Cp4.1LG11g07710.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG11g07710.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	NAC domain-containing protein
Location	Cp4.1LG11: 6287183 .. 6290375 (+)
Sequence length	1300
RNA-Seq Expression	Cp4.1LG11g07710.1
Synteny	Cp4.1LG11g07710.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACAACCAATCGTCCTGAAAAGTTGAAATAATTGTAATAAAGTGTTTGTCTTCTCCAACTTCTTCATCATGTTCTAAGTTTCAAAGCTTTTAAGCTCTTAAAATTCTCTTTATTATTTCCCAATAACTCATATCTCTCTCTACAAAATGTTTGGAATTGAAGAAGTTATTGATGAACTAAATGGAGAAGAAGCTGATAATGCTAAGGAAAGGCATAGATTATTGCCACCAGGCTTTAGGTTTCACCCTACTGATGAAGAACTCATTGCCTTTTATCTTGCTTCAAAGGTCTTTAAACCTTCAAATTTTCATGGTGTCAATATTGCTGAAGTTGACCTCAATAGATGTGAGCCTTGGGAGCTTCCAGGTACTCGTAATTTCTTTACAATCTTCTCGCTCGGGATTCACTCTCGAATCGAAAGTATCATGTCGTGTAAGCTTACCCTATTGAAATAATCGTGAAAGTAATAATCGCATGAAACTCGTTTTCTAGGGTTTGTTTGGTTTGTGTTTCTGTTTGAGTCTGTGAGTCAATAAGCTTGACTTGTTTAAATCCGAACATTAAGCATCATGTTAGAATCGTGATATGTAGTAGCCGTGCATTGAGAAGTTATTGATCGTAGAGTATTTCTAAGAGAAGTTAGTGGAACATTTTTTAATATTTCTATGAGAATAATTGTCATGATTTTGTTGGTTTAAATAGTTGTACAATTTTTTTTGTGGGTGTTTTGTTCTACTTCGATGATTTGTTTTGGTGTACTTAGATCGATAGTGAATGATCAAGAAAGGAAAACCCAACGAGGACAATATCAGCTAGCGGTGGGCTTGAGCTGTTACAAACGGTATTAGAGCTAGACACCGGGTGGTGTACCAGCTAGGACACTGTGCCTCCAAGGGGGGTGGATTGTGAGATCCCACGTCGGTTGGAGAGGAGAACAAAACATTCCTTATAACGGGATGAAAACCACTCCCTAGTAAATGCGTTTTAAAAACATTGAAGAAAGTCGAGAAAAGACAATATCTGCTAGCAGTGGGCTTAGACTTCTTCAAAGATTCATTTTTAATGTGTTTTCAAATGAATTGTAGCGATTTTTTTTTTTCATTCGACCCAAAATCTTAGATTGATGAGTTATATGATCGAATATTCGATCATTAGTTCGTATAAATGATGATTATAATGATTTTGTTCTTCAGATGAGGCAAAGATGGGAGAGAAAGAATGGTATTTCTTCAGCTTAAGAGTGAGGAAGTATCCGACAGGATTAAGAACCAACAGAGCCACAGTGGCTGGTTACTGGAAAGCCACAGGGAAAGACAGGCAAATTCACAGTAGTTCCAATGGAGTGAAGCTTGGAACAAAGAAAACTCTCGTGTTCTACAAAGGAGGAGCTCCAAGAGGCACTAAAACCAAGTGGGTTATGCATGAATATCGTCTCCACTCTGATCTTGCTTCCCCTAATGCCTGCAAGGTTCGTATTTGTTTCTTTCAAGCTAGATCCTATATTATTTGGAGAGGAGAACGAAACATTCTTTATACGGGTGTGGAAACCTCTCTTTAACAAACGCGTTTTAAAAATCTTGAGAGGACAATATCTACTAGTGGTGGGTTTAGGCTGTTACAAATGGTATCAAAGCCAGACACTGGACGGTGTGTCAGTGAGGACGCTGGGCATCGAATGGGGTGGATTGTGAGATCTCACATCAGTTGTAGAACGAAACGTTTTTATAAGGGTGTGAAAACCTCTTATTAGCAAAAGTGTTTTAAAAATCTTGAGAAAAGTCTGAAAGGGAAAGCTCAAAGCCGACAATATTGGCTAGATGTGGGCTTAAACTATTACAAATGATATTAGAGTAAATTTTGATGGAAGTCCGAAAGGAAAAGCCCACAATATCAGCTAGCTGTGGGCTTAATGGTTACAAATAGTATCAGAGCAAATCTTGAAAGAAACCGGAAAAGAAAAGCCCAAAGAGGACAATATGTGCTAGTGGTGAGCTTGAATTTTTACAAATAGTATCAGAGTCCGACTTCGGGCGGTGTGTCGGTGAAGACACTGGCCCCAAATGAGGTGGATTATGAGATCCCACATCGGTTGGAGAGAAAAACGAAACATTCTTATAAAGACGTCTCCTTAGAATACGTATTTTAAAAATTTTGAGGGAAGCGTGAAAGGGAAAACTCAAATCGGACAATATTTGCTAGCACTAGGCTTCACCTGTTACAAATGGTTTCAGAGCCATACACCAAGCCGTATGAGAGCAAGGATGGTAGCCACTAAGCTTGGACGGTTACAAATGGTATCAGAAGTGTACCAGCAAGAATGCTGGCCCGAAGAAGTAGATTGTAAATTCTTACGTCAATTGGAGAGAGAACAAGTACCAACAAGGAGGCTAGGCCCGAAAGGAGATGGACGAAGAGAACGGAACATTCTTAATCTTTTTAAGTGTCAAAATTTTGCTAATTTTATGTGTGATTTGATGCAGGATGAATGGGTTCTATGCAGAATAATTCACAAATCAGGAGAGAAGACAAAACCAAGATCCTTCCAACAACAACAAACATGTCACCAAGAATCATCTCCCTTGTCGGTCCCCTCTCCCATTTCTCCGCCGCCATTACTACTCGACACATCTCAAACCATAGACCATAACAACATCCGCCTCCAAGCAGCTCTACACAACCTTCACCGCCATGAAAATGGCCTCGACAGCTTCAACATGAACAACCCACATTTCATGTTCCAACCAAACCCCTTTCCATTTGGCTTAAATCTCGACACCCATTTCTGCCCGCCGTCAATTCAGGGGACCAACACCGACTTTCATGGCCATTTTAACCCACAGTTGTTGTTCGAAGGCGGCGGAGGAGGTAGTCGGGAGGCGTCGAGCTTTGCTGTGGATGGTGGCGCGTTGGTTGATGTGGCTGCTTATGCTGGTGGTCGTGGTGAGTTGGATGAGAATTGGAGCGGAGGGAGGTGATGAGATGTTTGCGTTAGATTATAATTGTTATTCTCCACCTGTATGGATATGGAACGATACAACCACGAAATGTTTACGAAATGGTTAGGATATGGAACGATATTTGTACGGATCCCCAAGCATTTTTGCTTCGTGGTGTTGGATGATGGTCGAAAATGGATGTCTACTACAATAATATCTACTTGGAACTTAGCTTAATTTATGACATTTTCGTGGGA

