Cp4.1LG09g09120.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG09g09120.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	tyrosyl-DNA phosphodiesterase 2
Location	Cp4.1LG09: 8274536 .. 8278221 (+)
Sequence length	1617
RNA-Seq Expression	Cp4.1LG09g09120.1
Synteny	Cp4.1LG09g09120.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATCGGCCAAACGACATGTCGTCCGATGTTTCACGTAGATTAAAACGACGATTGAATCGGAACTCGAAGCGGCAAAAATCGAGCAAATCGTTGATGTTTCAATCAATAGCACATTCACTATCTTTCTCAAGCGCCCGCTTTCTTCATCGCTCGGTGATTAATCGTCGAACGATTTGCAGTCTATCTGTGTCGATGTCTAGTTGGTCCTGCAAAAAATGCACATTCCTCAACCCACCTTCCCAAAAGGCAGCCTGCAAAATCTGTCTATCTCCTTCATCGCCACCGCCATCACCGTCTTCTTCCTCCGCCCCTCAATGGTCCTGCAAGGCCTGCACCTTCCTGAACCCATATAAGAATTCCGATTGCGAACTCTGTGGCACTAGGGCTCCGTCCCTCTCGCTTTCGAGTTTCAAGGATTTGATCGATGTCAGCGAGGATGCGGATGCGGATTCTTCTGTTGGGTCTGTGTTCTTTCCCTTGCAGCCCTGCAAGAAAAGGAAACTAGACGATCCTGTTCCTGTGGTGGGTGGTGACAATTTCGCTGAATTGGGCGCATTTCGTGGCATTAAGGCATCGACTAACACTATTGCTGAAATGGGTTAGTCTTATTGTGTTGATTTTGTGTGTCAATATTATCGTTTTTTCAAGAACAATGTAGTTTGAAGTTGTATTAATGGGTTAGTCTTATTGTGTTGATGGGTGGCAGGGGATTCTAGTTCTAGGACAAGTTTGACACCCATAAAGATTTTGACTTACAATGTATGGTTCCGAGAAGATTTGGAGATGCGTAATAGAATGAGAGCCCTTGGACAACTTATCCAACGGCATTCACCAGATGTTATTTGTTTCCAGGTACTCCCTCAGTTTCATACACGTGTTGTGTGAGAGGAAGGAACCATTCCTTATAACAATGTGGAAAACTCTCCTACACTCTCTCTAGTAGACTCGTTTTAAAATTGTGAGGCTGACGGCCATACGTAACGGGCCAAAATGGACAATATTTACTAGCGGTGCACTTGAGCTGTTACAAATGGTATCAGACCCGGACACTGGATTGTGTGCCAACGAAGATGTTGGGCTCTCAAGGGGTGGATTGTGAGATCCCACTTGGAGAGGGGGAAGGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTAAATGCGTTTTAAACCGTGAGACTGACGACGATACGTAACGGGCCAAAACAGACAATATTTGCTAGTGGTGGACTTAGGCGATTACAAATGGTATCAGAGCCAGATACCGGGTGGTGTGCCAATGAGGGGGTGGATTGTGAGATCTCACCTGGAGAGGGGAACGAACCATTCCTTATAAGGGTGTGGAAACCTCTCCTTAGCATACGCGTTTTAAAACCGTGAGGTTGACGGCGATACGTAACGGGTCAAAACGAACAATATTTGCTAGCGGTGGACTTGAGCCGTTACATTTTGAGTTTCTAGAATTTTGGTTCGTGATGCATTCTTTTACGTTTACAATGTGTTGCAGGAAGTTACTCCAGATATATATAACATCTTCCAGATTACCAATTGGTGGAAAGTTTATCGCTGCTCGGTCAAGAAGGATGCTCATTCAAGGGGATACTTTTGTATGCTGGTGAGCTTTTTGTTACCTCCTTTGCTTGATATTTCATTTCCTACACAAATGAAAGCATATTTTGGCTTCTGGGTGAAGTATAGTTTTTATAATGGATATGGTTGATGAAATGATGTCAAATTGACTCCCCCACGAAACTAGCAAAGATAGCCCTTCCAGCCAACAACCCAAGTCCACCGCTAGCTAATAATGTCTGTTTTTAGCTCGTTACGTATCGTCGTCAACCTCACGATTCTAAAACGCATTTGTTAGGGAGAAGTTTCCACATCCTAATAACGAATGCTTCGTTCACCTCTCCAACCGATGTGGGATCTCACAATCCAACCCCTTTGGGGCCTAGCGTTCTCGCTAGCACACTGCCCGATGTTTGGCTCTGATACCATTTGTAATAGCCTAAGCCCACTACTAGCATATATTGTCTGTCTGGGCTCGTTATGTATCGCCGTTAGCCTCACAATTTTAAAACACGTATGTTAGGGAGAGGTTTCCACACCCTAATAAGAAATACTTCGTTCACCTCTCCAACCGATATGGGATCTCACAATCCTCCCCCCTTGGAGCCAGCATCCTCGTTGGCACATCACCTGGTGTTTGGCTCTGATACCATTTGTAACAGCCCAAGCGCACCACTAGCATATATTGTCTATCTTGGCCCGTTATGTATCGCTGTTAGCCTTACGGTTTTAAAACGCGTCTGTTAGGGTGAGGTTTCCACACCCTAATAAGAAACACTTCGTTCACCTCTCCAACCGATGTGGGATTTCACAATCCACCCCTCTTGGGGCCCAACGTCCGGCTCTGATACCATTTGTAACAGCCCAAGCCCACTACTAGCATATATTGTCTGTCTTGGCCCATTACATATCACCGTTAGCTTCACAGTTTTAAAACGCGTCTGTTAGGGAGAGGTTTCCACATCCTAATAAGGAATGCTTTGTTCACATCTCCAACGGATGTGAGATCTCACAATTACAAAAGCTAGCATTCTCAACGGCCACAGCAGCCCTTTTCAAAATCCGTAGAGTATAAGCATAGGTTTTGTGTACTGTTATACATATCTTCTAATCTTATCCTCGTTCTAGTTCTTATGTCGTCTGCACAGAACGGTAGAATACGAGAGTGGTGAACCTGTTATTTCTCTAGAACTATGCTTCATTTCAGCGTTTTGCATCATAAACTGATGATATAATTTATCCATTTACTGAGCAGTTGAGCAAACTGCCGGTGAAATCCTTCAGTTGTCAACCATTTTCCAATTCCATAATGGGGAGAGAACTCTGCGTTGCCAATCTTGAAGTTCAAAATGGCCTTTCATTGACAGTAGCAACAAGCCATCTTGAGAGTCCTTGCCCTGCACCTCCAAAGTGGAATCAAATGTACAGCAAAGAGCGTGTAATTCAAGCCAAAGAAGCCATCGACTTTCTCAAGGAAAATCCGAACGTCGTTTTTGGCGGTGACATGAACTGGGACGATAAGTCGGATGGTCAGTTTCCTTTTCCCGACGACTGGATTGATGCCTGGGAAGAATTACGCCCCGGTGAAAATGGTTGGACATACGATACCAAATCGAACAAGATGTTATCTGGGAACCGTACGCTGCAAAGGCGTCTGGATCGATTCGTTTGTAAGTTACAAGATTTCAAGGTAAGTTCCATTGTAATGATTGGGACTGATCCAATTCCTGAATTAACATACACAAAGGAGAAGAAAGTAGGTAAAGAAATGAAGATGCTTGAGCTCCCTGTTTTGCCCAGTGATCATTATGGCCTGCTGTTGACAATTAGCAGCCTGTAATCTGATGTTTTTTTAGTTAGTTTTGTGTGGTGGAAGCCTGCTGGAATCGTTTTTTTGTTCATTTGCAGTGCTTAAAAATGCATGCTTCATGGTATGCGATTTTGTATGTAGCTTAGAACCAAACAATGGTTCCCAAGATCTTGGATGGTTCCCAGCATCAGTGTATCTAAACTCATATGCTAAATCTTGAACTGCTCCTTTGTTCCATGTCTGCTCGTTTTGCCCATTTTGAGATATGGATTGTTGCCTAACAAATGAGTGAAATTTGACCCG

