Cp4.1LG13g03940.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTCACCAACCCTAACTTAACTTAATTATGATCCAGGCTAACACCATATCTATGTACAACTTTCGTTATGTACAAGCACTAGCTCATTAGTTCCACTTTAATATTCACTTAATCTAAGTCCACCGCTAGCAAATATTGTCGGCTTTTGATCGTTACAGTTTTAAAAACGCGTCTATGGGTAGAAGTTTCCACACCCTTTTGAAAAATGATTCGTTATCTTCTTCAATCAATGTGGGATCTCACAATTCACTGTTCTTGGGGGTTAACGCCTTCGCTGACACACCGTCTAGTGTCTGATTCTGATACCATTTGTAATAACCTAAGTCACCGTTAGTAGATATTATTCATTTTGGCTCGTTATGCATAATCGTCAAGCTCACGATTTTTAAAACACGTCCAATAAGAAGAGTTTTTACGTTCTTGTAAATAACTACTGATAAAACTAAAAATTGAAATAAGTTAAAGGGCAGACTTGGAAATGGCAATCAACAGTCTCTCCATTTTTTTTTTCTAGTGAAATTATGAACAATTTTACCTTAAAATCAACAACATTTTTCCTTATACTCCAAGAGCCCCCAATGGCGTCTTCCCCTGTCCAGCTTCAAAGTAGAAGATGAGCATCGCTAACATGGCGAGCCTAGCATGCTTGATCTCAGCCAACTTCAATCTCTCCAATTTCTCCGTGTCTGGAATGTAAACCCCATCTTTAATAGTTCCGGCAAATCCCAACGGATCGAAGAATTTTCCGCCGGGATAACCCTGTTCTCCCGTTGCGTTTGCGAAGTTCTCTGCCGTCCTCGACCATGGCGTCGCCCATTCCACCGATTGAGACTCTGGGTTGAAGAAATCCACCCACCGCTTGCTCTCCACCCATCCCATTAGTAGAAGCTGGGTTCCCAGCAGTGATCCAAAGGAGAATGGAGCAATTGCGCCTGGATCGGCTCCGGCTTCGAACCATGGGATCCCACTCCAGGCTTGGCCTACGAAGATTCCGACCACCGCTGCCATTGCCCAACGGCCGTGGATCAGCTCTGCTTCTCTGTACCATTTCAGAAATGCAGGGTCCTTCCCCAACCCTAATGGGTCGAAGCCGAAGTCACCTGGAAGTCTACGCAAACGGAACAAGTAATTGCTTAGGAGGTGTTCGATGAAATGCCTCAATCAGATTTTAGACAGTAACTAAAAAAAGTGCAACTAGAAGAAAGTAAGCGAGAGACATACGAGCCATCTAGCCATTCTGGGTCGACTAAGTTGCCTCCGCCCTTAACAGCAGGGATCCAAGACTTCTTGGGCTGAGCAGCGGCGACGATGACAAGCTTGCGAGAGCCAACGACATTGACACCGCCTCTGGCTCCAGCCAGCAAGGTCTGAGTTCTGCTACCTCCATGGAGGAAGGGTGAGCCCAACCCATTAAGCACAGCACCAGAAGTTGCAGCCATGGCAGGTGATATGGGAACTTTCAGGTATGAATCGAAAACTATGTCTTATTATTTGATCAGAAGGGTCTGTGGAAGATATTGTGAATTGAATTGTGGGTTTAAATGGAGTGATGTATGAATTATGATGATGAGAATCTGGAGGGGAAATCTAAAGGAGGGTGTTGGATAGATTTCTGACCAATGAGAAACAAGTTCTTCATCCGCTCCTCCACCTGGCCGCTTACCACGTTAGCCTCTTTTCAGCCTCATGTTTCACTCCCAATTTCCTGCTGCTATAGAACATAAATCCTTTTTGGCCCCACCTCTTCTTGTTCGGATATGTAACCTCATGCCTAGTAAAAATAGGGGGTAGAGATATATTTGATAGACATTTATATATGGTAATCTGAAACCATATATATATATATACACCTTAGTCCGTGCTTTGAATATGTATTTTCTGGATTTAGCCAACTTATTCTTTGTGTTCATCTAGATCAAGTGTGTGAATGTGTGCGTTGTTGTGCAATCCTAACACTTCTTCGCGTGAAAAAACTATGAATATTAATTTTTATAATAGTTGAGAGAATTCTGCCCCTCCCTATAAAATTTTAGGTTGCTCTAAACAGAAATCCCATGGATGAAAGCCAACGTAAGACACAACCTTAAAACGGCAAGGAAAAACAGAGAGTTGTAACTCCCGACCTTATTTCATCACAAAAAAACTGCCCAATTCACTAAATAAAGAACCCAAAAACTGCTCTCTCTCTCTATATATATATAATTAAGAAGAGCCCAAAACGAAGAAGGCAAAGGTGAAGCAAACCCAGCAAGAAAAATGGCTGCTACTTCTCCGGCCAACATTTTCATACTTGCAGGGCAGAGCAACATGGCAGGCCGAGGCGGCGTCTCCAAAGACCCAACCACAGACAAAAACGTGTGGGATGGTTATATCCCCCCAGAATCTCAACCCAACCAATCCATCTTTCGGTTCACTGCTGATATGGTCTGGGAGCAAGCCCATGAGCCACTCCATTGGGACATAGACGTTGTAAAGACCAATGGGGTTGGACCCGGCATGCCTTTTGCCAATGAGCTTTTGGCCAAAGCAGGCCCGAGCATCGGCACCATCGGTCTGGTTCCGTGTGCCATTGGAGGATCTCACTTGAGAGAATGGGTTAAAGGGACTGATAGGTACACCAAATTGGTTGAACGGATGAAACGTTCGGAAGAACATGGGGGCAAAGTTAAGGGATTCTTTTGGTACCAAGGAGAGTCCGATGCGGCGGTGGAAGAAGAAGCTAAGTCGTACGAGAGAGAGCTGAGTAAATTCTTCACGGACTTGCGTGCAGACATGAACCATCCAGATCTACCCATCATCCTGGTTCGTCATATCTAAACTTAAATCAAAACATATGATATGTTGTGCTGAAATTTGTGTTCTTAAAAACTGCAGGTGAAGATAGTGACCCATGATTTCTTCATAAGCCCAGATTTTGAGTTCAAAGAAGAGGTATGGAATGCTCAGGAGGCAGTCACGCAGAAGCTACCAAATGTAAGAATGGTGGACGGTAGGGTGGCGGTGGGGAACTTTGATGAAGGGCTTAACGAAGATAGAGGTCATCTCAACGTCAAATCTGAAGTGAATTTGGGCAAAATGTTTGCTCATTCCTATTATTCAAACTTCGCTCACTTCATTTCCTAATTAATTTGCCTATCAACAAATGATACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AATTCACCAACCCTAACTTAACTTAATTATGATCCAGGCTAACACCATATCTATGTACAACTTTCGTTATGTACAAGCACTAGCTCATTAGTTCCACTTTAATATTCACTTAATCTAAGTCCACCGCTAGCAAATATTGTCGGCTTTTGATCGTTACAGTTTTAAAAACGCGTCTATGGGTAGAAGTTTCCACACCCTTTTGAAAAATGATTCGTTATCTTCTTCAATCAATGTGGGATCTCACAATTCACTGTTCTTGGGGGTTAACGCCTTCGCTGACACACCGTCTAGTGTCTGATTCTGATACCATTTGTAATAACCTAAGTCACCGTTAGTAGATATTATTCATTTTGGCTCGTTATGCATAATCGTCAAGCTCACGATTTTTAAAACACGTCCAATAAGAAGAGTTTTTACGTTCTTGTAAATAACTACTGATAAAACTAAAAATTGAAATAAGTTAAAGGGCAGACTTGGAAATGGCAATCAACAGTCTCTCCATTTTTTTTTTCTAGTGAAATTATGAACAATTTTACCTTAAAATCAACAACATTTTTCCTTATACTCCAAGAGCCCCCAATGGCGTCTTCCCCTGTCCAGCTTCAAAGTAGAAGATGAGCATCGCTAACATGGCGAGCCTAGCATGCTTGATCTCAGCCAACTTCAATCTCTCCAATTTCTCCGTGTCTGGAATGTAAACCCCATCTTTAATAGTTCCGGCAAATCCCAACGGATCGAAGAATTTTCCGCCGGGATAACCCTGTTCTCCCGTTGCGTTTGCGAAGTTCTCTGCCGTCCTCGACCATGGCGTCGCCCATTCCACCGATTGAGACTCTGGGTTGAAGAAATCCACCCACCGCTTGCTCTCCACCCATCCCATTAGTAGAAGCTGGGTTCCCAGCAGTGATCCAAAGGAGAATGGAGCAATTGCGCCTGGATCGGCTCCGGCTTCGAACCATGGGATCCCACTCCAGGCTTGGCCTACGAAGATTCCGACCACCGCTGCCATTGCCCAACGGCCGTGGATCAGCTCTGCTTCTCTGTACCATTTCAGAAATGCAGGGTCCTTCCCCAACCCTAATGGGTCGAAGCCGAAGTCACCTGGAAGTCTACGCAAACGGAACAAGTAATTGCTTAGGAGGTGTTCGATGAAATGCCTCAATCAGATTTTAGACAGTAACTAAAAAAAGTGCAACTAGAAGAAAGTAAGCGAGAGACATACGAGCCATCTAGCCATTCTGGGTCGACTAAGTTGCCTCCGCCCTTAACAGCAGGGATCCAAGACTTCTTGGGCTGAGCAGCGGCGACGATGACAAGCTTGCGAGAGCCAACGACATTGACACCGCCTCTGGCTCCAGCCAGCAAGGTCTGAGTTCTGCTACCTCCATGGAGGAAGGGTGAGCCCAACCCATTAAGCACAGCACCAGAAGTTGCAGCCATGGCAGGTGATATGGGAACTTTCAGGTATGAATCGAAAACTATGTCTTATTATTTGATCAGAAGGGTCTGTGGAAGATATTGTGAATTGAATTGTGGGTTTAAATGGAGTGATGTATGAATTATGATGATGAGAATCTGGAGGGGAAATCTAAAGGAGGGTGTTGGATAGATTTCTGACCAATGAGAAACAAGTTCTTCATCCGCTCCTCCACCTGGCCGCTTACCACGTTAGCCTCTTTTCAGCCTCATGTTTCACTCCCAATTTCCTGCTGCTATAGAACATAAATCCTTTTTGGCCCCACCTCTTCTTGTTCGGATATGTAACCTCATGCCTAGTAAAAATAGGGGGTAGAGATATATTTGATAGACATTTATATATGGTAATCTGAAACCATATATATATATATACACCTTAGTCCGTGCTTTGAATATGTATTTTCTGGATTTAGCCAACTTATTCTTTGTGTTCATCTAGATCAAGTGTGTGAATGTGTGCGTTGTTGTGCAATCCTAACACTTCTTCGCGTGAAAAAACTATGAATATTAATTTTTATAATAGTTGAGAGAATTCTGCCCCTCCCTATAAAATTTTAGGTTGCTCTAAACAGAAATCCCATGGATGAAAGCCAACGTAAGACACAACCTTAAAACGGCAAGGAAAAACAGAGAGTTGTAACTCCCGACCTTATTTCATCACAAAAAAACTGCCCAATTCACTAAATAAAGAACCCAAAAACTGCTCTCTCTCTCTATATATATATAATTAAGAAGAGCCCAAAACGAAGAAGGCAAAGGTGAAGCAAACCCAGCAAGAAAAATGGCTGCTACTTCTCCGGCCAACATTTTCATACTTGCAGGGCAGAGCAACATGGCAGGCCGAGGCGGCGTCTCCAAAGACCCAACCACAGACAAAAACGTGTGGGATGGTTATATCCCCCCAGAATCTCAACCCAACCAATCCATCTTTCGGTTCACTGCTGATATGGTCTGGGAGCAAGCCCATGAGCCACTCCATTGGGACATAGACGTTGTAAAGACCAATGGGGTTGGACCCGGCATGCCTTTTGCCAATGAGCTTTTGGCCAAAGCAGGCCCGAGCATCGGCACCATCGGTCTGGTTCCGTGTGCCATTGGAGGATCTCACTTGAGAGAATGGGTTAAAGGGACTGATAGGTACACCAAATTGGTTGAACGGATGAAACGTTCGGAAGAACATGGGGGCAAAGTTAAGGGATTCTTTTGGTACCAAGGAGAGTCCGATGCGGCGGTGGAAGAAGAAGCTAAGTCGTACGAGAGAGAGCTGAGTAAATTCTTCACGGACTTGCGTGCAGACATGAACCATCCAGATCTACCCATCATCCTGGTGAAGATAGTGACCCATGATTTCTTCATAAGCCCAGATTTTGAGTTCAAAGAAGAGGTATGGAATGCTCAGGAGGCAGTCACGCAGAAGCTACCAAATGTAAGAATGGTGGACGGTAGGGTGGCGGTGGGGAACTTTGATGAAGGGCTTAACGAAGATAGAGGTCATCTCAACGTCAAATCTGAAGTGAATTTGGGCAAAATGTTTGCTCATTCCTATTATTCAAACTTCGCTCACTTCATTTCCTAATTAATTTGCCTATCAACAAATGATACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA ATGGCTGCTACTTCTCCGGCCAACATTTTCATACTTGCAGGGCAGAGCAACATGGCAGGCCGAGGCGGCGTCTCCAAAGACCCAACCACAGACAAAAACGTGTGGGATGGTTATATCCCCCCAGAATCTCAACCCAACCAATCCATCTTTCGGTTCACTGCTGATATGGTCTGGGAGCAAGCCCATGAGCCACTCCATTGGGACATAGACGTTGTAAAGACCAATGGGGTTGGACCCGGCATGCCTTTTGCCAATGAGCTTTTGGCCAAAGCAGGCCCGAGCATCGGCACCATCGGTCTGGTTCCGTGTGCCATTGGAGGATCTCACTTGAGAGAATGGGTTAAAGGGACTGATAGGTACACCAAATTGGTTGAACGGATGAAACGTTCGGAAGAACATGGGGGCAAAGTTAAGGGATTCTTTTGGTACCAAGGAGAGTCCGATGCGGCGGTGGAAGAAGAAGCTAAGTCGTACGAGAGAGAGCTGAGTAAATTCTTCACGGACTTGCGTGCAGACATGAACCATCCAGATCTACCCATCATCCTGGTGAAGATAGTGACCCATGATTTCTTCATAAGCCCAGATTTTGAGTTCAAAGAAGAGGTATGGAATGCTCAGGAGGCAGTCACGCAGAAGCTACCAAATGTAAGAATGGTGGACGGTAGGGTGGCGGTGGGGAACTTTGATGAAGGGCTTAACGAAGATAGAGGTCATCTCAACGTCAAATCTGAAGTGAATTTGGGCAAAATGTTTGCTCATTCCTATTATTCAAACTTCGCTCACTTCATTTCCTAA MAATSPANIFILAGQSNMAGRGGVSKDPTTDKNVWDGYIPPESQPNQSIFRFTADMVWEQAHEPLHWDIDVVKTNGVGPGMPFANELLAKAGPSIGTIGLVPCAIGGSHLREWVKGTDRYTKLVERMKRSEEHGGKVKGFFWYQGESDAAVEEEAKSYERELSKFFTDLRADMNHPDLPIILVKIVTHDFFISPDFEFKEEVWNAQEAVTQKLPNVRMVDGRVAVGNFDEGLNEDRGHLNVKSEVNLGKMFAHSYYSNFAHFIS Homology
BLAST of Cp4.1LG13g03940.1 vs. ExPASy Swiss-Prot
Match: Q8L9J9 (Probable carbohydrate esterase At4g34215 OS=Arabidopsis thaliana OX=3702 GN=At4g34215 PE=1 SV=2) HSP 1 Score: 209.1 bits (531), Expect = 5.9e-53 Identity = 114/254 (44.88%), Postives = 151/254 (59.45%), Query Frame = 0
BLAST of Cp4.1LG13g03940.1 vs. NCBI nr
Match: XP_023550941.1 (probable carbohydrate esterase At4g34215 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 545 bits (1405), Expect = 5.89e-196 Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0
BLAST of Cp4.1LG13g03940.1 vs. NCBI nr
Match: KAG7016422.1 (putative carbohydrate esterase, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 542 bits (1397), Expect = 9.77e-195 Identity = 263/264 (99.62%), Postives = 263/264 (99.62%), Query Frame = 0
BLAST of Cp4.1LG13g03940.1 vs. NCBI nr
Match: KAG6578894.1 (putative carbohydrate esterase, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 541 bits (1394), Expect = 2.80e-194 Identity = 262/264 (99.24%), Postives = 263/264 (99.62%), Query Frame = 0
BLAST of Cp4.1LG13g03940.1 vs. NCBI nr
Match: XP_022939276.1 (probable carbohydrate esterase At4g34215 [Cucurbita moschata]) HSP 1 Score: 540 bits (1391), Expect = 8.04e-194 Identity = 261/264 (98.86%), Postives = 263/264 (99.62%), Query Frame = 0
BLAST of Cp4.1LG13g03940.1 vs. NCBI nr
Match: XP_022993914.1 (probable carbohydrate esterase At4g34215 [Cucurbita maxima]) HSP 1 Score: 540 bits (1390), Expect = 1.14e-193 Identity = 261/264 (98.86%), Postives = 263/264 (99.62%), Query Frame = 0