mRNA sequence

CACAACCAATCGTCCTGAAAAGTTGAAATAATTGTAATAAAGTGTTTGTCTTCTCCAACTTCTTCATCATGTTCTAAGTTTCAAAGCTTTTAAGCTCTTAAAATTCTCTTTATTATTTCCCAATAACTCATATCTCTCTCTACAAAATGTTTGGAATTGAAGAAGTTATTGATGAACTAAATGGAGAAGAAGCTGATAATGCTAAGGAAAGGCATAGATTATTGCCACCAGGCTTTAGGTTTCACCCTACTGATGAAGAACTCATTGCCTTTTATCTTGCTTCAAAGGTCTTTAAACCTTCAAATTTTCATGGTGTCAATATTGCTGAAGTTGACCTCAATAGATGTGAGCCTTGGGAGCTTCCAGATGAGGCAAAGATGGGAGAGAAAGAATGGTATTTCTTCAGCTTAAGAGTGAGGAAGTATCCGACAGGATTAAGAACCAACAGAGCCACAGTGGCTGGTTACTGGAAAGCCACAGGGAAAGACAGGCAAATTCACAGTAGTTCCAATGGAGTGAAGCTTGGAACAAAGAAAACTCTCGTGTTCTACAAAGGAGGAGCTCCAAGAGGCACTAAAACCAAGTGGGATGAATGGGTTCTATGCAGAATAATTCACAAATCAGGAGAGAAGACAAAACCAAGATCCTTCCAACAACAACAAACATGTCACCAAGAATCATCTCCCTTGTCGGTCCCCTCTCCCATTTCTCCGCCGCCATTACTACTCGACACATCTCAAACCATAGACCATAACAACATCCGCCTCCAAGCAGCTCTACACAACCTTCACCGCCATGAAAATGGCCTCGACAGCTTCAACATGAACAACCCACATTTCATGTTCCAACCAAACCCCTTTCCATTTGGCTTAAATCTCGACACCCATTTCTGCCCGCCGTCAATTCAGGGGACCAACACCGACTTTCATGGCCATTTTAACCCACAGTTGTTGTTCGAAGGCGGCGGAGGAGGTAGTCGGGAGGCGTCGAGCTTTGCTGTGGATGGTGGCGCGTTGGTTGATGTGGCTGCTTATGCTGGTGGTCGTGGTGAGTTGGATGAGAATTGGAGCGGAGGGAGGTGATGAGATGTTTGCGTTAGATTATAATTGTTATTCTCCACCTGTATGGATATGGAACGATACAACCACGAAATGTTTACGAAATGGTTAGGATATGGAACGATATTTGTACGGATCCCCAAGCATTTTTGCTTCGTGGTGTTGGATGATGGTCGAAAATGGATGTCTACTACAATAATATCTACTTGGAACTTAGCTTAATTTATGACATTTTCGTGGGA

Coding sequence (CDS)

ATGTTTGGAATTGAAGAAGTTATTGATGAACTAAATGGAGAAGAAGCTGATAATGCTAAGGAAAGGCATAGATTATTGCCACCAGGCTTTAGGTTTCACCCTACTGATGAAGAACTCATTGCCTTTTATCTTGCTTCAAAGGTCTTTAAACCTTCAAATTTTCATGGTGTCAATATTGCTGAAGTTGACCTCAATAGATGTGAGCCTTGGGAGCTTCCAGATGAGGCAAAGATGGGAGAGAAAGAATGGTATTTCTTCAGCTTAAGAGTGAGGAAGTATCCGACAGGATTAAGAACCAACAGAGCCACAGTGGCTGGTTACTGGAAAGCCACAGGGAAAGACAGGCAAATTCACAGTAGTTCCAATGGAGTGAAGCTTGGAACAAAGAAAACTCTCGTGTTCTACAAAGGAGGAGCTCCAAGAGGCACTAAAACCAAGTGGGATGAATGGGTTCTATGCAGAATAATTCACAAATCAGGAGAGAAGACAAAACCAAGATCCTTCCAACAACAACAAACATGTCACCAAGAATCATCTCCCTTGTCGGTCCCCTCTCCCATTTCTCCGCCGCCATTACTACTCGACACATCTCAAACCATAGACCATAACAACATCCGCCTCCAAGCAGCTCTACACAACCTTCACCGCCATGAAAATGGCCTCGACAGCTTCAACATGAACAACCCACATTTCATGTTCCAACCAAACCCCTTTCCATTTGGCTTAAATCTCGACACCCATTTCTGCCCGCCGTCAATTCAGGGGACCAACACCGACTTTCATGGCCATTTTAACCCACAGTTGTTGTTCGAAGGCGGCGGAGGAGGTAGTCGGGAGGCGTCGAGCTTTGCTGTGGATGGTGGCGCGTTGGTTGATGTGGCTGCTTATGCTGGTGGTCGTGGTGAGTTGGATGAGAATTGGAGCGGAGGGAGGTGA

Protein sequence

MFGIEEVIDELNGEEADNAKERHRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIAEVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSSSNGVKLGTKKTLVFYKGGAPRGTKTKWDEWVLCRIIHKSGEKTKPRSFQQQQTCHQESSPLSVPSPISPPPLLLDTSQTIDHNNIRLQAALHNLHRHENGLDSFNMNNPHFMFQPNPFPFGLNLDTHFCPPSIQGTNTDFHGHFNPQLLFEGGGGGSREASSFAVDGGALVDVAAYAGGRGELDENWSGGR

Homology

[Close]

BLAST of Cp4.1LG11g07710.1 vs. ExPASy Swiss-Prot
Match: Q9S851 (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana OX=3702 GN=NAC031 PE=1 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 4.2e-58
Identity = 123/249 (49.40%), Postives = 152/249 (61.04%), Query Frame = 0


Query: 1   MFGIEEVIDELNGEEADNAKERHRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIA 60
           M  +E+V+ EL GEE        R LPPGFRFHPTDEELI FYLASK+F      G++I+
Sbjct: 2   MLAVEDVLSELAGEE-----RNERGLPPGFRFHPTDEELITFYLASKIFH-GGLSGIHIS 61

Query: 61  EVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSS 120
           EVDLNRCEPWELP+ AKMGE+EWYF+SLR RKYPTGLRTNRAT AGYWKATGKD+++ S 
Sbjct: 62  EVDLNRCEPWELPEMAKMGEREWYFYSLRDRKYPTGLRTNRATTAGYWKATGKDKEVFSG 121

Query: 121 SNGVKLGTKKTLVFYKGGAPRGTKTKW------------------DEWVLCRIIHKSGEK 180
             G  +G KKTLVFYKG APRG KTKW                  +EWV+CR+ +K+G++
Sbjct: 122 GGGQLVGMKKTLVFYKGRAPRGLKTKWVMHEYRLENDHSHRHTCKEEWVICRVFNKTGDR 181

Query: 181 TK------------PRSFQQQQTCHQESSPLSV-PSPIS----PPPLLLDTSQTIDHNNI 215
                           S       H E+ PL + PS  +    P  L  D  Q  ++NN 
Sbjct: 182 KNVGLIHNQISYLHNHSLSTTHHHHHEALPLLIEPSNKTLTNFPSLLYDDPHQNYNNNNF 241

