Cp4.1LG10g05130.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGATCCTTGAGCTGATAACAGGGCGGCGGCCAACCGACCCCGAGTTCGAAGAAAACGGTCTAGTGAAATGGGTATGCAGCAGTTTAGAAAAGGAAGGCATGAAGCATATTGTAGACCCGAAATTGGATTGGTGTCACATGGAGGAAATGTTGAAGGTCCTCAACATTGGGCTCCAATGCAGCAGCCCTCAACCTGTGAACCGCCCAGCCATGCGGCGAGTGGTTAAGCTGTTGGAAGAAGTTCGTATGGATAGCCACCCGATGATTGGAGGGAGAGAGGGAAGATTGAAGCCATATAGTTTGGATGATGTTTCAGATAGTGAAAATGTGGTATAG ATGGTGATCCTTGAGCTGATAACAGGGCGGCGGCCAACCGACCCCGAGTTCGAAGAAAACGGTCTAGTGAAATGGGTATGCAGCAGTTTAGAAAAGGAAGGCATGAAGCATATTGTAGACCCGAAATTGGATTGGTGTCACATGGAGGAAATGTTGAAGGTCCTCAACATTGGGCTCCAATGCAGCAGCCCTCAACCTGTGAACCGCCCAGCCATGCGGCGAGTGGTTAAGCTGTTGGAAGAAGTTCGTATGGATAGCCACCCGATGATTGGAGGGAGAGAGGGAAGATTGAAGCCATATAGTTTGGATGATGTTTCAGATAGTGAAAATGTGGTATAG ATGGTGATCCTTGAGCTGATAACAGGGCGGCGGCCAACCGACCCCGAGTTCGAAGAAAACGGTCTAGTGAAATGGGTATGCAGCAGTTTAGAAAAGGAAGGCATGAAGCATATTGTAGACCCGAAATTGGATTGGTGTCACATGGAGGAAATGTTGAAGGTCCTCAACATTGGGCTCCAATGCAGCAGCCCTCAACCTGTGAACCGCCCAGCCATGCGGCGAGTGGTTAAGCTGTTGGAAGAAGTTCGTATGGATAGCCACCCGATGATTGGAGGGAGAGAGGGAAGATTGAAGCCATATAGTTTGGATGATGTTTCAGATAGTGAAAATGTGGTATAG MVILELITGRRPTDPEFEENGLVKWVCSSLEKEGMKHIVDPKLDWCHMEEMLKVLNIGLQCSSPQPVNRPAMRRVVKLLEEVRMDSHPMIGGREGRLKPYSLDDVSDSENVV Homology
BLAST of Cp4.1LG10g05130.1 vs. ExPASy Swiss-Prot
Match: Q9SGP2 (Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=2 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 3.9e-30 Identity = 57/115 (49.57%), Postives = 85/115 (73.91%), Query Frame = 0
BLAST of Cp4.1LG10g05130.1 vs. ExPASy Swiss-Prot
Match: P47735 (Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 2.3e-22 Identity = 51/112 (45.54%), Postives = 78/112 (69.64%), Query Frame = 0
BLAST of Cp4.1LG10g05130.1 vs. ExPASy Swiss-Prot
Match: Q9SYM9 (Receptor-like serine/threonine-protein kinase At1g78530 OS=Arabidopsis thaliana OX=3702 GN=At1g78530 PE=2 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 6.2e-12 Identity = 38/91 (41.76%), Postives = 55/91 (60.44%), Query Frame = 0
BLAST of Cp4.1LG10g05130.1 vs. ExPASy Swiss-Prot
Match: Q9M0G7 (MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 5.3e-11 Identity = 36/87 (41.38%), Postives = 56/87 (64.37%), Query Frame = 0
BLAST of Cp4.1LG10g05130.1 vs. ExPASy Swiss-Prot
Match: Q9FMD7 (Probable inactive receptor kinase At5g16590 OS=Arabidopsis thaliana OX=3702 GN=At5g16590 PE=1 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 5.3e-11 Identity = 34/87 (39.08%), Postives = 53/87 (60.92%), Query Frame = 0
BLAST of Cp4.1LG10g05130.1 vs. NCBI nr
Match: XP_023543393.1 (receptor-like protein kinase HSL1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 236 bits (603), Expect = 3.71e-70 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0
BLAST of Cp4.1LG10g05130.1 vs. NCBI nr
Match: KAG6604470.1 (Receptor-like protein kinase HSL1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 231 bits (590), Expect = 2.46e-68 Identity = 110/112 (98.21%), Postives = 110/112 (98.21%), Query Frame = 0
BLAST of Cp4.1LG10g05130.1 vs. NCBI nr
Match: XP_022925579.1 (receptor-like protein kinase HSL1 isoform X1 [Cucurbita moschata]) HSP 1 Score: 230 bits (586), Expect = 8.94e-68 Identity = 109/112 (97.32%), Postives = 110/112 (98.21%), Query Frame = 0
BLAST of Cp4.1LG10g05130.1 vs. NCBI nr
Match: XP_022978638.1 (receptor-like protein kinase HSL1 [Cucurbita maxima]) HSP 1 Score: 220 bits (561), Expect = 2.82e-64 Identity = 106/112 (94.64%), Postives = 107/112 (95.54%), Query Frame = 0
BLAST of Cp4.1LG10g05130.1 vs. NCBI nr
Match: KAG7034614.1 (Receptor-like protein kinase HSL1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 213 bits (541), Expect = 2.83e-61 Identity = 100/105 (95.24%), Postives = 101/105 (96.19%), Query Frame = 0
BLAST of Cp4.1LG10g05130.1 vs. ExPASy TrEMBL
Match: A0A6J1ECK2 (receptor-like protein kinase HSL1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432972 PE=3 SV=1) HSP 1 Score: 230 bits (586), Expect = 4.33e-68 Identity = 109/112 (97.32%), Postives = 110/112 (98.21%), Query Frame = 0
BLAST of Cp4.1LG10g05130.1 vs. ExPASy TrEMBL
Match: A0A6J1ITT3 (receptor-like protein kinase HSL1 OS=Cucurbita maxima OX=3661 GN=LOC111478554 PE=3 SV=1) HSP 1 Score: 220 bits (561), Expect = 1.37e-64 Identity = 106/112 (94.64%), Postives = 107/112 (95.54%), Query Frame = 0
BLAST of Cp4.1LG10g05130.1 vs. ExPASy TrEMBL
Match: A0A314ZK70 (Receptor-like protein kinase HSL1 OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_30430 PE=4 SV=1) HSP 1 Score: 151 bits (382), Expect = 1.76e-40 Identity = 66/112 (58.93%), Postives = 87/112 (77.68%), Query Frame = 0
BLAST of Cp4.1LG10g05130.1 vs. ExPASy TrEMBL
Match: A0A6J5X6H4 (Protein kinase domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS25166 PE=3 SV=1) HSP 1 Score: 151 bits (382), Expect = 3.90e-40 Identity = 66/112 (58.93%), Postives = 87/112 (77.68%), Query Frame = 0
BLAST of Cp4.1LG10g05130.1 vs. ExPASy TrEMBL
Match: A0A314XG85 (Receptor-like protein kinase HSL1 OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_33388 PE=3 SV=1) HSP 1 Score: 151 bits (382), Expect = 3.90e-40 Identity = 66/112 (58.93%), Postives = 87/112 (77.68%), Query Frame = 0
BLAST of Cp4.1LG10g05130.1 vs. TAIR 10
Match: AT1G28440.1 (HAESA-like 1 ) HSP 1 Score: 132.1 bits (331), Expect = 2.8e-31 Identity = 57/115 (49.57%), Postives = 85/115 (73.91%), Query Frame = 0
BLAST of Cp4.1LG10g05130.1 vs. TAIR 10
Match: AT4G28490.1 (Leucine-rich receptor-like protein kinase family protein ) HSP 1 Score: 106.3 bits (264), Expect = 1.6e-23 Identity = 51/112 (45.54%), Postives = 78/112 (69.64%), Query Frame = 0
BLAST of Cp4.1LG10g05130.1 vs. TAIR 10
Match: AT1G78530.1 (Protein kinase superfamily protein ) HSP 1 Score: 71.6 bits (174), Expect = 4.4e-13 Identity = 38/91 (41.76%), Postives = 55/91 (60.44%), Query Frame = 0
BLAST of Cp4.1LG10g05130.1 vs. TAIR 10
Match: AT4G28650.1 (Leucine-rich repeat transmembrane protein kinase family protein ) HSP 1 Score: 68.6 bits (166), Expect = 3.8e-12 Identity = 36/87 (41.38%), Postives = 56/87 (64.37%), Query Frame = 0
BLAST of Cp4.1LG10g05130.1 vs. TAIR 10
Match: AT5G16590.1 (Leucine-rich repeat protein kinase family protein ) HSP 1 Score: 68.6 bits (166), Expect = 3.8e-12 Identity = 34/87 (39.08%), Postives = 53/87 (60.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|