTTCAGAGTGTTTTCCCCAAGGATGAGTGTAATAGCGATCTCCTGCAAGGTATGCAGCGATGTTGTGATAAGCTTATGCGATTTCCGTATACAAGGTTGCTTGTCAATATTAATTACTTACAAAGTTGCGGGATTGTTGGTTCTCAACTCTCTATGTTACTGAAGAGGCAACCTGCACTTTTTGGTAAGCGTGAATCTCAAGTTAGAGATATTGTTTCCATGGTTGTAGAGACTGGTTTTTCTACAAATACTAAAATGTTTGTTCATGGACTTCATGCTATCAGTAGTGTAACGAATGCGACCTTCAAGAAGAAAGTGGAATTGATTTGCAGCTTTGGAATAACTGAGAAGGAATGTATGAGAATGTTTACTTCTGCTCCTGTTTTGATAAGAACCTCCGGTGGTAAACTTAAACGTGGTCTAGAATTCTTTATGAATGAGGCAGAAGTCAGTAGATCAGATATTGTTCGTAAACCTACTTGTTTGATGCACGCCATGGAGGGGAGGGTGCTCCCTCGGTATAGAGTTCTTCAGGTCGTAAAGTCGAAGAGGCTATTGATGAAACACCCGCAATTGATTGATATATTGGGGATGTCTGATGAGGATTTCTTGGATAAATTCGTGCACAGGTTTCCTGATCATGTGACAGAATTATCATCGTTCTCTATTTCCTCTCGCTATAATCCTTCCTCCTTGCTCCGAATTGATCCGCTCTTGTACTGTTTCTTCTCTTCTTCTTCCCACAGCCAAGCCTCTGCTTCATATGGAATCGTCGTTCAATACCTTATTGATACCTTCGAACTCTCCCCCGCCAGAGCGGTGTCGATTATGAGTAGCCGCAGAGGCCTTGAATCGACGGAAAAGCCTCAATCCGTTTACAAATATCTTTCAGAGCTCGGATTCTCCAAAGCTCACATTCAATCGACGATTCGCCTTGCGCCGCAGATCGCGTTTTCCAACATCGAAAGGACTCTGAAGCCGAAGATTGAGTTCTTCCAGAATCTTGGCTTGGTCGGCTCCGATTTGGGTAGGTTCGTTTCCAAGCATTCTACGCTTTTGACTATTAGTTTGGAGAAGAGATTGATGCCTAGTGTTGAGATTCTTAAGAGTGTTTTCCCCAAGGATGAGTGTAATAGCGATCTCCTGCAAGTTATGCAGCGATGTTCTGATATGCTTATGCGATCTCCGTATACAAGGTTGCTTGTCAATATTAATTACTTACAAAGTTGTGGGATTGTTGGTTCTCAACTCTCTATGTTACTGAAGAGGCAACCTGCACTCTTTGGTATGCGTGAATCTCAAGTTAGAGATATTGTTTCCATGGTTGTAGAGACTGGTTTTTCTACAAATACTAAAATGTTTGTTCATGGACTTCATTCTATCAGTAGTGTAAGTAATGCGACCTTCAAGAAGAAAGTGGGATTGATTTGCAGCTTTGGAATAACTGAGAAGGAATGTATGAGAATGTTTACTTCTGCTCCTGGTTTGATAAGAACCTCCGTTGGTAAACTTAAACGTGGTCTAGAATTCTTTATGAATGAGGCAGAAGTCAGTAGATCAGATATTGTTCGTAAACCTACTTGTTTGATGCACGCCATGCAGGGGAGGGTGCTCCCTCGGTATAGAGTTCTTCAGGTTGTAAAGTCGACGAGGCTATTGAAGAAACACCCGCAATTGCTTGATATATTGGGGATGTCTGATGAGGATTTCTTGGATAAATTCGTGCACAGGTTTCCTGATCATGTGACAGAATTGTTGGCTGCCTTTAGAGGTCAATGTATGGATGAATTGCAGCCTATGGAGTTGGAAACA

Coding sequence (CDS)

