Cp4.1LG12g10600.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG12g10600.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	vacuolar protein sorting-associated protein 2 homolog 3-like
Location	Cp4.1LG12: 9261094 .. 9267736 (-)
Sequence length	1306
RNA-Seq Expression	Cp4.1LG12g10600.1
Synteny	Cp4.1LG12g10600.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCCCTTTCTTCTTCCACCTGCGTTCCTTTGCAGAAATTCGTCGAACTTCATCTTGGTTCTGCTCACGATCGTTCTTTGGACGCCATGAATATCTTTTCGAAGAAACCTACCGCCAAAGGTCGTCACCAATTGCTGCCGTTTGTTTTTCTTAATCGATTTCGTTCATTTGATGATTCTTTTTTCTAAATTTGTAGCGGAAACTTGTTCATCTGTTTCTGCATTGCTCTCAGTTCCTCCTTTTTGCTTTGATATTTTTGTTCTGGGTTGCTTTGATTCGGTTGTTCTTTATGTGATTAAACTTGTTTCGATTACAGAAGCTCTTCGGGAGAGTAAAAGGGAAATGACGCGCTCTACGAGAGGTATCTTATTGATGTTTCTTAAGTGCACTTAATTAGTAAGGGATTCATCTGGTTTCAAAGTCATGATTGCGCTTATGTCTCGAGTAATTAAATTTATTCATGTTTCTCATCATATTTGTGTATATTGCAACTCGTCCATATGCTCATGATGATGTTTATTTTGGACTGAATGGAGCAAAGAAGCATGTAATTTATGATTGCATATGGTACTAGCGAGAACCACTTACCCCCAACCGGTTTCCTCACAGAGAAAAGGAGATGAAAATTTGGGCTTGAACTTAGAGTTTGCTTGTGAGATCCCACGTTGGTTAGGGAGGAGAATGAAACATTCTTTACAAGGGTGTGGAAACCTCTCCAAGCAGACGCGTTTTAAAAATCTTGAGGGGAAGCTTGAAAGGGAAAGCCCAAAAAGGACAGTATTTGCTGGCGGTGGGCTTGGACTGTTACAAATGGTATAAGAGCTAGACATCGGGCTATGTGCCAGCGAGGAGGTTGAGCCCTGAAGGGGGGTGGAGTGTGAGATCCCACATCGGTTGAGAGGAGAACAAAGCATTCTTTATAAGAGTGTAGAAACCTCTCCCTAACAGACATGTTTTAAAAACCTTGAGGGGAAGCCCGAAAGGGAAAACCCAAAGAGGATAATATCTATAGCGGTGGGCTTGGGCTGTTACAAATGGTATCAAAGTCAGACACCGGGCAATGTGCTACGAGGAGACTAAGCCCCGAAGGTGGGTGGATTGTGATATCCCACATCAGTTGGGGAGGAGAATGAAGCATTCTTTATAAGAGTGTGAAAACCTCTCCCTAGCAGATGTGTTTTAAAAACCTTGAGGGGAAGCCCGAAAGGGAAAGCTCAAAGAGGACAATATCGGATAGCGGTGAATTTGGGTTCTTACACTCAATATGCCATACCAATAATGCTATGGCTTCAATATGCCATACCAATAATGGTATGGCTTTGAGTTGGGATAAGATGGTACTAATGTTTTGGGATTACATTTTGCAATTGTTTTCAGAATAGAATGATATTCTGTGGTTATGTTTCTCGACACTTCTTGAAGTTAAGAATGCCATTTCCTTACCTTGAATTGATATTCCTTTGCACGTAACTACGTTGTTTAATTCCTTATACTATTTTTTGTAAAGTGTCACTTCCTTAGATGTTTTTGTTTCATTTTCATACTATAATAATTGTTCTTTTCTCTTTTCTTTGTGATATCACTGAGTGGTCTCATCTTTTTGCCACTTTTTCTCAGGTATAGAGAAGGAAATTGGGGCATTGCAATTAGAAGTACGTGAAGAGCTTCTAAACATGGGTTTAATCTAAATATTCTGTGTTTTAACTGTGATTTGGTTTATAATCTTATCAGGAAAAGAAGCTGGTCGCTGAGATAAAGAGAACTGCCAAAACAGGAAACGAGGTACATTTCATATTCTCGACCAGATTGTATCGGTCCTAGTCCTACGGAGGGTTGATTCTTTTTGAAAAATTCTTCTTCTGGGGTCGAGCATTAATTATGTTTATCATCATCCATTCGATTCTTCAGGCAGCGACGAAGATTCTTGCTCGGCAGTTAGTTAGGCTCAGGCAACAAATAGCAAAATTACAAGGTAGTCGAGCTCAAATGAGAGGCATAGCAACTCACACACAGGTTAAGTCAAGTGCCTAATTCTTCTCTTCTTACTTGGTTGAGTATTTTTGCAGTAAGATGTATGATCTTCTCTTTGGTGTTGTAACAACCCAAGCCCACCGTTGGCAGATATCGTCCTCTTTGGACTTTCCTTTTCGAGTTTCTCCTCAAGGTTTTTAAAACGCGTCTGCTAGGGAAAGGTTTCTATATCCTGGTAAAGAATGTTTCGTTCTCCTCTCCAATCGATGTGGGATCTCACAATCCACCCTCCCCCCTTCGGGGCCAGCATCCTCGCTGATACACCACCTCGTGTCCACCCCCTTCAGGGCTCAGCCTCCTCTTTAGCACATCGCTCGGAACCTGGCTCTGATACCATTTGTAACAGCCCAACCTTACTGCTAGTAGATATTGTCCTCTTTGGGCATTCCCTATCGGGTTTCCCCTCAAGGTTTTTAAAACCTCTCTTTTAGGGAGAGGTTTCCACACCCTTATAAAGAATGTTTCGTTCTTCTCTCCAACCGATGTGGGATCTCACAATCCACCCCCTTTGGAACCCAGCGTCCTCGCTAGCACACTGCCTCTTGTCCACCCCACTTCGGGGTTCAGCCTCCTCGCTGGTACATCGCCCAGAACCTGACTTTGATACCATTTGTAACAGCCTAAGCCCACCGCTAGCAGATACTGTCTTCTTTGCACTTTCCCTTTCGGGCTTCCGCTCAAGGTTATTAAAATGCGTCCGCGAGTGAGAGGTTTCTATATCCTTGTAAAAAATGTTTCGTTCTCCTCTCCAACTAACATGGGATCTCACAATTCACCCCCCTTCGGGGCCCAACGTCTTCGCTGGCACACCGCCTCGTGTTCACCCCCCTTTGGGGCTCAGCCTCTTCGTTGGCACATTGCCCAGAACCTGGCTTGGATACCATTTGTAACAGCCCAAGCCCACTGCCACTGTCCTCTTTGGGTTTTTCCTTTCCGGCTTCCCTTCAAAGTTTTTAAAACGCGTTTGCTAGGGAGAGGTNAGTGCACTTAATTAGTAAGGGATTCATCTGGTTTCAAAGTCATGATTGCGCTTATGTCTCGAGTAATTAAATTTATTCATGTTTCTCATCATATTTGTGTATATTGCAACTCGTCCATATGCTCATGATGATGTTTATTTTGGACTGAATGGAGCAAAGAAGCATGTAATTTATGATTGCATATGGTACTAGCGAGAACCACTTACCCCCAACCGGTTTCCTCACAGAGAAAAGGAGAAGAAAATTTGGGCTTGAACTTAGAGTTTGCTTGTGAGATCCCACCTTGGTTAGGGAGGAGAATGAAACATTCTTTACAAGGGTGTGGANACCACTTACCCCCAACCGGTTTCCTCACAGAGAAAAGGAGATGAAAATTTGGGCTTGAACTTAGAGTTTGCTTGTGAGATCCCACGTTGGTTAGGGAGGAGAATGAAACATTCTTTACAAGGGTGTGGANAGCACACTGCCTCGTGTTCACCCCCCTTTGGGGCTCAGCCTCTTCGTTGGCACATTGCCCGGAACCTGGCTTGGATACCATTTGTAACAGCTCAAGCCCACCGCCACTGTCCTCTTTGGGTTTTCCCTTTCCGACTTCCCTTCAAAGTTTTTAAAACGCGTTTGCTAGGGAGAGGTTNAAGCAGACGCGTTTTAAAAATCTTGAGGGGAAGCTTGAAAGGGAAAGCCCAAAAAGGACAGTATTTGCTGGCGGTGGGCTTGGACTGTTACAAATGGTATAAGAGCTAGACATCGGGCTATGTGCCAGCGAGGAGGTTGAGCCCTGAAGGGGGGTGGAGTGTGAGATCCCACATCGGTTGAGAGGAGAACAAAGCATTCTTTATAAGAGTGTAGAAACCTCTCCCTAACAGACATGTTTTAAAAACCTTGAGGGGAAGCCCGAAAGGGAAAACCCAAAGAGGATAATATCTATAGCGGTGGGCTTGGGCTGTTACAAATGGTATCAAAGTCNATATTATTAATAGCATCTCCCCACATTTTACAGGCAATGCATGCTCAGACTTCTGTTGCCGCTGGCATGAAGAGTGCCAGTAAAGCAATGTCAGCTATGAATAAGGTAAGAAAATATGGACATCGATCAACCCTTACATATGTTTGAAATTGCTGTGGTTAACGAACAGAATAGTAGCCATGCTTTCGAAGCATAATGATTATTGTTCACCCGTATCTTTTTCTGTTGTTTTCGATTATTTTATACTCTCAATCATGTGTCCGACACACTTTTCAAAAACAAAAAGCTTTAATATTATATACCCACTTCATATTCTGTGAGAGCTTAAAGTTTTATGTTTTTTTAAAATCTTATACATAATTCTTACCATGTTCATCTGTAGCAAATGAATCCCGTGAAGCAAGCAAAGGTCATTAGAGAATTTCAGAAGCAGTCTGCACAGATGGATATGACTGTAAGATTCTACTCTAACCTATATTCTTCCATATATTCTTACAGGAAGAAAAGCTCTTGAATTTGCTAGCTTTGTTTATTTTGTGTTTTCCATCTGTGCCTCCCTGTATATGCTTACCCTTTTTTGCTTCCTTTCGGTTGAAATGAACGTACCTGACTATATTTGGTGCATCAGAATTTGTAACAGCCCCAGCCCATTGCTAACAGATATTGTCCTCTTTGGACTTTTTCTTTTGGATTTCTCTTCAAGGTTTTTTAAAACGTGTCTGCTAGTGAGAGGTTTCCACACCCTTATAAGGAATGTTTTGTTCCCCTCTCCAACCGATTTGGGATCTTACAATCCACCCTCCTTGGGGGCCCAGCGTCCTCGTAGGCACATTGCCCAGTGTCTAGCTCTGATACCATTTCAAGTCCACCGCTGTGTCCACTTTGGCTTGTTACGTATCGCTGTCAGCCTTACAGTTTTAAAACGCGTCTACTAGGAAGAGGTTTCCACACCCTTATAACGAATGCTCTGTTCCCTTCTCCAACTGACATGGAATCTCACCAGAAATATAAATTCAAATGCAATAGAAATCTTACTTCACAACCTCAGTTTTGATATTTGTCATTTCCGTGTTATGTTTCAATATTTCTGGATGCTTACTGTCTTCGTTGGTGGCAGACGGAGATGATTTCAGATGCTATAGATGATGCACTGGATGATGATGAGGCAGAAGAAGAAACTGAAGATCTAACGAATCAAGTAAGCTCCTTTAACTGCCTTCATTTATTTCCTCCTTTCTTTACTCCAGTTGTAGTCAAAAAGTTAGCTTAAAATTGTTTCTTGTAATAGCCACTAATTTGCTACTCTGGCCTGTACCTATTGCTTTGTGATTGTGTTCATCGAGTTTAAAGTCATAAGCCCGAGTTTCAGAGGTCCAAGTATCAACCATTGTTAACATTTCTCCATGAAACTTATGTGATACTAGCTGTGCTAAATTTTAGGACCTCAATCTTCTTTTAGATATCAGATTTCATGACCTATGATTTGCTCAAATAATAATTGAACGCAATAGGCGCTACCCCCTCCCCCAACCTTACTTGAACAGGATCTGTTCTATAGATTGTACTACTGTGACCCCTGCTTCCTTCTGCTCGACAGGTGCTCGATGAAATCGGTGTTGATATTGCCTCACAGGTATGTTAAAATTGGTTTTACATCTTTTTAAAGTCTTGTAAACTGGATTGCATATACTAGAACTGATTGGATCATGTGTATGTTATTTGATTCAGCTTTCAACAGCCCCAAAAGGAAGAATTGCATCAAAGAATACTGAGGGTGTCAGTAGGTATGTAATGTATATATTTCCCATGAATATTCATCTTCTTACATAAATCAAAAGAAAATTTATTGGTTTTAATTTGAAATAGAATAAGTTTTTGATCCTCTTTCCAGTTTTCTGACTTAAATTACTTGTGAGATCATGCTTTGGTTGCATAAAGGTAGTAGCTGAATTAAGATCATGAGCAATTAGGACATGAAAGGATCATGGCGTTTTTTTGGTTCTTCCTTTCAAATAATGGCTATTTTGTTGCTAATATTTTGCAGTTCGAGTATCGAGGAGCTCGAAAAGCGATTGGCTGCTCTTCATAATCCTTGAACATTATGATAAATTCCCTTGATTTCCAATTGAGATGAACACGATTTCGACTAGGATCATCTATTGTACATATAAACTCTCTCTCTCTCTCATCACAATTGAGGCACAAATGTTTATTATCTTCTTGAGATAATGGAATCTTATTGACCATTTGCTTGTATCCTTAGATTAATTTAGATCCTAATTCAAATTGAAGGATGCTAAGACTACTCTTTAAAACCCATTTCAAACACACTGGAAGTGTTTGTTAATTACTAAACAAATATATGCTTTGGGTAAACAAAAGAACTAACAAGCATGGGAGTTAGCCTCCTTACTGAGAATATTTACAAAAACTAAGGAGAAGCATATTATAAATTACAGGAAACACTTGATAGTATTTTCTAATTGTAAGGCAACATTCCATCAGTGATACACAAATCCTTCCTCAGGTCTCAAGCATGGGATTGAAGAAGCTCTACAACAGTGTAGTGTACATTTCTTGGCATTCTACAGATTTCAACTTGTCAAACTACGCTTCTATGATTCCCGATATTTGGTTAGGTCGAAGGTCAACGTTCTCGAGCAGCT