[Close]

BLAST of Cp4.1LG11g07710.1 vs. ExPASy Swiss-Prot
Match: Q9FRV4 (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana OX=3702 GN=NAC054 PE=1 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 4.2e-50
Identity = 99/161 (61.49%), Postives = 112/161 (69.57%), Query Frame = 0


Query: 21  ERHRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIAEVDLNRCEPWELPDEAKMGE 80
           E   L+PPGFRFHPTDEELI +YL  KV   SNF    I++VDLN+ EPWELP++AKMGE
Sbjct: 15  EDESLMPPGFRFHPTDEELITYYLLKKVL-DSNFSCAAISQVDLNKSEPWELPEKAKMGE 74

Query: 81  KEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSSSNGVKLGTKKTLVFYKGGAP 140
           KEWYFF+LR RKYPTGLRTNRAT AGYWKATGKDR+I SS     LG KKTLVFYKG AP
Sbjct: 75  KEWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAP 134

Query: 141 RGTKTKW---------------------DEWVLCRIIHKSG 161
           +G K+ W                     DEWVLC++  KSG
Sbjct: 135 KGEKSCWVMHEYRLDGKFSYHYISSSAKDEWVLCKVCLKSG 174

[Close]

BLAST of Cp4.1LG11g07710.1 vs. ExPASy Swiss-Prot
Match: A2WJP3 (NAC domain-containing protein 20 OS=Oryza sativa subsp. indica OX=39946 GN=NAC20 PE=1 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 6.1e-49
Identity = 126/308 (40.91%), Postives = 155/308 (50.32%), Query Frame = 0


Query: 15  EADNAKERHRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIAEVDLNRCEPWELPD 74
           E     ER   LPPGFRFHPTDEE+I FYLA KV     F    I EVDLN+CEPW+LP 
Sbjct: 3   EQQQQVERQPDLPPGFRFHPTDEEIITFYLAPKVVDSRGFCVAAIGEVDLNKCEPWDLPG 62

Query: 75  EAKM-GEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSSSNGVKLGTKKTLV 134
           +AKM GEKEWYF+  + RKYPTG+RTNRAT AGYWKATGKD++I  + + + +G KKTLV
Sbjct: 63  KAKMNGEKEWYFYCQKDRKYPTGMRTNRATEAGYWKATGKDKEIFRNHH-MLIGMKKTLV 122

Query: 135 FYKGGAPRGTKTKW------------------------DEWVLCRIIHKSGEKTKP---- 194
           FYKG AP+G KT W                        D+W +CRI HKS    KP    
Sbjct: 123 FYKGRAPKGDKTNWVMHEYRLADASPPPPPSSAEPPRQDDWAVCRIFHKSSGIKKPVPVA 182

Query: 195 -------RSFQQQQTCHQESSP-LSVPSPISPPPLLLDTSQTIDHNNIRLQAALHNLHRH 254
                   ++QQQQ     S+  + VP  +  P  + D  Q +D  +     +L      
Sbjct: 183 PHQVPAAANYQQQQQMAMASAGIIQVPMQMQMPS-MSDQLQMLDDFSTTASLSL------ 242

Query: 255 ENGLDSFNMNNPHFMFQPNPFPFGLNLDTHFCPPSIQGTNTDFHGHFNPQLLFEGGGGGS 286
                   M  P +   P  FP  +N   H  P    G N   + H   Q+   GGG   
Sbjct: 243 --------MAPPSYSTLPAGFPLQINSGAH--PQQFVG-NPSMYYHQQQQMDMAGGGFVV 291

[Close]

BLAST of Cp4.1LG11g07710.1 vs. ExPASy Swiss-Prot
Match: Q9FTY0 (NAC domain-containing protein 20 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC20 PE=1 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 8.0e-49
Identity = 126/308 (40.91%), Postives = 154/308 (50.00%), Query Frame = 0


Query: 15  EADNAKERHRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIAEVDLNRCEPWELPD 74
           E     ER   LPPGFRFHPTDEE+I FYLA KV     F    I EVDLN+CEPW+LP 
Sbjct: 3   EQQQQVERQPDLPPGFRFHPTDEEIITFYLAPKVVDSRGFCVAAIGEVDLNKCEPWDLPG 62

Query: 75  EAKM-GEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSSSNGVKLGTKKTLV 134
           +AKM GEKEWYF+  + RKYPTG+RTNRAT AGYWKATGKD++I    + + +G KKTLV
Sbjct: 63  KAKMNGEKEWYFYCQKDRKYPTGMRTNRATEAGYWKATGKDKEIFRDHH-MLIGMKKTLV 122

Query: 135 FYKGGAPRGTKTKW------------------------DEWVLCRIIHKSGEKTKP---- 194
           FYKG AP+G KT W                        D+W +CRI HKS    KP    
Sbjct: 123 FYKGRAPKGDKTNWVMHEYRLADASPPPPPSSAEPPRQDDWAVCRIFHKSSGIKKPVPVA 182

Query: 195 -------RSFQQQQTCHQESSP-LSVPSPISPPPLLLDTSQTIDHNNIRLQAALHNLHRH 254
                   ++QQQQ     S+  + VP  +  P  + D  Q +D  +     +L      
Sbjct: 183 PHQVPAAANYQQQQQMAMASAGIIQVPMQMQMPS-MSDQLQMLDDFSTTASLSL------ 242

Query: 255 ENGLDSFNMNNPHFMFQPNPFPFGLNLDTHFCPPSIQGTNTDFHGHFNPQLLFEGGGGGS 286
                   M  P +   P  FP  +N   H  P    G N   + H   Q+   GGG   
Sbjct: 243 --------MAPPSYSTLPAGFPLQINSGAH--PQQFVG-NPSMYYHQQQQMDMAGGGFVV 291

[Close]

BLAST of Cp4.1LG11g07710.1 vs. ExPASy Swiss-Prot
Match: O04017 (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana OX=3702 GN=NAC098 PE=1 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 5.7e-47
Identity = 111/227 (48.90%), Postives = 127/227 (55.95%), Query Frame = 0


Query: 26  LPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIAEVDLNRCEPWELPDEAKMGEKEWYF 85
           LPPGFRFHPTDEELI  YL  KV     F    IAEVDLN+CEPW+LP  AKMGEKEWYF
Sbjct: 17  LPPGFRFHPTDEELITHYLLRKVL-DGCFSSRAIAEVDLNKCEPWQLPGRAKMGEKEWYF 76

Query: 86  FSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSSSNGVKLGTKKTLVFYKGGAPRGTKT 145
           FSLR RKYPTGLRTNRAT AGYWKATGKDR+I SS     +G KKTLVFYKG AP+G K+
Sbjct: 77  FSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKGEKS 136

Query: 146 KW---------------------DEWVLCRIIHKS------------------------- 205
            W                     DEWV+ R+  K+                         
Sbjct: 137 NWVMHEYRLEGKFSYHFISRSSKDEWVISRVFQKTTLASTGAVSEGGGGGGATVSVSSGT 196

[Close]