TCATCGTTCTCTATTTCCTCTCGCTATAATCCTTCCTCCTTGCTCCGAATTGATCCGCTCTTGTACTGTTTCTTCTCTTCTTCTTCCCACAGCCAAGCCTCTGCTTCATATGGAATCGTCGTTCAATACCTTATTGATACCTTCGAACTCTCCCCCGCCAGAGCGGTGTCGATTATGAGGAGCCGCAGAGGCATTGAATCGACGGAAAAGCCTCAATCCGTTTACAAATATCTTTCAGAGCTCGGATTCTCCAAAGCTCACATTCAATCGACGATTCGCCTTGCGCCGCAGATCGCGTTTTCCAACATCGAAAGGACTCTGAAGCCGAAGATTGAGTTCTTCCAGAATCTTGGCTTGGTCGGCTCCGATTTGGGTAGGTTCATTTCCAAGCATTCTACGCTTTTGACTGTTAGTTTGGAGAAGAAATTGATGCCTAGTGTTGAGATTCTTCAGAGTGTTTTCCCCAAGGATGAGTGTAATAGCGATCTCCTGCAAGGTATGCAGCGATGTTGTGATAAGCTTATGCGATTTCCGTATACAAGGTTGCTTGTCAATATTAATTACTTACAAAGTTGCGGGATTGTTGGTTCTCAACTCTCTATGTTACTGAAGAGGCAACCTGCACTTTTTGGTAAGCGTGAATCTCAAGTTAGAGATATTGTTTCCATGGTTGTAGAGACTGGTTTTTCTACAAATACTAAAATGTTTGTTCATGGACTTCATGCTATCAGTAGTGTAACGAATGCGACCTTCAAGAAGAAAGTGGAATTGATTTGCAGCTTTGGAATAACTGAGAAGGAATGTATGAGAATGTTTACTTCTGCTCCTGTTTTGATAAGAACCTCCGGTGGTAAACTTAAACGTGGTCTAGAATTCTTTATGAATGAGGCAGAAGTCAGTAGATCAGATATTGTTCGTAAACCTACTTGTTTGATGCACGCCATGGAGGGGAGGGTGCTCCCTCGGTATAGAGTTCTTCAGGTCGTAAAGTCGAAGAGGCTATTGATGAAACACCCGCAATTGATTGATATATTGGGGATGTCTGATGAGGATTTCTTGGATAAATTCGTGCACAGGTTTCCTGATCATACTCTGAAGCCGAAGATCGAGTTCTTCCAGAATCTTGGCTTGGTCGGCTCCGATTTGGGTAGGTTCATTTCCAAGCATTCTACGCTTTTGACTGTTAGTTTGGAGAAGAAATTGATGCCTAGTGTTGAGATTCTTCAGAGTGTTTTCCCCAAGGATGAGTGTAATAGCGATCTCCTGCAAGGTATGCAGCGATGTTGTGATAAGCTTATGCGATTTCCGTATACAAGGTTGCTTGTCAATATTAATTACTTACAAAGTTGCGGGATTGTTGGTTCTCAACTCTCTATGTTACTGAAGAGGCAACCTGCACTTTTTGGTAAGCGTGAATCTCAAGTTAGAGATATTGTTTCCATGGTTGTAGAGACTGGTTTTTCTACAAATACTAAAATGTTTGTTCATGGACTTCATGCTATCAGTAGTGTAACGAATGCGACCTTCAAGAAGAAAGTGGAATTGATTTGCAGCTTTGGAATAACTGAGAAGGAATGTATGAGAATGTTTACTTCTGCTCCTGTTTTGATAAGAACCTCCGGTGGTAAACTTAAACGTGGTCTAGAATTCTTTATGAATGAGGCAGAAGTCAGTAGATCAGATATTGTTCGTAAACCTACTTGTTTGATGCACGCCATGGAGGGGAGGGTGCTCCCTCGGTATAGAGTTCTTCAGGTCGTAAAGTCGAAGAGGCTATTGATGAAACACCCGCAATTGATTGATATATTGGGGATGTCTGATGAGGATTTCTTGGATAAATTCGTGCACAGGTTTCCTGATCATGTGACAGAATTATCATCGTTCTCTATTTCCTCTCGCTATAATCCTTCCTCCTTGCTCCGAATTGATCCGCTCTTGTACTGTTTCTTCTCTTCTTCTTCCCACAGCCAAGCCTCTGCTTCATATGGAATCGTCGTTCAATACCTTATTGATACCTTCGAACTCTCCCCCGCCAGAGCGGTGTCGATTATGAGTAGCCGCAGAGGCCTTGAATCGACGGAAAAGCCTCAATCCGTTTACAAATATCTTTCAGAGCTCGGATTCTCCAAAGCTCACATTCAATCGACGATTCGCCTTGCGCCGCAGATCGCGTTTTCCAACATCGAAAGGACTCTGAAGCCGAAGATTGAGTTCTTCCAGAATCTTGGCTTGGTCGGCTCCGATTTGGGTAGGTTCGTTTCCAAGCATTCTACGCTTTTGACTATTAGTTTGGAGAAGAGATTGATGCCTAGTGTTGAGATTCTTAAGAGTGTTTTCCCCAAGGATGAGTGTAATAGCGATCTCCTGCAAGTTATGCAGCGATGTTCTGATATGCTTATGCGATCTCCGTATACAAGGTTGCTTGTCAATATTAATTACTTACAAAGTTGTGGGATTGTTGGTTCTCAACTCTCTATGTTACTGAAGAGGCAACCTGCACTCTTTGGTATGCGTGAATCTCAAGTTAGAGATATTGTTTCCATGGTTGTAGAGACTGGTTTTTCTACAAATACTAAAATGTTTGTTCATGGACTTCATTCTATCAGTAGTGTAAGTAATGCGACCTTCAAGAAGAAAGTGGGATTGATTTGCAGCTTTGGAATAACTGAGAAGGAATGTATGAGAATGTTTACTTCTGCTCCTGGTTTGATAAGAACCTCCGTTGGTAAACTTAAACGTGGTCTAGAATTCTTTATGAATGAGGCAGAAGTCAGTAGATCAGATATTGTTCGTAAACCTACTTGTTTGATGCACGCCATGCAGGGGAGGGTGCTCCCTCGGTATAGAGTTCTTCAGGTTGTAAAGTCGACGAGGCTATTGAAGAAACACCCGCAATTGCTTGATATATTGGGGATGTCTGATGAGGATTTCTTGGATAAATTCGTGCACAGGTTTCCTGATCATGTGACAGAATTGTTGGCTGCCTTTAGAGGTCAATGTATGGATGAATTGCAGCCTATGGAGTTGGAAACA

Protein sequence

SSFSISSRYNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILQSVFPKDECNSDLLQGMQRCCDKLMRFPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVRDIVSMVVETGFSTNTKMFVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSGGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHAMEGRVLPRYRVLQVVKSKRLLMKHPQLIDILGMSDEDFLDKFVHRFPDHTLKPKIEFFQNLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILQSVFPKDECNSDLLQGMQRCCDKLMRFPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVRDIVSMVVETGFSTNTKMFVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSGGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHAMEGRVLPRYRVLQVVKSKRLLMKHPQLIDILGMSDEDFLDKFVHRFPDHVTELSSFSISSRYNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIMSSRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLVGSDLGRFVSKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLMRSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKMFVHGLHSISSVSNATFKKKVGLICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSTRLLKKHPQLLDILGMSDEDFLDKFVHRFPDHVTELLAAFRGQCMDELQPMELET

Homology

[Close]

BLAST of Cp4.1LG14g01570.1 vs. ExPASy Swiss-Prot
Match: Q9FK23 (Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF8 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.3e-10
Identity = 48/231 (20.78%), Postives = 109/231 (47.19%), Query Frame = 0


Query: 721 PQIAFSNIERTLKPKIEFFQNLGLVGSD---LGRFVSKHSTLLTISLEKRLMPSVEILKS 780
           P I  S+++  L P+++F +NL   G D    G  + +   +L+ S+E  +   VE LKS
Sbjct: 239 PVILNSDLDSQLIPRVDFIRNLS--GEDDFATGTVLRRLPAILSYSVE-HMNGQVEFLKS 298

Query: 781 VFPKDECNSDLLQVMQRCSDMLMRSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGM 840
                  +  + +++    +++  S   +L   I +L+ CG     +   L + P +  +
Sbjct: 299 F--AGLTSEQVFKIVHVFPNVISTSKERKLRPRIEFLKECGFDSPGMFKFLSKAPLILAL 358

Query: 841 RESQVRDIVSMVVETGFSTNTKMFVHGLHSISSVSNATFKKKVGLICSFGITEKECMRMF 900
            E+ +   +  +V+ G+   TK     + +++  S+   ++ +GL  S+G++ ++ + M 
Sbjct: 359 SENNLSHKLGFLVKIGYKHRTKELAFAMGAVTRTSSDNMQRVIGLYLSYGLSFEDILAMS 418

Query: 901 TSAPGLIRTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRY 949
           T  P +++ +   L+  LE+ +        +++  P  L + +  R+  RY
Sbjct: 419 TKHPQVLQYNYTSLEEKLEYLIEYMGREVEELLAFPAFLGYKLDSRIKHRY 464

[Close]

BLAST of Cp4.1LG14g01570.1 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.1e-09
Identity = 67/287 (23.34%), Postives = 130/287 (45.30%), Query Frame = 0


Query: 695 KPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLVGSDLGRFVS 754
           K + V ++L +LG  K+ I + +   PQI   ++   LKP + F + LG+  +   + +S
Sbjct: 231 KIKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKIIS 290