mRNA sequence

CCCCCTTTCTTCTTCCACCTGCGTTCCTTTGCAGAAATTCGTCGAACTTCATCTTGGTTCTGCTCACGATCGTTCTTTGGACGCCATGAATATCTTTTCGAAGAAACCTACCGCCAAAGCGGAAACTTGTTCATCTGTTTCTGCATTGCTCTCAGTTCCTCCTTTTTGCTTTGATATTTTTGTTCTGGGTTGCTTTGATTCGGTTGTTCTTTATGTGATTAAACTTGTTTCGATTACAGAAGCTCTTCGGGAGAGTAAAAGGGAAATGACGCGCTCTACGAGAGGTATAGAGAAGGAAATTGGGGCATTGCAATTAGAAGAAAAGAAGCTGGTCGCTGAGATAAAGAGAACTGCCAAAACAGGAAACGAGGCAGCGACGAAGATTCTTGCTCGGCAGTTAGTTAGGCTCAGGCAACAAATAGCAAAATTACAAGGTAGTCGAGCTCAAATGAGAGGCATAGCAACTCACACACAGCAAATGAATCCCGTGAAGCAAGCAAAGGTCATTAGAGAATTTCAGAAGCAGTCTGCACAGATGGATATGACTACGGAGATGATTTCAGATGCTATAGATGATGCACTGGATGATGATGAGGCAGAAGAAGAAACTGAAGATCTAACGAATCAACTTTCAACAGCCCCAAAAGGAAGAATTGCATCAAAGAATACTGAGGGTGTCAGTAGTTCGAGTATCGAGGAGCTCGAAAAGCGATTGGCTGCTCTTCATAATCCTTGAACATTATGATAAATTCCCTTGATTTCCAATTGAGATGAACACGATTTCGACTAGGATCATCTATTGTACATATAAACTCTCTCTCTCTCTCATCACAATTGAGGCACAAATGTTTATTATCTTCTTGAGATAATGGAATCTTATTGACCATTTGCTTGTATCCTTAGATTAATTTAGATCCTAATTCAAATTGAAGGATGCTAAGACTACTCTTTAAAACCCATTTCAAACACACTGGAAGTGTTTGTTAATTACTAAACAAATATATGCTTTGGGTAAACAAAAGAACTAACAAGCATGGGAGTTAGCCTCCTTACTGAGAATATTTACAAAAACTAAGGAGAAGCATATTATAAATTACAGGAAACACTTGATAGTATTTTCTAATTGTAAGGCAACATTCCATCAGTGATACACAAATCCTTCCTCAGGTCTCAAGCATGGGATTGAAGAAGCTCTACAACAGTGTAGTGTACATTTCTTGGCATTCTACAGATTTCAACTTGTCAAACTACGCTTCTATGATTCCCGATATTTGGTTAGGTCGAAGGTCAACGTTCTCGAGCAGCT

Coding sequence (CDS)

ATGAATATCTTTTCGAAGAAACCTACCGCCAAAGCGGAAACTTGTTCATCTGTTTCTGCATTGCTCTCAGTTCCTCCTTTTTGCTTTGATATTTTTGTTCTGGGTTGCTTTGATTCGGTTGTTCTTTATGTGATTAAACTTGTTTCGATTACAGAAGCTCTTCGGGAGAGTAAAAGGGAAATGACGCGCTCTACGAGAGGTATAGAGAAGGAAATTGGGGCATTGCAATTAGAAGAAAAGAAGCTGGTCGCTGAGATAAAGAGAACTGCCAAAACAGGAAACGAGGCAGCGACGAAGATTCTTGCTCGGCAGTTAGTTAGGCTCAGGCAACAAATAGCAAAATTACAAGGTAGTCGAGCTCAAATGAGAGGCATAGCAACTCACACACAGCAAATGAATCCCGTGAAGCAAGCAAAGGTCATTAGAGAATTTCAGAAGCAGTCTGCACAGATGGATATGACTACGGAGATGATTTCAGATGCTATAGATGATGCACTGGATGATGATGAGGCAGAAGAAGAAACTGAAGATCTAACGAATCAACTTTCAACAGCCCCAAAAGGAAGAATTGCATCAAAGAATACTGAGGGTGTCAGTAGTTCGAGTATCGAGGAGCTCGAAAAGCGATTGGCTGCTCTTCATAATCCTTGA

Protein sequence

MNIFSKKPTAKAETCSSVSALLSVPPFCFDIFVLGCFDSVVLYVIKLVSITEALRESKREMTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQIAKLQGSRAQMRGIATHTQQMNPVKQAKVIREFQKQSAQMDMTTEMISDAIDDALDDDEAEEETEDLTNQLSTAPKGRIASKNTEGVSSSSIEELEKRLAALHNP

Homology

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BLAST of Cp4.1LG12g10600.1 vs. ExPASy Swiss-Prot
Match: Q941D5 (Vacuolar protein sorting-associated protein 2 homolog 3 OS=Arabidopsis thaliana OX=3702 GN=VPS2.3 PE=2 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.6e-56
Identity = 134/198 (67.68%), Postives = 148/198 (74.75%), Query Frame = 0


Query: 52  EALRESKREMTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQ 111
           E LRESKREMT++TRGIEKEIG+LQ EEKKLV EIKRTAK+GNE ATKILARQL+RLRQQ
Sbjct: 12  EVLRESKREMTQATRGIEKEIGSLQSEEKKLVLEIKRTAKSGNEGATKILARQLIRLRQQ 71

Query: 112 IAKLQGSRAQMRGIATHTQ------------------------QMNPVKQAKVIREFQKQ 171
           IA LQGSRAQMRGIATHTQ                         M+P KQAKV+REFQKQ
Sbjct: 72  IANLQGSRAQMRGIATHTQAMHAHTSVAAGMQGATKAMAAMSKNMDPAKQAKVMREFQKQ 131

Query: 172 SAQMDMTTEMISDAIDDALDDDEAEEETEDLTN------------QLSTAPKGRIASKNT 214
           SAQMDMTTEM+SD+IDDALD+DEAE+ETEDLTN            QLS+APKG+I  K  
Sbjct: 132 SAQMDMTTEMMSDSIDDALDNDEAEDETEDLTNQVLDEIGIDIASQLSSAPKGKIGGKKA 191

[Close]

BLAST of Cp4.1LG12g10600.1 vs. ExPASy Swiss-Prot
Match: Q0WTY4 (Vacuolar protein sorting-associated protein 2 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=VPS2.2 PE=1 SV=2)

HSP 1 Score: 194.5 bits (493), Expect = 1.2e-48
Identity = 124/208 (59.62%), Postives = 144/208 (69.23%), Query Frame = 0