mRNA sequence

TATCGGCCAAACGACATGTCGTCCGATGTTTCACGTAGATTAAAACGACGATTGAATCGGAACTCGAAGCGGCAAAAATCGAGCAAATCGTTGATGTTTCAATCAATAGCACATTCACTATCTTTCTCAAGCGCCCGCTTTCTTCATCGCTCGGTGATTAATCGTCGAACGATTTGCAGTCTATCTGTGTCGATGTCTAGTTGGTCCTGCAAAAAATGCACATTCCTCAACCCACCTTCCCAAAAGGCAGCCTGCAAAATCTGTCTATCTCCTTCATCGCCACCGCCATCACCGTCTTCTTCCTCCGCCCCTCAATGGTCCTGCAAGGCCTGCACCTTCCTGAACCCATATAAGAATTCCGATTGCGAACTCTGTGGCACTAGGGCTCCGTCCCTCTCGCTTTCGAGTTTCAAGGATTTGATCGATGTCAGCGAGGATGCGGATGCGGATTCTTCTGTTGGGTCTGTGTTCTTTCCCTTGCAGCCCTGCAAGAAAAGGAAACTAGACGATCCTGTTCCTGTGGTGGGTGGTGACAATTTCGCTGAATTGGGCGCATTTCGTGGCATTAAGGCATCGACTAACACTATTGCTGAAATGGGGGATTCTAGTTCTAGGACAAGTTTGACACCCATAAAGATTTTGACTTACAATGAAGTTACTCCAGATATATATAACATCTTCCAGATTACCAATTGGTGGAAAGTTTATCGCTGCTCGGTCAAGAAGGATGCTCATTCAAGGGGATACTTTTGTATGCTGTTGAGCAAACTGCCGGTGAAATCCTTCAGTTGTCAACCATTTTCCAATTCCATAATGGGGAGAGAACTCTGCGTTGCCAATCTTGAAGTTCAAAATGGCCTTTCATTGACAGTAGCAACAAGCCATCTTGAGAGTCCTTGCCCTGCACCTCCAAAGTGGAATCAAATGTACAGCAAAGAGCGTGTAATTCAAGCCAAAGAAGCCATCGACTTTCTCAAGGAAAATCCGAACGTCGTTTTTGGCGGTGACATGAACTGGGACGATAAGTCGGATGGTCAGTTTCCTTTTCCCGACGACTGGATTGATGCCTGGGAAGAATTACGCCCCGGTGAAAATGGTTGGACATACGATACCAAATCGAACAAGATGTTATCTGGGAACCGTACGCTGCAAAGGCGTCTGGATCGATTCGTTTGTAAGTTACAAGATTTCAAGGTAAGTTCCATTGTAATGATTGGGACTGATCCAATTCCTGAATTAACATACACAAAGGAGAAGAAAGTAGGTAAAGAAATGAAGATGCTTGAGCTCCCTGTTTTGCCCAGTGATCATTATGGCCTGCTGTTGACAATTAGCAGCCTGTAATCTGATGTTTTTTTAGTTAGTTTTGTGTGGTGGAAGCCTGCTGGAATCGTTTTTTTGTTCATTTGCAGTGCTTAAAAATGCATGCTTCATGGTATGCGATTTTGTATGTAGCTTAGAACCAAACAATGGTTCCCAAGATCTTGGATGGTTCCCAGCATCAGTGTATCTAAACTCATATGCTAAATCTTGAACTGCTCCTTTGTTCCATGTCTGCTCGTTTTGCCCATTTTGAGATATGGATTGTTGCCTAACAAATGAGTGAAATTTGACCCG

Coding sequence (CDS)

ATGTCGTCCGATGTTTCACGTAGATTAAAACGACGATTGAATCGGAACTCGAAGCGGCAAAAATCGAGCAAATCGTTGATGTTTCAATCAATAGCACATTCACTATCTTTCTCAAGCGCCCGCTTTCTTCATCGCTCGGTGATTAATCGTCGAACGATTTGCAGTCTATCTGTGTCGATGTCTAGTTGGTCCTGCAAAAAATGCACATTCCTCAACCCACCTTCCCAAAAGGCAGCCTGCAAAATCTGTCTATCTCCTTCATCGCCACCGCCATCACCGTCTTCTTCCTCCGCCCCTCAATGGTCCTGCAAGGCCTGCACCTTCCTGAACCCATATAAGAATTCCGATTGCGAACTCTGTGGCACTAGGGCTCCGTCCCTCTCGCTTTCGAGTTTCAAGGATTTGATCGATGTCAGCGAGGATGCGGATGCGGATTCTTCTGTTGGGTCTGTGTTCTTTCCCTTGCAGCCCTGCAAGAAAAGGAAACTAGACGATCCTGTTCCTGTGGTGGGTGGTGACAATTTCGCTGAATTGGGCGCATTTCGTGGCATTAAGGCATCGACTAACACTATTGCTGAAATGGGGGATTCTAGTTCTAGGACAAGTTTGACACCCATAAAGATTTTGACTTACAATGAAGTTACTCCAGATATATATAACATCTTCCAGATTACCAATTGGTGGAAAGTTTATCGCTGCTCGGTCAAGAAGGATGCTCATTCAAGGGGATACTTTTGTATGCTGTTGAGCAAACTGCCGGTGAAATCCTTCAGTTGTCAACCATTTTCCAATTCCATAATGGGGAGAGAACTCTGCGTTGCCAATCTTGAAGTTCAAAATGGCCTTTCATTGACAGTAGCAACAAGCCATCTTGAGAGTCCTTGCCCTGCACCTCCAAAGTGGAATCAAATGTACAGCAAAGAGCGTGTAATTCAAGCCAAAGAAGCCATCGACTTTCTCAAGGAAAATCCGAACGTCGTTTTTGGCGGTGACATGAACTGGGACGATAAGTCGGATGGTCAGTTTCCTTTTCCCGACGACTGGATTGATGCCTGGGAAGAATTACGCCCCGGTGAAAATGGTTGGACATACGATACCAAATCGAACAAGATGTTATCTGGGAACCGTACGCTGCAAAGGCGTCTGGATCGATTCGTTTGTAAGTTACAAGATTTCAAGGTAAGTTCCATTGTAATGATTGGGACTGATCCAATTCCTGAATTAACATACACAAAGGAGAAGAAAGTAGGTAAAGAAATGAAGATGCTTGAGCTCCCTGTTTTGCCCAGTGATCATTATGGCCTGCTGTTGACAATTAGCAGCCTGTAA

Protein sequence

MSSDVSRRLKRRLNRNSKRQKSSKSLMFQSIAHSLSFSSARFLHRSVINRRTICSLSVSMSSWSCKKCTFLNPPSQKAACKICLSPSSPPPSPSSSSAPQWSCKACTFLNPYKNSDCELCGTRAPSLSLSSFKDLIDVSEDADADSSVGSVFFPLQPCKKRKLDDPVPVVGGDNFAELGAFRGIKASTNTIAEMGDSSSRTSLTPIKILTYNEVTPDIYNIFQITNWWKVYRCSVKKDAHSRGYFCMLLSKLPVKSFSCQPFSNSIMGRELCVANLEVQNGLSLTVATSHLESPCPAPPKWNQMYSKERVIQAKEAIDFLKENPNVVFGGDMNWDDKSDGQFPFPDDWIDAWEELRPGENGWTYDTKSNKMLSGNRTLQRRLDRFVCKLQDFKVSSIVMIGTDPIPELTYTKEKKVGKEMKMLELPVLPSDHYGLLLTISSL

Homology

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BLAST of Cp4.1LG09g09120.1 vs. ExPASy Swiss-Prot
Match: Q9JLG8 (Calpain-15 OS=Mus musculus OX=10090 GN=Capn15 PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 5.0e-04
Identity = 26/67 (38.81%), Postives = 33/67 (49.25%), Query Frame = 0


Query: 59  SMSSWSCKKCTFLNPPSQKAACKICLSPSSPPPSPS----SSSAPQWSCKACTFLNPYKN 118
           ++  WSC +CTFLNP  Q+  C IC +P   P        S    +W C  CTF N    
Sbjct: 3   TVGEWSCARCTFLNPAGQR-QCSICEAPRHKPDLDQILRLSVEEQKWPCARCTFRNFLGK 62

Query: 119 SDCELCG 122
             CE+CG
Sbjct: 63  EACEVCG 68

[Close]

BLAST of Cp4.1LG09g09120.1 vs. NCBI nr
Match: XP_023542187.1 (uncharacterized protein LOC111802155 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 868 bits (2243), Expect = 0.0
Identity = 442/473 (93.45%), Postives = 442/473 (93.45%), Query Frame = 0


Query: 1   MSSDVSRRLKRRLNRNSKRQKSSKSLMFQSIAHSLSFSSARFLHRSVINRRTICSLSVSM 60
           MSSDVSRRLKRRLNRNSKRQKSSKSLMFQSIAHSLSFSSARFLHRSVINRRTICSLSVSM
Sbjct: 1   MSSDVSRRLKRRLNRNSKRQKSSKSLMFQSIAHSLSFSSARFLHRSVINRRTICSLSVSM 60

Query: 61  SSWSCKKCTFLNPPSQKAACKICLSPSSPPPSPSSSSAPQWSCKACTFLNPYKNSDCELC 120
           SSWSCKKCTFLNPPSQKAACKICLSPSSPPPSPSSSSAPQWSCKACTFLNPYKNSDCELC
Sbjct: 61  SSWSCKKCTFLNPPSQKAACKICLSPSSPPPSPSSSSAPQWSCKACTFLNPYKNSDCELC 120

Query: 121 GTRAPSLSLSSFKDLIDVSEDADADSSVGSVFFPLQPCKKRKLDDPVPVVGGDNFAELGA 180
           GTRAPSLSLSSFKDLIDVSEDADADSSVGSVFFPLQPCKKRKLDDPVPVVGGDNFAELGA
Sbjct: 121 GTRAPSLSLSSFKDLIDVSEDADADSSVGSVFFPLQPCKKRKLDDPVPVVGGDNFAELGA 180

Query: 181 FRGIKASTNTIAEMGDSSSRTSLTPIKILTYN---------------------------- 240
           FRGIKASTNTIAEMGDSSSRTSLTPIKILTYN                            
Sbjct: 181 FRGIKASTNTIAEMGDSSSRTSLTPIKILTYNVWFREDLEMRNRMRALGQLIQRHSPDVI 240

Query: 241 ---EVTPDIYNIFQITNWWKVYRCSVKKDAHSRGYFCMLLSKLPVKSFSCQPFSNSIMGR 300
              EVTPDIYNIFQITNWWKVYRCSVKKDAHSRGYFCMLLSKLPVKSFSCQPFSNSIMGR
Sbjct: 241 CFQEVTPDIYNIFQITNWWKVYRCSVKKDAHSRGYFCMLLSKLPVKSFSCQPFSNSIMGR 300

Query: 301 ELCVANLEVQNGLSLTVATSHLESPCPAPPKWNQMYSKERVIQAKEAIDFLKENPNVVFG 360
           ELCVANLEVQNGLSLTVATSHLESPCPAPPKWNQMYSKERVIQAKEAIDFLKENPNVVFG
Sbjct: 301 ELCVANLEVQNGLSLTVATSHLESPCPAPPKWNQMYSKERVIQAKEAIDFLKENPNVVFG 360

Query: 361 GDMNWDDKSDGQFPFPDDWIDAWEELRPGENGWTYDTKSNKMLSGNRTLQRRLDRFVCKL 420
           GDMNWDDKSDGQFPFPDDWIDAWEELRPGENGWTYDTKSNKMLSGNRTLQRRLDRFVCKL
Sbjct: 361 GDMNWDDKSDGQFPFPDDWIDAWEELRPGENGWTYDTKSNKMLSGNRTLQRRLDRFVCKL 420

Query: 421 QDFKVSSIVMIGTDPIPELTYTKEKKVGKEMKMLELPVLPSDHYGLLLTISSL 442
           QDFKVSSIVMIGTDPIPELTYTKEKKVGKEMKMLELPVLPSDHYGLLLTISSL
Sbjct: 421 QDFKVSSIVMIGTDPIPELTYTKEKKVGKEMKMLELPVLPSDHYGLLLTISSL 473

[Close]

BLAST of Cp4.1LG09g09120.1 vs. NCBI nr
Match: XP_022954436.1 (uncharacterized protein LOC111456698 [Cucurbita moschata])

HSP 1 Score: 847 bits (2187), Expect = 1.42e-308
Identity = 430/469 (91.68%), Postives = 434/469 (92.54%), Query Frame = 0


Query: 5   VSRRLKRRLNRNSKRQKSSKSLMFQSIAHSLSFSSARFLHRSVINRRTICSLSVSMSSWS 64
           VSRRLKRRLNRNSKRQKSSKSLMFQSIAHSLSFSSARFLHRSVINRRTICSLS+ MSSWS
Sbjct: 8   VSRRLKRRLNRNSKRQKSSKSLMFQSIAHSLSFSSARFLHRSVINRRTICSLSLPMSSWS 67

Query: 65  CKKCTFLNPPSQKAACKICLSPSSPPPSPSSSSAPQWSCKACTFLNPYKNSDCELCGTRA 124
           CKKCTFLNPPSQKAACKICLSPSSPPPSPSSSSA QWSCKACTFLNPYKNSDCELCGTRA
Sbjct: 68  CKKCTFLNPPSQKAACKICLSPSSPPPSPSSSSASQWSCKACTFLNPYKNSDCELCGTRA 127

Query: 125 PSLSLSSFKDLIDVSEDADADSSVGSVFFPLQPCKKRKLDDPVPVVGGDNFAELGAFRGI 184
           PSLSLSSFKDLIDVSEDADADSSVGSVFFPLQPCKKRKLDDPVPVVGG NFAELGAFRG+
Sbjct: 128 PSLSLSSFKDLIDVSEDADADSSVGSVFFPLQPCKKRKLDDPVPVVGGVNFAELGAFRGV 187

Query: 185 KASTNTIAEMGDSSSRTSLTPIKILTYN-------------------------------E 244
           KASTNTIAEMGDSSSRT+LTPIKILTYN                               E
Sbjct: 188 KASTNTIAEMGDSSSRTNLTPIKILTYNVWFREDLEMRNRMRALGQLIQRHSPDVICFQE 247

Query: 245 VTPDIYNIFQITNWWKVYRCSVKKDAHSRGYFCMLLSKLPVKSFSCQPFSNSIMGRELCV 304
           VTPDIYNIFQITNWWKVYRCSVKKDAHSRGYFCMLLSKLPVKSFSCQPFSNSIMGRELCV
Sbjct: 248 VTPDIYNIFQITNWWKVYRCSVKKDAHSRGYFCMLLSKLPVKSFSCQPFSNSIMGRELCV 307

Query: 305 ANLEVQNGLSLTVATSHLESPCPAPPKWNQMYSKERVIQAKEAIDFLKENPNVVFGGDMN 364
           ANLEVQNGLSLTVATSHLESPCPAPPKWNQMYSKERVIQAKEAIDFL ENPNVVFGGDMN
Sbjct: 308 ANLEVQNGLSLTVATSHLESPCPAPPKWNQMYSKERVIQAKEAIDFLNENPNVVFGGDMN 367

Query: 365 WDDKSDGQFPFPDDWIDAWEELRPGENGWTYDTKSNKMLSGNRTLQRRLDRFVCKLQDFK 424
           WDDKSDGQFPFPD+WIDAWEELRPGENGWTYDTKSNKMLSGNRTLQRRLDRFVCKLQDFK
Sbjct: 368 WDDKSDGQFPFPDNWIDAWEELRPGENGWTYDTKSNKMLSGNRTLQRRLDRFVCKLQDFK 427

Query: 425 VSSIVMIGTDPIPELTYTKEKKVGKEMKMLELPVLPSDHYGLLLTISSL 442
           VSSIVMIGTDPIPELTYTKEKKVGKEMKMLELPVLPSDHYGLLLTISSL
Sbjct: 428 VSSIVMIGTDPIPELTYTKEKKVGKEMKMLELPVLPSDHYGLLLTISSL 476

[Close]

BLAST of Cp4.1LG09g09120.1 vs. NCBI nr
Match: KAG6573182.1 (Tyrosyl-DNA phosphodiesterase 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 846 bits (2185), Expect = 2.87e-308
Identity = 430/469 (91.68%), Postives = 432/469 (92.11%), Query Frame = 0


Query: 5   VSRRLKRRLNRNSKRQKSSKSLMFQSIAHSLSFSSARFLHRSVINRRTICSLSVSMSSWS 64
           VS RLKRRLNRNSKRQKSSKSLMFQSIAHSLSFSSARFLHRSVINRRTICSLS+ MSSWS
Sbjct: 8   VSSRLKRRLNRNSKRQKSSKSLMFQSIAHSLSFSSARFLHRSVINRRTICSLSLPMSSWS 67

Query: 65  CKKCTFLNPPSQKAACKICLSPSSPPPSPSSSSAPQWSCKACTFLNPYKNSDCELCGTRA 124
           CKKCTFLNPPSQKAACKICLSPSSPPPSPSSSSAPQWSCKACTFLNPYKNSDCELCGTRA
Sbjct: 68  CKKCTFLNPPSQKAACKICLSPSSPPPSPSSSSAPQWSCKACTFLNPYKNSDCELCGTRA 127

Query: 125 PSLSLSSFKDLIDVSEDADADSSVGSVFFPLQPCKKRKLDDPVPVVGGDNFAELGAFRGI 184
           PSLSLSSFKDLIDVSEDADADSSVGSVFFPLQPCKKRKLDDPVPVVGG NFAELGAFRG+
Sbjct: 128 PSLSLSSFKDLIDVSEDADADSSVGSVFFPLQPCKKRKLDDPVPVVGGVNFAELGAFRGV 187

Query: 185 KASTNTIAEMGDSSSRTSLTPIKILTYN-------------------------------E 244
           KASTNTIAEMGDSSSRTSL PIKILTYN                               E
Sbjct: 188 KASTNTIAEMGDSSSRTSLIPIKILTYNVWFREDLEMRNRMRALGQLIQRHSPDVICFQE 247

Query: 245 VTPDIYNIFQITNWWKVYRCSVKKDAHSRGYFCMLLSKLPVKSFSCQPFSNSIMGRELCV 304
           VTPDIYNIFQITNWWKVYRCSVKKDAHSRGYFCMLLSKLPVKSFSCQPFSNSIMGRELCV
Sbjct: 248 VTPDIYNIFQITNWWKVYRCSVKKDAHSRGYFCMLLSKLPVKSFSCQPFSNSIMGRELCV 307

Query: 305 ANLEVQNGLSLTVATSHLESPCPAPPKWNQMYSKERVIQAKEAIDFLKENPNVVFGGDMN 364
           ANLEVQNGLSLTVATSHLESPCPAPPKWNQMYSKERVIQAKEAIDFL ENPNVVFGGDMN
Sbjct: 308 ANLEVQNGLSLTVATSHLESPCPAPPKWNQMYSKERVIQAKEAIDFLNENPNVVFGGDMN 367

Query: 365 WDDKSDGQFPFPDDWIDAWEELRPGENGWTYDTKSNKMLSGNRTLQRRLDRFVCKLQDFK 424
           WDDK DGQFPFPDDWIDAWEELRPGENGWTYDTKSNKMLSGNRTLQRRLDRFVCKLQDFK
Sbjct: 368 WDDKLDGQFPFPDDWIDAWEELRPGENGWTYDTKSNKMLSGNRTLQRRLDRFVCKLQDFK 427

Query: 425 VSSIVMIGTDPIPELTYTKEKKVGKEMKMLELPVLPSDHYGLLLTISSL 442
           VSSIVMIGTDPIPELTYTKEKKVGKEMKMLELPVLPSDHYGLLLTISSL
Sbjct: 428 VSSIVMIGTDPIPELTYTKEKKVGKEMKMLELPVLPSDHYGLLLTISSL 476

[Close]

BLAST of Cp4.1LG09g09120.1 vs. NCBI nr
Match: XP_022994193.1 (uncharacterized protein LOC111490005 [Cucurbita maxima])

HSP 1 Score: 813 bits (2099), Expect = 1.22e-295
Identity = 407/447 (91.05%), Postives = 410/447 (91.72%), Query Frame = 0


Query: 27  MFQSIAHSLSFSSARFLHRSVINRRTICSLSVSMSSWSCKKCTFLNPPSQKAACKICLSP 86
           MFQSIA SLSFSSARFLHRSVINRRT CSLSV MSSWSCKKCTFLNPPSQKAACKICLSP
Sbjct: 1   MFQSIARSLSFSSARFLHRSVINRRTFCSLSVPMSSWSCKKCTFLNPPSQKAACKICLSP 60

Query: 87  SSPPPSPSSSSAPQWSCKACTFLNPYKNSDCELCGTRAPSLSLSSFKDLIDVSEDADADS 146
           SSPPPSPSSSSAPQWSCKACTFLNPYKNSDCELCGTRAPSLSLSSFKDLIDVSEDADADS
Sbjct: 61  SSPPPSPSSSSAPQWSCKACTFLNPYKNSDCELCGTRAPSLSLSSFKDLIDVSEDADADS 120

Query: 147 SVGSVFFPLQPCKKRKLDDPVPVVGGDNFAELGAFRGIKASTNTIAEMGDSSSRTSLTPI 206
           SVGSVFFPLQPCKKRKLDDPVPVVGGDNFAELGAFRG+KAS NTIAEMGDSSSRTSLTPI
Sbjct: 121 SVGSVFFPLQPCKKRKLDDPVPVVGGDNFAELGAFRGVKASANTIAEMGDSSSRTSLTPI 180

Query: 207 KILTYN-------------------------------EVTPDIYNIFQITNWWKVYRCSV 266
           KILTYN                               EVTPDIYNIFQITNWWKVYRCSV
Sbjct: 181 KILTYNVWFREDLEMRNRMRALGQLIQRHSPDVICFQEVTPDIYNIFQITNWWKVYRCSV 240

Query: 267 KKDAHSRGYFCMLLSKLPVKSFSCQPFSNSIMGRELCVANLEVQNGLSLTVATSHLESPC 326
           KKDAHSRGYFCMLLSKLPVKSFSCQPFSNSIMGRELC+ANLEVQNGLSLTVATSHLESPC
Sbjct: 241 KKDAHSRGYFCMLLSKLPVKSFSCQPFSNSIMGRELCIANLEVQNGLSLTVATSHLESPC 300

Query: 327 PAPPKWNQMYSKERVIQAKEAIDFLKENPNVVFGGDMNWDDKSDGQFPFPDDWIDAWEEL 386
           PAPPKWNQMYSKERVIQAKEAI+FLKENPNVVFGGDMNWDDK DGQFPFPDDWIDAWEEL
Sbjct: 301 PAPPKWNQMYSKERVIQAKEAINFLKENPNVVFGGDMNWDDKLDGQFPFPDDWIDAWEEL 360

Query: 387 RPGENGWTYDTKSNKMLSGNRTLQRRLDRFVCKLQDFKVSSIVMIGTDPIPELTYTKEKK 442
            PGENGWTYDTKSNKMLSGNRTLQRRLDRFVCKLQDFKVSSIVMIGTDPIPELTYTKEKK
Sbjct: 361 HPGENGWTYDTKSNKMLSGNRTLQRRLDRFVCKLQDFKVSSIVMIGTDPIPELTYTKEKK 420

[Close]

BLAST of Cp4.1LG09g09120.1 vs. NCBI nr
Match: KAG7012360.1 (Tyrosyl-DNA phosphodiesterase 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 764 bits (1972), Expect = 6.51e-277
Identity = 393/438 (89.73%), Postives = 396/438 (90.41%), Query Frame = 0


Query: 5   VSRRLKRRLNRNSKRQKSSKSLMFQSIAHSLSFSSARFLHRSVINRRTICSLSVSMSSWS 64
           VS RLKRRLNRNSKRQKSSKSLMFQSIAHSLSFSSARFLHRSVINRRTICSLS+ MSSWS
Sbjct: 8   VSSRLKRRLNRNSKRQKSSKSLMFQSIAHSLSFSSARFLHRSVINRRTICSLSLPMSSWS 67

Query: 65  CKKCTFLNPPSQKAACKICLSPSSPPPSPSSSSAPQWSCKACTFLNPYKNSDCELCGTRA 124
           CKKCTFLNPPSQKAACKICLSPSSPPPSPSSSSAPQWSCKACTFLNPYKNSDCELCGTRA
Sbjct: 68  CKKCTFLNPPSQKAACKICLSPSSPPPSPSSSSAPQWSCKACTFLNPYKNSDCELCGTRA 127

Query: 125 PSLSLSSFKDLIDVSEDADADSSVGSVFFPLQPCKKRKLDDPVPVVGGDNFAELGAFRGI 184
           PSLSLSSFKDLIDVSEDADADSSVGSVFFPLQPCKKRKLDDPVPVVGG NFAELGAFRG+
Sbjct: 128 PSLSLSSFKDLIDVSEDADADSSVGSVFFPLQPCKKRKLDDPVPVVGGVNFAELGAFRGV 187

Query: 185 KASTNTIAEMGDSSSRTSLTPIKILTYNEVTPDIYNIFQITNWWKVYRCSVKKDAHSRGY 244
           KASTNTIAEMGDSSSRTSL PIKILTYN                                
Sbjct: 188 KASTNTIAEMGDSSSRTSLIPIKILTYN-------------------------------- 247

Query: 245 FCMLLSKLPVKSFSCQPFSNSIMGRELCVANLEVQNGLSLTVATSHLESPCPAPPKWNQM 304
               LSKLPVKSFSCQPF NSIMGRELC+ANLEVQNGLSLTVATSHLESPCPAPPKWNQM
Sbjct: 248 ----LSKLPVKSFSCQPFPNSIMGRELCIANLEVQNGLSLTVATSHLESPCPAPPKWNQM 307

Query: 305 YSKERVIQAKEAIDFLKENPNVVFGGDMNWDDKSDGQFPFPDDWIDAWEELRPGENGWTY 364
           YSKERVIQAKEAIDFLKENPNVVFGGDMNWDDK DGQFPFPDDWIDAWEELRPGENGWTY
Sbjct: 308 YSKERVIQAKEAIDFLKENPNVVFGGDMNWDDKLDGQFPFPDDWIDAWEELRPGENGWTY 367

Query: 365 DTKSNKMLSGNRTLQRRLDRFVCKLQDFKVSSIVMIGTDPIPELTYTKEKKVGKEMKMLE 424
           DTKSNKMLSGNRTLQRRLDRFVCKLQDFKVSSIVMIGTDPIPELTYTKEKKVGKEMKMLE
Sbjct: 368 DTKSNKMLSGNRTLQRRLDRFVCKLQDFKVSSIVMIGTDPIPELTYTKEKKVGKEMKMLE 409

Query: 425 LPVLPSDHYGLLLTISSL 442
           LPVLPSDHYGLLLTISSL
Sbjct: 428 LPVLPSDHYGLLLTISSL 409

[Close]

BLAST of Cp4.1LG09g09120.1 vs. ExPASy TrEMBL
Match: A0A6J1GQX2 (uncharacterized protein LOC111456698 OS=Cucurbita moschata OX=3662 GN=LOC111456698 PE=4 SV=1)

HSP 1 Score: 847 bits (2187), Expect = 6.89e-309
Identity = 430/469 (91.68%), Postives = 434/469 (92.54%), Query Frame = 0


Query: 5   VSRRLKRRLNRNSKRQKSSKSLMFQSIAHSLSFSSARFLHRSVINRRTICSLSVSMSSWS 64
           VSRRLKRRLNRNSKRQKSSKSLMFQSIAHSLSFSSARFLHRSVINRRTICSLS+ MSSWS
Sbjct: 8   VSRRLKRRLNRNSKRQKSSKSLMFQSIAHSLSFSSARFLHRSVINRRTICSLSLPMSSWS 67

Query: 65  CKKCTFLNPPSQKAACKICLSPSSPPPSPSSSSAPQWSCKACTFLNPYKNSDCELCGTRA 124
           CKKCTFLNPPSQKAACKICLSPSSPPPSPSSSSA QWSCKACTFLNPYKNSDCELCGTRA
Sbjct: 68  CKKCTFLNPPSQKAACKICLSPSSPPPSPSSSSASQWSCKACTFLNPYKNSDCELCGTRA 127

Query: 125 PSLSLSSFKDLIDVSEDADADSSVGSVFFPLQPCKKRKLDDPVPVVGGDNFAELGAFRGI 184
           PSLSLSSFKDLIDVSEDADADSSVGSVFFPLQPCKKRKLDDPVPVVGG NFAELGAFRG+
Sbjct: 128 PSLSLSSFKDLIDVSEDADADSSVGSVFFPLQPCKKRKLDDPVPVVGGVNFAELGAFRGV 187

Query: 185 KASTNTIAEMGDSSSRTSLTPIKILTYN-------------------------------E 244
           KASTNTIAEMGDSSSRT+LTPIKILTYN                               E
Sbjct: 188 KASTNTIAEMGDSSSRTNLTPIKILTYNVWFREDLEMRNRMRALGQLIQRHSPDVICFQE 247

Query: 245 VTPDIYNIFQITNWWKVYRCSVKKDAHSRGYFCMLLSKLPVKSFSCQPFSNSIMGRELCV 304
           VTPDIYNIFQITNWWKVYRCSVKKDAHSRGYFCMLLSKLPVKSFSCQPFSNSIMGRELCV
Sbjct: 248 VTPDIYNIFQITNWWKVYRCSVKKDAHSRGYFCMLLSKLPVKSFSCQPFSNSIMGRELCV 307

Query: 305 ANLEVQNGLSLTVATSHLESPCPAPPKWNQMYSKERVIQAKEAIDFLKENPNVVFGGDMN 364
           ANLEVQNGLSLTVATSHLESPCPAPPKWNQMYSKERVIQAKEAIDFL ENPNVVFGGDMN
Sbjct: 308 ANLEVQNGLSLTVATSHLESPCPAPPKWNQMYSKERVIQAKEAIDFLNENPNVVFGGDMN 367

Query: 365 WDDKSDGQFPFPDDWIDAWEELRPGENGWTYDTKSNKMLSGNRTLQRRLDRFVCKLQDFK 424
           WDDKSDGQFPFPD+WIDAWEELRPGENGWTYDTKSNKMLSGNRTLQRRLDRFVCKLQDFK
Sbjct: 368 WDDKSDGQFPFPDNWIDAWEELRPGENGWTYDTKSNKMLSGNRTLQRRLDRFVCKLQDFK 427

Query: 425 VSSIVMIGTDPIPELTYTKEKKVGKEMKMLELPVLPSDHYGLLLTISSL 442
           VSSIVMIGTDPIPELTYTKEKKVGKEMKMLELPVLPSDHYGLLLTISSL
Sbjct: 428 VSSIVMIGTDPIPELTYTKEKKVGKEMKMLELPVLPSDHYGLLLTISSL 476

[Close]

BLAST of Cp4.1LG09g09120.1 vs. ExPASy TrEMBL
Match: A0A6J1K4H6 (uncharacterized protein LOC111490005 OS=Cucurbita maxima OX=3661 GN=LOC111490005 PE=4 SV=1)

HSP 1 Score: 813 bits (2099), Expect = 5.90e-296
Identity = 407/447 (91.05%), Postives = 410/447 (91.72%), Query Frame = 0


Query: 27  MFQSIAHSLSFSSARFLHRSVINRRTICSLSVSMSSWSCKKCTFLNPPSQKAACKICLSP 86
           MFQSIA SLSFSSARFLHRSVINRRT CSLSV MSSWSCKKCTFLNPPSQKAACKICLSP
Sbjct: 1   MFQSIARSLSFSSARFLHRSVINRRTFCSLSVPMSSWSCKKCTFLNPPSQKAACKICLSP 60

Query: 87  SSPPPSPSSSSAPQWSCKACTFLNPYKNSDCELCGTRAPSLSLSSFKDLIDVSEDADADS 146
           SSPPPSPSSSSAPQWSCKACTFLNPYKNSDCELCGTRAPSLSLSSFKDLIDVSEDADADS
Sbjct: 61  SSPPPSPSSSSAPQWSCKACTFLNPYKNSDCELCGTRAPSLSLSSFKDLIDVSEDADADS 120

Query: 147 SVGSVFFPLQPCKKRKLDDPVPVVGGDNFAELGAFRGIKASTNTIAEMGDSSSRTSLTPI 206
           SVGSVFFPLQPCKKRKLDDPVPVVGGDNFAELGAFRG+KAS NTIAEMGDSSSRTSLTPI
Sbjct: 121 SVGSVFFPLQPCKKRKLDDPVPVVGGDNFAELGAFRGVKASANTIAEMGDSSSRTSLTPI 180

Query: 207 KILTYN-------------------------------EVTPDIYNIFQITNWWKVYRCSV 266
           KILTYN                               EVTPDIYNIFQITNWWKVYRCSV
Sbjct: 181 KILTYNVWFREDLEMRNRMRALGQLIQRHSPDVICFQEVTPDIYNIFQITNWWKVYRCSV 240

Query: 267 KKDAHSRGYFCMLLSKLPVKSFSCQPFSNSIMGRELCVANLEVQNGLSLTVATSHLESPC 326
           KKDAHSRGYFCMLLSKLPVKSFSCQPFSNSIMGRELC+ANLEVQNGLSLTVATSHLESPC
Sbjct: 241 KKDAHSRGYFCMLLSKLPVKSFSCQPFSNSIMGRELCIANLEVQNGLSLTVATSHLESPC 300

Query: 327 PAPPKWNQMYSKERVIQAKEAIDFLKENPNVVFGGDMNWDDKSDGQFPFPDDWIDAWEEL 386
           PAPPKWNQMYSKERVIQAKEAI+FLKENPNVVFGGDMNWDDK DGQFPFPDDWIDAWEEL
Sbjct: 301 PAPPKWNQMYSKERVIQAKEAINFLKENPNVVFGGDMNWDDKLDGQFPFPDDWIDAWEEL 360

Query: 387 RPGENGWTYDTKSNKMLSGNRTLQRRLDRFVCKLQDFKVSSIVMIGTDPIPELTYTKEKK 442
            PGENGWTYDTKSNKMLSGNRTLQRRLDRFVCKLQDFKVSSIVMIGTDPIPELTYTKEKK
Sbjct: 361 HPGENGWTYDTKSNKMLSGNRTLQRRLDRFVCKLQDFKVSSIVMIGTDPIPELTYTKEKK 420

[Close]

BLAST of Cp4.1LG09g09120.1 vs. ExPASy TrEMBL
Match: A0A6J1CF88 (tyrosyl-DNA phosphodiesterase 2 OS=Momordica charantia OX=3673 GN=LOC111010713 PE=4 SV=1)

HSP 1 Score: 702 bits (1813), Expect = 2.39e-252
Identity = 355/447 (79.42%), Postives = 379/447 (84.79%), Query Frame = 0


Query: 28  FQSIAHSLSFSSARFLHRSVINRRTICSLSVSMSSWSCKKCTFLNPPSQKAACKICLSPS 87
           FQ+   SL FS  RFLH  V N +T  SLSV MS+WSCKKCTF+N PSQK ACKICLSPS
Sbjct: 4   FQTRPDSLIFSFGRFLHCPVTNFQTFRSLSVPMSTWSCKKCTFINSPSQKTACKICLSPS 63

Query: 88  SPPPSP-SSSSAPQWSCKACTFLNPYKNSDCELCGTRAPSLSLSSFKDLIDVSEDADADS 147
           SPPP P SSSSAP+WSCKACTFLNPY +SDCELCGTRAP+LSLSSFKDLI++SEDADA S
Sbjct: 64  SPPPPPPSSSSAPKWSCKACTFLNPYNSSDCELCGTRAPALSLSSFKDLIEISEDADAGS 123

Query: 148 SVGSVFFPLQPCKKRKLDDPVPVVGGDNFAELGAFRGIKASTNTIAEMGDSSSRTSLTPI 207
           SVGSVFFPLQPCKKRKLDDPVPVVG D+FAELGAFR IKAS  T+AEMGDSS+RTSLT I
Sbjct: 124 SVGSVFFPLQPCKKRKLDDPVPVVGHDDFAELGAFRDIKASGKTVAEMGDSSTRTSLTSI 183

Query: 208 KILTYN-------------------------------EVTPDIYNIFQITNWWKVYRCSV 267
           KIL+YN                               EVTP IYN FQI NWWKVYRCSV
Sbjct: 184 KILSYNVWFREDLEMHNRMRALGQLIQRHSPDVVCFQEVTPAIYNFFQIFNWWKVYRCSV 243

Query: 268 KKDAHSRGYFCMLLSKLPVKSFSCQPFSNSIMGRELCVANLEVQNGLSLTVATSHLESPC 327
            KDAHSRGYFC+LLSKLPVKSFS +PF NSIMGRELC+ANLE+QNG+SLTVATSHLESPC
Sbjct: 244 SKDAHSRGYFCLLLSKLPVKSFSVKPFFNSIMGRELCIANLELQNGISLTVATSHLESPC 303

Query: 328 PAPPKWNQMYSKERVIQAKEAIDFLKENPNVVFGGDMNWDDKSDGQFPFPDDWIDAWEEL 387
           PAPPKWNQMYSKERVIQAKEAID LKE+PNV+FGGDMNWDDK DG+FPFPD WIDAWEEL
Sbjct: 304 PAPPKWNQMYSKERVIQAKEAIDSLKESPNVIFGGDMNWDDKLDGRFPFPDGWIDAWEEL 363

Query: 388 RPGENGWTYDTKSNKMLSGNRTLQRRLDRFVCKLQDFKVSSIVMIGTDPIPELTYTKEKK 442
           RPGENGWTYDTKSNKMLSGNRTLQ+RLDRFVCKLQD+K SSI MIGTDPIP L+YTKEKK
Sbjct: 364 RPGENGWTYDTKSNKMLSGNRTLQKRLDRFVCKLQDYKASSIEMIGTDPIPGLSYTKEKK 423

[Close]

BLAST of Cp4.1LG09g09120.1 vs. ExPASy TrEMBL
Match: E5GC61 (Endonuclease/exonuclease/phosphatase family protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 694 bits (1790), Expect = 2.37e-248
Identity = 355/466 (76.18%), Postives = 385/466 (82.62%), Query Frame = 0


Query: 20  QKSSKSLMFQSIAHSLSFSSAR---------FLH-RSVINRRTICSLSVSMSSWSCKKCT 79
           QKSS+S MF +I  S S SS+          FLH R+V NR T  S S+SMSSWSCKKCT
Sbjct: 16  QKSSESSMFPTIESSSSSSSSSLRSLNSIGFFLHHRTVENRPTFLSFSLSMSSWSCKKCT 75

Query: 80  FLNPPSQKAACKICLSPSSPPPSPSSSSA--PQWSCKACTFLNPYKNSDCELCGTRAPSL 139
           FLNP SQKAACKICLSPSSPPPS SSSS+  P+WSCKACTFLN + NS+CELCGTRAP+L
Sbjct: 76  FLNPSSQKAACKICLSPSSPPPSSSSSSSTTPKWSCKACTFLNSFTNSECELCGTRAPAL 135

Query: 140 SLSSFKDLIDVSEDADADSSVGSVFFPLQPCKKRKLDDPVPVVGGDNFAELGAFRGIKAS 199
           SLSSFKDLIDVSEDA+ADSSVGSVFFPLQPCKKRK+DDPVP+    +FAEL AF+G KAS
Sbjct: 136 SLSSFKDLIDVSEDANADSSVGSVFFPLQPCKKRKMDDPVPLESHGDFAELSAFQGTKAS 195

Query: 200 TNTIAEMGDSSSRTSLTPIKILTYN-------------------------------EVTP 259
            N +AEMG SSSR +L P+KI+TYN                               EVTP
Sbjct: 196 MNAVAEMGGSSSRANLKPVKIMTYNVWFREDLELRNRMRALGQLIQRHSPDVICFQEVTP 255

Query: 260 DIYNIFQITNWWKVYRCSVKKDAHSRGYFCMLLSKLPVKSFSCQPFSNSIMGRELCVANL 319
            IY+IFQITNWWKVYRCSV KD+HSRGYFCMLLSKLPVKSFSCQPF NSIMGRELC+ NL
Sbjct: 256 AIYDIFQITNWWKVYRCSVIKDSHSRGYFCMLLSKLPVKSFSCQPFPNSIMGRELCIGNL 315

Query: 320 EVQNGLSLTVATSHLESPCPAPPKWNQMYSKERVIQAKEAIDFLKENPNVVFGGDMNWDD 379
           EVQNG+SLTVATSHLESPCPAPPKWNQMYSKERV+QAK+A+DFLKE PNV+FGGDMNWDD
Sbjct: 316 EVQNGISLTVATSHLESPCPAPPKWNQMYSKERVVQAKQAVDFLKETPNVIFGGDMNWDD 375

Query: 380 KSDGQFPFPDDWIDAWEELRPGENGWTYDTKSNKMLSGNRTLQRRLDRFVCKLQDFKVSS 439
           K DGQFPFPD WIDAWEELRPGENGWTYDTKSNKMLSGNRTLQ+RLDRF+CKLQDFKV+S
Sbjct: 376 KLDGQFPFPDGWIDAWEELRPGENGWTYDTKSNKMLSGNRTLQKRLDRFICKLQDFKVNS 435

Query: 440 IVMIGTDPIPELTYTKEKKVGKEMKMLELPVLPSDHYGLLLTISSL 442
           I MIGTD IP LTYTKEKKVGKEMK LELPVLPSDHYGLLLTISSL
Sbjct: 436 IEMIGTDSIPGLTYTKEKKVGKEMKTLELPVLPSDHYGLLLTISSL 481

[Close]

BLAST of Cp4.1LG09g09120.1 vs. ExPASy TrEMBL
Match: A0A1S3B294 (tyrosyl-DNA phosphodiesterase 2 OS=Cucumis melo OX=3656 GN=LOC103485200 PE=4 SV=1)

HSP 1 Score: 694 bits (1790), Expect = 2.37e-248
Identity = 355/466 (76.18%), Postives = 385/466 (82.62%), Query Frame = 0


Query: 20  QKSSKSLMFQSIAHSLSFSSAR---------FLH-RSVINRRTICSLSVSMSSWSCKKCT 79
           QKSS+S MF +I  S S SS+          FLH R+V NR T  S S+SMSSWSCKKCT
Sbjct: 16  QKSSESSMFPTIESSSSSSSSSLRSLNSIGFFLHHRTVENRPTFLSFSLSMSSWSCKKCT 75

Query: 80  FLNPPSQKAACKICLSPSSPPPSPSSSSA--PQWSCKACTFLNPYKNSDCELCGTRAPSL 139
           FLNP SQKAACKICLSPSSPPPS SSSS+  P+WSCKACTFLN + NS+CELCGTRAP+L
Sbjct: 76  FLNPSSQKAACKICLSPSSPPPSSSSSSSTTPKWSCKACTFLNSFTNSECELCGTRAPAL 135

Query: 140 SLSSFKDLIDVSEDADADSSVGSVFFPLQPCKKRKLDDPVPVVGGDNFAELGAFRGIKAS 199
           SLSSFKDLIDVSEDA+ADSSVGSVFFPLQPCKKRK+DDPVP+    +FAEL AF+G KAS
Sbjct: 136 SLSSFKDLIDVSEDANADSSVGSVFFPLQPCKKRKMDDPVPLESHGDFAELSAFQGTKAS 195

Query: 200 TNTIAEMGDSSSRTSLTPIKILTYN-------------------------------EVTP 259
            N +AEMG SSSR +L P+KI+TYN                               EVTP
Sbjct: 196 MNAVAEMGGSSSRANLKPVKIMTYNVWFREDLELRNRMRALGQLIQRHSPDVICFQEVTP 255

Query: 260 DIYNIFQITNWWKVYRCSVKKDAHSRGYFCMLLSKLPVKSFSCQPFSNSIMGRELCVANL 319
            IY+IFQITNWWKVYRCSV KD+HSRGYFCMLLSKLPVKSFSCQPF NSIMGRELC+ NL
Sbjct: 256 AIYDIFQITNWWKVYRCSVIKDSHSRGYFCMLLSKLPVKSFSCQPFPNSIMGRELCIGNL 315

Query: 320 EVQNGLSLTVATSHLESPCPAPPKWNQMYSKERVIQAKEAIDFLKENPNVVFGGDMNWDD 379
           EVQNG+SLTVATSHLESPCPAPPKWNQMYSKERV+QAK+A+DFLKE PNV+FGGDMNWDD
Sbjct: 316 EVQNGISLTVATSHLESPCPAPPKWNQMYSKERVVQAKQAVDFLKETPNVIFGGDMNWDD 375

Query: 380 KSDGQFPFPDDWIDAWEELRPGENGWTYDTKSNKMLSGNRTLQRRLDRFVCKLQDFKVSS 439
           K DGQFPFPD WIDAWEELRPGENGWTYDTKSNKMLSGNRTLQ+RLDRF+CKLQDFKV+S
Sbjct: 376 KLDGQFPFPDGWIDAWEELRPGENGWTYDTKSNKMLSGNRTLQKRLDRFICKLQDFKVNS 435

Query: 440 IVMIGTDPIPELTYTKEKKVGKEMKMLELPVLPSDHYGLLLTISSL 442
           I MIGTD IP LTYTKEKKVGKEMK LELPVLPSDHYGLLLTISSL
Sbjct: 436 IEMIGTDSIPGLTYTKEKKVGKEMKTLELPVLPSDHYGLLLTISSL 481

[Close]

BLAST of Cp4.1LG09g09120.1 vs. TAIR 10
Match: AT1G11800.1 (endonuclease/exonuclease/phosphatase family protein )

HSP 1 Score: 441.4 bits (1134), Expect = 8.4e-124
Identity = 240/433 (55.43%), Postives = 292/433 (67.44%), Query Frame = 0


Query: 51  RTICSLSVSMSSWSCKKCTFLNPPSQKAACKICLSP------SSPPPSPSSSS--APQWS 110
           R + S ++S SSWSC KCTFLN  SQK  C ICL+P      S PPPS S S+    +W+
Sbjct: 9   RIVTSRAMS-SSWSCNKCTFLNSASQKLNCMICLAPVSLPSLSPPPPSLSISANDEAKWA 68

Query: 111 CKACTFLNPYKNSDCELCGTRAPSLSLSSFKDLIDVS-EDADADSSVGSVFFPLQPCKKR 170
           CKACTFLN YKNS C++CGTR+P+ SL  F+DL D   E  DADSSVGSVFFPL+ C KR
Sbjct: 69  CKACTFLNTYKNSICDVCGTRSPTSSLLGFQDLTDSGLESNDADSSVGSVFFPLRRCIKR 128

Query: 171 K-LDDPVPVVGGDNFAELGAFRGIKASTNTIAEMG-DSSSRTSLTPIKILTYN------- 230
           K +DD V  V G +       +G+      I   G  S S T LT +KIL+YN       
Sbjct: 129 KAMDDDVVEVDGASVV-CSESQGVMKKNKEIETKGVASDSGTPLTCLKILSYNVWFREDL 188

Query: 231 ------------------------EVTPDIYNIFQITNWWKVYRCSVKKD-AHSRGYFCM 290
                                   EVTP+IY+IF+ +NWWK Y CSV  D A SRGY+CM
Sbjct: 189 ELNLRMRAIGHLIQLHSPHLICFQEVTPEIYDIFRKSNWWKAYSCSVSVDVAVSRGYYCM 248

Query: 291 LLSKLPVKSFSCQPFSNSIMGRELCVANLEVQNGLSLTVATSHLESPCPAPPKWNQMYSK 350
           LLSKL VKSFS + F NSIMGREL +A +EV     L  ATSHLESPCP PPKW+QM+S+
Sbjct: 249 LLSKLGVKSFSSKSFGNSIMGRELSIAEVEVPGRKPLVFATSHLESPCPGPPKWDQMFSR 308

Query: 351 ERVIQAKEAIDFLKENPNVVFGGDMNWDDKSDGQFPFPDDWIDAWEELRPGENGWTYDTK 410
           ERV QAKEAI+ L+ N NV+FGGDMNW DK DG+FP PD W+D WE L+PG+ G+TYDTK
Sbjct: 309 ERVEQAKEAIEILRPNANVIFGGDMNWCDKLDGKFPLPDKWVDVWEVLKPGDLGFTYDTK 368

Query: 411 SNKMLSGNRTLQRRLDRFVCKLQDFKVSSIVMIGTDPIPELTYTKEKKVGKEMKMLELPV 441
           +N MLSGNR LQ+RLDR +C+L D+K+  I M+G + IP L+Y KEKKV  ++K LELPV
Sbjct: 369 ANPMLSGNRALQKRLDRILCRLDDYKLGGIEMVGKEAIPGLSYVKEKKVRGDIKKLELPV 428

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g09120.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9JLG8	5.0e-04	38.81	Calpain-15 OS=Mus musculus OX=10090 GN=Capn15 PE=1 SV=1	[more]

BLAST of Cp4.1LG09g09120.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023542187.1	0.0	93.45	uncharacterized protein LOC111802155 [Cucurbita pepo subsp. pepo]	[more]
XP_022954436.1	1.42e-308	91.68	uncharacterized protein LOC111456698 [Cucurbita moschata]	[more]
KAG6573182.1	2.87e-308	91.68	Tyrosyl-DNA phosphodiesterase 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022994193.1	1.22e-295	91.05	uncharacterized protein LOC111490005 [Cucurbita maxima]	[more]
KAG7012360.1	6.51e-277	89.73	Tyrosyl-DNA phosphodiesterase 2, partial [Cucurbita argyrosperma subsp. argyrosp...	[more]

BLAST of Cp4.1LG09g09120.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GQX2	6.89e-309	91.68	uncharacterized protein LOC111456698 OS=Cucurbita moschata OX=3662 GN=LOC1114566...	[more]
A0A6J1K4H6	5.90e-296	91.05	uncharacterized protein LOC111490005 OS=Cucurbita maxima OX=3661 GN=LOC111490005...	[more]
A0A6J1CF88	2.39e-252	79.42	tyrosyl-DNA phosphodiesterase 2 OS=Momordica charantia OX=3673 GN=LOC111010713 P...	[more]
E5GC61	2.37e-248	76.18	Endonuclease/exonuclease/phosphatase family protein OS=Cucumis melo subsp. melo ...	[more]
A0A1S3B294	2.37e-248	76.18	tyrosyl-DNA phosphodiesterase 2 OS=Cucumis melo OX=3656 GN=LOC103485200 PE=4 SV=...	[more]

BLAST of Cp4.1LG09g09120.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11800.1	8.4e-124	55.43	endonuclease/exonuclease/phosphatase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 61..86 e-value: 2.2E-4 score: 30.6 coord: 99..123 e-value: 1.5E-4 score: 31.1
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 101..120
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 97..126 score: 8.275694
None	No IPR available	GENE3D	2.30.30.380		coord: 92..141 e-value: 1.4E-6 score: 30.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR15822:SF17	ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN, EXPRESSED	coord: 210..441
None	No IPR available	PANTHER	PTHR15822:SF17	ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN, EXPRESSED	coord: 55..212
None	No IPR available	PANTHER	PTHR15822	TRAF AND TNF RECEPTOR-ASSOCIATED PROTEIN	coord: 210..441
None	No IPR available	PANTHER	PTHR15822	TRAF AND TNF RECEPTOR-ASSOCIATED PROTEIN	coord: 55..212
None	No IPR available	CDD	cd09080	TDP2	coord: 208..439 e-value: 1.80825E-66 score: 211.048
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10	Endonuclease/exonuclease/phosphatase	coord: 189..441 e-value: 4.2E-63 score: 215.4
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 213..439
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 97..123

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG09g09120	Cp4.1LG09g09120	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG09g09120.1:five_prime_utr:001	Cp4.1LG09g09120.1:five_prime_utr:001	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG09g09120.1:exon:001	Cp4.1LG09g09120.1:exon:001	exon
Cp4.1LG09g09120.1:exon:002	Cp4.1LG09g09120.1:exon:002	exon
Cp4.1LG09g09120.1:exon:003	Cp4.1LG09g09120.1:exon:003	exon
Cp4.1LG09g09120.1:exon:004	Cp4.1LG09g09120.1:exon:004	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG09g09120.1:cds:001	Cp4.1LG09g09120.1:cds:001	CDS
Cp4.1LG09g09120.1:cds:002	Cp4.1LG09g09120.1:cds:002	CDS
Cp4.1LG09g09120.1:cds:003	Cp4.1LG09g09120.1:cds:003	CDS
Cp4.1LG09g09120.1:cds:004	Cp4.1LG09g09120.1:cds:004	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG09g09120.1:three_prime_utr:001	Cp4.1LG09g09120.1:three_prime_utr:001	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG09g09120.1	Cp4.1LG09g09120.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006302	double-strand break repair
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016605	PML body
molecular_function	GO:0070260	5'-tyrosyl-DNA phosphodiesterase activity
molecular_function	GO:0005507	copper ion binding
molecular_function	GO:0004518	nuclease activity
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0003697	single-stranded DNA binding