Query: 755 KHSTLLTISLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLMRSPYTRLLVNINYL 814
           +   +LT S +K L  +VE L      +E    + +++ RC +++  S   +L   + Y 
Sbjct: 291 RFPAILTYSRQK-LTSTVEFLSQTGLTEE---QIGRILTRCPNIMSYSVEDKLRPTMEYF 350

Query: 815 QSCGIVGSQLSMLLKRQPALFGMR-ESQVRDIVSMVVETGFSTNTKMFVHGLHSISSVSN 874
           +S  +    +++LL R P  FG+  ES ++ +    +E GF         GL  I  + +
Sbjct: 351 RSLNV---DVAVLLHRCPQTFGLSIESNLKPVTEFFLEKGF---------GLDEIGIMIS 410

Query: 875 ATFKKKVGLICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMNEAEVSRSDIVRKP 934
                + G + +F + E    +                    ++F    +  +S++V+ P
Sbjct: 411 -----RYGALYTFSLKENVMPKW-------------------DYFQT-MDYPKSELVKFP 470

Query: 935 TCLMHAMQGRVLPRYRVLQVVKSTRLLKKHPQLLDILGMSDEDFLDK 981
               +++Q R+ PRY ++Q     RLL    Q+L + G+  E  + K
Sbjct: 471 QFFGYSLQERIKPRYELVQ-RSGVRLLLN--QVLSLSGIEFEKVVKK 473

[Close]

BLAST of Cp4.1LG14g01570.1 vs. ExPASy Swiss-Prot
Match: Q9ZT96 (Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF4 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 5.5e-06
Identity = 42/255 (16.47%), Postives = 104/255 (40.78%), Query Frame = 0


Query: 74  VYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLVGSDLGRFISKHST 133
           V KYL  L    + +   +   P++    +E T+   + +   +G+   ++G  ++++  
Sbjct: 218 VVKYLQGLDIKPSDVPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGILTRYPE 277

Query: 134 LLTVSLEKKLMPSVEILQSVFPKDECNSDLLQGMQRCCDKLMRFPY-TRLLVNINYLQSC 193
           +L + + + + P VE L+ +       + L++        ++ F     +  N+  LQ  
Sbjct: 278 ILGMRVARIIKPLVEYLEVLGIPRLAAARLIEKRPH----ILGFELDDTVKPNVQILQDF 337

Query: 194 GIVGSQLSMLLKRQPALFGKRESQVRDIVSMVVETGFSTNTK---MFVHGLHAISSVTNA 253
            +  + L  ++ + P + G       D    ++ +    N +     +  +    S++ +
Sbjct: 338 NVRETSLPSIIAQYPEIIGIDLKPKLDTQRKLLCSAIHLNPEDLGSLIERMPQFVSLSES 397

Query: 254 TFKKKVELICSFGITEKECMRMFTSAPVLIRTSGGKLKRGLEFFMNEAEVSRSDIVRKPT 313
              K ++ +   G +  +   M    P ++  + G +K   E+F  E +    D+V  P 
Sbjct: 398 PMLKHIDFLTKCGFSIDQTREMVIGCPQVLALNLGIMKLSFEYFQKEMKRPLQDLVDFPA 457

Query: 314 CLMHAMEGRVLPRYR 325
              + +E  V PR++
Sbjct: 458 FFTYGLESTVKPRHK 468

[Close]

BLAST of Cp4.1LG14g01570.1 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 7.9e-05
Identity = 52/213 (24.41%), Postives = 86/213 (40.38%), Query Frame = 0


Query: 64  GIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLVGSD 123
           G    E+ + + KY   LG  K  ++  + + P +   ++E+T+ PK+ F Q +G+    
Sbjct: 381 GCSIEERWKPLVKYFYYLGIPKEGMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEA 440

Query: 124 LGRFISKHSTLLTVSLEKKLMPSVEIL---QSVFPKDECNSDLLQGMQRCCDKLMRFPYT 183
           +G  + K  +LLT SL KK+ P V  L     V  KD      +      C        T
Sbjct: 441 IGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAGVTQKDIGKVIAMDPALLGCS-----IGT 500

Query: 184 RLLVNINYLQSCGIVGSQLSMLLKRQPALFG------------KRESQVRDIVSMV-VET 243
           +L  N+ Y  S GI   QL  ++   P L               R + +R +  ++    
Sbjct: 501 KLEPNMRYYISLGIRFYQLGEMIADFPMLLRYNVDNLRPKYRYLRRTMIRPLQDLIEFPR 560

Query: 244 GFSTNTKMFVHGLHAISSVTNATFKKKVELICS 261
            FS + +  +   H I       FK +  L C+
Sbjct: 561 FFSYSLERRIIPRHTIMVENRVNFKLRYMLACT 588

[Close]

BLAST of Cp4.1LG14g01570.1 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 2.3e-04
Identity = 37/142 (26.06%), Postives = 65/142 (45.77%), Query Frame = 0


Query: 694 EKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGL-VGSDLGRF 753
           EK   +  +   LG  +  +   I   P++   +I+  L   + F  +LGL     +G+ 
Sbjct: 112 EKLCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKV 171

Query: 754 VSKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLMRSPYTRLLVNIN 813
           + K+  L+  S++KRL P+ E LKS     E    +  V+     +L R     L  N +
Sbjct: 172 LVKNPFLMGYSVDKRLRPTTEFLKSSVGLSE--DGIKSVVMNFPQLLCRDVNKILKPNYD 231

Query: 814 YLQSCGIVGSQLSMLLKRQPAL 835
           YL+ CG   SQ++ ++   P +
Sbjct: 232 YLKECGFGDSQIATMVTGYPQI 251

[Close]

BLAST of Cp4.1LG14g01570.1 vs. NCBI nr
Match: XP_023552363.1 (transcription termination factor MTEF1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 755 bits (1949), Expect = 9.60e-265
Identity = 386/386 (100.00%), Postives = 386/386 (100.00%), Query Frame = 0


Query: 626  SSFSISSRYNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIMS 685
            SSFSISSRYNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIMS
Sbjct: 6    SSFSISSRYNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIMS 65

Query: 686  SRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLV 745
            SRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLV
Sbjct: 66   SRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLV 125

Query: 746  GSDLGRFVSKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLMRSPYT 805
            GSDLGRFVSKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLMRSPYT
Sbjct: 126  GSDLGRFVSKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLMRSPYT 185

Query: 806  RLLVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKMFVHGL 865
            RLLVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKMFVHGL
Sbjct: 186  RLLVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKMFVHGL 245

Query: 866  HSISSVSNATFKKKVGLICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMNEAEVS 925
            HSISSVSNATFKKKVGLICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMNEAEVS
Sbjct: 246  HSISSVSNATFKKKVGLICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMNEAEVS 305

Query: 926  RSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSTRLLKKHPQLLDILGMSDEDFLDKFVHRF 985
            RSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSTRLLKKHPQLLDILGMSDEDFLDKFVHRF
Sbjct: 306  RSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSTRLLKKHPQLLDILGMSDEDFLDKFVHRF 365