Query: 52  EALRESKREMTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQ 111
           +ALR SKREM  +TRGIE+EI +LQLEEK+LVAEIK+TAKTGNEAATKILARQLVRLRQQ
Sbjct: 12  DALRTSKREMAVATRGIEREITSLQLEEKRLVAEIKKTAKTGNEAATKILARQLVRLRQQ 71

Query: 112 IAKLQGSRAQMRGIATHTQ------------------------QMNPVKQAKVIREFQKQ 171
           I  LQGSRAQ+RG+ THTQ                        QM P KQAKVI++FQKQ
Sbjct: 72  ITNLQGSRAQIRGVTTHTQALYASTSISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQ 131

Query: 172 SAQMDMTTEMISDAIDDALDDDEAEEETEDLTN------------QLSTAPKGRIASK-- 214
           SAQ+DMT EM+S+AID+ LD DEAEEETEDLTN            QLS+APKGRIA+K  
Sbjct: 132 SAQLDMTIEMMSEAIDETLDKDEAEEETEDLTNQVLDEIGVGVASQLSSAPKGRIATKTA 191

[Close]

BLAST of Cp4.1LG12g10600.1 vs. ExPASy Swiss-Prot
Match: Q9SKI2 (Vacuolar protein sorting-associated protein 2 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=VPS2.1 PE=1 SV=2)

HSP 1 Score: 101.3 bits (251), Expect = 1.4e-20
Identity = 68/176 (38.64%), Postives = 99/176 (56.25%), Query Frame = 0


Query: 52  EALRESKREMTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQ 111
           E LRE+KR + +S R IE+E   LQ +EKKL+ EIK+TAK G   A K++A+ L+R R Q
Sbjct: 14  ELLRENKRMLDKSIREIERERQGLQTQEKKLINEIKKTAKQGQMGAVKVMAKDLIRTRHQ 73

Query: 112 IAKLQGSRAQMRGIATHTQ------------------------QMNPVKQAKVIREFQKQ 171
           I K    ++Q++G++   Q                        QMN     K+++EF++Q
Sbjct: 74  IEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQ 133

Query: 172 SAQMDMTTEMISDAIDDALDDDEAEEETEDLTNQ------------LSTAPKGRIA 192
           + +M+M +E++ DAIDDAL+ DE EEETEDL +Q            L  AP G +A
Sbjct: 134 NEKMEMVSEVMGDAIDDALEGDEEEEETEDLVSQVLDEIGIDINQELVNAPSGAVA 189

[Close]

BLAST of Cp4.1LG12g10600.1 vs. ExPASy Swiss-Prot
Match: Q5F3A2 (Charged multivesicular body protein 2b OS=Gallus gallus OX=9031 GN=CHMP2B PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 9.5e-17
Identity = 67/208 (32.21%), Postives = 115/208 (55.29%), Query Frame = 0


Query: 44  VIKLVSITEALRESKREMTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILAR 103
           + K  ++ + ++E  RE+  + R I ++  AL+ +E++L  EIK+ AKTGN+ A K+LA+
Sbjct: 4   LFKKKTVDDIIKEQNRELRGTQRTITRDRAALEKQERQLELEIKKMAKTGNKEACKVLAK 63

Query: 104 QLVRLRQQ----------------IAKLQGSRAQMRGIATHT--------QQMNPVKQAK 163
           QLV+LR+Q                  K+  S+ +M G  + T        ++M+P K  +
Sbjct: 64  QLVQLRKQKNRTYAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQ 123

Query: 164 VIREFQKQSAQMDMTTEMISDAIDDALDDDEAEEETEDLTNQ------------LSTAPK 214
            ++ FQK++ +M+MT EMI+D +DD  D  + EEE++D+ NQ            ++ AP 
Sbjct: 124 TMQNFQKENMKMEMTEEMINDTLDDIFDASDEEEESQDIVNQVLDEIGIEISGKMAKAPS 183

[Close]

BLAST of Cp4.1LG12g10600.1 vs. ExPASy Swiss-Prot
Match: Q66IV6 (Charged multivesicular body protein 2b-B OS=Xenopus laevis OX=8355 GN=chmp2b-b PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.2e-16
Identity = 67/208 (32.21%), Postives = 112/208 (53.85%), Query Frame = 0


Query: 44  VIKLVSITEALRESKREMTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILAR 103
           + K  ++ + +RE  +E+  + R I ++  AL+ +EK+L  EIK+ AKTGN+ A ++LA+
Sbjct: 4   LFKKKTVDDIIREQNKELRGTQRAITRDRAALEKQEKQLEMEIKKMAKTGNKDACRVLAK 63

Query: 104 QLVRLRQQ----------------IAKLQGSRAQMRGIATHT--------QQMNPVKQAK 163
           QLV+LR+Q                  K+  S+ +M G  + T        ++M+P K  +
Sbjct: 64  QLVQLRKQKTRTYAVSSKVTSMSTQTKVMSSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQ 123

Query: 164 VIREFQKQSAQMDMTTEMISDAIDDALDDDEAEEETEDLTNQ------------LSTAPK 214
            ++ FQK++ +M+MT EMI+D +DD  D  E EEE++D+ NQ            ++ AP 
Sbjct: 124 TMQNFQKENMKMEMTDEMINDTLDDIFDASEDEEESQDIVNQVLDEIGIEISGKMAKAPS 183

[Close]

BLAST of Cp4.1LG12g10600.1 vs. NCBI nr
Match: XP_022991664.1 (vacuolar protein sorting-associated protein 2 homolog 3-like [Cucurbita maxima])

HSP 1 Score: 274 bits (701), Expect = 2.41e-90
Identity = 176/252 (69.84%), Postives = 176/252 (69.84%), Query Frame = 0


Query: 1   MNIFSKKPTAKAETCSSVSALLSVPPFCFDIFVLGCFDSVVLYVIKLVSITEALRESKRE 60
           MNIFSKKPTAK                                        EALRESKRE
Sbjct: 1   MNIFSKKPTAK----------------------------------------EALRESKRE 60

Query: 61  MTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQIAKLQGSRA 120
           MTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQIAKLQGSRA
Sbjct: 61  MTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQIAKLQGSRA 120

Query: 121 QMRGIATHTQ------------------------QMNPVKQAKVIREFQKQSAQMDMTTE 180
           QMRGIATHTQ                        QMNPVKQAKVIREFQKQSAQMDMTTE
Sbjct: 121 QMRGIATHTQAMHAQTSVAAGMKSASTAMSAMNKQMNPVKQAKVIREFQKQSAQMDMTTE 180

Query: 181 MISDAIDDALDDDEAEEETEDLTNQ------------LSTAPKGRIASKNTEGVSSSSIE 216
           MISDAIDDALDDDEAEEETEDLTNQ            LSTAPKGRIASKNTEGVSSSSIE
Sbjct: 181 MISDAIDDALDDDEAEEETEDLTNQVLDEIGVDIASQLSTAPKGRIASKNTEGVSSSSIE 212

[Close]