BLAST of Cp4.1LG11g07710.1 vs. NCBI nr
Match: XP_023546040.1 (protein CUP-SHAPED COTYLEDON 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 644 bits (1661), Expect = 4.16e-233
Identity = 311/329 (94.53%), Postives = 311/329 (94.53%), Query Frame = 0


Query: 1   MFGIEEVIDELNGEEADNAKERHRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIA 60
           MFGIEEVIDELNGEEADNAKERHRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIA
Sbjct: 1   MFGIEEVIDELNGEEADNAKERHRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIA 60

Query: 61  EVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSS 120
           EVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSS
Sbjct: 61  EVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSS 120

Query: 121 SNGVKLGTKKTLVFYKGGAPRGTKTKW------------------DEWVLCRIIHKSGEK 180
           SNGVKLGTKKTLVFYKGGAPRGTKTKW                  DEWVLCRIIHKSGEK
Sbjct: 121 SNGVKLGTKKTLVFYKGGAPRGTKTKWVMHEYRLHSDLASPNACKDEWVLCRIIHKSGEK 180

Query: 181 TKPRSFQQQQTCHQESSPLSVPSPISPPPLLLDTSQTIDHNNIRLQAALHNLHRHENGLD 240
           TKPRSFQQQQTCHQESSPLSVPSPISPPPLLLDTSQTIDHNNIRLQAALHNLHRHENGLD
Sbjct: 181 TKPRSFQQQQTCHQESSPLSVPSPISPPPLLLDTSQTIDHNNIRLQAALHNLHRHENGLD 240

Query: 241 SFNMNNPHFMFQPNPFPFGLNLDTHFCPPSIQGTNTDFHGHFNPQLLFEGGGGGSREASS 300
           SFNMNNPHFMFQPNPFPFGLNLDTHFCPPSIQGTNTDFHGHFNPQLLFEGGGGGSREASS
Sbjct: 241 SFNMNNPHFMFQPNPFPFGLNLDTHFCPPSIQGTNTDFHGHFNPQLLFEGGGGGSREASS 300

Query: 301 FAVDGGALVDVAAYAGGRGELDENWSGGR 311
           FAVDGGALVDVAAYAGGRGELDENWSGGR
Sbjct: 301 FAVDGGALVDVAAYAGGRGELDENWSGGR 329

[Close]

BLAST of Cp4.1LG11g07710.1 vs. NCBI nr
Match: XP_022946380.1 (protein CUP-SHAPED COTYLEDON 3-like [Cucurbita moschata] >KAG6599086.1 Protein CUP-SHAPED COTYLEDON 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 626 bits (1614), Expect = 6.09e-226
Identity = 304/329 (92.40%), Postives = 305/329 (92.71%), Query Frame = 0


Query: 1   MFGIEEVIDELNGEEADNAKERHRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIA 60
           MFGIEEVIDELNGEEADNAKERHRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIA
Sbjct: 1   MFGIEEVIDELNGEEADNAKERHRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIA 60

Query: 61  EVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSS 120
           EVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSS
Sbjct: 61  EVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSS 120

Query: 121 SNGVKLGTKKTLVFYKGGAPRGTKTKW------------------DEWVLCRIIHKSGEK 180
           SNGVKLGTKKTLVFYKGGAPRGTKTKW                  DEWVLCRIIHKSGEK
Sbjct: 121 SNGVKLGTKKTLVFYKGGAPRGTKTKWVMHEYRLHSDLASPNACKDEWVLCRIIHKSGEK 180

Query: 181 TKPRSFQQQQTCHQESSPLSVPSPISPPPLLLDTSQTIDHNNIRLQAALHNLHRHENGLD 240
           TKPRSFQ QQTCHQESSPLSVPSPISPPPLLLDT QTIDHNNIRLQAALHNLHRHENGLD
Sbjct: 181 TKPRSFQPQQTCHQESSPLSVPSPISPPPLLLDTPQTIDHNNIRLQAALHNLHRHENGLD 240

Query: 241 SFNMNNPHFMFQPNPFPFGLNLDTHFCPPSIQGTNTDFHGHFNPQLLFEGGGGGSREASS 300
           SFNMNNPHFMFQPNPFPFGLNLDTHF PPSIQGTNT F GHFNPQLLFEGGGGGS+EASS
Sbjct: 241 SFNMNNPHFMFQPNPFPFGLNLDTHFWPPSIQGTNTHFQGHFNPQLLFEGGGGGSQEASS 300

Query: 301 FAVDGGALVDVAAYAGGRGELDENWSGGR 311
           FAVDGGALVDVAAYAGGRGE DENWSGGR
Sbjct: 301 FAVDGGALVDVAAYAGGRGESDENWSGGR 329

[Close]

BLAST of Cp4.1LG11g07710.1 vs. NCBI nr
Match: XP_022999737.1 (protein CUP-SHAPED COTYLEDON 3-like [Cucurbita maxima])

HSP 1 Score: 610 bits (1573), Expect = 1.08e-219
Identity = 297/329 (90.27%), Postives = 301/329 (91.49%), Query Frame = 0


Query: 1   MFGIEEVIDELNGEEADNAKERHRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIA 60
           MFGIEEVIDELNGEEADNAK++HRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIA
Sbjct: 1   MFGIEEVIDELNGEEADNAKQKHRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIA 60

Query: 61  EVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSS 120
           EVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSS
Sbjct: 61  EVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSS 120

Query: 121 SNGVKLGTKKTLVFYKGGAPRGTKTKW------------------DEWVLCRIIHKSGEK 180
           SNGVKLGTKKTLVFYKGGAPRGTKTKW                  DEWVLCRIIHKSGEK
Sbjct: 121 SNGVKLGTKKTLVFYKGGAPRGTKTKWVMHEYRLHSDLASPTACKDEWVLCRIIHKSGEK 180

Query: 181 TKPRSFQQQQTCHQESSPLSVPSPISPPPLLLDTSQTIDHNNIRLQAALHNLHRHENGLD 240
           TKPRSFQ QQTCHQESSPLSVPS ISPPPLLLDT QTIDHNN RLQAALHNL+RHENGLD
Sbjct: 181 TKPRSFQPQQTCHQESSPLSVPSTISPPPLLLDTPQTIDHNNNRLQAALHNLYRHENGLD 240

Query: 241 SFNMNNPHFMFQPNPFPFGLNLDTHFCPPSIQGTNTDFHGHFNPQLLFEGGGGGSREASS 300
           SFNMNNPHFMFQPNPFPFGLNLDTH  PPSIQGTNTDF GHFNPQLLF+  GGGSREASS
Sbjct: 241 SFNMNNPHFMFQPNPFPFGLNLDTHLWPPSIQGTNTDFQGHFNPQLLFDCDGGGSREASS 300

Query: 301 FAVDGGALVDVAAYAGGRGELDENWSGGR 311
           FAVDGGALVDVAAYAGGRGE DENWSGGR
Sbjct: 301 FAVDGGALVDVAAYAGGRGESDENWSGGR 329

[Close]

BLAST of Cp4.1LG11g07710.1 vs. NCBI nr
Match: KAG7030023.1 (Protein CUP-SHAPED COTYLEDON 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 588 bits (1516), Expect = 1.33e-211
Identity = 287/300 (95.67%), Postives = 287/300 (95.67%), Query Frame = 0