BLAST of Cp4.1LG13g03940.1 vs. ExPASy TrEMBL
Match: A0A6J1FFF9 (probable carbohydrate esterase At4g34215 OS=Cucurbita moschata OX=3662 GN=LOC111445241 PE=4 SV=1) HSP 1 Score: 540 bits (1391), Expect = 3.89e-194 Identity = 261/264 (98.86%), Postives = 263/264 (99.62%), Query Frame = 0
BLAST of Cp4.1LG13g03940.1 vs. ExPASy TrEMBL
Match: A0A6J1K1G7 (probable carbohydrate esterase At4g34215 OS=Cucurbita maxima OX=3661 GN=LOC111489769 PE=4 SV=1) HSP 1 Score: 540 bits (1390), Expect = 5.53e-194 Identity = 261/264 (98.86%), Postives = 263/264 (99.62%), Query Frame = 0
BLAST of Cp4.1LG13g03940.1 vs. ExPASy TrEMBL
Match: A0A5D3CGI9 (Putative carbohydrate esterase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold874G00750 PE=4 SV=1) HSP 1 Score: 436 bits (1122), Expect = 5.37e-153 Identity = 210/260 (80.77%), Postives = 226/260 (86.92%), Query Frame = 0
BLAST of Cp4.1LG13g03940.1 vs. ExPASy TrEMBL
Match: A0A1S3B3Y0 (probable carbohydrate esterase At4g34215 OS=Cucumis melo OX=3656 GN=LOC103485730 PE=4 SV=1) HSP 1 Score: 436 bits (1122), Expect = 5.37e-153 Identity = 210/260 (80.77%), Postives = 226/260 (86.92%), Query Frame = 0
BLAST of Cp4.1LG13g03940.1 vs. ExPASy TrEMBL
Match: A0A0A0K9J9 (SASA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G058180 PE=4 SV=1) HSP 1 Score: 430 bits (1106), Expect = 1.47e-150 Identity = 207/260 (79.62%), Postives = 226/260 (86.92%), Query Frame = 0
BLAST of Cp4.1LG13g03940.1 vs. TAIR 10
Match: AT4G34215.1 (Domain of unknown function (DUF303) ) HSP 1 Score: 209.1 bits (531), Expect = 4.2e-54 Identity = 114/254 (44.88%), Postives = 151/254 (59.45%), Query Frame = 0
BLAST of Cp4.1LG13g03940.1 vs. TAIR 10
Match: AT4G34215.2 (Domain of unknown function (DUF303) ) HSP 1 Score: 209.1 bits (531), Expect = 4.2e-54 Identity = 114/254 (44.88%), Postives = 151/254 (59.45%), Query Frame = 0
BLAST of Cp4.1LG13g03940.1 vs. TAIR 10
Match: AT3G53010.1 (Domain of unknown function (DUF303) ) HSP 1 Score: 207.2 bits (526), Expect = 1.6e-53 Identity = 123/271 (45.39%), Postives = 155/271 (57.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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