BLAST of Cp4.1LG12g10600.1 vs. NCBI nr
Match: XP_023549260.1 (vacuolar protein sorting-associated protein 2 homolog 3-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023549261.1 vacuolar protein sorting-associated protein 2 homolog 3-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023549262.1 vacuolar protein sorting-associated protein 2 homolog 3-like isoform X3 [Cucurbita pepo subsp. pepo] >XP_023549263.1 vacuolar protein sorting-associated protein 2 homolog 3-like isoform X4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 274 bits (701), Expect = 2.41e-90
Identity = 176/252 (69.84%), Postives = 176/252 (69.84%), Query Frame = 0


Query: 1   MNIFSKKPTAKAETCSSVSALLSVPPFCFDIFVLGCFDSVVLYVIKLVSITEALRESKRE 60
           MNIFSKKPTAK                                        EALRESKRE
Sbjct: 1   MNIFSKKPTAK----------------------------------------EALRESKRE 60

Query: 61  MTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQIAKLQGSRA 120
           MTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQIAKLQGSRA
Sbjct: 61  MTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQIAKLQGSRA 120

Query: 121 QMRGIATHTQ------------------------QMNPVKQAKVIREFQKQSAQMDMTTE 180
           QMRGIATHTQ                        QMNPVKQAKVIREFQKQSAQMDMTTE
Sbjct: 121 QMRGIATHTQAMHAQTSVAAGMKSASKAMSAMNKQMNPVKQAKVIREFQKQSAQMDMTTE 180

Query: 181 MISDAIDDALDDDEAEEETEDLTNQ------------LSTAPKGRIASKNTEGVSSSSIE 216
           MISDAIDDALDDDEAEEETEDLTNQ            LSTAPKGRIASKNTEGVSSSSIE
Sbjct: 181 MISDAIDDALDDDEAEEETEDLTNQVLDEIGVDIASQLSTAPKGRIASKNTEGVSSSSIE 212

[Close]

BLAST of Cp4.1LG12g10600.1 vs. NCBI nr
Match: KAG6576028.1 (Vacuolar protein sorting-associated protein 2-like 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 274 bits (701), Expect = 1.74e-89
Identity = 176/252 (69.84%), Postives = 176/252 (69.84%), Query Frame = 0


Query: 1   MNIFSKKPTAKAETCSSVSALLSVPPFCFDIFVLGCFDSVVLYVIKLVSITEALRESKRE 60
           MNIFSKKPTAK                                        EALRESKRE
Sbjct: 60  MNIFSKKPTAK----------------------------------------EALRESKRE 119

Query: 61  MTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQIAKLQGSRA 120
           MTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQIAKLQGSRA
Sbjct: 120 MTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQIAKLQGSRA 179

Query: 121 QMRGIATHTQ------------------------QMNPVKQAKVIREFQKQSAQMDMTTE 180
           QMRGIATHTQ                        QMNPVKQAKVIREFQKQSAQMDMTTE
Sbjct: 180 QMRGIATHTQAMHAQTSVAAGMKSASKAMSAMNKQMNPVKQAKVIREFQKQSAQMDMTTE 239

Query: 181 MISDAIDDALDDDEAEEETEDLTNQ------------LSTAPKGRIASKNTEGVSSSSIE 216
           MISDAIDDALDDDEAEEETEDLTNQ            LSTAPKGRIASKNTEGVSSSSIE
Sbjct: 240 MISDAIDDALDDDEAEEETEDLTNQVLDEIGVDIASQLSTAPKGRIASKNTEGVSSSSIE 271

[Close]

BLAST of Cp4.1LG12g10600.1 vs. NCBI nr
Match: XP_022953389.1 (vacuolar protein sorting-associated protein 2 homolog 3-like [Cucurbita moschata] >KAG7014549.1 Vacuolar protein sorting-associated protein 2-like 3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 273 bits (697), Expect = 7.05e-89
Identity = 175/252 (69.44%), Postives = 176/252 (69.84%), Query Frame = 0


Query: 1   MNIFSKKPTAKAETCSSVSALLSVPPFCFDIFVLGCFDSVVLYVIKLVSITEALRESKRE 60
           MNIFSKKPTAK                                        EALRESKRE
Sbjct: 60  MNIFSKKPTAK----------------------------------------EALRESKRE 119

Query: 61  MTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQIAKLQGSRA 120
           MTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQIAKLQGSRA
Sbjct: 120 MTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQIAKLQGSRA 179

Query: 121 QMRGIATHTQ------------------------QMNPVKQAKVIREFQKQSAQMDMTTE 180
           QMRGIATHTQ                        QMNPVKQAKVIREFQKQSAQ+DMTTE
Sbjct: 180 QMRGIATHTQAMHAQTSVAAGMKSASKAMSAMNKQMNPVKQAKVIREFQKQSAQIDMTTE 239

Query: 181 MISDAIDDALDDDEAEEETEDLTNQ------------LSTAPKGRIASKNTEGVSSSSIE 216
           MISDAIDDALDDDEAEEETEDLTNQ            LSTAPKGRIASKNTEGVSSSSIE
Sbjct: 240 MISDAIDDALDDDEAEEETEDLTNQVLDEIGVDIASQLSTAPKGRIASKNTEGVSSSSIE 271

[Close]

BLAST of Cp4.1LG12g10600.1 vs. NCBI nr
Match: XP_008447230.1 (PREDICTED: vacuolar protein sorting-associated protein 2 homolog 3 [Cucumis melo] >XP_038896097.1 vacuolar protein sorting-associated protein 2 homolog 3 [Benincasa hispida])

HSP 1 Score: 266 bits (681), Expect = 2.66e-87
Identity = 172/252 (68.25%), Postives = 173/252 (68.65%), Query Frame = 0


Query: 1   MNIFSKKPTAKAETCSSVSALLSVPPFCFDIFVLGCFDSVVLYVIKLVSITEALRESKRE 60
           MNIFSKKPTAK                                        EALRESKRE
Sbjct: 1   MNIFSKKPTAK----------------------------------------EALRESKRE 60

Query: 61  MTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQIAKLQGSRA 120
           MTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQIA LQGSRA
Sbjct: 61  MTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQIANLQGSRA 120

Query: 121 QMRGIATHTQ------------------------QMNPVKQAKVIREFQKQSAQMDMTTE 180
           QMRGIATHTQ                        QMNPVKQAKVIREFQKQSAQMDMTTE
Sbjct: 121 QMRGIATHTQAMHAQTSVAAGMKSASKAMSAMNKQMNPVKQAKVIREFQKQSAQMDMTTE 180

Query: 181 MISDAIDDALDDDEAEEETEDLTNQ------------LSTAPKGRIASKNTEGVSSSSIE 216
           MISDAIDDALDDDEAEEETEDLTNQ            LSTAPKGRIASKNTEGVSSS I+
Sbjct: 181 MISDAIDDALDDDEAEEETEDLTNQVLDEIGVDVASQLSTAPKGRIASKNTEGVSSSGID 212

[Close]

BLAST of Cp4.1LG12g10600.1 vs. ExPASy TrEMBL
Match: A0A6J1JVH0 (vacuolar protein sorting-associated protein 2 homolog 3-like OS=Cucurbita maxima OX=3661 GN=LOC111488210 PE=4 SV=1)