Query: 1   MFGIEEVIDELNGEEADNAKERHRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIA 60
           MFGIEEVIDELNGEEADNAKERHRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIA
Sbjct: 1   MFGIEEVIDELNGEEADNAKERHRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIA 60

Query: 61  EVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSS 120
           EVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSS
Sbjct: 61  EVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSS 120

Query: 121 SNGVKLGTKKTLVFYKGGAPRGTKTKWDEWVLCRIIHKSGEKTKPRSFQQQQTCHQESSP 180
           SNGVKLGTKKTLVFYKGGAPRGTKTK        IIHKSGEKTKPRSFQ QQTCHQESSP
Sbjct: 121 SNGVKLGTKKTLVFYKGGAPRGTKTK--------IIHKSGEKTKPRSFQPQQTCHQESSP 180

Query: 181 LSVPSPISPPPLLLDTSQTIDHNNIRLQAALHNLHRHENGLDSFNMNNPHFMFQPNPFPF 240
           LSVPSPISPPPLLLDT QTIDHNNIRLQAALHNLHRHENGLDSFNMNNPHFMFQPNPFPF
Sbjct: 181 LSVPSPISPPPLLLDTPQTIDHNNIRLQAALHNLHRHENGLDSFNMNNPHFMFQPNPFPF 240

Query: 241 GLNLDTHFCPPSIQGTNTDFHGHFNPQLLFEGGGGGSREASSFAVDGGALVDVAAYAGGR 300
           GLNLDTHF PPSIQGTNT F GHFNPQLLFEGGGGGSREASSFAVDGGALVDVAAYAGGR
Sbjct: 241 GLNLDTHFWPPSIQGTNTHFQGHFNPQLLFEGGGGGSREASSFAVDGGALVDVAAYAGGR 292

[Close]

BLAST of Cp4.1LG11g07710.1 vs. NCBI nr
Match: XP_008464817.1 (PREDICTED: protein CUP-SHAPED COTYLEDON 3 isoform X2 [Cucumis melo] >KAA0045409.1 protein CUP-SHAPED COTYLEDON 3 isoform X2 [Cucumis melo var. makuwa] >TYK11328.1 protein CUP-SHAPED COTYLEDON 3 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 444 bits (1143), Expect = 4.56e-154
Identity = 239/347 (68.88%), Postives = 262/347 (75.50%), Query Frame = 0


Query: 1   MFGIEEVIDELNGEE-----ADNAKE-----RHRLLPPGFRFHPTDEELIAFYLASKVFK 60
           MFGIEEVI ELN E+     +DN KE      HRLLPPG+RFHPTDEELIAFYLASKVFK
Sbjct: 1   MFGIEEVIGELNREDDHEEKSDNGKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK 60

Query: 61  PSNFH-GVNIAEVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120
           PSNF  GVNIAEVDLNRCEPWELP+EAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK
Sbjct: 61  PSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120

Query: 121 ATGKDRQIHSSSNGVKLGTKKTLVFYKGGAPRGTKTKW------------------DEWV 180
           ATGKDRQIHSS NGVKLGTKKTLVFYKGGAPRG KTKW                  DEWV
Sbjct: 121 ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKDEWV 180

Query: 181 LCRIIHKSGEKTKPRSFQQQQTCHQESSPLSVPSPISPPPLLLDTSQTIDHNNIRLQAAL 240
           LCRIIHKSGEK KP+S   Q+T         +PSPIS P LLL+ +Q+I+HNNI+ Q   
Sbjct: 181 LCRIIHKSGEKIKPKSSSFQET---------IPSPISLPSLLLNATQSINHNNIQFQPPP 240

Query: 241 HNLHRHENGLDSFNMNNPHFMFQPNPFPFGL-NLDTHFC-----PPSIQGTNTDFHGHFN 300
           HN+  HENGL+SF +NNPHF+FQPN F FGL N DTH       PPSIQ T+T++H HFN
Sbjct: 241 HNIQHHENGLESFIINNPHFIFQPNLFSFGLHNPDTHLSTPPPPPPSIQMTDTNYHPHFN 300

Query: 301 PQLLFEGGGGGSREASSFAVD-GGALVDVAAYAGGRGEL-DENWSGG 310
           P LL +GG   S++ASSF VD GG LVDVA Y G RG+  DENWSGG
Sbjct: 301 PSLLLDGGCD-SQQASSFGVDSGGTLVDVAGYGGARGDQSDENWSGG 337

[Close]

BLAST of Cp4.1LG11g07710.1 vs. ExPASy TrEMBL
Match: A0A6J1G3P2 (protein CUP-SHAPED COTYLEDON 3-like OS=Cucurbita moschata OX=3662 GN=LOC111450457 PE=4 SV=1)

HSP 1 Score: 626 bits (1614), Expect = 2.95e-226
Identity = 304/329 (92.40%), Postives = 305/329 (92.71%), Query Frame = 0


Query: 1   MFGIEEVIDELNGEEADNAKERHRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIA 60
           MFGIEEVIDELNGEEADNAKERHRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIA
Sbjct: 1   MFGIEEVIDELNGEEADNAKERHRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIA 60

Query: 61  EVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSS 120
           EVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSS
Sbjct: 61  EVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSS 120

Query: 121 SNGVKLGTKKTLVFYKGGAPRGTKTKW------------------DEWVLCRIIHKSGEK 180
           SNGVKLGTKKTLVFYKGGAPRGTKTKW                  DEWVLCRIIHKSGEK
Sbjct: 121 SNGVKLGTKKTLVFYKGGAPRGTKTKWVMHEYRLHSDLASPNACKDEWVLCRIIHKSGEK 180

Query: 181 TKPRSFQQQQTCHQESSPLSVPSPISPPPLLLDTSQTIDHNNIRLQAALHNLHRHENGLD 240
           TKPRSFQ QQTCHQESSPLSVPSPISPPPLLLDT QTIDHNNIRLQAALHNLHRHENGLD
Sbjct: 181 TKPRSFQPQQTCHQESSPLSVPSPISPPPLLLDTPQTIDHNNIRLQAALHNLHRHENGLD 240

Query: 241 SFNMNNPHFMFQPNPFPFGLNLDTHFCPPSIQGTNTDFHGHFNPQLLFEGGGGGSREASS 300
           SFNMNNPHFMFQPNPFPFGLNLDTHF PPSIQGTNT F GHFNPQLLFEGGGGGS+EASS
Sbjct: 241 SFNMNNPHFMFQPNPFPFGLNLDTHFWPPSIQGTNTHFQGHFNPQLLFEGGGGGSQEASS 300

Query: 301 FAVDGGALVDVAAYAGGRGELDENWSGGR 311
           FAVDGGALVDVAAYAGGRGE DENWSGGR
Sbjct: 301 FAVDGGALVDVAAYAGGRGESDENWSGGR 329

[Close]

BLAST of Cp4.1LG11g07710.1 vs. ExPASy TrEMBL
Match: A0A6J1KBM6 (protein CUP-SHAPED COTYLEDON 3-like OS=Cucurbita maxima OX=3661 GN=LOC111493995 PE=4 SV=1)