Query: 986  PDHVTELLAAFRGQCMDELQPMELET 1011
            PDHVTELLAAFRGQCMDELQPMELET
Sbjct: 366  PDHVTELLAAFRGQCMDELQPMELET 391

[Close]

BLAST of Cp4.1LG14g01570.1 vs. NCBI nr
Match: XP_022929189.1 (uncharacterized protein LOC111435860 [Cucurbita moschata])

HSP 1 Score: 736 bits (1900), Expect = 3.11e-257
Identity = 376/386 (97.41%), Postives = 381/386 (98.70%), Query Frame = 0


Query: 626  SSFSISSRYNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIMS 685
            SSFSISSR+NPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIM 
Sbjct: 6    SSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIMR 65

Query: 686  SRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLV 745
            SRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLV
Sbjct: 66   SRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLV 125

Query: 746  GSDLGRFVSKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLMRSPYT 805
            GSDLGRF+SKHSTLLT+SLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLMRSPYT
Sbjct: 126  GSDLGRFISKHSTLLTVSLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLMRSPYT 185

Query: 806  RLLVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKMFVHGL 865
            RLLVNI+YLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKMFVHGL
Sbjct: 186  RLLVNISYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKMFVHGL 245

Query: 866  HSISSVSNATFKKKVGLICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMNEAEVS 925
            HSISSVSNATFKKKV LICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMNEAEVS
Sbjct: 246  HSISSVSNATFKKKVELICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMNEAEVS 305

Query: 926  RSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSTRLLKKHPQLLDILGMSDEDFLDKFVHRF 985
            RSDIV KPTCLMHAMQGRVLPRYRVLQVVKS RLL+KHPQLLDILGMSDEDFLDKFVHRF
Sbjct: 306  RSDIVCKPTCLMHAMQGRVLPRYRVLQVVKSKRLLEKHPQLLDILGMSDEDFLDKFVHRF 365

Query: 986  PDHVTELLAAFRGQCMDELQPMELET 1011
            PDHVTELLAAFRGQCMDELQP ELET
Sbjct: 366  PDHVTELLAAFRGQCMDELQPKELET 391

[Close]

BLAST of Cp4.1LG14g01570.1 vs. NCBI nr
Match: KAG7015351.1 (Transcription termination factor MTERF8, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 725 bits (1871), Expect = 6.01e-253
Identity = 369/386 (95.60%), Postives = 378/386 (97.93%), Query Frame = 0


Query: 626  SSFSISSRYNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIMS 685
            SSFSISSR+NPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIM 
Sbjct: 6    SSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIMR 65

Query: 686  SRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLV 745
            SRRG++STEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLV
Sbjct: 66   SRRGIKSTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLV 125

Query: 746  GSDLGRFVSKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLMRSPYT 805
            GSDLGRF+SKHSTLLT+SLEK+LMPSVEILKSVFPKDECNSDLLQVMQRCSD LMRSPYT
Sbjct: 126  GSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQVMQRCSDKLMRSPYT 185

Query: 806  RLLVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKMFVHGL 865
            RLLVNINYLQSCGIVGSQLSMLLKRQPALFG RESQVRDIVSMVVETGFSTNTKMFVHGL
Sbjct: 186  RLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVRDIVSMVVETGFSTNTKMFVHGL 245

Query: 866  HSISSVSNATFKKKVGLICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMNEAEVS 925
            H+ISSV+NATF+KKV LICSFGITEKECMRMFTSAP LIRTSVGKLKRGLEFFMNEAEVS
Sbjct: 246  HAISSVTNATFQKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMNEAEVS 305

Query: 926  RSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSTRLLKKHPQLLDILGMSDEDFLDKFVHRF 985
            RSDIVRKPTCLMHAMQGRVLPRYRVLQVVKS  LLKKHPQLLDILGMSDEDFLDKFVHRF
Sbjct: 306  RSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDKFVHRF 365

Query: 986  PDHVTELLAAFRGQCMDELQPMELET 1011
            PDHVTELLAAFRGQCMDELQP ELET
Sbjct: 366  PDHVTELLAAFRGQCMDELQPKELET 391

[Close]

BLAST of Cp4.1LG14g01570.1 vs. NCBI nr
Match: XP_023552360.1 (uncharacterized protein LOC111810052 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023552361.1 uncharacterized protein LOC111810052 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 717 bits (1850), Expect = 8.98e-250
Identity = 365/386 (94.56%), Postives = 374/386 (96.89%), Query Frame = 0


Query: 626  SSFSISSRYNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIMS 685
            SSFSISSRYNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIM 
Sbjct: 6    SSFSISSRYNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIMR 65

Query: 686  SRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLV 745
            SRRG+ESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLV
Sbjct: 66   SRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLV 125

Query: 746  GSDLGRFVSKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLMRSPYT 805
            GSDLGRF+SKHSTLLT+SLEK+LMPSVEIL+SVFPKDECNSDLLQ MQRC D LMR PYT
Sbjct: 126  GSDLGRFISKHSTLLTVSLEKKLMPSVEILQSVFPKDECNSDLLQGMQRCCDKLMRFPYT 185

Query: 806  RLLVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKMFVHGL 865
            RLLVNINYLQSCGIVGSQLSMLLKRQPALFG RESQVRDIVSMVVETGFSTNTKMFVHGL
Sbjct: 186  RLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVRDIVSMVVETGFSTNTKMFVHGL 245

Query: 866  HSISSVSNATFKKKVGLICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMNEAEVS 925
            H+ISSV+NATFKKKV LICSFGITEKECMRMFTSAP LIRTS GKLKRGLEFFMNEAEVS
Sbjct: 246  HAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSGGKLKRGLEFFMNEAEVS 305

Query: 926  RSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSTRLLKKHPQLLDILGMSDEDFLDKFVHRF 985
            RSDIVRKPTCLMHAM+GRVLPRYRVLQVVKS RLL KHPQL+DILGMSDEDFLDKFVHRF
Sbjct: 306  RSDIVRKPTCLMHAMEGRVLPRYRVLQVVKSKRLLMKHPQLIDILGMSDEDFLDKFVHRF 365

Query: 986  PDHVTELLAAFRGQCMDELQPMELET 1011
            PDHVTELLAAFRGQCMDELQP ELET
Sbjct: 366  PDHVTELLAAFRGQCMDELQPKELET 391

[Close]

BLAST of Cp4.1LG14g01570.1 vs. NCBI nr
Match: XP_022929526.1 (uncharacterized protein LOC111436067 [Cucurbita moschata])

HSP 1 Score: 716 bits (1847), Expect = 2.55e-249
Identity = 364/386 (94.30%), Postives = 374/386 (96.89%), Query Frame = 0


Query: 626  SSFSISSRYNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIMS 685
            SSFSISSR+NPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIM 
Sbjct: 6    SSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIMR 65

Query: 686  SRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLV 745
            SRRG+ESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIE+TLKPKIEFFQN GLV
Sbjct: 66   SRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQNFGLV 125

Query: 746  GSDLGRFVSKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLMRSPYT 805
            GSDLGRF+SKHSTLLT+SLEK+LMPSVEILKSVFPKDECNSDLLQ MQRC D LMRSPYT
Sbjct: 126  GSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQGMQRCCDKLMRSPYT 185

Query: 806  RLLVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKMFVHGL 865
            RLLVNINYLQSCGIVGSQLSMLLKRQPALFG RESQVR+IVSMVVETGFSTNTKMFVHGL
Sbjct: 186  RLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVREIVSMVVETGFSTNTKMFVHGL 245

Query: 866  HSISSVSNATFKKKVGLICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMNEAEVS 925
            H+ISSV+NATFKKKV LICSFGITEKECMRMFTSAP LIRTSVGKLKRGLEFFMNEAEVS
Sbjct: 246  HAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMNEAEVS 305

Query: 926  RSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSTRLLKKHPQLLDILGMSDEDFLDKFVHRF 985
            RSDIVRKPTCLMHAMQGRVLPRYRVLQVVKS  LLKKHPQLLDILGMSDEDFLDKFVHRF
Sbjct: 306  RSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDKFVHRF 365

Query: 986  PDHVTELLAAFRGQCMDELQPMELET 1011
            PDHV ELLAAFRGQCMDELQP +LET
Sbjct: 366  PDHVIELLAAFRGQCMDELQPKQLET 391

[Close]

BLAST of Cp4.1LG14g01570.1 vs. ExPASy TrEMBL
Match: A0A6J1EN21 (uncharacterized protein LOC111435860 OS=Cucurbita moschata OX=3662 GN=LOC111435860 PE=4 SV=1)

HSP 1 Score: 736 bits (1900), Expect = 1.50e-257
Identity = 376/386 (97.41%), Postives = 381/386 (98.70%), Query Frame = 0


Query: 626  SSFSISSRYNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIMS 685
            SSFSISSR+NPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIM 
Sbjct: 6    SSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIMR 65

Query: 686  SRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLV 745
            SRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLV
Sbjct: 66   SRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLV 125

Query: 746  GSDLGRFVSKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLMRSPYT 805
            GSDLGRF+SKHSTLLT+SLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLMRSPYT
Sbjct: 126  GSDLGRFISKHSTLLTVSLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLMRSPYT 185

Query: 806  RLLVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKMFVHGL 865
            RLLVNI+YLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKMFVHGL
Sbjct: 186  RLLVNISYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKMFVHGL 245

Query: 866  HSISSVSNATFKKKVGLICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMNEAEVS 925
            HSISSVSNATFKKKV LICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMNEAEVS
Sbjct: 246  HSISSVSNATFKKKVELICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMNEAEVS 305

Query: 926  RSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSTRLLKKHPQLLDILGMSDEDFLDKFVHRF 985
            RSDIV KPTCLMHAMQGRVLPRYRVLQVVKS RLL+KHPQLLDILGMSDEDFLDKFVHRF
Sbjct: 306  RSDIVCKPTCLMHAMQGRVLPRYRVLQVVKSKRLLEKHPQLLDILGMSDEDFLDKFVHRF 365

Query: 986  PDHVTELLAAFRGQCMDELQPMELET 1011
            PDHVTELLAAFRGQCMDELQP ELET
Sbjct: 366  PDHVTELLAAFRGQCMDELQPKELET 391

[Close]

BLAST of Cp4.1LG14g01570.1 vs. ExPASy TrEMBL
Match: A0A6J1END2 (uncharacterized protein LOC111436067 OS=Cucurbita moschata OX=3662 GN=LOC111436067 PE=3 SV=1)

HSP 1 Score: 716 bits (1847), Expect = 1.24e-249
Identity = 364/386 (94.30%), Postives = 374/386 (96.89%), Query Frame = 0


Query: 626  SSFSISSRYNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIMS 685
            SSFSISSR+NPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIM 
Sbjct: 6    SSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIMR 65

Query: 686  SRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLV 745
            SRRG+ESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIE+TLKPKIEFFQN GLV
Sbjct: 66   SRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQNFGLV 125

Query: 746  GSDLGRFVSKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLMRSPYT 805
            GSDLGRF+SKHSTLLT+SLEK+LMPSVEILKSVFPKDECNSDLLQ MQRC D LMRSPYT
Sbjct: 126  GSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQGMQRCCDKLMRSPYT 185

Query: 806  RLLVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKMFVHGL 865
            RLLVNINYLQSCGIVGSQLSMLLKRQPALFG RESQVR+IVSMVVETGFSTNTKMFVHGL
Sbjct: 186  RLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVREIVSMVVETGFSTNTKMFVHGL 245

Query: 866  HSISSVSNATFKKKVGLICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMNEAEVS 925
            H+ISSV+NATFKKKV LICSFGITEKECMRMFTSAP LIRTSVGKLKRGLEFFMNEAEVS
Sbjct: 246  HAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMNEAEVS 305

Query: 926  RSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSTRLLKKHPQLLDILGMSDEDFLDKFVHRF 985
            RSDIVRKPTCLMHAMQGRVLPRYRVLQVVKS  LLKKHPQLLDILGMSDEDFLDKFVHRF
Sbjct: 306  RSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDKFVHRF 365

Query: 986  PDHVTELLAAFRGQCMDELQPMELET 1011
            PDHV ELLAAFRGQCMDELQP +LET
Sbjct: 366  PDHVIELLAAFRGQCMDELQPKQLET 391

[Close]

BLAST of Cp4.1LG14g01570.1 vs. ExPASy TrEMBL
Match: A0A6J1JB80 (uncharacterized protein LOC111482884 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482884 PE=3 SV=1)

HSP 1 Score: 714 bits (1844), Expect = 3.51e-249
Identity = 364/386 (94.30%), Postives = 376/386 (97.41%), Query Frame = 0


Query: 626  SSFSISSRYNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIMS 685
            SSFSISSR+NP SLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIMS
Sbjct: 6    SSFSISSRHNPPSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIMS 65

Query: 686  SRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLV 745
            SRRG+ STEKPQSVYKYLSELGFS+AHIQSTIRLAPQIAFSNIE+TLKPKIEFFQNLGLV
Sbjct: 66   SRRGIASTEKPQSVYKYLSELGFSEAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQNLGLV 125

Query: 746  GSDLGRFVSKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLMRSPYT 805
            GSDLGRF+SKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDLLQV++RCSDMLMRSPYT
Sbjct: 126  GSDLGRFISKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDLLQVLRRCSDMLMRSPYT 185

Query: 806  RLLVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKMFVHGL 865
            RL VNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRD+VSMVVETGFSTNT+MFVHGL
Sbjct: 186  RLPVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDLVSMVVETGFSTNTRMFVHGL 245

Query: 866  HSISSVSNATFKKKVGLICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMNEAEVS 925
            H+ISSVSNATFKKKV LICSFGITEKECMRMFTSAP LIRTSVGKLKRGLEFFMNEAEVS
Sbjct: 246  HAISSVSNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMNEAEVS 305

Query: 926  RSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSTRLLKKHPQLLDILGMSDEDFLDKFVHRF 985
            RSDIVRKPTCLMHAMQGRVLPRYRVLQVV S RL KKH QL+DILGMSDE+FLDKFVHRF
Sbjct: 306  RSDIVRKPTCLMHAMQGRVLPRYRVLQVVNSKRLSKKHLQLIDILGMSDENFLDKFVHRF 365

Query: 986  PDHVTELLAAFRGQCMDELQPMELET 1011
            PDHVTELLAAFRGQCMDELQP ELET
Sbjct: 366  PDHVTELLAAFRGQCMDELQPKELET 391

[Close]

BLAST of Cp4.1LG14g01570.1 vs. ExPASy TrEMBL
Match: A0A6J1J5Y4 (uncharacterized protein LOC111482884 isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111482884 PE=3 SV=1)

HSP 1 Score: 703 bits (1814), Expect = 1.03e-244
Identity = 360/381 (94.49%), Postives = 369/381 (96.85%), Query Frame = 0


Query: 626  SSFSISSRYNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIMS 685
            SSFSISSR+NP SLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIMS
Sbjct: 6    SSFSISSRHNPPSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIMS 65

Query: 686  SRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLV 745
            SRRG+ STEKPQSVYKYLSELGFS+AHIQSTIRLAPQIAFSNIE+TLKPKIEFFQNLGLV
Sbjct: 66   SRRGIASTEKPQSVYKYLSELGFSEAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQNLGLV 125

Query: 746  GSDLGRFVSKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLMRSPYT 805
            GSDLG F+SKHSTLLTISLEKRLMPSVEILKSVFPKDECNSD LQVM+RCSDML RSPYT
Sbjct: 126  GSDLGWFISKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDFLQVMRRCSDMLKRSPYT 185

Query: 806  RLLVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKMFVHGL 865
            RLLVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKMFVHGL
Sbjct: 186  RLLVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKMFVHGL 245

Query: 866  HSISSVSNATFKKKVGLICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMNEAEVS 925
            H+ISSVSNATFKKKV LICSFGITEKECMRMFTSAP LIRTSVGKLKRGLEFFMNEAEVS
Sbjct: 246  HAISSVSNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMNEAEVS 305

Query: 926  RSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSTRLLKKHPQLLDILGMSDEDFLDKFVHRF 985
            RSDIVRKPTCLMHAMQGRVLPRYRVLQVV S RL KKH QL+DILGMSDE+FLDKFVHRF
Sbjct: 306  RSDIVRKPTCLMHAMQGRVLPRYRVLQVVNSKRLSKKHLQLIDILGMSDENFLDKFVHRF 365

Query: 986  PDHVTELLAAFRGQCMDELQP 1006
            PD VTELLAAFRGQCMDELQP
Sbjct: 366  PDQVTELLAAFRGQCMDELQP 386

[Close]

BLAST of Cp4.1LG14g01570.1 vs. ExPASy TrEMBL
Match: A0A6J1C8W1 (uncharacterized protein LOC111008506 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008506 PE=3 SV=1)

HSP 1 Score: 556 bits (1433), Expect = 3.80e-187
Identity = 286/386 (74.09%), Postives = 336/386 (87.05%), Query Frame = 0


Query: 626  SSFSISSRY-NPSSLLRIDP-LLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSI 685
            S FS+S+R+ +P     IDP L Y F SSSS  +ASA+  IVVQYL+D F LS ARA++I
Sbjct: 6    SIFSLSARHCHP-----IDPPLCYFFSSSSSRREASAANAIVVQYLVDNFNLSTARALAI 65

Query: 686  MSSRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLG 745
            MS R+G+ESTEKP+SV KYLSELGFS AHIQS IR++PQIAFS++E+TLKPKIEFFQNLG
Sbjct: 66   MSCRKGVESTEKPRSVCKYLSELGFSDAHIQSAIRISPQIAFSSVEKTLKPKIEFFQNLG 125

Query: 746  LVGSDLGRFVSKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLMRSP 805
            LVGSDLG+F+S HS+LLT+SL+ +L PSVEILK+VFPKDE NS+LLQVM+RCSD+LMR P
Sbjct: 126  LVGSDLGKFISNHSSLLTVSLKNKLRPSVEILKNVFPKDEDNSNLLQVMRRCSDILMRCP 185

Query: 806  YTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKMFVH 865
             +RLLVNINY +SCGIV SQLSMLLKRQP LFG RES+VRD+VSM VETGFSTNTKMFVH
Sbjct: 186  ESRLLVNINYFRSCGIVDSQLSMLLKRQPVLFGRRESRVRDLVSMAVETGFSTNTKMFVH 245

Query: 866  GLHSISSVSNATFKKKVGLICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMNEAE 925
            GLH+ISSVSNATFKKKV LICSFG TEKECM+MFTSAP LIRTS+ KLK G+EFFMNEA+
Sbjct: 246  GLHAISSVSNATFKKKVELICSFGFTEKECMKMFTSAPVLIRTSIAKLKTGIEFFMNEAK 305

Query: 926  VSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSTRLLKKHPQLLDILGMSDEDFLDKFVH 985
            VSRS IVR+PT LMH+MQGRVLPRYRVLQVVKS RL +K+P+L+D LG+S+EDF DKFV+
Sbjct: 306  VSRSLIVRRPTSLMHSMQGRVLPRYRVLQVVKSKRLTRKNPELVDTLGISEEDFFDKFVY 365

Query: 986  RFPDHVTELLAAFRGQCMDELQPMEL 1009
            RFPD+V +LL A+ GQC+D L+  EL
Sbjct: 366  RFPDNVEDLLVAYSGQCVDALRRKEL 386

[Close]

BLAST of Cp4.1LG14g01570.1 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 255.0 bits (650), Expect = 2.6e-67
Identity = 149/368 (40.49%), Postives = 231/368 (62.77%), Query Frame = 0


Query: 641  RIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARAVSIMSSRRGLESTEKPQSVY 700
            R D  L     SS+ + AS S    V++L D     P  A++I      L+S E+P+SV 
Sbjct: 17   RWDRALSLHHFSSNATPASISNPAFVEFLRDNGFQKPL-AIAIAMRYPNLKSLEQPRSVI 76

Query: 701  KYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLVGSDLGRFVSKHSTLL 760
            + L    FS   IQ +IR+ P++ F N+E+ L+PK+ FF+++G  GS LG+FVS++S+++
Sbjct: 77   QMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQNSSVV 136

Query: 761  TISLEKRLMPSVEILKS-VFPKDECNSDLLQVMQRCSDMLM-RSPYTRLLVNINYLQSCG 820
             +SL K+L+P+VEILKS V PK E   DL  ++ RC  +L+ R P   LL NI+YL++CG
Sbjct: 137  GVSLVKKLIPTVEILKSIVAPKHE---DLPVILSRCGWLLLSRDPNLFLLPNISYLETCG 196

Query: 821  IVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKMFVHGLHSISSVSNATFKK 880
            IVGSQL+ LL+RQP +F + E ++R  VS  ++ GF+ N++M VH + S+SS+S  TF +
Sbjct: 197  IVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFDR 256

Query: 881  KVGLICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMH 940
            KV L  + G +E E   +   +PGLIR S  KL  G EF++    + R  + ++P  L +
Sbjct: 257  KVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLSY 316

Query: 941  AMQGRVLPRYRVLQVVKSTRLL----KKHPQLLDILGMSDEDFLDKFVHRFPDHVT-ELL 1000
             ++ RV+PR +VLQ+++   LL    KK   ++ I+ M++E FL+K+V RF D +  ELL
Sbjct: 317  NLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGDEIAEELL 376

Query: 1001 AAFRGQCM 1002
             A++  C+
Sbjct: 377  VAYKCVCL 380

[Close]

BLAST of Cp4.1LG14g01570.1 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 154.5 bits (389), Expect = 4.7e-37
Identity = 98/334 (29.34%), Postives = 173/334 (51.80%), Query Frame = 0


Query: 666 VQYLIDTFELSPARAVSIMSSRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAF 725
           + YLID+  LSP  A ++ S +  L+S E+P +V   L + GF+ A I S ++  P +  
Sbjct: 72  LNYLIDSCGLSPDSA-TVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLL 131

Query: 726 SNIERTLKPKIEFFQNLGLVGSDLGRFVSKHSTLLTISLEKRLMPSVEILKSVFPKDECN 785
           +N E  L PK+ FF ++G+  S L R ++   T+LT SL  +L+PS   LKSV   DE  
Sbjct: 132 ANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDE-- 191

Query: 786 SDLLQVMQRCSDMLMRSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDI 845
             ++  ++R + + +      L+ NINY+   G+    + +LL   P     +  + + I
Sbjct: 192 -KIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAI 251

Query: 846 VSMVVETGFSTNTKMFVHGLHSISSVSN-ATFKKKVGLICSFGITEKECMRMFTSAPGLI 905
                E GF+     FV  +H++S   N + + K   +   +G +E + M  F   P  +
Sbjct: 252 AKQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCM 311

Query: 906 RTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSTRLLKKHP 965
             S  K+ R +E+F+NE  ++   I + P  L  +++ R++PR  V +V+ S  L+K+  
Sbjct: 312 MLSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDW 371

Query: 966 QLLDILGMSDEDFLDKFVHRFPDHVTELLAAFRG 999
            L  +L   ++ FL+K V ++ + + EL+  + G
Sbjct: 372 SLTSLLVPVEKVFLEKLVIKYEEELPELMNLYLG 401

[Close]

BLAST of Cp4.1LG14g01570.1 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 141.0 bits (354), Expect = 5.4e-33
Identity = 93/347 (26.80%), Postives = 166/347 (47.84%), Query Frame = 0


Query: 651 SSSSHSQASASYGIVVQYLIDTFELSPARAVSIMSSRRGLESTEKPQSVYKYLSELGFSK 710
           S +   Q        V YL+D+  LS   A S  S    L S++KP SV     + GF+ 
Sbjct: 44  SENLEKQKPCLESFTVSYLVDSCGLSLESAKS-NSRFVKLVSSKKPDSVLALFKDHGFTN 103

Query: 711 AHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLVGSDLGRFVSKHSTLLTISLEKRLMP 770
             I S I+  P++   + E  + PK+ FF ++G   SD  + +S    +L+ SL KRL+P
Sbjct: 104 DQITSVIKSFPRVLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIP 163

Query: 771 SVEILKSVFPKDECNSDLLQVMQRCSDMLMRSPYTRLLVNINYLQSCGIVGSQLSMLLKR 830
             + LKS+  ++E     L+   RC  + +    +   + ++  +  G+    +  L++ 
Sbjct: 164 CYDSLKSILVEEESVVKCLKRGIRCFSLKITHCVS---LRVSICRELGVPDKSIKWLVQA 223

Query: 831 QPALFGMRESQVRDIVSMVVETGFSTNTKMFVHGLHSISSVSNATFKKKVGLICSFGITE 890
            P  F  RE +  ++++ V   GF      FVH + +    S +  ++K  L   FG ++
Sbjct: 224 SPFTFFSRERRFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSK 283

Query: 891 KECMRMFTSAPGLIRTSVGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRYRV 950
           ++ +      P  +  S  K+   LE+ +N   +   DIV +P  L  +M+ R+ PR +V
Sbjct: 284 EDFVAAIMRFPNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQV 343

Query: 951 LQVVKSTRLLKKHP-QLLDILGMSDEDFLDKFVHRFPDHVTELLAAF 997
           + ++ S  L+KK       IL +   +F+DKFV ++ D + +L+  F
Sbjct: 344 ISLLLSKGLVKKEDINYFTILKLKSSEFMDKFVLKYQDEMPQLVQPF 386

[Close]

BLAST of Cp4.1LG14g01570.1 vs. TAIR 10
Match: AT1G61970.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 98.2 bits (243), Expect = 4.0e-20
Identity = 96/393 (24.43%), Postives = 168/393 (42.75%), Query Frame = 0


Query: 649 FFSSSSHSQASASYG-----IVVQYLIDTFELSPARAVSIMSSRRGLESTEKPQSVYKYL 708
           FFSS+S +  S   G       V YL+D+  L+   A SI S +   E    P SV   L
Sbjct: 33  FFSSASAACLSPRVGRKGNNFTVSYLVDSLGLTTKLAESI-SRKVSFEDKNNPDSVLNLL 92

Query: 709 SELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLVGSDLGRFVSKHSTLLTIS 768
           +  GF+ + I + IR  PQ+  ++ E++L PK++F Q+ G   S++   VS    +L   
Sbjct: 93  TSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKK 152

Query: 769 LEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLMRSPYTRLLVNINYLQSCGIVGSQ 828
             K +    + +K    +    ++ L         L +      + N++ L+  G+    
Sbjct: 153 GHKTISVYYDFIKDTLLEKSSKNEKL------CHSLPQGNLENKIRNVSVLRELGMPHKL 212

Query: 829 L-SMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKMFVHGLHSISSVSNATFKKKVGL 888
           L S+L+     + G  + +  + +  VVE GF   T  FV  L  I  ++  T ++KV L
Sbjct: 213 LFSLLISDSQPVCG--KEKFEETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHL 272

Query: 889 ICSFG------------------ITEK-----------------ECMRMFTSAPGLIRTS 948
             S G                  ++EK                 E  +M    P  I  S
Sbjct: 273 YKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLS 332

Query: 949 VGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSTRLLKKH-PQL 998
              +K+  EF + +       +V  P    ++++ R++PR  V++ + S  L++   P +
Sbjct: 333 TETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSI 392

[Close]

BLAST of Cp4.1LG14g01570.1 vs. TAIR 10
Match: AT1G61970.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 98.2 bits (243), Expect = 4.0e-20
Identity = 96/393 (24.43%), Postives = 168/393 (42.75%), Query Frame = 0


Query: 649 FFSSSSHSQASASYG-----IVVQYLIDTFELSPARAVSIMSSRRGLESTEKPQSVYKYL 708
           FFSS+S +  S   G       V YL+D+  L+   A SI S +   E    P SV   L
Sbjct: 33  FFSSASAACLSPRVGRKGNNFTVSYLVDSLGLTTKLAESI-SRKVSFEDKNNPDSVLNLL 92

Query: 709 SELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQNLGLVGSDLGRFVSKHSTLLTIS 768
           +  GF+ + I + IR  PQ+  ++ E++L PK++F Q+ G   S++   VS    +L   
Sbjct: 93  TSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKK 152

Query: 769 LEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLMRSPYTRLLVNINYLQSCGIVGSQ 828
             K +    + +K    +    ++ L         L +      + N++ L+  G+    
Sbjct: 153 GHKTISVYYDFIKDTLLEKSSKNEKL------CHSLPQGNLENKIRNVSVLRELGMPHKL 212

Query: 829 L-SMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKMFVHGLHSISSVSNATFKKKVGL 888
           L S+L+     + G  + +  + +  VVE GF   T  FV  L  I  ++  T ++KV L
Sbjct: 213 LFSLLISDSQPVCG--KEKFEETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHL 272

Query: 889 ICSFG------------------ITEK-----------------ECMRMFTSAPGLIRTS 948
             S G                  ++EK                 E  +M    P  I  S
Sbjct: 273 YKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLS 332

Query: 949 VGKLKRGLEFFMNEAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSTRLLKKH-PQL 998
              +K+  EF + +       +V  P    ++++ R++PR  V++ + S  L++   P +
Sbjct: 333 TETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSI 392

The following BLAST results are available for this feature:

BLAST of Cp4.1LG14g01570.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FK23	1.3e-10	20.78	Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana O...	[more]
F4JVI3	1.1e-09	23.34	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9ZT96	5.5e-06	16.47	Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana O...	[more]
F4IHL3	7.9e-05	24.41	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9SZL6	2.3e-04	26.06	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]

BLAST of Cp4.1LG14g01570.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023552363.1	9.60e-265	100.00	transcription termination factor MTEF1, chloroplastic-like [Cucurbita pepo subsp...	[more]
XP_022929189.1	3.11e-257	97.41	uncharacterized protein LOC111435860 [Cucurbita moschata]	[more]
KAG7015351.1	6.01e-253	95.60	Transcription termination factor MTERF8, chloroplastic, partial [Cucurbita argyr...	[more]
XP_023552360.1	8.98e-250	94.56	uncharacterized protein LOC111810052 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_022929526.1	2.55e-249	94.30	uncharacterized protein LOC111436067 [Cucurbita moschata]	[more]

BLAST of Cp4.1LG14g01570.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EN21	1.50e-257	97.41	uncharacterized protein LOC111435860 OS=Cucurbita moschata OX=3662 GN=LOC1114358...	[more]
A0A6J1END2	1.24e-249	94.30	uncharacterized protein LOC111436067 OS=Cucurbita moschata OX=3662 GN=LOC1114360...	[more]
A0A6J1JB80	3.51e-249	94.30	uncharacterized protein LOC111482884 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1J5Y4	1.03e-244	94.49	uncharacterized protein LOC111482884 isoform X4 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1C8W1	3.80e-187	74.09	uncharacterized protein LOC111008506 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Cp4.1LG14g01570.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64950.1	2.6e-67	40.49	Mitochondrial transcription termination factor family protein	[more]
AT5G07900.1	4.7e-37	29.34	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	5.4e-33	26.80	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.1	4.0e-20	24.43	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.2	4.0e-20	24.43	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 894..925 e-value: 51.0 score: 12.7 coord: 200..230 e-value: 12.0 score: 14.8 coord: 89..120 e-value: 0.65 score: 19.0 coord: 269..300 e-value: 53.0 score: 12.7 coord: 926..957 e-value: 470.0 score: 6.4 coord: 165..195 e-value: 1300.0 score: 2.9 coord: 492..522 e-value: 2800.0 score: 0.5 coord: 383..415 e-value: 6.6 score: 15.7 coord: 559..590 e-value: 260.0 score: 8.4 coord: 789..820 e-value: 110.0 score: 11.2 coord: 750..782 e-value: 4.6 score: 16.2 coord: 714..745 e-value: 0.65 score: 19.0 coord: 354..378 e-value: 800.0 score: 4.6 coord: 859..889 e-value: 2500.0 score: 0.7 coord: 458..488 e-value: 12.0 score: 14.8 coord: 527..558 e-value: 53.0 score: 12.7 coord: 825..855 e-value: 3.6 score: 16.6 coord: 423..453 e-value: 1300.0 score: 2.9 coord: 125..157 e-value: 6.6 score: 15.7 coord: 234..264 e-value: 2800.0 score: 0.5 coord: 301..332 e-value: 260.0 score: 8.4
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 787..880 e-value: 7.0E-6 score: 25.2 coord: 184..353 e-value: 7.7E-20 score: 71.0 coord: 76..232 e-value: 2.1E-14 score: 53.2 coord: 701..857 e-value: 1.9E-15 score: 56.6 coord: 364..515 e-value: 3.0E-9 score: 36.2 coord: 870..978 e-value: 4.7E-14 score: 52.0 coord: 442..611 e-value: 9.2E-20 score: 70.8
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 651..998 coord: 26..360 coord: 364..625
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 158..363 e-value: 6.8E-34 score: 119.2 coord: 416..628 e-value: 5.8E-34 score: 119.4 coord: 785..990 e-value: 1.1E-37 score: 131.6 coord: 676..784 e-value: 6.5E-19 score: 70.1
None	No IPR available	PANTHER	PTHR13068:SF173	EMB\|CAB62602.1	coord: 651..998 coord: 26..360 coord: 364..625

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG14g01570	Cp4.1LG14g01570	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG14g01570.1:exon:003	Cp4.1LG14g01570.1:exon:003	exon
Cp4.1LG14g01570.1:exon:002	Cp4.1LG14g01570.1:exon:002	exon
Cp4.1LG14g01570.1:exon:001	Cp4.1LG14g01570.1:exon:001	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG14g01570.1:cds:003	Cp4.1LG14g01570.1:cds:003	CDS
Cp4.1LG14g01570.1:cds:002	Cp4.1LG14g01570.1:cds:002	CDS
Cp4.1LG14g01570.1:cds:001	Cp4.1LG14g01570.1:cds:001	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG14g01570.1	Cp4.1LG14g01570.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006353	DNA-templated transcription, termination
molecular_function	GO:0003690	double-stranded DNA binding