HSP 1 Score: 274 bits (701), Expect = 1.17e-90
Identity = 176/252 (69.84%), Postives = 176/252 (69.84%), Query Frame = 0


Query: 1   MNIFSKKPTAKAETCSSVSALLSVPPFCFDIFVLGCFDSVVLYVIKLVSITEALRESKRE 60
           MNIFSKKPTAK                                        EALRESKRE
Sbjct: 1   MNIFSKKPTAK----------------------------------------EALRESKRE 60

Query: 61  MTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQIAKLQGSRA 120
           MTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQIAKLQGSRA
Sbjct: 61  MTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQIAKLQGSRA 120

Query: 121 QMRGIATHTQ------------------------QMNPVKQAKVIREFQKQSAQMDMTTE 180
           QMRGIATHTQ                        QMNPVKQAKVIREFQKQSAQMDMTTE
Sbjct: 121 QMRGIATHTQAMHAQTSVAAGMKSASTAMSAMNKQMNPVKQAKVIREFQKQSAQMDMTTE 180

Query: 181 MISDAIDDALDDDEAEEETEDLTNQ------------LSTAPKGRIASKNTEGVSSSSIE 216
           MISDAIDDALDDDEAEEETEDLTNQ            LSTAPKGRIASKNTEGVSSSSIE
Sbjct: 181 MISDAIDDALDDDEAEEETEDLTNQVLDEIGVDIASQLSTAPKGRIASKNTEGVSSSSIE 212

[Close]

BLAST of Cp4.1LG12g10600.1 vs. ExPASy TrEMBL
Match: A0A6J1GPI2 (vacuolar protein sorting-associated protein 2 homolog 3-like OS=Cucurbita moschata OX=3662 GN=LOC111455957 PE=4 SV=1)

HSP 1 Score: 273 bits (697), Expect = 3.41e-89
Identity = 175/252 (69.44%), Postives = 176/252 (69.84%), Query Frame = 0


Query: 1   MNIFSKKPTAKAETCSSVSALLSVPPFCFDIFVLGCFDSVVLYVIKLVSITEALRESKRE 60
           MNIFSKKPTAK                                        EALRESKRE
Sbjct: 60  MNIFSKKPTAK----------------------------------------EALRESKRE 119

Query: 61  MTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQIAKLQGSRA 120
           MTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQIAKLQGSRA
Sbjct: 120 MTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQIAKLQGSRA 179

Query: 121 QMRGIATHTQ------------------------QMNPVKQAKVIREFQKQSAQMDMTTE 180
           QMRGIATHTQ                        QMNPVKQAKVIREFQKQSAQ+DMTTE
Sbjct: 180 QMRGIATHTQAMHAQTSVAAGMKSASKAMSAMNKQMNPVKQAKVIREFQKQSAQIDMTTE 239

Query: 181 MISDAIDDALDDDEAEEETEDLTNQ------------LSTAPKGRIASKNTEGVSSSSIE 216
           MISDAIDDALDDDEAEEETEDLTNQ            LSTAPKGRIASKNTEGVSSSSIE
Sbjct: 240 MISDAIDDALDDDEAEEETEDLTNQVLDEIGVDIASQLSTAPKGRIASKNTEGVSSSSIE 271

[Close]

BLAST of Cp4.1LG12g10600.1 vs. ExPASy TrEMBL
Match: A0A1S3BGD8 (vacuolar protein sorting-associated protein 2 homolog 3 OS=Cucumis melo OX=3656 GN=LOC103489723 PE=4 SV=1)

HSP 1 Score: 266 bits (681), Expect = 1.29e-87
Identity = 172/252 (68.25%), Postives = 173/252 (68.65%), Query Frame = 0


Query: 1   MNIFSKKPTAKAETCSSVSALLSVPPFCFDIFVLGCFDSVVLYVIKLVSITEALRESKRE 60
           MNIFSKKPTAK                                        EALRESKRE
Sbjct: 1   MNIFSKKPTAK----------------------------------------EALRESKRE 60

Query: 61  MTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQIAKLQGSRA 120
           MTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQIA LQGSRA
Sbjct: 61  MTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQIANLQGSRA 120

Query: 121 QMRGIATHTQ------------------------QMNPVKQAKVIREFQKQSAQMDMTTE 180
           QMRGIATHTQ                        QMNPVKQAKVIREFQKQSAQMDMTTE
Sbjct: 121 QMRGIATHTQAMHAQTSVAAGMKSASKAMSAMNKQMNPVKQAKVIREFQKQSAQMDMTTE 180

Query: 181 MISDAIDDALDDDEAEEETEDLTNQ------------LSTAPKGRIASKNTEGVSSSSIE 216
           MISDAIDDALDDDEAEEETEDLTNQ            LSTAPKGRIASKNTEGVSSS I+
Sbjct: 181 MISDAIDDALDDDEAEEETEDLTNQVLDEIGVDVASQLSTAPKGRIASKNTEGVSSSGID 212

[Close]

BLAST of Cp4.1LG12g10600.1 vs. ExPASy TrEMBL
Match: A0A0A0K5C0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G372290 PE=4 SV=1)

HSP 1 Score: 265 bits (677), Expect = 5.22e-87
Identity = 171/252 (67.86%), Postives = 172/252 (68.25%), Query Frame = 0


Query: 1   MNIFSKKPTAKAETCSSVSALLSVPPFCFDIFVLGCFDSVVLYVIKLVSITEALRESKRE 60
           MNIFSKKPTAK                                        EALRESKRE
Sbjct: 1   MNIFSKKPTAK----------------------------------------EALRESKRE 60

Query: 61  MTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQIAKLQGSRA 120
           MTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQIA LQGSRA
Sbjct: 61  MTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQIANLQGSRA 120

Query: 121 QMRGIATHTQ------------------------QMNPVKQAKVIREFQKQSAQMDMTTE 180
           QMRGIATHTQ                        QMNPVKQAKVIREFQKQSAQMDMTTE
Sbjct: 121 QMRGIATHTQAMHAQTSVAAGMKSASKAMSAMNKQMNPVKQAKVIREFQKQSAQMDMTTE 180

Query: 181 MISDAIDDALDDDEAEEETEDLTNQ------------LSTAPKGRIASKNTEGVSSSSIE 216
           MISDAIDDALDDDEAEEETEDLTNQ            LSTAPKGRIASKNTEGV SS I+
Sbjct: 181 MISDAIDDALDDDEAEEETEDLTNQVLDEIGVDVASQLSTAPKGRIASKNTEGVGSSGID 212

[Close]

BLAST of Cp4.1LG12g10600.1 vs. ExPASy TrEMBL
Match: A0A6J1DR44 (vacuolar protein sorting-associated protein 2 homolog 3 OS=Momordica charantia OX=3673 GN=LOC111023067 PE=4 SV=1)

HSP 1 Score: 264 bits (675), Expect = 1.05e-86
Identity = 171/252 (67.86%), Postives = 172/252 (68.25%), Query Frame = 0


Query: 1   MNIFSKKPTAKAETCSSVSALLSVPPFCFDIFVLGCFDSVVLYVIKLVSITEALRESKRE 60
           MNIFSKKPTAK                                        EALRESKRE
Sbjct: 1   MNIFSKKPTAK----------------------------------------EALRESKRE 60

Query: 61  MTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQIAKLQGSRA 120
           MTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQIA LQGSRA
Sbjct: 61  MTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQIANLQGSRA 120

Query: 121 QMRGIATHTQ------------------------QMNPVKQAKVIREFQKQSAQMDMTTE 180
           QMRGIATHTQ                        QMNPVKQAKVIREFQ QSAQMDMTTE
Sbjct: 121 QMRGIATHTQAMHAQTSVAAGMKSASKAMTAMNKQMNPVKQAKVIREFQMQSAQMDMTTE 180

Query: 181 MISDAIDDALDDDEAEEETEDLTNQ------------LSTAPKGRIASKNTEGVSSSSIE 216
           MISDAIDDALDDDEAEEETEDLTNQ            LSTAPKGRIASKNTEGVSSS I+
Sbjct: 181 MISDAIDDALDDDEAEEETEDLTNQVLDEIGVDIASQLSTAPKGRIASKNTEGVSSSGID 212

[Close]

BLAST of Cp4.1LG12g10600.1 vs. TAIR 10
Match: AT1G03950.1 (vacuolar protein sorting-associated protein 2.3 )

HSP 1 Score: 220.7 bits (561), Expect = 1.1e-57
Identity = 134/198 (67.68%), Postives = 148/198 (74.75%), Query Frame = 0


Query: 52  EALRESKREMTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQ 111
           E LRESKREMT++TRGIEKEIG+LQ EEKKLV EIKRTAK+GNE ATKILARQL+RLRQQ
Sbjct: 12  EVLRESKREMTQATRGIEKEIGSLQSEEKKLVLEIKRTAKSGNEGATKILARQLIRLRQQ 71

Query: 112 IAKLQGSRAQMRGIATHTQ------------------------QMNPVKQAKVIREFQKQ 171
           IA LQGSRAQMRGIATHTQ                         M+P KQAKV+REFQKQ
Sbjct: 72  IANLQGSRAQMRGIATHTQAMHAHTSVAAGMQGATKAMAAMSKNMDPAKQAKVMREFQKQ 131

Query: 172 SAQMDMTTEMISDAIDDALDDDEAEEETEDLTN------------QLSTAPKGRIASKNT 214
           SAQMDMTTEM+SD+IDDALD+DEAE+ETEDLTN            QLS+APKG+I  K  
Sbjct: 132 SAQMDMTTEMMSDSIDDALDNDEAEDETEDLTNQVLDEIGIDIASQLSSAPKGKIGGKKA 191

[Close]

BLAST of Cp4.1LG12g10600.1 vs. TAIR 10
Match: AT5G44560.1 (SNF7 family protein )

HSP 1 Score: 194.5 bits (493), Expect = 8.7e-50
Identity = 124/208 (59.62%), Postives = 144/208 (69.23%), Query Frame = 0


Query: 52  EALRESKREMTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQ 111
           +ALR SKREM  +TRGIE+EI +LQLEEK+LVAEIK+TAKTGNEAATKILARQLVRLRQQ
Sbjct: 12  DALRTSKREMAVATRGIEREITSLQLEEKRLVAEIKKTAKTGNEAATKILARQLVRLRQQ 71

Query: 112 IAKLQGSRAQMRGIATHTQ------------------------QMNPVKQAKVIREFQKQ 171
           I  LQGSRAQ+RG+ THTQ                        QM P KQAKVI++FQKQ
Sbjct: 72  ITNLQGSRAQIRGVTTHTQALYASTSISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQ 131

Query: 172 SAQMDMTTEMISDAIDDALDDDEAEEETEDLTN------------QLSTAPKGRIASK-- 214
           SAQ+DMT EM+S+AID+ LD DEAEEETEDLTN            QLS+APKGRIA+K  
Sbjct: 132 SAQLDMTIEMMSEAIDETLDKDEAEEETEDLTNQVLDEIGVGVASQLSSAPKGRIATKTA 191

[Close]

BLAST of Cp4.1LG12g10600.1 vs. TAIR 10
Match: AT5G44560.2 (SNF7 family protein )

HSP 1 Score: 182.2 bits (461), Expect = 4.5e-46
Identity = 117/199 (58.79%), Postives = 136/199 (68.34%), Query Frame = 0


Query: 61  MTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQIAKLQGSRA 120
           M  +TRGIE+EI +LQLEEK+LVAEIK+TAKTGNEAATKILARQLVRLRQQI  LQGSRA
Sbjct: 1   MAVATRGIEREITSLQLEEKRLVAEIKKTAKTGNEAATKILARQLVRLRQQITNLQGSRA 60

Query: 121 QMRGIATHTQ------------------------QMNPVKQAKVIREFQKQSAQMDMTTE 180
           Q+RG+ THTQ                        QM P KQAKVI++FQKQSAQ+DMT E
Sbjct: 61  QIRGVTTHTQALYASTSISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQSAQLDMTIE 120

Query: 181 MISDAIDDALDDDEAEEETEDLTN------------QLSTAPKGRIASK----------N 214
           M+S+AID+ LD DEAEEETEDLTN            QLS+APKGRIA+K           
Sbjct: 121 MMSEAIDETLDKDEAEEETEDLTNQVLDEIGVGVASQLSSAPKGRIATKTAAPPASTAAT 180

[Close]

BLAST of Cp4.1LG12g10600.1 vs. TAIR 10
Match: AT2G06530.1 (SNF7 family protein )

HSP 1 Score: 101.3 bits (251), Expect = 1.0e-21
Identity = 68/176 (38.64%), Postives = 99/176 (56.25%), Query Frame = 0


Query: 52  EALRESKREMTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQ 111
           E LRE+KR + +S R IE+E   LQ +EKKL+ EIK+TAK G   A K++A+ L+R R Q
Sbjct: 14  ELLRENKRMLDKSIREIERERQGLQTQEKKLINEIKKTAKQGQMGAVKVMAKDLIRTRHQ 73

Query: 112 IAKLQGSRAQMRGIATHTQ------------------------QMNPVKQAKVIREFQKQ 171
           I K    ++Q++G++   Q                        QMN     K+++EF++Q
Sbjct: 74  IEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQ 133

Query: 172 SAQMDMTTEMISDAIDDALDDDEAEEETEDLTNQ------------LSTAPKGRIA 192
           + +M+M +E++ DAIDDAL+ DE EEETEDL +Q            L  AP G +A
Sbjct: 134 NEKMEMVSEVMGDAIDDALEGDEEEEETEDLVSQVLDEIGIDINQELVNAPSGAVA 189

[Close]

BLAST of Cp4.1LG12g10600.1 vs. TAIR 10
Match: AT5G22950.1 (SNF7 family protein )

HSP 1 Score: 59.7 bits (143), Expect = 3.4e-09
Identity = 46/177 (25.99%), Postives = 89/177 (50.28%), Query Frame = 0


Query: 52  EALRESKREMTRSTRGIEKEIGALQLEEKKLVAEIKRTAKTGNEAATKILARQLVRLRQQ 111
           + LR+ +R++ +  R IE++I  +Q EE+ +   IK  AK  +  + K LA+++V  R+ 
Sbjct: 16  QLLRDWQRKLRQECRNIERQIRDIQKEERNVQKAIKEAAKRNDMVSAKALAKEIVSSRRT 75

Query: 112 IAKLQGSRAQMRGIATHTQQ------------------------MNPVKQAKVIREFQKQ 171
           + +L  ++AQM  I+ H  +                        M   + A  ++EF K+
Sbjct: 76  VNRLYENKAQMNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLMKAPQMAATMQEFSKE 135

Query: 172 SAQMDMTTEMISDAIDDALDDDEAEEETEDLTNQLSTAPKGRIASKNTEGVSSSSIE 205
             +  +  E +++AID+ALD ++ EEE ++  +++ TA  G  A++    V    I+
Sbjct: 136 MTKAGVIEEFVNEAIDNALDSEDMEEEIDEEVDKVLTAIAGETAAELPVAVRKERIK 192

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g10600.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q941D5	1.6e-56	67.68	Vacuolar protein sorting-associated protein 2 homolog 3 OS=Arabidopsis thaliana ...	[more]
Q0WTY4	1.2e-48	59.62	Vacuolar protein sorting-associated protein 2 homolog 2 OS=Arabidopsis thaliana ...	[more]
Q9SKI2	1.4e-20	38.64	Vacuolar protein sorting-associated protein 2 homolog 1 OS=Arabidopsis thaliana ...	[more]
Q5F3A2	9.5e-17	32.21	Charged multivesicular body protein 2b OS=Gallus gallus OX=9031 GN=CHMP2B PE=2 S...	[more]
Q66IV6	1.2e-16	32.21	Charged multivesicular body protein 2b-B OS=Xenopus laevis OX=8355 GN=chmp2b-b P...	[more]

BLAST of Cp4.1LG12g10600.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022991664.1	2.41e-90	69.84	vacuolar protein sorting-associated protein 2 homolog 3-like [Cucurbita maxima]	[more]
XP_023549260.1	2.41e-90	69.84	vacuolar protein sorting-associated protein 2 homolog 3-like isoform X1 [Cucurbi...	[more]
KAG6576028.1	1.74e-89	69.84	Vacuolar protein sorting-associated protein 2-like 3, partial [Cucurbita argyros...	[more]
XP_022953389.1	7.05e-89	69.44	vacuolar protein sorting-associated protein 2 homolog 3-like [Cucurbita moschata...	[more]
XP_008447230.1	2.66e-87	68.25	PREDICTED: vacuolar protein sorting-associated protein 2 homolog 3 [Cucumis melo...	[more]

BLAST of Cp4.1LG12g10600.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JVH0	1.17e-90	69.84	vacuolar protein sorting-associated protein 2 homolog 3-like OS=Cucurbita maxima...	[more]
A0A6J1GPI2	3.41e-89	69.44	vacuolar protein sorting-associated protein 2 homolog 3-like OS=Cucurbita moscha...	[more]
A0A1S3BGD8	1.29e-87	68.25	vacuolar protein sorting-associated protein 2 homolog 3 OS=Cucumis melo OX=3656 ...	[more]
A0A0A0K5C0	5.22e-87	67.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G372290 PE=4 SV=1	[more]
A0A6J1DR44	1.05e-86	67.86	vacuolar protein sorting-associated protein 2 homolog 3 OS=Momordica charantia O...	[more]

BLAST of Cp4.1LG12g10600.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G03950.1	1.1e-57	67.68	vacuolar protein sorting-associated protein 2.3	[more]
AT5G44560.1	8.7e-50	59.62	SNF7 family protein	[more]
AT5G44560.2	4.5e-46	58.79	SNF7 family protein	[more]
AT2G06530.1	1.0e-21	38.64	SNF7 family protein	[more]
AT5G22950.1	3.4e-09	25.99	SNF7 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005024	Snf7 family	PFAM	PF03357	Snf7	coord: 56..134 e-value: 3.7E-13 score: 49.4
None	No IPR available	GENE3D	6.10.140.1230		coord: 135..193 e-value: 1.4E-10 score: 43.3 coord: 48..134 e-value: 9.7E-26 score: 92.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..201
None	No IPR available	PANTHER	PTHR10476:SF40	VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2 HOMOLOG 3	coord: 49..133 coord: 130..215
None	No IPR available	PANTHER	PTHR10476	CHARGED MULTIVESICULAR BODY PROTEIN	coord: 49..133 coord: 130..215

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG12g10600	Cp4.1LG12g10600	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG12g10600.1:three_prime_utr:001	Cp4.1LG12g10600.1:three_prime_utr:001	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG12g10600.1:exon:009	Cp4.1LG12g10600.1:exon:009	exon
Cp4.1LG12g10600.1:exon:008	Cp4.1LG12g10600.1:exon:008	exon
Cp4.1LG12g10600.1:exon:007	Cp4.1LG12g10600.1:exon:007	exon
Cp4.1LG12g10600.1:exon:006	Cp4.1LG12g10600.1:exon:006	exon
Cp4.1LG12g10600.1:exon:005	Cp4.1LG12g10600.1:exon:005	exon
Cp4.1LG12g10600.1:exon:004	Cp4.1LG12g10600.1:exon:004	exon
Cp4.1LG12g10600.1:exon:003	Cp4.1LG12g10600.1:exon:003	exon
Cp4.1LG12g10600.1:exon:002	Cp4.1LG12g10600.1:exon:002	exon
Cp4.1LG12g10600.1:exon:001	Cp4.1LG12g10600.1:exon:001	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG12g10600.1:cds:009	Cp4.1LG12g10600.1:cds:009	CDS
Cp4.1LG12g10600.1:cds:008	Cp4.1LG12g10600.1:cds:008	CDS
Cp4.1LG12g10600.1:cds:007	Cp4.1LG12g10600.1:cds:007	CDS
Cp4.1LG12g10600.1:cds:006	Cp4.1LG12g10600.1:cds:006	CDS
Cp4.1LG12g10600.1:cds:005	Cp4.1LG12g10600.1:cds:005	CDS
Cp4.1LG12g10600.1:cds:004	Cp4.1LG12g10600.1:cds:004	CDS
Cp4.1LG12g10600.1:cds:003	Cp4.1LG12g10600.1:cds:003	CDS
Cp4.1LG12g10600.1:cds:002	Cp4.1LG12g10600.1:cds:002	CDS
Cp4.1LG12g10600.1:cds:001	Cp4.1LG12g10600.1:cds:001	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG12g10600.1:five_prime_utr:001	Cp4.1LG12g10600.1:five_prime_utr:001	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG12g10600.1	Cp4.1LG12g10600.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007034	vacuolar transport
biological_process	GO:0032509	endosome transport via multivesicular body sorting pathway
biological_process	GO:0045324	late endosome to vacuole transport
biological_process	GO:0015031	protein transport
cellular_component	GO:0000815	ESCRT III complex
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005771	multivesicular body