HSP 1 Score: 610 bits (1573), Expect = 5.24e-220
Identity = 297/329 (90.27%), Postives = 301/329 (91.49%), Query Frame = 0


Query: 1   MFGIEEVIDELNGEEADNAKERHRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIA 60
           MFGIEEVIDELNGEEADNAK++HRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIA
Sbjct: 1   MFGIEEVIDELNGEEADNAKQKHRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIA 60

Query: 61  EVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSS 120
           EVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSS
Sbjct: 61  EVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSS 120

Query: 121 SNGVKLGTKKTLVFYKGGAPRGTKTKW------------------DEWVLCRIIHKSGEK 180
           SNGVKLGTKKTLVFYKGGAPRGTKTKW                  DEWVLCRIIHKSGEK
Sbjct: 121 SNGVKLGTKKTLVFYKGGAPRGTKTKWVMHEYRLHSDLASPTACKDEWVLCRIIHKSGEK 180

Query: 181 TKPRSFQQQQTCHQESSPLSVPSPISPPPLLLDTSQTIDHNNIRLQAALHNLHRHENGLD 240
           TKPRSFQ QQTCHQESSPLSVPS ISPPPLLLDT QTIDHNN RLQAALHNL+RHENGLD
Sbjct: 181 TKPRSFQPQQTCHQESSPLSVPSTISPPPLLLDTPQTIDHNNNRLQAALHNLYRHENGLD 240

Query: 241 SFNMNNPHFMFQPNPFPFGLNLDTHFCPPSIQGTNTDFHGHFNPQLLFEGGGGGSREASS 300
           SFNMNNPHFMFQPNPFPFGLNLDTH  PPSIQGTNTDF GHFNPQLLF+  GGGSREASS
Sbjct: 241 SFNMNNPHFMFQPNPFPFGLNLDTHLWPPSIQGTNTDFQGHFNPQLLFDCDGGGSREASS 300

Query: 301 FAVDGGALVDVAAYAGGRGELDENWSGGR 311
           FAVDGGALVDVAAYAGGRGE DENWSGGR
Sbjct: 301 FAVDGGALVDVAAYAGGRGESDENWSGGR 329

[Close]

BLAST of Cp4.1LG11g07710.1 vs. ExPASy TrEMBL
Match: A0A5A7TVZ6 (Protein CUP-SHAPED COTYLEDON 3 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold807G00010 PE=4 SV=1)

HSP 1 Score: 444 bits (1143), Expect = 2.21e-154
Identity = 239/347 (68.88%), Postives = 262/347 (75.50%), Query Frame = 0


Query: 1   MFGIEEVIDELNGEE-----ADNAKE-----RHRLLPPGFRFHPTDEELIAFYLASKVFK 60
           MFGIEEVI ELN E+     +DN KE      HRLLPPG+RFHPTDEELIAFYLASKVFK
Sbjct: 1   MFGIEEVIGELNREDDHEEKSDNGKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK 60

Query: 61  PSNFH-GVNIAEVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120
           PSNF  GVNIAEVDLNRCEPWELP+EAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK
Sbjct: 61  PSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120

Query: 121 ATGKDRQIHSSSNGVKLGTKKTLVFYKGGAPRGTKTKW------------------DEWV 180
           ATGKDRQIHSS NGVKLGTKKTLVFYKGGAPRG KTKW                  DEWV
Sbjct: 121 ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKDEWV 180

Query: 181 LCRIIHKSGEKTKPRSFQQQQTCHQESSPLSVPSPISPPPLLLDTSQTIDHNNIRLQAAL 240
           LCRIIHKSGEK KP+S   Q+T         +PSPIS P LLL+ +Q+I+HNNI+ Q   
Sbjct: 181 LCRIIHKSGEKIKPKSSSFQET---------IPSPISLPSLLLNATQSINHNNIQFQPPP 240

Query: 241 HNLHRHENGLDSFNMNNPHFMFQPNPFPFGL-NLDTHFC-----PPSIQGTNTDFHGHFN 300
           HN+  HENGL+SF +NNPHF+FQPN F FGL N DTH       PPSIQ T+T++H HFN
Sbjct: 241 HNIQHHENGLESFIINNPHFIFQPNLFSFGLHNPDTHLSTPPPPPPSIQMTDTNYHPHFN 300

Query: 301 PQLLFEGGGGGSREASSFAVD-GGALVDVAAYAGGRGEL-DENWSGG 310
           P LL +GG   S++ASSF VD GG LVDVA Y G RG+  DENWSGG
Sbjct: 301 PSLLLDGGCD-SQQASSFGVDSGGTLVDVAGYGGARGDQSDENWSGG 337

[Close]

BLAST of Cp4.1LG11g07710.1 vs. ExPASy TrEMBL
Match: A0A1S3CMG2 (protein CUP-SHAPED COTYLEDON 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502608 PE=4 SV=1)

HSP 1 Score: 444 bits (1143), Expect = 2.21e-154
Identity = 239/347 (68.88%), Postives = 262/347 (75.50%), Query Frame = 0


Query: 1   MFGIEEVIDELNGEE-----ADNAKE-----RHRLLPPGFRFHPTDEELIAFYLASKVFK 60
           MFGIEEVI ELN E+     +DN KE      HRLLPPG+RFHPTDEELIAFYLASKVFK
Sbjct: 1   MFGIEEVIGELNREDDHEEKSDNGKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK 60

Query: 61  PSNFH-GVNIAEVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120
           PSNF  GVNIAEVDLNRCEPWELP+EAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK
Sbjct: 61  PSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120

Query: 121 ATGKDRQIHSSSNGVKLGTKKTLVFYKGGAPRGTKTKW------------------DEWV 180
           ATGKDRQIHSS NGVKLGTKKTLVFYKGGAPRG KTKW                  DEWV
Sbjct: 121 ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKDEWV 180

Query: 181 LCRIIHKSGEKTKPRSFQQQQTCHQESSPLSVPSPISPPPLLLDTSQTIDHNNIRLQAAL 240
           LCRIIHKSGEK KP+S   Q+T         +PSPIS P LLL+ +Q+I+HNNI+ Q   
Sbjct: 181 LCRIIHKSGEKIKPKSSSFQET---------IPSPISLPSLLLNATQSINHNNIQFQPPP 240

Query: 241 HNLHRHENGLDSFNMNNPHFMFQPNPFPFGL-NLDTHFC-----PPSIQGTNTDFHGHFN 300
           HN+  HENGL+SF +NNPHF+FQPN F FGL N DTH       PPSIQ T+T++H HFN
Sbjct: 241 HNIQHHENGLESFIINNPHFIFQPNLFSFGLHNPDTHLSTPPPPPPSIQMTDTNYHPHFN 300

Query: 301 PQLLFEGGGGGSREASSFAVD-GGALVDVAAYAGGRGEL-DENWSGG 310
           P LL +GG   S++ASSF VD GG LVDVA Y G RG+  DENWSGG
Sbjct: 301 PSLLLDGGCD-SQQASSFGVDSGGTLVDVAGYGGARGDQSDENWSGG 337

[Close]

BLAST of Cp4.1LG11g07710.1 vs. ExPASy TrEMBL
Match: A0A1S3CMC2 (protein CUP-SHAPED COTYLEDON 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502608 PE=4 SV=1)

HSP 1 Score: 444 bits (1142), Expect = 3.25e-154
Identity = 239/348 (68.68%), Postives = 262/348 (75.29%), Query Frame = 0


Query: 1   MFGIEEVIDELNGEE-----ADNAKE-----RHRLLPPGFRFHPTDEELIAFYLASKVFK 60
           MFGIEEVI ELN E+     +DN KE      HRLLPPG+RFHPTDEELIAFYLASKVFK
Sbjct: 1   MFGIEEVIGELNREDDHEEKSDNGKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK 60

Query: 61  PSNFH-GVNIAEVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120
           PSNF  GVNIAEVDLNRCEPWELP+EAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK
Sbjct: 61  PSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120

Query: 121 ATGKDRQIHSSSNGVKLGTKKTLVFYKGGAPRGTKTKW-------------------DEW 180
           ATGKDRQIHSS NGVKLGTKKTLVFYKGGAPRG KTKW                   DEW
Sbjct: 121 ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKQDEW 180

Query: 181 VLCRIIHKSGEKTKPRSFQQQQTCHQESSPLSVPSPISPPPLLLDTSQTIDHNNIRLQAA 240
           VLCRIIHKSGEK KP+S   Q+T         +PSPIS P LLL+ +Q+I+HNNI+ Q  
Sbjct: 181 VLCRIIHKSGEKIKPKSSSFQET---------IPSPISLPSLLLNATQSINHNNIQFQPP 240

Query: 241 LHNLHRHENGLDSFNMNNPHFMFQPNPFPFGL-NLDTHFC-----PPSIQGTNTDFHGHF 300
            HN+  HENGL+SF +NNPHF+FQPN F FGL N DTH       PPSIQ T+T++H HF
Sbjct: 241 PHNIQHHENGLESFIINNPHFIFQPNLFSFGLHNPDTHLSTPPPPPPSIQMTDTNYHPHF 300

Query: 301 NPQLLFEGGGGGSREASSFAVD-GGALVDVAAYAGGRGEL-DENWSGG 310
           NP LL +GG   S++ASSF VD GG LVDVA Y G RG+  DENWSGG
Sbjct: 301 NPSLLLDGGCD-SQQASSFGVDSGGTLVDVAGYGGARGDQSDENWSGG 338

[Close]

BLAST of Cp4.1LG11g07710.1 vs. TAIR 10
Match: AT1G76420.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein )

HSP 1 Score: 226.5 bits (576), Expect = 3.0e-59
Identity = 123/249 (49.40%), Postives = 152/249 (61.04%), Query Frame = 0


Query: 1   MFGIEEVIDELNGEEADNAKERHRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIA 60
           M  +E+V+ EL GEE        R LPPGFRFHPTDEELI FYLASK+F      G++I+
Sbjct: 2   MLAVEDVLSELAGEE-----RNERGLPPGFRFHPTDEELITFYLASKIFH-GGLSGIHIS 61

Query: 61  EVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSS 120
           EVDLNRCEPWELP+ AKMGE+EWYF+SLR RKYPTGLRTNRAT AGYWKATGKD+++ S 
Sbjct: 62  EVDLNRCEPWELPEMAKMGEREWYFYSLRDRKYPTGLRTNRATTAGYWKATGKDKEVFSG 121

Query: 121 SNGVKLGTKKTLVFYKGGAPRGTKTKW------------------DEWVLCRIIHKSGEK 180
             G  +G KKTLVFYKG APRG KTKW                  +EWV+CR+ +K+G++
Sbjct: 122 GGGQLVGMKKTLVFYKGRAPRGLKTKWVMHEYRLENDHSHRHTCKEEWVICRVFNKTGDR 181

Query: 181 TK------------PRSFQQQQTCHQESSPLSV-PSPIS----PPPLLLDTSQTIDHNNI 215
                           S       H E+ PL + PS  +    P  L  D  Q  ++NN 
Sbjct: 182 KNVGLIHNQISYLHNHSLSTTHHHHHEALPLLIEPSNKTLTNFPSLLYDDPHQNYNNNNF 241

[Close]

BLAST of Cp4.1LG11g07710.1 vs. TAIR 10
Match: AT3G18400.1 (NAC domain containing protein 58 )

HSP 1 Score: 201.4 bits (511), Expect = 1.0e-51
Identity = 110/227 (48.46%), Postives = 134/227 (59.03%), Query Frame = 0


Query: 26  LPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIAEVDLNRCEPWELPDEAKMGEKEWYF 85
           LPPGFRFHPTDEELI  YL  KV     F G  + +VDLN+CEPW+LP +A MGEKEWYF
Sbjct: 5   LPPGFRFHPTDEELITHYLCRKV-SDIGFTGKAVVDVDLNKCEPWDLPAKASMGEKEWYF 64

Query: 86  FSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSSSNGVKLGTKKTLVFYKGGAPRGTKT 145
           FS R RKYPTGLRTNRAT AGYWK TGKD++I+ S  GV +G KKTLVFYKG AP+G K+
Sbjct: 65  FSQRDRKYPTGLRTNRATEAGYWKTTGKDKEIYRS--GVLVGMKKTLVFYKGRAPKGEKS 124

Query: 146 KW------------------DEWVLCRIIHKSGEKTKPRSFQQQQT-------CHQESSP 205
            W                  +EWV+CR+  KS    K +  Q Q +       C   SS 
Sbjct: 125 NWVMHEYRLESKQPFNPTNKEEWVVCRVFEKSTAAKKAQEQQPQSSQPSFGSPCDANSSM 184

Query: 206 LSVPSPISPPPLLLDTSQTIDHNNIRLQAALHNLHRHENGLDSFNMN 228
            +    I   P L   S TID+NN   Q +  N++  +N   +  +N
Sbjct: 185 ANEFEDIDELPNLNSNSSTIDYNNHIHQYSQRNVYSEDNTTSTAGLN 228

[Close]

BLAST of Cp4.1LG11g07710.1 vs. TAIR 10
Match: AT3G15170.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein )

HSP 1 Score: 199.9 bits (507), Expect = 3.0e-51
Identity = 99/161 (61.49%), Postives = 112/161 (69.57%), Query Frame = 0


Query: 21  ERHRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIAEVDLNRCEPWELPDEAKMGE 80
           E   L+PPGFRFHPTDEELI +YL  KV   SNF    I++VDLN+ EPWELP++AKMGE
Sbjct: 15  EDESLMPPGFRFHPTDEELITYYLLKKVL-DSNFSCAAISQVDLNKSEPWELPEKAKMGE 74

Query: 81  KEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSSSNGVKLGTKKTLVFYKGGAP 140
           KEWYFF+LR RKYPTGLRTNRAT AGYWKATGKDR+I SS     LG KKTLVFYKG AP
Sbjct: 75  KEWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAP 134

Query: 141 RGTKTKW---------------------DEWVLCRIIHKSG 161
           +G K+ W                     DEWVLC++  KSG
Sbjct: 135 KGEKSCWVMHEYRLDGKFSYHYISSSAKDEWVLCKVCLKSG 174

