Cp4.1LG09g10700.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TATCCTTTTTTTATTTAATTTTAATTTAATTTAATTTCTCTCGTCTTTATCTCCGGGCAATTTATTTATTGGAGAGCCAAAAATCAGTGTCCTTCGCCCAATTACTTCAATTAATTCCCAATAAATCGATTAAAATAATGCTATGAATCTGTGCCTCTGAGATGCCAATTTCTCAGTCAAAATCTCTTCTCCTATCCTCAATCCCTCGTCTTCTTCATCTCCGGATCCGCCTTCTTGCTTCACTCCGTCCTTCTCTGTCGCCATTAATGGCTTCCTCTTCCTCTTCCTCCATCATTTCCGAGTCTGCTGCGGGAGAAATCGCCGAAGGATTCATTCATTGCTGATTAAAATCTGAACAGTACGTTTACTTCTTCTTCTTCTTCTCTCTCTGATTTCTTCTTTTTCCTTTTACTTCCACTTCTCATTCTCTGTAATCAATTCCTCTACTCCGCCGCTGAATCCGCTTTTCCTGTTTTCATCAGCCGGATTAGCCGATCAAGTTCTTCGTTCTTCCGTGTATTTAACCACCGGAAATTCACATTCTTCGAAAAAAAAAGCCCTAGCCGGAATTCCGATCGGAAGCGAGATTCAGAGTGAATCGATGACTCAAACGGCGTCGTTTAGTTTCGCCAATCGTAAAAGTTCCTCGAATTTGGAGCGGTTTCTTCAATGCGTTACTCCTTCCGTTCCTTGGCGAACTCTTCCTCAGGTAAAAAGCAAAAAACCCTTAATCTTTTTATTTTTCCGTTTATTTTGTTAATTTATTGTTATATTATACCTTAATTTTAATTACAGAATTTAAAATTCTCCCATTTTCCGCCACCATTATAATTTATTTTCCATATTCACCGTTATAATTATTAATTTTCTTGCCATTTTTATAGATAAAGATATTTACTACATTTATTATATTTATTATATTTTTTCTGNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGTCGGAGTGAATCCGCGGGAATAATACTAAACGTGGCGGATAGATTTCTAATTTCCTCAACTCGCTGAGTCACCTTTTCTCCTTTTTGTCTTTTTGTGTAAATTATGTAATGGGCCGAGTCGTTGTCCTTCTGGGCCCATTAAGACTAAGATAGCTATAATATTCTCCGAATATACCATATATATACACCAATCTCCTCTTCTACTAATTTATAATAATGCCAAATTAATAAAAATATTTTTGCTAAAAAAAATAATTTAAAAAATTTTTAAACCTTAAAAATTTTCAATAATACTCTTGAATTTTAAAAATTTTAAATTTTAAAAGTAGCTTCAACATTATCAACGGAATCTATTAGCATCTCATAATAGGTATTTTTTATTTTTTTTCTTTTAAAGTTTGAACGTATTTTTTTAAAATTTTTTTAATAAAAAAAATGGTATTAATGAAACTTTTGAAAATTCGTATTTTTAAAATAAAGTATAAACGGTTTCCGTCCGAAATTAACGGTAATTTTTTTTTTTTTTTTTTGAAAGTTTAAGGATATTATTGAAACTTTTGAAAGTTTTTGGGTATTTTTTTAAATAAAGTAGGGTTTTTTTTTTTTTTTTTAATAATTTAGTGAATTTATGATAATTATTTTTAATCAATATATAATTATTTTTATTGAATTATGTTTCTGGTGTAGTAATTATAAACTCATTATCATAATATTTTTTAAATTAGCTATTTTTGTCATTTGGTTAGAAAACAAAATAAATTATTATTTTTTTTAAATTATATTTAGGCCGACCCTACAAGGGTGGCCATTAAGCAACGTGCTTAAAGAGACGGGCCCACGTGTCATATTGATTGGCTTTTAAAGAAATATTCCTCTACTTTTTCCCTTCCATAAATAAAAATATTTTGTAAATTAAATTTGATTGATATTCATCACAAAAAGATAGAACTTGTGGGGCATCATTTTTCGTCATGAAGTGCTAAATTAGAGGTGTTAAAAGAATGGGTTGGGCACCAACTCGAAAAATTTTAAATTAATAATCATTCGGTTGGATTGTTAATAGTAAGGATTGTTTGTTTGAGTTTAAAAAATTTATAATCGAACAATTGAATTAGGTATAAAAGGATGTTCCTACCTAACTTGGGTTAGGAATCACGACTCTCCACAATAGTATGATATTGTCCACTTCAATAGTATGATATTGTCCACTTTGGGTATTATAAGCTCTCGTAGCTTTGTTTTGGGCTACCCCGAAAGGCCTCATACCAATGGAGATTAGTTAGTATAACCCATGGTCTTCTACTAAATTAACTAATGTGGGACTCACTCCCATCAATCCTCCCTGAGGCTTATGGAGCTCTCGAATAGCCTCCCCTTAATCGAGGCTCGACTCCTTTCTCTGGAGCCCTCAAACAAAGTACACCCTTTGTTTGACACTTTAGTCACTTTTGACTACACCTTCGAGGCTCACAATTCTTTGTTCGATATTTGAGGATGCTATTGACATGGCTAAGTTTAGAGCATGGTTCTAATACCATGTTAGGAATCACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCGCTCGTGGCTTTGTGTTGGGCTACCCCAAAAGGCCTCATGTCAATGGAGATTAGTATTCCTCACTTATAAACCCATGATCTTCCACTGAATTAACCAACGTGGGACTCACTCCCAATAATCTTCAACAACTTGACCCAACCTATGAACACGCTTATGCTAAATAATGTTGTAATTACATCATTTTTAGTCCATATATTAGTGTTTTTCGTTTTAACTGAAACGTTAATGTTAGACTTTATTATTAACTTGCTTGAGATTTAAAACTTCACTCAAGCTTTTCGGGTTTAGCGATGATTTATTATCGCATTAGAGTAAGAGGTCGAGTAGGAGGTCGAGTAGGAGGTCGTGTGTTTCGAAAGAGTGATCAAGAGGGTGGGAATTTGAAGCCATTGGTTGCTGTGCTGTCTAAGCCTCATTTTGTTGTATGCAATTCATGGAAGATCTTTTGTGCAGCCAGTAGGGTAGAACTTGCTTGTAAGTGTTTCTGTCTTACTTTCTCTAAACTTACTATCATCTTTTCTTTTTCATATAGAGCTGCCTTCATGATCTCAATAGTCATTGGCAACAACCTGATAAAGATACGGTTCAGTACTTCACGCTCGGCGAGCTATGGGATTGCTATAACGAATGGAGTGCATATGGCGCCGGTATCCCGATACAGTTGAACGGTTCCGAGACTGCCATGCAGTTCTATGTGCCTTATCTGTCTGCAATTCAGATCTACACAAGCAAGCCTGTTGCCCCTCCCAGGTATACTTAAAAAGGGAATGTTTGATATGCTCCTGTTGTATTGCACTGTATTATGAGATGTCACGTTGGTTGGGGAGGAGAACGGAACATTTTTTATAAGGGTGTTGAAACCTCTCCCTAATAGACGTGTTTTAAAAAACTTGAACGGAACATATCTGCTAGTGGTGGGCTTGGCTGTTATAGTATGTAATCTATTTTTGTTCGATTTCTCTTTATAGAAACCGAAGATATGATAGCGACATGGCAGAATGCGAAAGTGATTCGTGGAGTGACGATAGCTGGAGTGATAACCTGTCAAGATCCTTGAGCAACAACTCTAGCAGGACATGGGATGCGGTTTCTGAAGATTCGAGCTTCGACCAGGACGGATCGTGGTCGTTAAGGGAAAAACTTGGTTACCTCTCTTTACAATATATGGAGATGTCTTCTCCTTATTGGAGAGTGCCTCTTTTGGACAAGGTATGCCTATTTTTTGAGCTTGCATAAAAGAAAAGTATATCCTCAACCTCGACGTTCCGACGAGCATTTCTCGTCGAGGTTGGAAACTCGATGTCGTTAAGAACAAGAAAAACAAAACCTATTGAACTTCAAATTTAACTGTTCTATAGTGGTTGATATTATGAACATTTTCTTTACTTATGTTCGAAAATTTTCATTTCAGATAACGGAACTAACTCAAACATATCCAGCTCTAAATACACTTAGGAGCGTGGATCTTTCTCCAGCAAGTTGGATGGCTGTTTCTTGGTAAACAACACCGCCTTCCTCTATCTATCGATCGACACAAGCTTTCGGGTTATTGATTTTGTTTGCTGCGTTCGGCTTGAATCAGGTATCCTATTTATCATATCCCGAGTCAAATAAACGACAAGGACTTCTCGACATGCTTTCTAACGTATCATACATTGTCTTCGTCTTTCCAAGGTGCGTAATTGTCTGTCTATACTCGTTTCCGAATATGTTAGAATTCTTTGTCCAATGTTTGATGAATTCCAGATTGCTCCATGGATCATGAAGGGCAAGATGGATGTACTTGTTCGAATATCGCAACCGCAGGCCAAACCGACGACAAAACGAGCGGTTTTTCTTCTTCTTCTTCTTCTTCTTCTTGCCTTTTCCCATTTGGGTTAGCCACTTACAGAATGCAGGGAGATCTCTGGCTGCAGCCAGAGACATCGGATTACGAACGGATGGTCGATCTCTATCATACCGCCGATTCGTGGTTGAAACAGCTCAACGTTCATCACCACGACTTCAACTTCTTTTCCCTTCACTCAACCTTGTAG TATCCTTTTTTTATTTAATTTTAATTTAATTTAATTTCTCTCGTCTTTATCTCCGGGCAATTTATTTATTGGAGAGCCAAAAATCAGTGTCCTTCGCCCAATTACTTCAATTAATTCCCAATAAATCGATTAAAATAATGCTATGAATCTGTGCCTCTGAGATGCCAATTTCTCAGTCAAAATCTCTTCTCCTATCCTCAATCCCTCGTCTTCTTCATCTCCGGATCCGCCTTCTTGCTTCACTCCGTCCTTCTCTGTCGCCATTAATGGCTTCCTCTTCCTCTTCCTCCATCATTTCCGAGTCTGCTGCGGGAGAAATCGCCGAAGGATTCATTCATTGCTGATTAAAATCTGAACACCGGATTAGCCGATCAAGTTCTTCGTTCTTCCGTGTATTTAACCACCGGAAATTCACATTCTTCGAAAAAAAAAGCCCTAGCCGGAATTCCGATCGGAAGCGAGATTCAGAGTGAATCGATGACTCAAACGGCGTCGTTTAGTTTCGCCAATCGTAAAAGTTCCTCGAATTTGGAGCGGTTTCTTCAATGCGTTACTCCTTCCGTTCCTTGGCGAACTCTTCCTCAGAGCTGCCTTCATGATCTCAATAGTCATTGGCAACAACCTGATAAAGATACGGTTCAGTACTTCACGCTCGGCGAGCTATGGGATTGCTATAACGAATGGAGTGCATATGGCGCCGGTATCCCGATACAGTTGAACGGTTCCGAGACTGCCATGCAGTTCTATGTGCCTTATCTGACATGGGATGCGGTTTCTGAAGATTCGAGCTTCGACCAGGACGGATCGTGGTCGTTAAGGGAAAAACTTGGTTACCTCTCTTTACAATATATGGAGATGTCTTCTCCTTATTGGAGAGTGCCTCTTTTGGACAAGATAACGGAACTAACTCAAACATATCCAGCTCTAAATACACTTAGGAGCGTGGATCTTTCTCCAGCAAGTTGGATGGCTGTTTCTTGGTATCCTATTTATCATATCCCGAGTCAAATAAACGACAAGGACTTCTCGACATGCTTTCTAACGTATCATACATTGTCTTCGTCTTTCCAAGATTGCTCCATGGATCATGAAGGGCAAGATGGATGTACTTGTTCGAATATCGCAACCGCAGGCCAAACCGACGACAAAACGAGCGGTTTTTCTTCTTCTTCTTCTTCTTCTTCTTGCCTTTTCCCATTTGGGTTAGCCACTTACAGAATGCAGGGAGATCTCTGGCTGCAGCCAGAGACATCGGATTACGAACGGATGGTCGATCTCTATCATACCGCCGATTCGTGGTTGAAACAGCTCAACGTTCATCACCACGACTTCAACTTCTTTTCCCTTCACTCAACCTTGTAG ATGACTCAAACGGCGTCGTTTAGTTTCGCCAATCGTAAAAGTTCCTCGAATTTGGAGCGGTTTCTTCAATGCGTTACTCCTTCCGTTCCTTGGCGAACTCTTCCTCAGAGCTGCCTTCATGATCTCAATAGTCATTGGCAACAACCTGATAAAGATACGGTTCAGTACTTCACGCTCGGCGAGCTATGGGATTGCTATAACGAATGGAGTGCATATGGCGCCGGTATCCCGATACAGTTGAACGGTTCCGAGACTGCCATGCAGTTCTATGTGCCTTATCTGACATGGGATGCGGTTTCTGAAGATTCGAGCTTCGACCAGGACGGATCGTGGTCGTTAAGGGAAAAACTTGGTTACCTCTCTTTACAATATATGGAGATGTCTTCTCCTTATTGGAGAGTGCCTCTTTTGGACAAGATAACGGAACTAACTCAAACATATCCAGCTCTAAATACACTTAGGAGCGTGGATCTTTCTCCAGCAAGTTGGATGGCTGTTTCTTGGTATCCTATTTATCATATCCCGAGTCAAATAAACGACAAGGACTTCTCGACATGCTTTCTAACGTATCATACATTGTCTTCGTCTTTCCAAGATTGCTCCATGGATCATGAAGGGCAAGATGGATGTACTTGTTCGAATATCGCAACCGCAGGCCAAACCGACGACAAAACGAGCGGTTTTTCTTCTTCTTCTTCTTCTTCTTCTTGCCTTTTCCCATTTGGGTTAGCCACTTACAGAATGCAGGGAGATCTCTGGCTGCAGCCAGAGACATCGGATTACGAACGGATGGTCGATCTCTATCATACCGCCGATTCGTGGTTGAAACAGCTCAACGTTCATCACCACGACTTCAACTTCTTTTCCCTTCACTCAACCTTGTAG MTQTASFSFANRKSSSNLERFLQCVTPSVPWRTLPQSCLHDLNSHWQQPDKDTVQYFTLGELWDCYNEWSAYGAGIPIQLNGSETAMQFYVPYLTWDAVSEDSSFDQDGSWSLREKLGYLSLQYMEMSSPYWRVPLLDKITELTQTYPALNTLRSVDLSPASWMAVSWYPIYHIPSQINDKDFSTCFLTYHTLSSSFQDCSMDHEGQDGCTCSNIATAGQTDDKTSGFSSSSSSSSCLFPFGLATYRMQGDLWLQPETSDYERMVDLYHTADSWLKQLNVHHHDFNFFSLHSTL Homology
BLAST of Cp4.1LG09g10700.1 vs. NCBI nr
Match: XP_023542494.1 (uncharacterized protein LOC111802382 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 594 bits (1531), Expect = 2.39e-213 Identity = 294/344 (85.47%), Postives = 294/344 (85.47%), Query Frame = 0
BLAST of Cp4.1LG09g10700.1 vs. NCBI nr
Match: KAG6573005.1 (hypothetical protein SDJN03_26892, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 585 bits (1507), Expect = 1.12e-209 Identity = 291/345 (84.35%), Postives = 292/345 (84.64%), Query Frame = 0
BLAST of Cp4.1LG09g10700.1 vs. NCBI nr
Match: XP_022955129.1 (uncharacterized protein LOC111457189 isoform X1 [Cucurbita moschata]) HSP 1 Score: 583 bits (1504), Expect = 2.99e-209 Identity = 290/344 (84.30%), Postives = 291/344 (84.59%), Query Frame = 0
BLAST of Cp4.1LG09g10700.1 vs. NCBI nr
Match: XP_022994637.1 (uncharacterized protein LOC111490289 isoform X1 [Cucurbita maxima]) HSP 1 Score: 568 bits (1464), Expect = 3.22e-203 Identity = 285/344 (82.85%), Postives = 287/344 (83.43%), Query Frame = 0
BLAST of Cp4.1LG09g10700.1 vs. NCBI nr
Match: XP_022955130.1 (uncharacterized protein LOC111457189 isoform X2 [Cucurbita moschata]) HSP 1 Score: 561 bits (1445), Expect = 2.26e-200 Identity = 283/344 (82.27%), Postives = 284/344 (82.56%), Query Frame = 0
BLAST of Cp4.1LG09g10700.1 vs. ExPASy TrEMBL
Match: A0A6J1GV34 (uncharacterized protein LOC111457189 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457189 PE=4 SV=1) HSP 1 Score: 583 bits (1504), Expect = 1.45e-209 Identity = 290/344 (84.30%), Postives = 291/344 (84.59%), Query Frame = 0
BLAST of Cp4.1LG09g10700.1 vs. ExPASy TrEMBL
Match: A0A6J1JWF3 (uncharacterized protein LOC111490289 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490289 PE=4 SV=1) HSP 1 Score: 568 bits (1464), Expect = 1.56e-203 Identity = 285/344 (82.85%), Postives = 287/344 (83.43%), Query Frame = 0
BLAST of Cp4.1LG09g10700.1 vs. ExPASy TrEMBL
Match: A0A6J1GUB6 (uncharacterized protein LOC111457189 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457189 PE=4 SV=1) HSP 1 Score: 561 bits (1445), Expect = 1.10e-200 Identity = 283/344 (82.27%), Postives = 284/344 (82.56%), Query Frame = 0
BLAST of Cp4.1LG09g10700.1 vs. ExPASy TrEMBL
Match: A0A6J1K5Q3 (uncharacterized protein LOC111490289 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111490289 PE=4 SV=1) HSP 1 Score: 545 bits (1405), Expect = 1.18e-194 Identity = 278/344 (80.81%), Postives = 280/344 (81.40%), Query Frame = 0
BLAST of Cp4.1LG09g10700.1 vs. ExPASy TrEMBL
Match: A0A5D3BL53 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002890 PE=4 SV=1) HSP 1 Score: 501 bits (1291), Expect = 3.51e-177 Identity = 250/344 (72.67%), Postives = 266/344 (77.33%), Query Frame = 0
BLAST of Cp4.1LG09g10700.1 vs. TAIR 10
Match: AT1G03610.1 (Protein of unknown function (DUF789) ) HSP 1 Score: 276.9 bits (707), Expect = 1.8e-74 Identity = 145/306 (47.39%), Postives = 181/306 (59.15%), Query Frame = 0
BLAST of Cp4.1LG09g10700.1 vs. TAIR 10
Match: AT4G03420.1 (Protein of unknown function (DUF789) ) HSP 1 Score: 270.8 bits (691), Expect = 1.3e-72 Identity = 146/315 (46.35%), Postives = 185/315 (58.73%), Query Frame = 0
BLAST of Cp4.1LG09g10700.1 vs. TAIR 10
Match: AT1G17830.1 (Protein of unknown function (DUF789) ) HSP 1 Score: 269.2 bits (687), Expect = 3.8e-72 Identity = 149/338 (44.08%), Postives = 198/338 (58.58%), Query Frame = 0
BLAST of Cp4.1LG09g10700.1 vs. TAIR 10
Match: AT1G73210.1 (Protein of unknown function (DUF789) ) HSP 1 Score: 253.4 bits (646), Expect = 2.2e-67 Identity = 146/330 (44.24%), Postives = 184/330 (55.76%), Query Frame = 0
BLAST of Cp4.1LG09g10700.1 vs. TAIR 10
Match: AT1G73210.2 (Protein of unknown function (DUF789) ) HSP 1 Score: 252.7 bits (644), Expect = 3.7e-67 Identity = 146/330 (44.24%), Postives = 183/330 (55.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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