Cp4.1LG10g03980.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG10g03980.1
TypemRNA
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionUnknown protein
LocationCp4.1LG10: 1674872 .. 1675390 (+)
Sequence length519
RNA-Seq ExpressionCp4.1LG10g03980.1
SyntenyCp4.1LG10g03980.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCAATTCCAACTGTTTGTTCGTCGACCAAAAACCCATCAGAATCATGAAGACCGACGGCAAGATCCTCGAATACAAATCCCCAACCAGAGTCTTCCAAGTCCTCTCCGATTTCTCCGGCCACCAAATCTCCGACGCCGTTCCAGTTTCCCAGCATCTCCACCCAACAGCCAAGCTCCTCGCTGGGCACCTCTACTTTCTGATCCCCACCGAGGCGGCGGAGAAAAAGCCAAAGAAGAAGACGGTTCGGTTCGCGGAATCGGAGAAGGAAGAAAGCGGCGGTGATGGGGGCGGCGAGAACGGCGGGGGGACGGGGCGGGTGGTTAGAATAAAGTTGGTTATGACGAAGAAGGAGCTGCAGGAGATGGTGGAAAGAGGGGGGATTTCGGGAGATGAAATGATATGTAAGATAAAAAGTGGAAGTGGGGAAATTAGTTGCACAGAATTGGAGGAAGATGAGGAACAGAGATGGAAGCCTGCTCTTCAAACCATACCGGAAAGTGAAGTTGCTTGCTAG

mRNA sequence

ATGGGCAATTCCAACTGTTTGTTCGTCGACCAAAAACCCATCAGAATCATGAAGACCGACGGCAAGATCCTCGAATACAAATCCCCAACCAGAGTCTTCCAAGTCCTCTCCGATTTCTCCGGCCACCAAATCTCCGACGCCGTTCCAGTTTCCCAGCATCTCCACCCAACAGCCAAGCTCCTCGCTGGGCACCTCTACTTTCTGATCCCCACCGAGGCGGCGGAGAAAAAGCCAAAGAAGAAGACGGTTCGGTTCGCGGAATCGGAGAAGGAAGAAAGCGGCGGTGATGGGGGCGGCGAGAACGGCGGGGGGACGGGGCGGGTGGTTAGAATAAAGTTGGTTATGACGAAGAAGGAGCTGCAGGAGATGGTGGAAAGAGGGGGGATTTCGGGAGATGAAATGATATGTAAGATAAAAAGTGGAAGTGGGGAAATTAGTTGCACAGAATTGGAGGAAGATGAGGAACAGAGATGGAAGCCTGCTCTTCAAACCATACCGGAAAGTGAAGTTGCTTGCTAG

Coding sequence (CDS)

ATGGGCAATTCCAACTGTTTGTTCGTCGACCAAAAACCCATCAGAATCATGAAGACCGACGGCAAGATCCTCGAATACAAATCCCCAACCAGAGTCTTCCAAGTCCTCTCCGATTTCTCCGGCCACCAAATCTCCGACGCCGTTCCAGTTTCCCAGCATCTCCACCCAACAGCCAAGCTCCTCGCTGGGCACCTCTACTTTCTGATCCCCACCGAGGCGGCGGAGAAAAAGCCAAAGAAGAAGACGGTTCGGTTCGCGGAATCGGAGAAGGAAGAAAGCGGCGGTGATGGGGGCGGCGAGAACGGCGGGGGGACGGGGCGGGTGGTTAGAATAAAGTTGGTTATGACGAAGAAGGAGCTGCAGGAGATGGTGGAAAGAGGGGGGATTTCGGGAGATGAAATGATATGTAAGATAAAAAGTGGAAGTGGGGAAATTAGTTGCACAGAATTGGAGGAAGATGAGGAACAGAGATGGAAGCCTGCTCTTCAAACCATACCGGAAAGTGAAGTTGCTTGCTAG

Protein sequence

MGNSNCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVSQHLHPTAKLLAGHLYFLIPTEAAEKKPKKKTVRFAESEKEESGGDGGGENGGGTGRVVRIKLVMTKKELQEMVERGGISGDEMICKIKSGSGEISCTELEEDEEQRWKPALQTIPESEVAC
Homology
[Close]
BLAST of Cp4.1LG10g03980.1 vs. NCBI nr
Match: XP_023544756.1 (uncharacterized protein LOC111804252 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 342 bits (876), Expect = 2.31e-118
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0 

Query: 1   MGNSNCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVSQHLHPTAKL 60
           MGNSNCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVSQHLHPTAKL
Sbjct: 1   MGNSNCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVSQHLHPTAKL 60

Query: 61  LAGHLYFLIPTEAAEKKPKKKTVRFAESEKEESGGDGGGENGGGTGRVVRIKLVMTKKEL 120
           LAGHLYFLIPTEAAEKKPKKKTVRFAESEKEESGGDGGGENGGGTGRVVRIKLVMTKKEL
Sbjct: 61  LAGHLYFLIPTEAAEKKPKKKTVRFAESEKEESGGDGGGENGGGTGRVVRIKLVMTKKEL 120

Query: 121 QEMVERGGISGDEMICKIKSGSGEISCTELEEDEEQRWKPALQTIPESEVAC 172
           QEMVERGGISGDEMICKIKSGSGEISCTELEEDEEQRWKPALQTIPESEVAC
Sbjct: 121 QEMVERGGISGDEMICKIKSGSGEISCTELEEDEEQRWKPALQTIPESEVAC 172

[Close]
BLAST of Cp4.1LG10g03980.1 vs. NCBI nr
Match: KAG7034500.1 (hypothetical protein SDJN02_04230, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 331 bits (848), Expect = 4.15e-114
Identity = 168/172 (97.67%), Postives = 170/172 (98.84%), Query Frame = 0 

Query: 1   MGNSNCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVSQHLHPTAKL 60
           MGNSNCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVSQHLHPTAKL
Sbjct: 1   MGNSNCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVSQHLHPTAKL 60

Query: 61  LAGHLYFLIPTEAAEKKPKKKTVRFAESEKEESGGDGGGENGGGTGRVVRIKLVMTKKEL 120
           LAGHLYFLIP EAAEKKPKK TVRFA+SEKEESGGDGGGENGGGTGRVVRIKLVMTKKEL
Sbjct: 61  LAGHLYFLIPAEAAEKKPKK-TVRFADSEKEESGGDGGGENGGGTGRVVRIKLVMTKKEL 120

Query: 121 QEMVERGGISGDEMICKIKSGSGEISCTELEEDEEQRWKPALQTIPESEVAC 172
           QEMVERGGISGDEMICKIKSGSGEISCTELEEDEEQRWKPALQ+IPESEVAC
Sbjct: 121 QEMVERGGISGDEMICKIKSGSGEISCTELEEDEEQRWKPALQSIPESEVAC 171

[Close]
BLAST of Cp4.1LG10g03980.1 vs. NCBI nr
Match: KAG6604349.1 (hypothetical protein SDJN03_04958, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 330 bits (847), Expect = 5.89e-114
Identity = 167/172 (97.09%), Postives = 170/172 (98.84%), Query Frame = 0 

Query: 1   MGNSNCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVSQHLHPTAKL 60
           MGNSNCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVSQHLHPTAKL
Sbjct: 1   MGNSNCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVSQHLHPTAKL 60

Query: 61  LAGHLYFLIPTEAAEKKPKKKTVRFAESEKEESGGDGGGENGGGTGRVVRIKLVMTKKEL 120
           LAGHLYFL+P EAAEKKPKK TVRFA+SEKEESGGDGGGENGGGTGRVVRIKLVMTKKEL
Sbjct: 61  LAGHLYFLVPAEAAEKKPKK-TVRFADSEKEESGGDGGGENGGGTGRVVRIKLVMTKKEL 120

Query: 121 QEMVERGGISGDEMICKIKSGSGEISCTELEEDEEQRWKPALQTIPESEVAC 172
           QEMVERGGISGDEMICKIKSGSGEISCTELEEDEEQRWKPALQ+IPESEVAC
Sbjct: 121 QEMVERGGISGDEMICKIKSGSGEISCTELEEDEEQRWKPALQSIPESEVAC 171

[Close]
BLAST of Cp4.1LG10g03980.1 vs. NCBI nr
Match: XP_022977419.1 (uncharacterized protein LOC111477765 [Cucurbita maxima])

HSP 1 Score: 313 bits (802), Expect = 3.60e-107
Identity = 162/172 (94.19%), Postives = 165/172 (95.93%), Query Frame = 0 

Query: 1   MGNSNCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVSQHLHPTAKL 60
           MGNSNCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVSQHLHPTAKL
Sbjct: 1   MGNSNCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVSQHLHPTAKL 60

Query: 61  LAGHLYFLIPTEAAEKKPKKKTVRFAESEKEESGGDGGGENGGGTGRVVRIKLVMTKKEL 120
           LAGHLYFLIPTEAAEKKPKK TVRFA+SEKEESG     ENGGGTGRVVRIKLVMTKKEL
Sbjct: 61  LAGHLYFLIPTEAAEKKPKK-TVRFADSEKEESG-----ENGGGTGRVVRIKLVMTKKEL 120

Query: 121 QEMVERGGISGDEMICKIKSGSGEISCTELEEDEEQRWKPALQTIPESEVAC 172
           QEMVERGGISGDEM+CKIKSGSGEISCTELEE EEQRWKPALQ+IPESEVAC
Sbjct: 121 QEMVERGGISGDEMVCKIKSGSGEISCTELEEAEEQRWKPALQSIPESEVAC 166

[Close]
BLAST of Cp4.1LG10g03980.1 vs. NCBI nr
Match: XP_038882971.1 (uncharacterized protein LOC120074056 [Benincasa hispida])

HSP 1 Score: 246 bits (627), Expect = 1.52e-80
Identity = 130/176 (73.86%), Postives = 143/176 (81.25%), Query Frame = 0 

Query: 1   MGNSNCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVSQHLHPTAKL 60
           MGN NCLF+D+KPIRIMK DGKILEYKSPTRVFQVLSDFSGH+ISDAVPV+ HLH TAKL
Sbjct: 1   MGNCNCLFIDEKPIRIMKPDGKILEYKSPTRVFQVLSDFSGHEISDAVPVTHHLHRTAKL 60

Query: 61  LAGHLYFLIPTEAAEKKPKKKTVRFAESEKEESGGDGGGENGGGTGRVVRIKLVMTKKEL 120
           L+GHLYFLIP +  EKK KK  VRFAE EKE  GG            VVRIK+VMTKKEL
Sbjct: 61  LSGHLYFLIPKQTEEKKAKK-AVRFAEPEKESGGG------------VVRIKVVMTKKEL 120

Query: 121 QEMVERGGISGDEMICKIKSGSGEISCTELEEDEE----QRWKPALQTIPESEVAC 172
           +EMVERGGIS +EMI KIKSGSGEISC +LEE++E    QRWKP LQ+IPESEVAC
Sbjct: 121 EEMVERGGISAEEMISKIKSGSGEISCRDLEEEDEESELQRWKPVLQSIPESEVAC 163

[Close]
BLAST of Cp4.1LG10g03980.1 vs. ExPASy TrEMBL
Match: A0A6J1IRC0 (uncharacterized protein LOC111477765 OS=Cucurbita maxima OX=3661 GN=LOC111477765 PE=4 SV=1)

HSP 1 Score: 313 bits (802), Expect = 1.74e-107
Identity = 162/172 (94.19%), Postives = 165/172 (95.93%), Query Frame = 0 

Query: 1   MGNSNCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVSQHLHPTAKL 60
           MGNSNCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVSQHLHPTAKL
Sbjct: 1   MGNSNCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVSQHLHPTAKL 60

Query: 61  LAGHLYFLIPTEAAEKKPKKKTVRFAESEKEESGGDGGGENGGGTGRVVRIKLVMTKKEL 120
           LAGHLYFLIPTEAAEKKPKK TVRFA+SEKEESG     ENGGGTGRVVRIKLVMTKKEL
Sbjct: 61  LAGHLYFLIPTEAAEKKPKK-TVRFADSEKEESG-----ENGGGTGRVVRIKLVMTKKEL 120

Query: 121 QEMVERGGISGDEMICKIKSGSGEISCTELEEDEEQRWKPALQTIPESEVAC 172
           QEMVERGGISGDEM+CKIKSGSGEISCTELEE EEQRWKPALQ+IPESEVAC
Sbjct: 121 QEMVERGGISGDEMVCKIKSGSGEISCTELEEAEEQRWKPALQSIPESEVAC 166

[Close]
BLAST of Cp4.1LG10g03980.1 vs. ExPASy TrEMBL
Match: A0A0A0KHH5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G452650 PE=4 SV=1)

HSP 1 Score: 243 bits (619), Expect = 1.64e-79
Identity = 132/183 (72.13%), Postives = 145/183 (79.23%), Query Frame = 0 

Query: 1   MGNSNCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVSQHLHPTAKL 60
           MGN NCLF+D KPIRIMKTDGKILEYKSPTRVFQVLSDFSGH+ISDAVPVS HLH TAKL
Sbjct: 1   MGNCNCLFIDNKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHEISDAVPVSHHLHRTAKL 60

Query: 61  LAGHLYFLIPTEAAEKKPKKKTVRFAESEKEESGGDGGGENGGGTGRVVRIKLVMTKKEL 120
           L+GHLYFLIP E  EKKPKK  VRFAE EKE + G G          VVRIK+VMTKKEL
Sbjct: 61  LSGHLYFLIPKEPEEKKPKK-AVRFAEPEKETATGGG----------VVRIKVVMTKKEL 120

Query: 121 QEMVERGGISGDEMICKIKSGSGEISC-TELEEDEE----------QRWKPALQTIPESE 172
           QEMVERGGIS +EMICKIK+G GEIS  +E+EE+E+          QRWKP L++IPESE
Sbjct: 121 QEMVERGGISAEEMICKIKNGCGEISSRSEMEEEEDDDDDDEESELQRWKPVLESIPESE 172

[Close]
BLAST of Cp4.1LG10g03980.1 vs. ExPASy TrEMBL
Match: A0A1S3CHA7 (uncharacterized protein LOC103500900 OS=Cucumis melo OX=3656 GN=LOC103500900 PE=4 SV=1)

HSP 1 Score: 243 bits (619), Expect = 1.76e-79
Identity = 133/182 (73.08%), Postives = 145/182 (79.67%), Query Frame = 0 

Query: 1   MGNSNCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVSQHLHPTAKL 60
           MGN NCLFVD KPIRIMKTDGKILEYKSPTRVFQVLSDFSGH+ISDAVPV+ HLH TAKL
Sbjct: 1   MGNCNCLFVDHKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHEISDAVPVTHHLHRTAKL 60

Query: 61  LAGHLYFLIPTEAAEKKPKKKTVRFAESEKEESGGDGGGENGGGTGRVVRIKLVMTKKEL 120
           L+GHLYFLIP E  EKKPKK  VRFAE EKE +    GG        VVRIK+VMTKKEL
Sbjct: 61  LSGHLYFLIPKEPHEKKPKK-AVRFAEPEKETASATTGGG-------VVRIKVVMTKKEL 120

Query: 121 QEMVERGGISGDEMICKIKSGSGEISC-TELEEDEE---------QRWKPALQTIPESEV 172
           QEMVERGGIS +EMICKIK+G GEIS  +E+EE+EE         QRWKP L++IPESEV
Sbjct: 121 QEMVERGGISAEEMICKIKNGRGEISSRSEMEEEEEEEEDEESELQRWKPVLESIPESEV 174

[Close]
BLAST of Cp4.1LG10g03980.1 vs. ExPASy TrEMBL
Match: A0A6J1I5B2 (uncharacterized protein LOC111471158 OS=Cucurbita maxima OX=3661 GN=LOC111471158 PE=4 SV=1)

HSP 1 Score: 238 bits (608), Expect = 6.79e-78
Identity = 127/175 (72.57%), Postives = 141/175 (80.57%), Query Frame = 0 

Query: 5   NCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVSQHLHPTAKLLAGH 64
           NCL V+QKPIRIMK DGKILEYKSPTRVFQVLSDFSGH ISDAVPV+ HL  T KLL+GH
Sbjct: 3   NCLIVEQKPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLKQTTKLLSGH 62

Query: 65  LYFLIPTEAAE--KKPKKKTVRFAESEKEESGGDGGGENGGGTGRVVRIKLVMTKKELQE 124
           LYFLIPT  AE  +K  KK VRFAE EK         E GGG G+V+RIK+VMTKKEL+E
Sbjct: 63  LYFLIPTAGAEAVEKRGKKAVRFAEPEK---------ETGGGEGKVMRIKVVMTKKELEE 122

Query: 125 MVERGGISGDEMICKIKSGSGEISCTELEEDEEQ-----RWKPALQTIPESEVAC 172
           MVERGGI+ DEMICKIKSGSGEISC ELEE+EE      +W+P+LQ+IPESEVAC
Sbjct: 123 MVERGGITADEMICKIKSGSGEISCRELEEEEEDDEELHKWRPSLQSIPESEVAC 168

[Close]
BLAST of Cp4.1LG10g03980.1 vs. ExPASy TrEMBL
Match: A0A6J1HG15 (uncharacterized protein LOC111463230 OS=Cucurbita moschata OX=3662 GN=LOC111463230 PE=4 SV=1)

HSP 1 Score: 233 bits (594), Expect = 9.82e-76
Identity = 126/178 (70.79%), Postives = 140/178 (78.65%), Query Frame = 0 

Query: 5   NCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVSQHLHPTAKLLAGH 64
           NCL V Q PIRIMK DGKILEYKSPTRVFQVLSDFSGH ISDAVPV+ HL  T KLL+GH
Sbjct: 3   NCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQQTTKLLSGH 62

Query: 65  LYFLIPT---EAAEKKPKKKTVRFAESEKEESGGDGGGENGGGTGRVVRIKLVMTKKELQ 124
           LYFLIPT   EA EK+ KK  VRFAE EK         E GGG G+V+RIK+VMTKKEL+
Sbjct: 63  LYFLIPTAGPEAGEKRGKK-AVRFAEPEK---------ETGGGEGKVMRIKVVMTKKELE 122

Query: 125 EMVERGGISGDEMICKIKSGSGEISCTELEEDEEQ-------RWKPALQTIPESEVAC 172
           EMVERGGI+ DEMICKIKSGSGEISC ELEE+E+        +W+P+LQ+IPESEVAC
Sbjct: 123 EMVERGGITADEMICKIKSGSGEISCRELEEEEDDDDDEELHKWRPSLQSIPESEVAC 170

[Close]
BLAST of Cp4.1LG10g03980.1 vs. TAIR 10
Match: AT3G10120.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G03890.1); Has 57 Blast hits to 57 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 108.6 bits (270), Expect = 5.0e-24
Identity = 67/175 (38.29%), Postives = 108/175 (61.71%), Query Frame = 0 

Query: 5   NCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGH-QISDAVPVSQHLHPTAKLLAG 64
           NCL +++K I+IM+ DGK++EY+ P +V  +L+ FS H  + D++  + HLHP AKLL G
Sbjct: 3   NCLVMEKKVIKIMRNDGKVVEYRGPMKVHHILTQFSPHYSLFDSLTNNCHLHPQAKLLCG 62

Query: 65  HLYFLIPTEAAEKKPKKKT---VRFA--ESEKEESGGDG----GGENGGGTGRVVRIKLV 124
            LY+L+P E    K  KKT   VRFA  E EKEE   D            T  VVR+K+V
Sbjct: 63  RLYYLLPQETNSIKHMKKTMKKVRFANPEVEKEEQEEDRLTDCCDNTKEKTNGVVRVKMV 122

Query: 125 MTKKELQEMVERGGISGDEMICKIKSGSGEISCTELEEDEEQRWKPALQTIPESE 170
           ++K+EL+++++ G +   EM+   ++ + +  C + +E  ++ W+P L +IPE++
Sbjct: 123 VSKQELEKLLQGGSV--HEMV--YRTLAKQHLCDDDDECHKEGWRPLLDSIPETD 173

[Close]
BLAST of Cp4.1LG10g03980.1 vs. TAIR 10
Match: AT5G03890.1 (unknown protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G10120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 103.2 bits (256), Expect = 2.1e-22
Identity = 68/180 (37.78%), Postives = 106/180 (58.89%), Query Frame = 0 

Query: 5   NCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVSQHLHPTAKLLAGH 64
           NCL +++K I+I++ DGK+LEY+ P  V  +L+ FSGH IS     + HL P AKLL+G 
Sbjct: 3   NCLVMEKKVIKIVRDDGKVLEYREPISVHHILTQFSGHSISHN---NTHLLPDAKLLSGR 62

Query: 65  LYFLIPTEAAEKKPKKKTVRFAE----------SEKEESGGDGGGENGGGTGR--VVRIK 124
           LY+L+PT   +KK  KK V FA            E+E+S       +G  T    VVR+K
Sbjct: 63  LYYLLPTTMTKKKVNKK-VTFANPEVEGDERLLREEEDSSESNSNIDGDDTKNVTVVRMK 122

Query: 125 LVMTKKELQEMVERGGISGDEMICKIKSGSGEISCTELEEDE---EQRWKPALQTIPESE 170
           +V+ K+EL+++++ G +   EM+   ++   ++  T  ++D+      W+PAL +IPESE
Sbjct: 123 IVVHKQELEKLLQGGSV--HEMM--YQTLEKQLLLTSSDDDDLECNSGWRPALDSIPESE 174

[Close]
BLAST of Cp4.1LG10g03980.1 vs. TAIR 10
Match: AT3G21680.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 34 Blast hits to 34 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 50.8 bits (120), Expect = 1.2e-06
Identity = 28/68 (41.18%), Postives = 45/68 (66.18%), Query Frame = 0 

Query: 107 RVVRIKLVMTKKELQEMV-ERGGISGDEMICKIKSGSG-EISCTELEEDE----EQRWKP 166
           +VVRIK+V+TKKEL++++  + GI+  + +  +   SG  IS    EEDE    ++ W+P
Sbjct: 50  KVVRIKVVVTKKELRQILGHKNGINSIQQLVHVLKDSGRNISMASYEEDEKEEGDENWRP 109

Query: 167 ALQTIPES 169
            L++IPES
Sbjct: 110 TLESIPES 117

[Close]
BLAST of Cp4.1LG10g03980.1 vs. TAIR 10
Match: AT1G60010.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10530.1); Has 185 Blast hits to 185 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 180; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 41.6 bits (96), Expect = 7.5e-04
Identity = 42/189 (22.22%), Postives = 73/189 (38.62%), Query Frame = 0 

Query: 5   NCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVSQH----------- 64
           NC  VD   + +   DGKI  Y  P  V +++  + GH +S  +P+ +            
Sbjct: 3   NCQAVDAAALVLQHPDGKIDRYYGPVSVSEIMRMYPGHYVSLIIPLPEKNIPATTTTTDD 62

Query: 65  --------------LHPTAKLLAGHLYFLIPTEAAEKKPKKKTVRFAESEKEESGGDGGG 124
                         L PT  L+ GH Y LI ++   K  + K  ++A+++K +S  +   
Sbjct: 63  KSERKVVRFTRVKLLRPTENLVLGHAYRLITSQEVMKVLRAK--KYAKTKKHQS--ETSK 122

Query: 125 ENGGGTGRVVRIKLVMTKKELQEMVERGGISGDEMICKIKSGSGEISCTELEEDEEQRWK 169
           E           K   ++K++ E       S      + K        T       + W+
Sbjct: 123 EK----------KKPSSEKKIDEE------SDKNQNLETKDEKQRSVLTNSASSRSKTWR 171

The following BLAST results are available for this feature:
BLAST of Cp4.1LG10g03980.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG10g03980.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023544756.12.31e-118100.00uncharacterized protein LOC111804252 [Cucurbita pepo subsp. pepo][more]
KAG7034500.14.15e-11497.67hypothetical protein SDJN02_04230, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6604349.15.89e-11497.09hypothetical protein SDJN03_04958, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022977419.13.60e-10794.19uncharacterized protein LOC111477765 [Cucurbita maxima][more]
XP_038882971.11.52e-8073.86uncharacterized protein LOC120074056 [Benincasa hispida][more]
BLAST of Cp4.1LG10g03980.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IRC01.74e-10794.19uncharacterized protein LOC111477765 OS=Cucurbita maxima OX=3661 GN=LOC111477765... [more]
A0A0A0KHH51.64e-7972.13Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G452650 PE=4 SV=1[more]
A0A1S3CHA71.76e-7973.08uncharacterized protein LOC103500900 OS=Cucumis melo OX=3656 GN=LOC103500900 PE=... [more]
A0A6J1I5B26.79e-7872.57uncharacterized protein LOC111471158 OS=Cucurbita maxima OX=3661 GN=LOC111471158... [more]
A0A6J1HG159.82e-7670.79uncharacterized protein LOC111463230 OS=Cucurbita moschata OX=3662 GN=LOC1114632... [more]
BLAST of Cp4.1LG10g03980.1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G10120.15.0e-2438.29unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G03890.12.1e-2237.78unknown protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cel... [more]
AT3G21680.11.2e-0641.18unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin... [more]
AT1G60010.17.5e-0422.22unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025322Protein of unknown function DUF4228, plantPFAMPF14009DUF4228coord: 1..167
e-value: 1.7E-19
score: 70.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..96
NoneNo IPR availablePANTHERPTHR33148PLASTID MOVEMENT IMPAIRED PROTEIN-RELATEDcoord: 1..168
NoneNo IPR availablePANTHERPTHR33148:SF46EXPRESSED PROTEINcoord: 1..168

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cp4.1LG10g03980Cp4.1LG10g03980gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cp4.1LG10g03980.1:exon:001Cp4.1LG10g03980.1:exon:001exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cp4.1LG10g03980.1:cds:001Cp4.1LG10g03980.1:cds:001CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cp4.1LG10g03980.1Cp4.1LG10g03980.1-proteinpolypeptide