[Close]

BLAST of Cp4.1LG11g07710.1 vs. TAIR 10
Match: AT2G24430.1 (NAC domain containing protein 38 )

HSP 1 Score: 197.2 bits (500), Expect = 1.9e-50
Identity = 96/178 (53.93%), Postives = 117/178 (65.73%), Query Frame = 0


Query: 20  KERHRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIAEVDLNRCEPWELPDEAKMG 79
           K+    LPPGFRFHPTDEELI++YL +K+    NF G  IA+VDLN+ EPWELP++AKMG
Sbjct: 10  KKEEEALPPGFRFHPTDEELISYYLVNKI-ADQNFTGKAIADVDLNKSEPWELPEKAKMG 69

Query: 80  EKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSSSNGVKLGTKKTLVFYKGGA 139
            KEWYFFSLR RKYPTG+RTNRAT  GYWK TGKD++I +S+    +G KKTLVFY+G A
Sbjct: 70  GKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSTTSELVGMKKTLVFYRGRA 129

Query: 140 PRGTKTKW------------------DEWVLCRIIHKSGEKTKPRSFQQQQTCHQESS 180
           PRG KT W                  DEWV+CR+  K+    K  S     T H  ++
Sbjct: 130 PRGEKTCWVMHEYRLHSKSSYRTSKQDEWVVCRVFKKTEATKKYISTSSSSTSHHHNN 186

[Close]

BLAST of Cp4.1LG11g07710.1 vs. TAIR 10
Match: AT2G24430.2 (NAC domain containing protein 38 )

HSP 1 Score: 197.2 bits (500), Expect = 1.9e-50
Identity = 96/178 (53.93%), Postives = 117/178 (65.73%), Query Frame = 0


Query: 20  KERHRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIAEVDLNRCEPWELPDEAKMG 79
           K+    LPPGFRFHPTDEELI++YL +K+    NF G  IA+VDLN+ EPWELP++AKMG
Sbjct: 10  KKEEEALPPGFRFHPTDEELISYYLVNKI-ADQNFTGKAIADVDLNKSEPWELPEKAKMG 69

Query: 80  EKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSSSNGVKLGTKKTLVFYKGGA 139
            KEWYFFSLR RKYPTG+RTNRAT  GYWK TGKD++I +S+    +G KKTLVFY+G A
Sbjct: 70  GKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSTTSELVGMKKTLVFYRGRA 129

Query: 140 PRGTKTKW------------------DEWVLCRIIHKSGEKTKPRSFQQQQTCHQESS 180
           PRG KT W                  DEWV+CR+  K+    K  S     T H  ++
Sbjct: 130 PRGEKTCWVMHEYRLHSKSSYRTSKQDEWVVCRVFKKTEATKKYISTSSSSTSHHHNN 186

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g07710.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S851	4.2e-58	49.40	Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana OX=3702 GN=NAC031 PE=1 SV...	[more]
Q9FRV4	4.2e-50	61.49	Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana OX=3702 GN=NAC054 PE=1 SV...	[more]
A2WJP3	6.1e-49	40.91	NAC domain-containing protein 20 OS=Oryza sativa subsp. indica OX=39946 GN=NAC20...	[more]
Q9FTY0	8.0e-49	40.91	NAC domain-containing protein 20 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC...	[more]
O04017	5.7e-47	48.90	Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana OX=3702 GN=NAC098 PE=1 SV...	[more]

BLAST of Cp4.1LG11g07710.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023546040.1	4.16e-233	94.53	protein CUP-SHAPED COTYLEDON 3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022946380.1	6.09e-226	92.40	protein CUP-SHAPED COTYLEDON 3-like [Cucurbita moschata] >KAG6599086.1 Protein C...	[more]
XP_022999737.1	1.08e-219	90.27	protein CUP-SHAPED COTYLEDON 3-like [Cucurbita maxima]	[more]
KAG7030023.1	1.33e-211	95.67	Protein CUP-SHAPED COTYLEDON 3, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_008464817.1	4.56e-154	68.88	PREDICTED: protein CUP-SHAPED COTYLEDON 3 isoform X2 [Cucumis melo] >KAA0045409....	[more]

BLAST of Cp4.1LG11g07710.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G3P2	2.95e-226	92.40	protein CUP-SHAPED COTYLEDON 3-like OS=Cucurbita moschata OX=3662 GN=LOC11145045...	[more]
A0A6J1KBM6	5.24e-220	90.27	protein CUP-SHAPED COTYLEDON 3-like OS=Cucurbita maxima OX=3661 GN=LOC111493995 ...	[more]
A0A5A7TVZ6	2.21e-154	68.88	Protein CUP-SHAPED COTYLEDON 3 isoform X2 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3CMG2	2.21e-154	68.88	protein CUP-SHAPED COTYLEDON 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10350260...	[more]
A0A1S3CMC2	3.25e-154	68.68	protein CUP-SHAPED COTYLEDON 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10350260...	[more]

BLAST of Cp4.1LG11g07710.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76420.1	3.0e-59	49.40	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]
AT3G18400.1	1.0e-51	48.46	NAC domain containing protein 58	[more]
AT3G15170.1	3.0e-51	61.49	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]
AT2G24430.1	1.9e-50	53.93	NAC domain containing protein 38	[more]
AT2G24430.2	1.9e-50	53.93	NAC domain containing protein 38	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 4..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..185
None	No IPR available	PANTHER	PTHR31744	PROTEIN CUP-SHAPED COTYLEDON 2-RELATED	coord: 18..147
None	No IPR available	PANTHER	PTHR31744	PROTEIN CUP-SHAPED COTYLEDON 2-RELATED	coord: 148..220
None	No IPR available	PANTHER	PTHR31744:SF86	PROTEIN CUP-SHAPED COTYLEDON 3	coord: 148..220 coord: 18..147
IPR036093	NAC domain superfamily	GENE3D	2.170.150.80	NAC domain	coord: 35..147 e-value: 4.2E-40 score: 139.1
IPR036093	NAC domain superfamily	SUPERFAMILY	101941	NAC domain	coord: 25..158
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 27..151 e-value: 6.5E-32 score: 111.1
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 26..170 score: 44.352779

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG11g07710	Cp4.1LG11g07710	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG11g07710.1:five_prime_utr:001	Cp4.1LG11g07710.1:five_prime_utr:001	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG11g07710.1:exon:001	Cp4.1LG11g07710.1:exon:001	exon
Cp4.1LG11g07710.1:exon:002	Cp4.1LG11g07710.1:exon:002	exon
Cp4.1LG11g07710.1:exon:003	Cp4.1LG11g07710.1:exon:003	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG11g07710.1:cds:001	Cp4.1LG11g07710.1:cds:001	CDS
Cp4.1LG11g07710.1:cds:002	Cp4.1LG11g07710.1:cds:002	CDS
Cp4.1LG11g07710.1:cds:003	Cp4.1LG11g07710.1:cds:003	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG11g07710.1:three_prime_utr:001	Cp4.1LG11g07710.1:three_prime_utr:001	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG11g07710.1	Cp4.1LG11g07710.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding