Cp4.1LG10g07890.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG10g07890.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	chlorophyll synthase, chloroplastic
Location	Cp4.1LG10: 5428362 .. 5433636 (+)
Sequence length	1434
RNA-Seq Expression	Cp4.1LG10g07890.1
Synteny	Cp4.1LG10g07890.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATCTTAGAGTCTTAGTGGGAGTTCCAAGAAGCACTGGAGATAGTGCTTCAATGGCGTTGACGCTGAATACAGCTCCATTTGTGAGATCATCGAGCATCCAAGCCAATCGAGTTCGAAATCAGTATGCTCTATCGCCGGTTTCTGTTTCGTTTTCTAGTGAGTTCACTCTGTAATGCATCAACAGTTTCTGAAAACAACATAAATGAATATACATTGATATCCAAGAGCTTTGAAATCGAAGAATGAAACTCTGTGTTACGTGCATGACTGTTCTGAGTTTCTTGTTATTCTTCACGGACTTCTCTGGCTTCAATGCCGATTTTGAGATATCATGTGCTAATTCTTTTTATATTAGTAACGACGGATTGTTCATTTTTCCAGGAAGGAGACTATCGGTTATTGCCGCTGAAACTGACAAGAATGAAGGTCTTTCATGCGTTTTTTTTTTTTTTTTTTTCGTTTTGCTTCCTTTTTAATGTGGACCAGGGGAATACTCTGAATCTTGCAGTGTAGATTTCTCAAAACTTTAGAAACGATTAAATTTGAGCTGCTTTATTTATTTTTTTTCTTTTCATGATTTTCTGCTTATTTATATTTTGCTTATTCGCTTTGATCAGTTAAATCTCAGGCACCAGATAAAGCGCCGGCGAGTGGTGGTTCGAGCTTCAATCAGCTTCTTGGAATTAAAGGTGCTGCGCTAGAAACTGTGAGTTACCATGTCCTAAGCTTGTTTTTTAGGAAGATTTTAATGTACATATCACAGTAAGTCGTTAATAAGTTCTTCATGTCATTTATGCAGAATAAATGGAAGATTCGTCTTCAATTGACAAAGCCTGTTACATGGCCGCCCTTGGTTTGGGGAGTAGTGTGTGGAGCTGCTGCTTCTGGTAATCAAATTCTACATAATAAGACATTAAAATTGAATTTGAAAAGTTTTTGATGAATCACTAACACATATTACCGTCAACTTATGTCTTAGTCGTCTGATGATGAGAGTGAGTTCTTCTCTGATAAGAACTTTAAGATCTACTCTCATGTTGTGTATTATATGGTCTAATGCATCAATGGTGGTCAAAGGAGTGATTACACGTAGAGATAAATTAGGGATAGGACTAACTGACCTTTTTTCTGCTTCATTGATTAGTTACCTCACTGAATCATTGAATATGCCTTCAATGATACATGCTTTTTTTCACAGGTAACTTCCATTGGAATTTCGAGGATGTGGCTAAATCAATTACTTGCATGCTTATGTCTGGTCCATTTCTCACTGGCTACACGCAGGTAAACTCTTTTTAATGTAAAGCTTTCCTATGACTTATGAAAGTATTATTCATGCACAAATAAAATAGAACTGGTACTTTGGTTTTTTTAGACGATCAATGATTGGTATGATCGAGAAATTGATGCAATTAATGAACCTTATCGTCCAATCCCATCTGGGGCAATATCTGAGAATGAGGTATGAGCTAAACCACTTGATATTCATTAGCAAAGGCATATTATCCTTCCTTAATGGTTTCTTCCTTCCATAAATTTTATCAGGTTATGGCACAAATATGGGTGTTGCTTCTGGGAGGACTTGGCTTGGCTGGTTTGTTAGATGTGTGGGTAGGTTCATTGAATTGATAGAACATACTCATCTTTCATATGTATTGTTTTTCCTGAATTTCGTTCTTATCCTTCTTAGGCAGGGCATGACTTTCCTATAGTCTTCTACCTTGCTCTGGGTGGCTCTTTGTTATCATACATATACTCTGCTCCACCTCTAAAGGTAAGTCAAAGGTTTTTGTTTCTAAAATTGGATCTTCTGAATGATAAGAGCATTTATTTTGTGGTTGCAGCTTAAACAAAATGGATGGATTGGAAATTGTGCTCTTGGAGCTAGTTATATCAGTTTACCATGGTGCGAAATCCTGTGATCTTTAGTAATTGGTAAATTGATATACATTGGTAGTGAATAAAAATGTCACCGAAATTACTGCAATTGACAGGTCGACAAAGTCAATTGCGTTTCATATGAAAATTTGAAAGCTTTCTTCGTATCTCTGGTCAGTGATTAATATTCACACTCATTTGAATGGCCTTGGACTTTTGAGCATATTGTTATCCTATGGGCAAAAGCTGATCAAAGGAGAACATCCTTTCTCTATTGACCATGAAATCTAATGTTATGATTACACTTTATCCACACAAATTTAGATAATGAATACTTTATAAACTTCTAATGCACTTCGAGTGGAACCACGTGTGTCGAACTTGAATCCTATACATGGAACGTCCAATCGATGGCTAGTTTGCAGTTATCTTCAATTTATTGTTTATATAAAGTTAATTGGATTGTTCCAGGCTCTACAATAATCATATGTATTACAAAATTTTCTCTGTTCTTTATAATATGATAAGTTTTCCCTTTCCAGTAACAGCTAATTTTTAATCTCAGGTGGGCAGGTCAAGCTTTATTTGGAACACTCGCTCCTGATATTGTGGTTCTTACACTCTTGTACAGCATAGCTGGAGTACGCTCAATTTATTTTTTGAGTTCCTACTTTCACAAAATCCAATACTAATGCGACTGCCTTCTGATTTGCCTTAACCAGTTTGGAATAGGCATTGTAAATGATTTCAAAAGTGTTGAGGGGGATAGAGCTTTAGGACTTCAGGTATTTCATTCTAAAACAGTCTTTGATTTGTAAAACTAATTTTGGTCTTATTAGATTCTTTTTGTTTTGTTATTCTATTGTCAGCTTTTATTGTTTACTGCTCTTACAGTCACTTCCAGTAGCTTTTGGTGCTGAAACTGCTAAATGGATTTGCGTTGGCGCTATTGACATAACTCAATTATCTGTTGCTGGTAATTCTTTTAGCACTGTTTTATTCAAGGGGTCTTCACTTTAAATCCATGCGCAAAATTAAGGTCACCAGACCATTGAAAAATAAGAACATAAGTTGATCATTTCTTGGCTTCTGCCTGTCTGGTAATTTACATTTTGTAGGGTCTTCACCATGTTTGAGTTTCATCTTTTCGTACATGCACCCTTCTATTGAATTTTGTAATAGTTGTGCTCTTCTATAATATCGAACCACCTCCAATGTGCCTACATCTATTAAGCTTTGTTAGCCACCGAAGGAATTGAGCAATGTTGAAAGTACTGCAGATGATATCTCTGATTCTCAACGTAACAATTAACTGAGATAAGGATAAGAATCCCAAAAGTTTGTTTGCAACAAGCGAATATTTAATATTCTGCATTCTGATTGTTGGAAAGATAGATTGCTCGATCTCTCTTTGCCTTCTCTACCAAAATAATATTCCTGAATGCCAAGGTCTGAAAGATGGTGTTCTATGAACTGCATTCTTGAAGGAAACTGTTAGGAAACATGAATCTCTACGATGGTATGATATTGTCCACTTTGAGCATAAGCTATCGCGGCTTTGTTTTTTGTTTTCTCCAAAAGGTCTCATGCCAATTGAGATGTATTCTTTACTTAAAAATCCATGATCATTCTCTAAATTAGCCAACGTGGGACTTCCCACTTTCCTCCACAAAAACCATATATGGGTCTCTCATACTAAAGGCTTAAAAGCTATCATCCTGCCATGTGTATAAAATGAAAATTGCTATTTATTTGCGATGTAGATCCAGAAATCATAAGGACTAGAATCGGGACTTTGATCTGCAAGCTAATTACACTGTTCCCTCTACCATATTTGACATGAACGTGACCGCAAATACTATTACTTATTGCAGGTTATCTGTTGGGAGCTGGCAAGCCGTATTATGCATTAGCCCTCCTTGCTCTAATTGCTCCCCAAGTTTTTTTCCAGGTATATACTTTTAAAGAAACGTCATATGGTGTCAGTTTTCTCTTAAGTAGGCAGCCGCTGCTGAACAACTGTCTAGTAATGTAAGGGGGTATTATTTGGTATTCAAGTATTGGGATGTAAATTGTGATCCCATCTCTTTCTATTTTCTTTAATTATAATTGAATAGTTGTGTTTGATTCGACAATCAGCCTTCTAGCTGAACTTTCCTTTTAGTTGCAACGAACATTAATACTCGACTAATGCATTCTATTATGGTTTTTGCAGTTCAAATACTTTCTCAAGGACCCCGTCAAGTACGATGTCAAATATCAGGTACTCAAATTCTTCTTTAAAGTGTAGAATTGCGTTCATAGAAACTGCTATATAGAGCCGTTTCTCTCTGTGCTATTTGTCAAAGCATTATCGTTCTGCCCTATCCAACAACTTTAAGTGGTCCGAACCCCATGACGTCCATAATCGTGTACCTACCTGCCACTACCACGCCAGATTTGTCAGCTTCTTTATACTTCTTTATATTTCTTTTTACAGATTTTGTTGGGTTGAGTTGAGATTTTTATATCNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCAATTAAATAGTTTATTCAAATNACCATTTCTAAAACACTTTTTCCAAACATGGCCAAGGCTCACTTAAACGTCCAGAATAACTGATCAAAAAAATAATTATGTTATTAAGTATATATATATATATTTTAAATGAATAATTATTAATAAATTTGAATGGGTTTATTTTAGTATAATTCATAAACTACCCAACCAACCCACCCAACCCATGATTGAATTGANTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACTTTTTTTTCAATTTACGTTTGCATTAACATTTCAGGCCAGTGCCCAGCCATTTCTTGTGCTGGGGCTGTTGATCACTGCTCTTGCAACCAGCCATTGAACTCTAGCATGCGGAAAATCAAACGTACGTACACGTACAGACATGCGTGACAAACGCAATGCCAGCAAGAGCAGACAGCAAAGTCTGCAGACTACCCCAGCAGCAGCCAGACCAAGTCAGGTTACATTCGCCTGGTTTGGTAAACCAGTTTTGGATCTCTATCAGCATATTTCAAAGCTTTGATTTAGGATTGTGTCACAATAAGGTCTTATTTAACGATTAAAGTAGGAACAAAATTTCCTCAGTTCTTCAAAGCCTTCAACAGATTTAGTTTGTGCATTACACGTGAATTTTCTCGGTTTCTAATGAGATACGTCTCCTTACTTCAGGTTGCAATTGAATCAGAATATGCATACATACTGGAATTCTGTTCTCTTGCTTCCGGCTGGCTCATATATTTTTCAGGTCGGCCAACCAACTATGCTGGCTTAAATTTCT

mRNA sequence

GATCTTAGAGTCTTAGTGGGAGTTCCAAGAAGCACTGGAGATAGTGCTTCAATGGCGTTGACGCTGAATACAGCTCCATTTGTGAGATCATCGAGCATCCAAGCCAATCGAGTTCGAAATCAGTATGCTCTATCGCCGGTTTCTGTTTCGTTTTCTAGAAGGAGACTATCGGTTATTGCCGCTGAAACTGACAAGAATGAAGGTAACTTCCATTGGAATTTCGAGGATGTGGCTAAATCAATTACTTGCATGCTTATGTCTGGTCCATTTCTCACTGGCTACACGCAGACGATCAATGATTGGTATGATCGAGAAATTGATGCAATTAATGAACCTTATCGTCCAATCCCATCTGGGGCAATATCTGAGAATGAGGTTATGGCACAAATATGGGTGTTGCTTCTGGGAGGACTTGGCTTGGCTGGTTTGTTAGATGTGTGGGCAGGGCATGACTTTCCTATAGTCTTCTACCTTGCTCTGGGTGGCTCTTTGTTATCATACATATACTCTGCTCCACCTCTAAAGCTTAAACAAAATGGATGGATTGGAAATTGTGCTCTTGGAGCTAGTTATATCAGTTTACCATGGTGGGCAGGTCAAGCTTTATTTGGAACACTCGCTCCTGATATTGTGGTTCTTACACTCTTGTACAGCATAGCTGGATTTGGAATAGGCATTGTAAATGATTTCAAAAGTGTTGAGGGGGATAGAGCTTTAGGACTTCAGTCACTTCCAGTAGCTTTTGGTGCTGAAACTGCTAAATGGATTTGCGTTGGCGCTATTGACATAACTCAATTATCTGTTGCTGGTTATCTGTTGGGAGCTGGCAAGCCGTATTATGCATTAGCCCTCCTTGCTCTAATTGCTCCCCAAGTTTTTTTCCAGTTCAAATACTTTCTCAAGGACCCCGTCAAGTACGATGTCAAATATCAGGCCAGTGCCCAGCCATTTCTTGTGCTGGGGCTGTTGATCACTGCTCTTGCAACCAGCCATTGAACTCTAGCATGCGGAAAATCAAACGTACGTACACGTACAGACATGCGTGACAAACGCAATGCCAGCAAGAGCAGACAGCAAAGTCTGCAGACTACCCCAGCAGCAGCCAGACCAAGTCAGGTTACATTCGCCTGGTTTGGTAAACCAGTTTTGGATCTCTATCAGCATATTTCAAAGCTTTGATTTAGGATTGTGTCACAATAAGGTCTTATTTAACGATTAAAGTAGGAACAAAATTTCCTCAGTTCTTCAAAGCCTTCAACAGATTTAGTTTGTGCATTACACGTGAATTTTCTCGGTTTCTAATGAGATACGTCTCCTTACTTCAGGTTGCAATTGAATCAGAATATGCATACATACTGGAATTCTGTTCTCTTGCTTCCGGCTGGCTCATATATTTTTCAGGTCGGCCAACCAACTATGCTGGCTTAAATTTCT

Coding sequence (CDS)

GATCTTAGAGTCTTAGTGGGAGTTCCAAGAAGCACTGGAGATAGTGCTTCAATGGCGTTGACGCTGAATACAGCTCCATTTGTGAGATCATCGAGCATCCAAGCCAATCGAGTTCGAAATCAGTATGCTCTATCGCCGGTTTCTGTTTCGTTTTCTAGAAGGAGACTATCGGTTATTGCCGCTGAAACTGACAAGAATGAAGGTAACTTCCATTGGAATTTCGAGGATGTGGCTAAATCAATTACTTGCATGCTTATGTCTGGTCCATTTCTCACTGGCTACACGCAGACGATCAATGATTGGTATGATCGAGAAATTGATGCAATTAATGAACCTTATCGTCCAATCCCATCTGGGGCAATATCTGAGAATGAGGTTATGGCACAAATATGGGTGTTGCTTCTGGGAGGACTTGGCTTGGCTGGTTTGTTAGATGTGTGGGCAGGGCATGACTTTCCTATAGTCTTCTACCTTGCTCTGGGTGGCTCTTTGTTATCATACATATACTCTGCTCCACCTCTAAAGCTTAAACAAAATGGATGGATTGGAAATTGTGCTCTTGGAGCTAGTTATATCAGTTTACCATGGTGGGCAGGTCAAGCTTTATTTGGAACACTCGCTCCTGATATTGTGGTTCTTACACTCTTGTACAGCATAGCTGGATTTGGAATAGGCATTGTAAATGATTTCAAAAGTGTTGAGGGGGATAGAGCTTTAGGACTTCAGTCACTTCCAGTAGCTTTTGGTGCTGAAACTGCTAAATGGATTTGCGTTGGCGCTATTGACATAACTCAATTATCTGTTGCTGGTTATCTGTTGGGAGCTGGCAAGCCGTATTATGCATTAGCCCTCCTTGCTCTAATTGCTCCCCAAGTTTTTTTCCAGTTCAAATACTTTCTCAAGGACCCCGTCAAGTACGATGTCAAATATCAGGCCAGTGCCCAGCCATTTCTTGTGCTGGGGCTGTTGATCACTGCTCTTGCAACCAGCCATTGA

Protein sequence

DLRVLVGVPRSTGDSASMALTLNTAPFVRSSSIQANRVRNQYALSPVSVSFSRRRLSVIAAETDKNEGNFHWNFEDVAKSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVMAQIWVLLLGGLGLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNCALGASYISLPWWAGQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLPVAFGAETAKWICVGAIDITQLSVAGYLLGAGKPYYALALLALIAPQVFFQFKYFLKDPVKYDVKYQASAQPFLVLGLLITALATSH

Homology

[Close]

BLAST of Cp4.1LG10g07890.1 vs. ExPASy Swiss-Prot
Match: Q5W6H5 (Chlorophyll synthase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CHLG PE=2 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 7.7e-135
Identity = 233/264 (88.26%), Postives = 241/264 (91.29%), Query Frame = 0


Query: 68  GNFHWNFEDVAKSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVM 127
           GNFHW  EDVAKSI CM+MSGP LTGYTQTINDWYDR+IDAINEPYRPIPSGAISENEV+
Sbjct: 113 GNFHWTVEDVAKSIVCMIMSGPCLTGYTQTINDWYDRDIDAINEPYRPIPSGAISENEVI 172

Query: 128 AQIWVLLLGGLGLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNCAL 187
            QIW LLL GLGL  LLDVWAGHDFPI+FYLA+GGSLLSYIYSAPPLKLKQNGWIGN AL
Sbjct: 173 TQIWALLLAGLGLGALLDVWAGHDFPIIFYLAVGGSLLSYIYSAPPLKLKQNGWIGNFAL 232

Query: 188 GASYISLPWWAGQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLPVA 247
           GASYI LPWWAGQALFGTL PDIVVLT LYSIAG GI IVNDFKSVEGDRALGLQSLPVA
Sbjct: 233 GASYIGLPWWAGQALFGTLTPDIVVLTSLYSIAGLGIAIVNDFKSVEGDRALGLQSLPVA 292

Query: 248 FGAETAKWICVGAIDITQLSVAGYLLGAGKPYYALALLALIAPQVFFQFKYFLKDPVKYD 307
           FG ETAKWICVGAIDITQLSVAGYL  +GKPYYALALL L  PQV FQF+YFLKDPVKYD
Sbjct: 293 FGMETAKWICVGAIDITQLSVAGYLFSSGKPYYALALLGLTIPQVVFQFQYFLKDPVKYD 352

Query: 308 VKYQASAQPFLVLGLLITALATSH 332
           VKYQASAQPF VLGLL+TALATSH
Sbjct: 353 VKYQASAQPFFVLGLLVTALATSH 376

[Close]

BLAST of Cp4.1LG10g07890.1 vs. ExPASy Swiss-Prot
Match: Q38833 (Chlorophyll synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CHLG PE=2 SV=1)

HSP 1 Score: 481.1 bits (1237), Expect = 1.0e-134
Identity = 231/264 (87.50%), Postives = 245/264 (92.80%), Query Frame = 0


Query: 68  GNFHWNFEDVAKSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVM 127
           GNFHW  EDVAKSI CM+MSGP LTGYTQTINDWYDR+IDAINEPYRPIPSGAISE EV+
Sbjct: 124 GNFHWTPEDVAKSILCMMMSGPCLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEPEVI 183

Query: 128 AQIWVLLLGGLGLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNCAL 187
            Q+WVLLLGGLG+AG+LDVWAGH  P VFYLALGGSLLSYIYSAPPLKLKQNGW+GN AL
Sbjct: 184 TQVWVLLLGGLGIAGILDVWAGHTTPTVFYLALGGSLLSYIYSAPPLKLKQNGWVGNFAL 243

Query: 188 GASYISLPWWAGQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLPVA 247
           GASYISLPWWAGQALFGTL PD+VVLTLLYSIAG GI IVNDFKSVEGDRALGLQSLPVA
Sbjct: 244 GASYISLPWWAGQALFGTLTPDVVVLTLLYSIAGLGIAIVNDFKSVEGDRALGLQSLPVA 303

Query: 248 FGAETAKWICVGAIDITQLSVAGYLLGAGKPYYALALLALIAPQVFFQFKYFLKDPVKYD 307
           FG ETAKWICVGAIDITQLSVAGYLL +GKPYYALAL+ALI PQ+ FQFKYFLKDPVKYD
Sbjct: 304 FGTETAKWICVGAIDITQLSVAGYLLASGKPYYALALVALIIPQIVFQFKYFLKDPVKYD 363

Query: 308 VKYQASAQPFLVLGLLITALATSH 332
           VKYQASAQPFLVLG+ +TALA+ H
Sbjct: 364 VKYQASAQPFLVLGIFVTALASQH 387

[Close]

BLAST of Cp4.1LG10g07890.1 vs. ExPASy Swiss-Prot
Match: Q9M3W5 (Chlorophyll synthase, chloroplastic OS=Avena sativa OX=4498 GN=CHLG PE=1 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 5.5e-133
Identity = 230/264 (87.12%), Postives = 237/264 (89.77%), Query Frame = 0


Query: 68  GNFHWNFEDVAKSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVM 127
           GNFHW  EDV KSI CMLMSGP LTGYTQTINDWYDR+IDAINEPYRPIPSGAISENEV+
Sbjct: 115 GNFHWTVEDVTKSIVCMLMSGPCLTGYTQTINDWYDRDIDAINEPYRPIPSGAISENEVI 174

Query: 128 AQIWVLLLGGLGLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNCAL 187
            QIWVLLLGGLGL  LLD+WAGHDFPI+FYLALGGSLLSYIYSAPPLKLKQNGWIGN AL
Sbjct: 175 TQIWVLLLGGLGLGALLDIWAGHDFPIIFYLALGGSLLSYIYSAPPLKLKQNGWIGNFAL 234

Query: 188 GASYISLPWWAGQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLPVA 247
           GASYI LPWWAGQALFGTL PDIVVLT LYSIAG GI IVNDFKS+EGDR LGLQSLPVA
Sbjct: 235 GASYIGLPWWAGQALFGTLTPDIVVLTCLYSIAGLGIAIVNDFKSIEGDRTLGLQSLPVA 294

Query: 248 FGAETAKWICVGAIDITQLSVAGYLLGAGKPYYALALLALIAPQVFFQFKYFLKDPVKYD 307
           FG ETAKWICVGAIDITQLSVA YLL  GK YYALALL L  PQV  QF+YFLKDPVKYD
Sbjct: 295 FGMETAKWICVGAIDITQLSVAAYLLSTGKLYYALALLGLTIPQVILQFQYFLKDPVKYD 354

Query: 308 VKYQASAQPFLVLGLLITALATSH 332
           VKYQASAQPF V GLL+TALATSH
Sbjct: 355 VKYQASAQPFFVFGLLVTALATSH 378

[Close]

BLAST of Cp4.1LG10g07890.1 vs. ExPASy Swiss-Prot
Match: P33326 (Bacteriochlorophyll synthase 34 kDa chain OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) OX=324602 GN=bchG PE=4 SV=2)

HSP 1 Score: 168.7 bits (426), Expect = 1.1e-40
Identity = 99/260 (38.08%), Postives = 145/260 (55.77%), Query Frame = 0


Query: 68  GNFHWNFEDVAKSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVM 127
           G   WN E + + +  M M+GP L G +Q +ND+ DRE+DAINEP+R IPSG +S   V 
Sbjct: 56  GALGWN-ESIGRLLLGMFMAGPILCGLSQVVNDYADREVDAINEPHRLIPSGQVSLRHVY 115

Query: 128 AQIWVLLLGGLGLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNCAL 187
               VL   G  +A    ++ G    + F++AL G + +  YS  P++ K+NGWIGN  +
Sbjct: 116 ILTAVLTWIGASIA----LFLGRQ--VAFFVAL-GLVFALAYSLRPIRGKRNGWIGNALV 175

Query: 188 GASYISLPWWAGQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLPVA 247
             SY  L W AG A F  L  + V + LLYS+   GI  VNDFKS+ GD  +G++S+PV 
Sbjct: 176 AISYEGLAWMAGHAAFAPLTGESVTIALLYSLGAHGIMTVNDFKSIRGDTIMGIRSIPVQ 235

Query: 248 FGAETAKWICVGAIDITQLSVAGYLLGAGKPYYALALLALIAPQVFFQFKYFLKDPVKYD 307
           +G   A  + V  + + Q++V G L   G P  A  +  L+A Q     + F++DP   +
Sbjct: 236 YGKVMAARMVVTTMGVAQIAVIGLLFHWGHPVAATVVAILLAAQSIPNAR-FIRDPENNE 295

Query: 308 VKYQASAQPFLVLGLLITAL 328
           V + A+A    V G+L  A+
Sbjct: 296 VFFNATAIMLYVWGMLAAAI 306

[Close]

BLAST of Cp4.1LG10g07890.1 vs. ExPASy Swiss-Prot
Match: P26170 (Bacteriochlorophyll synthase 33 kDa chain OS=Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003) OX=272942 GN=bchG PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 9.1e-35
Identity = 90/251 (35.86%), Postives = 134/251 (53.39%), Query Frame = 0


Query: 84  MLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVMAQIWVLLLG-GLGLAG 143
           ++++GP + G +Q  NDW DR +DAINEP+RPIPSG I        +W L +   + L  
Sbjct: 57  IVLAGPIVCGMSQAANDWCDRHVDAINEPHRPIPSGRI------PGLWGLYIAIAMSLLS 116

Query: 144 LLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNCALGASYISLPWWAGQAL 203
           L+  W    +   F   L G   ++ YS  P++LK++GW G   +G +Y  LPW  G A+
Sbjct: 117 LVVGWQLGSWG--FVATLLGVAAAWAYSVEPIRLKRSGWWGPGLVGLAYEGLPWITGAAV 176

Query: 204 FGTLAP-----DIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLPVAFGAETAKWIC 263
               A       IV++  LY++   GI  +NDFK++EGDR LG++SLP  +G E A  I 
Sbjct: 177 LLATADTSPGFPIVMMATLYALGAHGIMTINDFKAIEGDRKLGIKSLPAVYGPEVAAKIA 236

Query: 264 VGAIDITQLSVAGYLLGAGKPYYALALLALIAPQVFFQFKYFLKDPVKYDVKYQASAQPF 323
              + + Q  V   L    KPY+A A+L L+  Q F+    +++DP      Y  +    
Sbjct: 237 CTVMGLAQALVITMLYLFSKPYHATAVLVLLCGQ-FWAMSVWMRDPEGKAPWYNGTGVVM 296

Query: 324 LVLGLLITALA 329
            V G++ITA A
Sbjct: 297 YVSGMMITAFA 298

[Close]

BLAST of Cp4.1LG10g07890.1 vs. NCBI nr
Match: KAG7033765.1 (Chlorophyll synthase, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 601 bits (1549), Expect = 3.10e-215
Identity = 307/328 (93.60%), Postives = 309/328 (94.21%), Query Frame = 0


Query: 1   DLRVLVGVPRSTGDSASMALTLNTAPFVRSSSIQANRVRNQYALSPVSVSFSR------- 60
           DLRVLVGVPRSTGDSASMALTLNTA FVRSSSIQANRVR QYALSPVSVSFS        
Sbjct: 1   DLRVLVGVPRSTGDSASMALTLNTASFVRSSSIQANRVRIQYALSPVSVSFSSEFTLNDG 60

Query: 61  ------RRLSVIAAETDKNEGNFHWNFEDVAKSITCMLMSGPFLTGYTQTINDWYDREID 120
                 RRLSVIAAETDKNEGNFHWNFEDVAKSITCMLMSGPFLTGYTQTINDWYDREID
Sbjct: 61  LFIFPGRRLSVIAAETDKNEGNFHWNFEDVAKSITCMLMSGPFLTGYTQTINDWYDREID 120

Query: 121 AINEPYRPIPSGAISENEVMAQIWVLLLGGLGLAGLLDVWAGHDFPIVFYLALGGSLLSY 180
           AINEPYRPIPSGAISENEVMAQIWVLLLGGLGLAGLLDVWAGHDFPIVFYLALGGSLLSY
Sbjct: 121 AINEPYRPIPSGAISENEVMAQIWVLLLGGLGLAGLLDVWAGHDFPIVFYLALGGSLLSY 180

Query: 181 IYSAPPLKLKQNGWIGNCALGASYISLPWWAGQALFGTLAPDIVVLTLLYSIAGFGIGIV 240
           IYSAPPLKLKQNGWIGNCALGASYISLPWWAGQALFGTLAPDIVVLTLLYSIAGFGIGIV
Sbjct: 181 IYSAPPLKLKQNGWIGNCALGASYISLPWWAGQALFGTLAPDIVVLTLLYSIAGFGIGIV 240

Query: 241 NDFKSVEGDRALGLQSLPVAFGAETAKWICVGAIDITQLSVAGYLLGAGKPYYALALLAL 300
           NDFKSVEGDRALGLQSLPVAFGAETAKWICVGAIDITQLSVAGYL GAGKPYYALALLAL
Sbjct: 241 NDFKSVEGDRALGLQSLPVAFGAETAKWICVGAIDITQLSVAGYLWGAGKPYYALALLAL 300

Query: 301 IAPQVFFQFKYFLKDPVKYDVKYQASAQ 315
           IAPQVFFQFKYFLKDPVKYDVKYQ + +
Sbjct: 301 IAPQVFFQFKYFLKDPVKYDVKYQVAIE 328

[Close]

BLAST of Cp4.1LG10g07890.1 vs. NCBI nr
Match: XP_023543339.1 (chlorophyll synthase, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 597 bits (1540), Expect = 1.31e-213
Identity = 314/373 (84.18%), Postives = 314/373 (84.18%), Query Frame = 0


Query: 18  MALTLNTAPFVRSSSIQANRVRNQYALSPVSVSFSRRRLSVIAAETDKNE---------- 77
           MALTLNTAPFVRSSSIQANRVRNQYALSPVSVSFSRRRLSVIAAETDKNE          
Sbjct: 1   MALTLNTAPFVRSSSIQANRVRNQYALSPVSVSFSRRRLSVIAAETDKNEVKSQAPDKAP 60

Query: 78  -------------------------------------------------GNFHWNFEDVA 137
                                                            GNFHWNFEDVA
Sbjct: 61  ASGGSSFNQLLGIKGAALETNKWKIRLQLTKPVTWPPLVWGVVCGAAASGNFHWNFEDVA 120

Query: 138 KSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVMAQIWVLLLGGL 197
           KSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVMAQIWVLLLGGL
Sbjct: 121 KSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVMAQIWVLLLGGL 180

Query: 198 GLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNCALGASYISLPWWA 257
           GLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNCALGASYISLPWWA
Sbjct: 181 GLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNCALGASYISLPWWA 240

Query: 258 GQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLPVAFGAETAKWICV 317
           GQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLPVAFGAETAKWICV
Sbjct: 241 GQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLPVAFGAETAKWICV 300

Query: 318 GAIDITQLSVAGYLLGAGKPYYALALLALIAPQVFFQFKYFLKDPVKYDVKYQASAQPFL 331
           GAIDITQLSVAGYLLGAGKPYYALALLALIAPQVFFQFKYFLKDPVKYDVKYQASAQPFL
Sbjct: 301 GAIDITQLSVAGYLLGAGKPYYALALLALIAPQVFFQFKYFLKDPVKYDVKYQASAQPFL 360

[Close]

BLAST of Cp4.1LG10g07890.1 vs. NCBI nr
Match: XP_022978209.1 (chlorophyll synthase, chloroplastic [Cucurbita maxima])

HSP 1 Score: 589 bits (1518), Expect = 2.95e-210
Identity = 310/373 (83.11%), Postives = 311/373 (83.38%), Query Frame = 0


Query: 18  MALTLNTAPFVRSSSIQANRVRNQYALSPVSVSFSRRRLSVIAAETDKNE---------- 77
           MALTLNTAPFVRSSSIQANRVR QYALSPVSVSFSRRRL VIAAETDKNE          
Sbjct: 1   MALTLNTAPFVRSSSIQANRVRIQYALSPVSVSFSRRRLLVIAAETDKNEVKSQAPDKAP 60

Query: 78  -------------------------------------------------GNFHWNFEDVA 137
                                                            GNFHWNFEDVA
Sbjct: 61  ASGGSSFNQLLGIKGAALETNKWKIRLQLTKPVTWPPLVWGVVCGAAASGNFHWNFEDVA 120

Query: 138 KSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVMAQIWVLLLGGL 197
           KSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVMAQIWVLLLGGL
Sbjct: 121 KSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVMAQIWVLLLGGL 180

Query: 198 GLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNCALGASYISLPWWA 257
           GLAGLLDVWAGHD PIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNCALGASYISLPWWA
Sbjct: 181 GLAGLLDVWAGHDIPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNCALGASYISLPWWA 240

Query: 258 GQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLPVAFGAETAKWICV 317
           GQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLPVAFGAETAKWICV
Sbjct: 241 GQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLPVAFGAETAKWICV 300

Query: 318 GAIDITQLSVAGYLLGAGKPYYALALLALIAPQVFFQFKYFLKDPVKYDVKYQASAQPFL 331
           GAIDITQLSVAGYLLGAGKPYYALALLALIAPQVFFQFKYFLKDPVKYDVKYQASAQPFL
Sbjct: 301 GAIDITQLSVAGYLLGAGKPYYALALLALIAPQVFFQFKYFLKDPVKYDVKYQASAQPFL 360

[Close]

BLAST of Cp4.1LG10g07890.1 vs. NCBI nr
Match: XP_022949992.1 (chlorophyll synthase, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 586 bits (1511), Expect = 3.43e-209
Identity = 309/373 (82.84%), Postives = 310/373 (83.11%), Query Frame = 0


Query: 18  MALTLNTAPFVRSSSIQANRVRNQYALSPVSVSFSRRRLSVIAAETDKNE---------- 77
           MALTLNTA FVRSSSIQANRVR QYALSPVSVSFSRRRLSVIAAETDKNE          
Sbjct: 1   MALTLNTASFVRSSSIQANRVRIQYALSPVSVSFSRRRLSVIAAETDKNEVKSQAPDKAP 60

Query: 78  -------------------------------------------------GNFHWNFEDVA 137
                                                            GNFHWNFEDVA
Sbjct: 61  ASGGSSFNQLLGIKGAALETNKWKIRLQLTKPVTWPPLVWGVVCGAAASGNFHWNFEDVA 120

Query: 138 KSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVMAQIWVLLLGGL 197
           KSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVMAQIWVLLLGGL
Sbjct: 121 KSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVMAQIWVLLLGGL 180

Query: 198 GLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNCALGASYISLPWWA 257
           GLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNCALGASYISLPWWA
Sbjct: 181 GLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNCALGASYISLPWWA 240

Query: 258 GQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLPVAFGAETAKWICV 317
           GQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLPVAFGAETAKWICV
Sbjct: 241 GQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLPVAFGAETAKWICV 300

Query: 318 GAIDITQLSVAGYLLGAGKPYYALALLALIAPQVFFQFKYFLKDPVKYDVKYQASAQPFL 331
           GAIDITQLSVAGYL GAGKPYYALALLALIAPQVFFQFKYFLKDPVKYDVKYQASAQPFL
Sbjct: 301 GAIDITQLSVAGYLWGAGKPYYALALLALIAPQVFFQFKYFLKDPVKYDVKYQASAQPFL 360

[Close]

BLAST of Cp4.1LG10g07890.1 vs. NCBI nr
Match: KAG6595396.1 (Chlorophyll synthase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 569 bits (1466), Expect = 1.10e-202
Identity = 294/351 (83.76%), Postives = 301/351 (85.75%), Query Frame = 0


Query: 18  MALTLNTAPFVRSSSIQANRVRNQYALSPVSVSFSRRRLSVIAAETDKNE---------- 77
           MALTLNTAP +R SSIQANRVR    LSPVSVSFSRRRLSV+AAETD NE          
Sbjct: 1   MALTLNTAPSLRLSSIQANRVRFHSTLSPVSVSFSRRRLSVVAAETDANEVRHVHFVQNK 60

Query: 78  ---------------------------GNFHWNFEDVAKSITCMLMSGPFLTGYTQTIND 137
                                      GNFHWNFEDVAKSI CMLMSGPFLTGYTQTIND
Sbjct: 61  WKIRLQLTKPVTWPPLVWGVVCGAAASGNFHWNFEDVAKSIACMLMSGPFLTGYTQTIND 120

Query: 138 WYDREIDAINEPYRPIPSGAISENEVMAQIWVLLLGGLGLAGLLDVWAGHDFPIVFYLAL 197
           WYDREIDAINEPYRPIPSGAISENEV+ QIWVLLLGGLGLAGLLDVWAGHDFPIVFYLAL
Sbjct: 121 WYDREIDAINEPYRPIPSGAISENEVITQIWVLLLGGLGLAGLLDVWAGHDFPIVFYLAL 180

Query: 198 GGSLLSYIYSAPPLKLKQNGWIGNCALGASYISLPWWAGQALFGTLAPDIVVLTLLYSIA 257
           GGSLLSYIYSAPPLKLKQNGWIGN ALGASYISLPWWAGQALFGTL PDIVVLTLLYSIA
Sbjct: 181 GGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTLTPDIVVLTLLYSIA 240

Query: 258 GFGIGIVNDFKSVEGDRALGLQSLPVAFGAETAKWICVGAIDITQLSVAGYLLGAGKPYY 317
           G GI IVNDFKS+EGDRA+GLQSLPVAFGAETAKWICVGAIDITQLSVAGYLLGAGKPYY
Sbjct: 241 GLGIAIVNDFKSIEGDRAMGLQSLPVAFGAETAKWICVGAIDITQLSVAGYLLGAGKPYY 300

Query: 318 ALALLALIAPQVFFQFKYFLKDPVKYDVKYQASAQPFLVLGLLITALATSH 331
           ALALLALIAPQ+FFQFKYFLKDPVKYDVKYQASAQPFLVLGLL+TALATSH
Sbjct: 301 ALALLALIAPQIFFQFKYFLKDPVKYDVKYQASAQPFLVLGLLVTALATSH 351

[Close]

BLAST of Cp4.1LG10g07890.1 vs. ExPASy TrEMBL
Match: A0A6J1ITH4 (chlorophyll synthase, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111478261 PE=4 SV=1)

HSP 1 Score: 589 bits (1518), Expect = 1.43e-210
Identity = 310/373 (83.11%), Postives = 311/373 (83.38%), Query Frame = 0


Query: 18  MALTLNTAPFVRSSSIQANRVRNQYALSPVSVSFSRRRLSVIAAETDKNE---------- 77
           MALTLNTAPFVRSSSIQANRVR QYALSPVSVSFSRRRL VIAAETDKNE          
Sbjct: 1   MALTLNTAPFVRSSSIQANRVRIQYALSPVSVSFSRRRLLVIAAETDKNEVKSQAPDKAP 60

Query: 78  -------------------------------------------------GNFHWNFEDVA 137
                                                            GNFHWNFEDVA
Sbjct: 61  ASGGSSFNQLLGIKGAALETNKWKIRLQLTKPVTWPPLVWGVVCGAAASGNFHWNFEDVA 120

Query: 138 KSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVMAQIWVLLLGGL 197
           KSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVMAQIWVLLLGGL
Sbjct: 121 KSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVMAQIWVLLLGGL 180

Query: 198 GLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNCALGASYISLPWWA 257
           GLAGLLDVWAGHD PIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNCALGASYISLPWWA
Sbjct: 181 GLAGLLDVWAGHDIPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNCALGASYISLPWWA 240

Query: 258 GQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLPVAFGAETAKWICV 317
           GQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLPVAFGAETAKWICV
Sbjct: 241 GQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLPVAFGAETAKWICV 300

Query: 318 GAIDITQLSVAGYLLGAGKPYYALALLALIAPQVFFQFKYFLKDPVKYDVKYQASAQPFL 331
           GAIDITQLSVAGYLLGAGKPYYALALLALIAPQVFFQFKYFLKDPVKYDVKYQASAQPFL
Sbjct: 301 GAIDITQLSVAGYLLGAGKPYYALALLALIAPQVFFQFKYFLKDPVKYDVKYQASAQPFL 360

[Close]

BLAST of Cp4.1LG10g07890.1 vs. ExPASy TrEMBL
Match: A0A6J1GDL2 (chlorophyll synthase, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111453218 PE=4 SV=1)

HSP 1 Score: 586 bits (1511), Expect = 1.66e-209
Identity = 309/373 (82.84%), Postives = 310/373 (83.11%), Query Frame = 0


Query: 18  MALTLNTAPFVRSSSIQANRVRNQYALSPVSVSFSRRRLSVIAAETDKNE---------- 77
           MALTLNTA FVRSSSIQANRVR QYALSPVSVSFSRRRLSVIAAETDKNE          
Sbjct: 1   MALTLNTASFVRSSSIQANRVRIQYALSPVSVSFSRRRLSVIAAETDKNEVKSQAPDKAP 60

Query: 78  -------------------------------------------------GNFHWNFEDVA 137
                                                            GNFHWNFEDVA
Sbjct: 61  ASGGSSFNQLLGIKGAALETNKWKIRLQLTKPVTWPPLVWGVVCGAAASGNFHWNFEDVA 120

Query: 138 KSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVMAQIWVLLLGGL 197
           KSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVMAQIWVLLLGGL
Sbjct: 121 KSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVMAQIWVLLLGGL 180

Query: 198 GLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNCALGASYISLPWWA 257
           GLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNCALGASYISLPWWA
Sbjct: 181 GLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNCALGASYISLPWWA 240

Query: 258 GQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLPVAFGAETAKWICV 317
           GQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLPVAFGAETAKWICV
Sbjct: 241 GQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLPVAFGAETAKWICV 300

Query: 318 GAIDITQLSVAGYLLGAGKPYYALALLALIAPQVFFQFKYFLKDPVKYDVKYQASAQPFL 331
           GAIDITQLSVAGYL GAGKPYYALALLALIAPQVFFQFKYFLKDPVKYDVKYQASAQPFL
Sbjct: 301 GAIDITQLSVAGYLWGAGKPYYALALLALIAPQVFFQFKYFLKDPVKYDVKYQASAQPFL 360

[Close]

BLAST of Cp4.1LG10g07890.1 vs. ExPASy TrEMBL
Match: A0A6J1CS79 (chlorophyll synthase, chloroplastic isoform X2 OS=Momordica charantia OX=3673 GN=LOC111013846 PE=4 SV=1)

HSP 1 Score: 562 bits (1448), Expect = 6.53e-200
Identity = 295/373 (79.09%), Postives = 302/373 (80.97%), Query Frame = 0


Query: 18  MALTLNTAPFVRSSSIQANRVRNQYALSPVSVSFSRRRLSVIAAETDKNE---------- 77
           MALTLNTAP VR SS+ ANRVR Q ALSPVSVSFSRRRLS++AAETD NE          
Sbjct: 1   MALTLNTAPSVRLSSVHANRVRIQSALSPVSVSFSRRRLSIVAAETDANEVKPQAPDKAP 60

Query: 78  -------------------------------------------------GNFHWNFEDVA 137
                                                            GNFHWNFEDVA
Sbjct: 61  SNGGSSFNQLLGIKGAAQETNKWKIRLQLTKPVTWPPLVWGVVCGAAASGNFHWNFEDVA 120

Query: 138 KSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVMAQIWVLLLGGL 197
           KSI CMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEV+ QIWVLLLGGL
Sbjct: 121 KSIVCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVLLLGGL 180

Query: 198 GLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNCALGASYISLPWWA 257
           GLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGN ALGASYISLPWWA
Sbjct: 181 GLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWA 240

Query: 258 GQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLPVAFGAETAKWICV 317
           GQALFGTL PDIVVLTLLYSIAG GI IVNDFKSVEGDRALGLQSLPVAFGAETAKWICV
Sbjct: 241 GQALFGTLTPDIVVLTLLYSIAGLGIAIVNDFKSVEGDRALGLQSLPVAFGAETAKWICV 300

Query: 318 GAIDITQLSVAGYLLGAGKPYYALALLALIAPQVFFQFKYFLKDPVKYDVKYQASAQPFL 331
           GAIDITQLS+AGYLLGAGKPYYALALLALIAPQVFFQFK+FLKDPVKYDVKYQASAQPFL
Sbjct: 301 GAIDITQLSIAGYLLGAGKPYYALALLALIAPQVFFQFKFFLKDPVKYDVKYQASAQPFL 360

[Close]

BLAST of Cp4.1LG10g07890.1 vs. ExPASy TrEMBL
Match: A0A6J1CQL1 (chlorophyll synthase, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013846 PE=4 SV=1)

HSP 1 Score: 561 bits (1447), Expect = 9.61e-200
Identity = 295/374 (78.88%), Postives = 302/374 (80.75%), Query Frame = 0


Query: 18  MALTLNTAPFVRSSSIQANRVRNQYALSPVSVSFSRRRLSVIAAETDKNE---------- 77
           MALTLNTAP VR SS+ ANRVR Q ALSPVSVSFSRRRLS++AAETD NE          
Sbjct: 1   MALTLNTAPSVRLSSVHANRVRIQSALSPVSVSFSRRRLSIVAAETDANEVKPQAPDKAP 60

Query: 78  --------------------------------------------------GNFHWNFEDV 137
                                                             GNFHWNFEDV
Sbjct: 61  SNGGSSFNQLLGIKGAAQETQNKWKIRLQLTKPVTWPPLVWGVVCGAAASGNFHWNFEDV 120

Query: 138 AKSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVMAQIWVLLLGG 197
           AKSI CMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEV+ QIWVLLLGG
Sbjct: 121 AKSIVCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVLLLGG 180

Query: 198 LGLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNCALGASYISLPWW 257
           LGLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGN ALGASYISLPWW
Sbjct: 181 LGLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWW 240

Query: 258 AGQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLPVAFGAETAKWIC 317
           AGQALFGTL PDIVVLTLLYSIAG GI IVNDFKSVEGDRALGLQSLPVAFGAETAKWIC
Sbjct: 241 AGQALFGTLTPDIVVLTLLYSIAGLGIAIVNDFKSVEGDRALGLQSLPVAFGAETAKWIC 300

Query: 318 VGAIDITQLSVAGYLLGAGKPYYALALLALIAPQVFFQFKYFLKDPVKYDVKYQASAQPF 331
           VGAIDITQLS+AGYLLGAGKPYYALALLALIAPQVFFQFK+FLKDPVKYDVKYQASAQPF
Sbjct: 301 VGAIDITQLSIAGYLLGAGKPYYALALLALIAPQVFFQFKFFLKDPVKYDVKYQASAQPF 360

[Close]

BLAST of Cp4.1LG10g07890.1 vs. ExPASy TrEMBL
Match: A0A6J1EV65 (chlorophyll synthase, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111438198 PE=4 SV=1)

HSP 1 Score: 560 bits (1444), Expect = 2.65e-199
Identity = 294/373 (78.82%), Postives = 301/373 (80.70%), Query Frame = 0


Query: 18  MALTLNTAPFVRSSSIQANRVRNQYALSPVSVSFSRRRLSVIAAETDKNE---------- 77
           MALTLNTAP +R SSIQANRVR    LSPVSVSFSRRRLSV+AAETD NE          
Sbjct: 1   MALTLNTAPSLRLSSIQANRVRFHSTLSPVSVSFSRRRLSVVAAETDANEVKSQAPDKAP 60

Query: 78  -------------------------------------------------GNFHWNFEDVA 137
                                                            GNFHWNFEDVA
Sbjct: 61  ASGGSSFNQLLGIKGAAQETNKWKIRLQLTKPVTWPPLVWGVVCGAAASGNFHWNFEDVA 120

Query: 138 KSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVMAQIWVLLLGGL 197
           KSI CMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEV+ QIWVLLLGGL
Sbjct: 121 KSIACMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVITQIWVLLLGGL 180

Query: 198 GLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNCALGASYISLPWWA 257
           GLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGN ALGASYISLPWWA
Sbjct: 181 GLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWA 240

Query: 258 GQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLPVAFGAETAKWICV 317
           GQALFGTL PDIVVLTLLYSIAG GI IVNDFKS+EGDRA+GLQSLPVAFGAETAKWICV
Sbjct: 241 GQALFGTLTPDIVVLTLLYSIAGLGIAIVNDFKSIEGDRAMGLQSLPVAFGAETAKWICV 300

Query: 318 GAIDITQLSVAGYLLGAGKPYYALALLALIAPQVFFQFKYFLKDPVKYDVKYQASAQPFL 331
           GAIDITQLSVAGYLLGAGKPYYALALLALIAPQ+FFQFKYFLKDPVKYDVKYQASAQPFL
Sbjct: 301 GAIDITQLSVAGYLLGAGKPYYALALLALIAPQIFFQFKYFLKDPVKYDVKYQASAQPFL 360

[Close]

BLAST of Cp4.1LG10g07890.1 vs. TAIR 10
Match: AT3G51820.1 (UbiA prenyltransferase family protein )

HSP 1 Score: 481.1 bits (1237), Expect = 7.2e-136
Identity = 231/264 (87.50%), Postives = 245/264 (92.80%), Query Frame = 0


Query: 68  GNFHWNFEDVAKSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVM 127
           GNFHW  EDVAKSI CM+MSGP LTGYTQTINDWYDR+IDAINEPYRPIPSGAISE EV+
Sbjct: 124 GNFHWTPEDVAKSILCMMMSGPCLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEPEVI 183

Query: 128 AQIWVLLLGGLGLAGLLDVWAGHDFPIVFYLALGGSLLSYIYSAPPLKLKQNGWIGNCAL 187
            Q+WVLLLGGLG+AG+LDVWAGH  P VFYLALGGSLLSYIYSAPPLKLKQNGW+GN AL
Sbjct: 184 TQVWVLLLGGLGIAGILDVWAGHTTPTVFYLALGGSLLSYIYSAPPLKLKQNGWVGNFAL 243

Query: 188 GASYISLPWWAGQALFGTLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSLPVA 247
           GASYISLPWWAGQALFGTL PD+VVLTLLYSIAG GI IVNDFKSVEGDRALGLQSLPVA
Sbjct: 244 GASYISLPWWAGQALFGTLTPDVVVLTLLYSIAGLGIAIVNDFKSVEGDRALGLQSLPVA 303

Query: 248 FGAETAKWICVGAIDITQLSVAGYLLGAGKPYYALALLALIAPQVFFQFKYFLKDPVKYD 307
           FG ETAKWICVGAIDITQLSVAGYLL +GKPYYALAL+ALI PQ+ FQFKYFLKDPVKYD
Sbjct: 304 FGTETAKWICVGAIDITQLSVAGYLLASGKPYYALALVALIIPQIVFQFKYFLKDPVKYD 363

Query: 308 VKYQASAQPFLVLGLLITALATSH 332
           VKYQASAQPFLVLG+ +TALA+ H
Sbjct: 364 VKYQASAQPFLVLGIFVTALASQH 387

[Close]

BLAST of Cp4.1LG10g07890.1 vs. TAIR 10
Match: AT2G18950.1 (homogentisate phytyltransferase 1 )

HSP 1 Score: 56.6 bits (135), Expect = 4.4e-08
Identity = 49/224 (21.88%), Postives = 95/224 (42.41%), Query Frame = 0


Query: 74  FEDVAKSITCMLMSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISENEVMAQIWVL 133
           F  + +++   LM   ++ G    +N   D EID +N+PY P+ SG  S N  +A +   
Sbjct: 135 FTGILEAVVAALMMNIYIVG----LNQLSDVEIDKVNKPYLPLASGEYSVNTGIAIVASF 194

Query: 134 LLGGLGLAGLLDVWAGHDFPIVFYLALGGSL-LSYIYSAPPLKLKQNGWIGN---CALGA 193
            +    L  ++  W     P+ + L +   L  +Y  + P L+ K+   +      A+ A
Sbjct: 195 SIMSFWLGWIVGSW-----PLFWALFVSFMLGTAYSINLPLLRWKRFALVAAMCILAVRA 254

Query: 194 SYISLPWW--AGQALFG---TLAPDIVVLTLLYSIAGFGIGIVNDFKSVEGDRALGLQSL 253
             + + ++      +FG        ++  T   S     I +  D   +EGD+  G++S 
Sbjct: 255 IIVQIAFYLHIQTHVFGRPILFTRPLIFATAFMSFFSVVIALFKDIPDIEGDKIFGIRSF 314

Query: 254 PVAFGAETAKWICVGAIDITQLSVAGYLLGAGKPYYALALLALI 289
            V  G +   W CV  + +        L+GA  P+    +++++
Sbjct: 315 SVTLGQKRVFWTCVTLLQMAY--AVAILVGATSPFIWSKVISVV 347

The following BLAST results are available for this feature:

BLAST of Cp4.1LG10g07890.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5W6H5	7.7e-135	88.26	Chlorophyll synthase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
Q38833	1.0e-134	87.50	Chlorophyll synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CHLG PE=2...	[more]
Q9M3W5	5.5e-133	87.12	Chlorophyll synthase, chloroplastic OS=Avena sativa OX=4498 GN=CHLG PE=1 SV=1	[more]
P33326	1.1e-40	38.08	Bacteriochlorophyll synthase 34 kDa chain OS=Chloroflexus aurantiacus (strain AT...	[more]
P26170	9.1e-35	35.86	Bacteriochlorophyll synthase 33 kDa chain OS=Rhodobacter capsulatus (strain ATCC...	[more]

BLAST of Cp4.1LG10g07890.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7033765.1	3.10e-215	93.60	Chlorophyll synthase, chloroplastic, partial [Cucurbita argyrosperma subsp. argy...	[more]
XP_023543339.1	1.31e-213	84.18	chlorophyll synthase, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022978209.1	2.95e-210	83.11	chlorophyll synthase, chloroplastic [Cucurbita maxima]	[more]
XP_022949992.1	3.43e-209	82.84	chlorophyll synthase, chloroplastic-like [Cucurbita moschata]	[more]
KAG6595396.1	1.10e-202	83.76	Chlorophyll synthase, chloroplastic, partial [Cucurbita argyrosperma subsp. soro...	[more]

BLAST of Cp4.1LG10g07890.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ITH4	1.43e-210	83.11	chlorophyll synthase, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111478261 ...	[more]
A0A6J1GDL2	1.66e-209	82.84	chlorophyll synthase, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1CS79	6.53e-200	79.09	chlorophyll synthase, chloroplastic isoform X2 OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1CQL1	9.61e-200	78.88	chlorophyll synthase, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1EV65	2.65e-199	78.82	chlorophyll synthase, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of Cp4.1LG10g07890.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51820.1	7.2e-136	87.50	UbiA prenyltransferase family protein	[more]
AT2G18950.1	4.4e-08	21.88	homogentisate phytyltransferase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044878	UbiA prenyltransferase superfamily	GENE3D	1.10.357.140	UbiA prenyltransferase	coord: 56..207 e-value: 4.1E-24 score: 87.0
IPR011799	Chlorophyll synthase, ChlG	TIGRFAM	TIGR02056	TIGR02056	coord: 66..331 e-value: 2.4E-156 score: 517.9
IPR000537	UbiA prenyltransferase family	PFAM	PF01040	UbiA	coord: 84..301 e-value: 3.0E-37 score: 128.3
None	No IPR available	GENE3D	1.20.120.1780	UbiA prenyltransferase	coord: 208..330 e-value: 1.9E-6 score: 29.8
None	No IPR available	PANTHER	PTHR42723	CHLOROPHYLL SYNTHASE	coord: 67..330
IPR006372	Bacteriochlorophyll/chlorophyll synthetase	TIGRFAM	TIGR01476	TIGR01476	coord: 68..328 e-value: 5.2E-99 score: 329.2
IPR006372	Bacteriochlorophyll/chlorophyll synthetase	CDD	cd13958	PT_UbiA_chlorophyll	coord: 68..326 e-value: 2.93504E-127 score: 363.473

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG10g07890	Cp4.1LG10g07890	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG10g07890.1:exon:001	Cp4.1LG10g07890.1:exon:001	exon
Cp4.1LG10g07890.1:exon:002	Cp4.1LG10g07890.1:exon:002	exon
Cp4.1LG10g07890.1:exon:003	Cp4.1LG10g07890.1:exon:003	exon
Cp4.1LG10g07890.1:exon:004	Cp4.1LG10g07890.1:exon:004	exon
Cp4.1LG10g07890.1:exon:005	Cp4.1LG10g07890.1:exon:005	exon
Cp4.1LG10g07890.1:exon:006	Cp4.1LG10g07890.1:exon:006	exon
Cp4.1LG10g07890.1:exon:007	Cp4.1LG10g07890.1:exon:007	exon
Cp4.1LG10g07890.1:exon:008	Cp4.1LG10g07890.1:exon:008	exon
Cp4.1LG10g07890.1:exon:009	Cp4.1LG10g07890.1:exon:009	exon
Cp4.1LG10g07890.1:exon:010	Cp4.1LG10g07890.1:exon:010	exon
Cp4.1LG10g07890.1:exon:011	Cp4.1LG10g07890.1:exon:011	exon
Cp4.1LG10g07890.1:exon:012	Cp4.1LG10g07890.1:exon:012	exon
Cp4.1LG10g07890.1:exon:013	Cp4.1LG10g07890.1:exon:013	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG10g07890.1:cds:013	Cp4.1LG10g07890.1:cds:013	CDS
Cp4.1LG10g07890.1:cds:012	Cp4.1LG10g07890.1:cds:012	CDS
Cp4.1LG10g07890.1:cds:011	Cp4.1LG10g07890.1:cds:011	CDS
Cp4.1LG10g07890.1:cds:010	Cp4.1LG10g07890.1:cds:010	CDS
Cp4.1LG10g07890.1:cds:009	Cp4.1LG10g07890.1:cds:009	CDS
Cp4.1LG10g07890.1:cds:008	Cp4.1LG10g07890.1:cds:008	CDS
Cp4.1LG10g07890.1:cds:007	Cp4.1LG10g07890.1:cds:007	CDS
Cp4.1LG10g07890.1:cds:006	Cp4.1LG10g07890.1:cds:006	CDS
Cp4.1LG10g07890.1:cds:005	Cp4.1LG10g07890.1:cds:005	CDS
Cp4.1LG10g07890.1:cds:004	Cp4.1LG10g07890.1:cds:004	CDS
Cp4.1LG10g07890.1:cds:003	Cp4.1LG10g07890.1:cds:003	CDS
Cp4.1LG10g07890.1:cds:002	Cp4.1LG10g07890.1:cds:002	CDS
Cp4.1LG10g07890.1:cds:001	Cp4.1LG10g07890.1:cds:001	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG10g07890.1:three_prime_utr:001	Cp4.1LG10g07890.1:three_prime_utr:001	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG10g07890.1	Cp4.1LG10g07890.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015995	chlorophyll biosynthetic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046408	chlorophyll synthetase activity
molecular_function	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups