Cp4.1LG09g08990.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG09g08990.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	tobamovirus multiplication protein 1-like
Location	Cp4.1LG09: 8197203 .. 8201797 (+)
Sequence length	1547
RNA-Seq Expression	Cp4.1LG09g08990.1
Synteny	Cp4.1LG09g08990.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGGCGTTAAATAAATCAGGCTTTGGAAATGGGACCAAATAAATGAAGGTGCGAGAGCCAGCGACAGAAAAGTCCCTCTTCTCCTTTGCGGCCTCTACTCGCCGGCGCAGCGGTGGCTGTCTCGCCGGCGTTCTCCTGATCGTCTCAATTCGTCGGATTTTCGGTTCTTTGACTCTACGGCGGAGAGAGGGGAAAGTGAGAAAGCTTCTTTACTATTTAGGGGGAAATGACGAGATTGCAGCTGAACTTGACGACGGCCATGGAGATGGGAGTTACGGCATCCAGCTGGTGGAATGACATCAACGAATCTACTTTCTGGCAGGATCGGATTTTTTACTCTCTCTGTGCTGTATATGCTCTAGTCTCCGCCGTTGCTCTGGTCTCTCTCTTGCTTCCCTACCTCACTTATCTAAAACTATCTGCTATGCTGTGTTCGAGAGCCTGTTATTTCTCTGTTTTAAATTGATGTGTTAGAGTGGTAATTGATCGCTAATTGGTAGGTTTGAGTGCGTTTTCTATTATAGAATTGGTTCTTTTACCTTCCGATGGGTGCCACTGGCTCTGGTTTGTTCAATGAAACTCTAGGAGAATGAAAAATTCATGTTACTTCAAGTATAGTTTGCGTTTTTCAATATTTGATTCCTTTAATTTTTGGGGTTTAAACGCTATCTCGAAGTTCGCAGACCTTTTATAAGCTTTCAATGGCAAAAATTCGTGTTCAAATCAGCAAGAAGGGGGAAGAAAAGTAGACCTGTAGAGTAGAGATTTAGATTTAGATTTTGGGTGTACAGCTCTTAATTTGTGTTTGTGCGTGCAGATTCAATTGATAAGGATCGAACTGAGAGTCCCTGAATATGGCTGGACAACACAGAAAGTTTTCCATCTCATGAACTTCATTGTGAATGGAGGTAATATAAGTAGACTGTTCGACTTTATTTTCAGTGGAGGCATTTGAAGTTTTGATTGATAGTTTCAATTCTTACTCTGTGATTCAGTTCGCGCAATTGTGTTTGGGATCCACATGCAAGTGTTTCTTTTGCAACCAAAGGTAAATATACTCGTGCAGTGTCTGAACCTTTGATGTCATTTGTGATAATTTACCTTTGAAATATCCAAAGCTTTAACATTATTTGGGATTGGTCTGGACTCGGATTTTCAGTTCTTATTTTTTCCACACTAAGGAAAATCTTGAAACTCAGCGGTTCTACGAGAAAAAAGACTGCATAGCTTACTCAAAATATTGCGGATAGTGAAAACTATAGGAGATTGCACATCGTTCTTGCAGTTTTTGTAGGTTATTTTGAACTTTTCCCTATTGTTTATGGCCTGTGCCTTCAGTTGTTCTTGAGACACTCGAGAGCTATTCTCAAATTAAGAGCTATTTTGTAAACAATTCGACGGGAAACAACTTTTAAAACAAAACAAAACAAAACTTAAACAATTTTTTAACACTATTTCCAAATGGCACCTGAGTTTCTTTCTTCTTATATGGTTTTTTCATAATATTATAAATTTGTCCCTAGTTTTATCTCCTCTGAAAATCTTAAAAAGGTGTCATGAAGATTAAAGCTTGTATACTGAGGTATGTCAACTAATTTTGAATCAGGTTCTGCTATCGTTATTATTGGAACTCCCTGGTCTACTTTTTTTCTCTACTTACACGCTCCTGGTCCTCTTCTGGGCAGAGATATACCACCAGGCAAGTGTTATTTAATGTTTTGCTATCTATTTTCTTTATCAATTTTTTTTTTCTTGCAATCAAGGCTGTCTTCTTTTTCTAGTGGCTGAAGTCATTGATATTGCAATCGCTTTGGGCACAATGAGTATTGCTAATTTTTTTGTTGATTGGGTCGTCATGAACAGGCTAGAAGTCTGCCAACGGATAAACTCAGAATAGTTTACATTTCAATCAACAGTGTGGTATATCTCATACAGGTATTTTTAACACCACTTACTCTTGGCTACCCTTGTTCAAAATTCAATCACTAGCCAACTAATAGTTTAAAATCCTTGACTGAATTCAGAATCTTATTTGGAAGGATGAGAGGGAATTCCTGGTATTGGTTGTGTCTTTGTGAAATTCAGCCTTGCTTATATGTATGAAGCAGAGAAATATGTTTCCTGCTACTGGACGGTTGTAATATAATACTTAAGCTGCTATCCATTTATAAATACTGATTTTTACCATCCTATCGTTGATATCCGTGACTTTCATCCCGCCTGTTCATATGTTATTTTGTTGTAAAGTAAATTGAGGTGATGCTATTGATTAGTAGGACTCTCTAAGATGGCCATCTTAGTTATATTCTCAAAGTGAAATTTTAATTCCCCTCTTGCGTCAATAGATCGTCTTCATCTACATATTCAATTAATTATCACAAGTTTTTTGGTGCATTATTGTTTCTAATGCGAGAAATTGGTCATGATTTATTGTTATTATTATTTTGTCATTGAGGTTCTGATTAACCAAATTCCTGAGGAGAGGTTTTGCTGAACCATGTTATTATATATGTTGAACTCAACTCAAAGTTAAATAGTAATCTGTGGACAGGTTTGCATTTGGATATACATCGGGGTGGATGACAACAGTGTGGTGGAATTGGTTGGAAAAATTTACATTGCAGGTTAGTCTTTGTACCCAGTGAGTCATTTCCAGCCTACAAGAGGCCAAGTTTTGCAGATTTGATCTTCATTTTCGCTTTGCGAAGAAGACAGTTTTATATTACTAATCAATTGTTTCCCTTTCTAACCACTGCTTCCTTATTTCATTGTCCCAGTGGTGTCTTTCATAGCTGCAATAGGCTTCTTGATATATGGTGGAAGGTGAGTATCTCCTTCATGTCTGGTGGATATATCATTCAATGCATCTAGATCTTATAATTTCTGATTACTTGTGCTGATTACTTATTTCGTATGAAACTTTTTAGATTATTTTTCATGCTCAGACGTTTTCCAATTGAATCTAAAGGGAGAAGGAAGAAACTTCATGAGGTATGCGTCCATTGTTTATTATTCTTCTATCATGTTGTGACCACAAACGCCCTTTTCCTCCTATTATATGGAAAGAGTTTTGTTATTTATCAAAATTTCTATCCTCCATATCTGCGTGCAATATTCTGATAACTGATAGTACGAATTTAATTTACACGAACAAATTATATGGTCAAACTCCATTATTTTTTCTGCGGAAATTTGTCGCTATGATACCATAGTTAAAAGAGGGCAGTAGGTTTAGAAGACTTATTTGGGTTCTGCAACATGTGTATGTTTATACATAATACCCAAGCTTATTCATTCCAATCTGTTCCTCCTATATTAAAATTTGACATGAATGAAGATAATAGAAAACGATTGATAAGTTAAGCTCCATCAATCGTCTAAAGTAGGATCCGTGATGTTATTTTTAGGCTTGTTAGATGTACTTTGTGGGTTTTCATGTATATTATGGATCCACGTAATCATGCTTACTGTGCTTTTTAATACTTTTTTGTTTTAAATAAATAATTGCAGGTTGGATCTGTGACCGCCATATGCTTTACCTGCTTCCTCATTCGATGCTTTGTGGTATAGTTCAATCCTTCTGCTGCTAGTAATGAAAGAACCGTCTTCTTTAGGGAATGCTAATTTTAATCATAGGGTGGCCAACATTATGAATGGGTTTCTGACAATACATGGGATTCACCTGATGTTCTTTTTCACTGTTGAGTGCAGGTTGCTCTATCTGCTTTCGACGCTGATGCATCACTCGACGTTTTAGATCACCCCCTCCTGAATTTCATCTACTATTTGGTACGTCACTTCACTTCGGGCATGTTCGTGAGTGGTTTTAGTGAAAATGATTTGTTTATAAAGTTATTTATTAAAAACAATTTTCACCCCAAACACGGTCTTCATAGATTTTGAATGATTAACAACATTGTTCAGGCTGACAAAAATGATTTAAATCATTTTCGATTCACTCTCAAACACGTCCTAAACTTGTTCATACAACTTAGTTCTGATTTTGTTAGATTCCTCTTATTTTTGTCTGATACAAACCATTTTGCTGAACTTACAGTTGGTCGAAATTCTGCCTTCAGCATTAGTTCTTTACATATTACGCAAGTTGCCTCCTAAGAGAATATCAGCTCAATACCACCCCATTCGCTAGTTAATATCCATGTTGCATGCAAAACACTTCCCCAACTTGGGGTTGGTTTTTAATTATCTTGGAATTGAGAATCCTTACTGGAAGAAACAAGGCATGAAATTTGGGTGTAATGTGGCATCTGCTGTTGCATGTGATGCCAGAATAACCAAGCTGTGTTTGCTGCTGGCTGACAGCAATCTGTAACTCTTCTCTTGGGGTTGTCTGATTCGAACAACCCATTCTATTTGGATCTAAATGTGCACAAATTTTATAGATTTCTGTAAGATTAGTGTTGTGTTTCGATCCGCTTTGTTGTTCTTGTCCTGTAATTTTGTTCTCTATTTGAACAGTGGTATGCTAGGTGTTCTTCTCTATGTCACGTATGGTTGACTAAAATAATTCAATTTTATTAAGCTTAGCAACTAAGATAGTCATTTTATTAAGCTAGGGATGAGAATTTTACTTC

mRNA sequence

CAGGCGTTAAATAAATCAGGCTTTGGAAATGGGACCAAATAAATGAAGGTGCGAGAGCCAGCGACAGAAAAGTCCCTCTTCTCCTTTGCGGCCTCTACTCGCCGGCGCAGCGGTGGCTGTCTCGCCGGCGTTCTCCTGATCGTCTCAATTCGTCGGATTTTCGGTTCTTTGACTCTACGGCGGAGAGAGGGGAAAGTGAGAAAGCTTCTTTACTATTTAGGGGGAAATGACGAGATTGCAGCTGAACTTGACGACGGCCATGGAGATGGGAGTTACGGCATCCAGCTGGTGGAATGACATCAACGAATCTACTTTCTGGCAGGATCGGATTTTTTACTCTCTCTGTGCTGTATATGCTCTAGTCTCCGCCGTTGCTCTGATTCAATTGATAAGGATCGAACTGAGAGTCCCTGAATATGGCTGGACAACACAGAAAGTTTTCCATCTCATGAACTTCATTGTGAATGGAGTTCGCGCAATTGTGTTTGGGATCCACATGCAAGTGTTTCTTTTGCAACCAAAGGTTCTGCTATCGTTATTATTGGAACTCCCTGGTCTACTTTTTTTCTCTACTTACACGCTCCTGGTCCTCTTCTGGGCAGAGATATACCACCAGGCAAGTGCTAGAAGTCTGCCAACGGATAAACTCAGAATAGTTTACATTTCAATCAACAGTGTGGTATATCTCATACAGGTTTGCATTTGGATATACATCGGGGTGGATGACAACAGTGTGGTGGAATTGGTTGGAAAAATTTACATTGCAGTGGTGTCTTTCATAGCTGCAATAGGCTTCTTGATATATGGTGGAAGATTATTTTTCATGCTCAGACGTTTTCCAATTGAATCTAAAGGGAGAAGGAAGAAACTTCATGAGGTTGGATCTGTGACCGCCATATGCTTTACCTGCTTCCTCATTCGATGCTTTGTGGTTGCTCTATCTGCTTTCGACGCTGATGCATCACTCGACGTTTTAGATCACCCCCTCCTGAATTTCATCTACTATTTGTTGGTCGAAATTCTGCCTTCAGCATTAGTTCTTTACATATTACGCAAGTTGCCTCCTAAGAGAATATCAGCTCAATACCACCCCATTCGCTAGTTAATATCCATGTTGCATGCAAAACACTTCCCCAACTTGGGGTTGGTTTTTAATTATCTTGGAATTGAGAATCCTTACTGGAAGAAACAAGGCATGAAATTTGGGTGTAATGTGGCATCTGCTGTTGCATGTGATGCCAGAATAACCAAGCTGTGTTTGCTGCTGGCTGACAGCAATCTGTAACTCTTCTCTTGGGGTTGTCTGATTCGAACAACCCATTCTATTTGGATCTAAATGTGCACAAATTTTATAGATTTCTGTAAGATTAGTGTTGTGTTTCGATCCGCTTTGTTGTTCTTGTCCTGTAATTTTGTTCTCTATTTGAACAGTGGTATGCTAGGTGTTCTTCTCTATGTCACGTATGGTTGACTAAAATAATTCAATTTTATTAAGCTTAGCAACTAAGATAGTCATTTTATTAAGCTAGGGATGAGAATTTTACTTC

Coding sequence (CDS)

ATGACGAGATTGCAGCTGAACTTGACGACGGCCATGGAGATGGGAGTTACGGCATCCAGCTGGTGGAATGACATCAACGAATCTACTTTCTGGCAGGATCGGATTTTTTACTCTCTCTGTGCTGTATATGCTCTAGTCTCCGCCGTTGCTCTGATTCAATTGATAAGGATCGAACTGAGAGTCCCTGAATATGGCTGGACAACACAGAAAGTTTTCCATCTCATGAACTTCATTGTGAATGGAGTTCGCGCAATTGTGTTTGGGATCCACATGCAAGTGTTTCTTTTGCAACCAAAGGTTCTGCTATCGTTATTATTGGAACTCCCTGGTCTACTTTTTTTCTCTACTTACACGCTCCTGGTCCTCTTCTGGGCAGAGATATACCACCAGGCAAGTGCTAGAAGTCTGCCAACGGATAAACTCAGAATAGTTTACATTTCAATCAACAGTGTGGTATATCTCATACAGGTTTGCATTTGGATATACATCGGGGTGGATGACAACAGTGTGGTGGAATTGGTTGGAAAAATTTACATTGCAGTGGTGTCTTTCATAGCTGCAATAGGCTTCTTGATATATGGTGGAAGATTATTTTTCATGCTCAGACGTTTTCCAATTGAATCTAAAGGGAGAAGGAAGAAACTTCATGAGGTTGGATCTGTGACCGCCATATGCTTTACCTGCTTCCTCATTCGATGCTTTGTGGTTGCTCTATCTGCTTTCGACGCTGATGCATCACTCGACGTTTTAGATCACCCCCTCCTGAATTTCATCTACTATTTGTTGGTCGAAATTCTGCCTTCAGCATTAGTTCTTTACATATTACGCAAGTTGCCTCCTAAGAGAATATCAGCTCAATACCACCCCATTCGCTAG

Protein sequence

MTRLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELRVPEYGWTTQKVFHLMNFIVNGVRAIVFGIHMQVFLLQPKVLLSLLLELPGLLFFSTYTLLVLFWAEIYHQASARSLPTDKLRIVYISINSVVYLIQVCIWIYIGVDDNSVVELVGKIYIAVVSFIAAIGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFDADASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR

Homology

[Close]

BLAST of Cp4.1LG09g08990.1 vs. ExPASy Swiss-Prot
Match: Q402F4 (Tobamovirus multiplication protein 1 OS=Nicotiana tabacum OX=4097 GN=TOM1 PE=1 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 6.4e-125
Identity = 232/290 (80.00%), Postives = 255/290 (87.93%), Query Frame = 0


Query: 1   MTRLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELR 60
           MTRL L  ++++++    ++WW+ INES  WQD IFYSLCA YALVSAVALIQLIRIELR
Sbjct: 1   MTRLPLG-SSSIDIAGPTTNWWDQINESVQWQDGIFYSLCASYALVSAVALIQLIRIELR 60

Query: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGIHMQVFLLQPKVLLSLLLELPGLLFFSTYTLL 120
           VPEYGWTTQKVFHLMNF+VNGVRAIVFG H QVFL  PKVL   +L+LPGLLFFST+TLL
Sbjct: 61  VPEYGWTTQKVFHLMNFVVNGVRAIVFGFHKQVFLFHPKVLSLAILDLPGLLFFSTFTLL 120

Query: 121 VLFWAEIYHQASARSLPTDKLRIVYISINSVVYLIQVCIWIYIGVDDNSVVELVGKIYIA 180
           VLFWAEIYHQ  ARSLPTDKLRI YISIN  +Y IQ CIW+Y+  +DNS VE +GKI+IA
Sbjct: 121 VLFWAEIYHQ--ARSLPTDKLRISYISINGAIYFIQACIWVYLWSNDNSTVEFIGKIFIA 180

Query: 181 VVSFIAAIGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSA 240
           VVSFIAA+GFL+YGGRLF MLRRFPIESKGRRKKLHEVGSVTAICFTCFLI CFVV LSA
Sbjct: 181 VVSFIAALGFLLYGGRLFLMLRRFPIESKGRRKKLHEVGSVTAICFTCFLISCFVVVLSA 240

Query: 241 FDADASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPI 291
           FD DASLDVLDHP+LN IYYLLVEILPSALVLYILRKLPPKR+SAQYHPI
Sbjct: 241 FDPDASLDVLDHPVLNLIYYLLVEILPSALVLYILRKLPPKRVSAQYHPI 287

[Close]

BLAST of Cp4.1LG09g08990.1 vs. ExPASy Swiss-Prot
Match: Q9FEG2 (Tobamovirus multiplication protein 1 OS=Arabidopsis thaliana OX=3702 GN=TOM1 PE=1 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 5.0e-122
Identity = 224/284 (78.87%), Postives = 253/284 (89.08%), Query Frame = 0


Query: 8   LTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELRVPEYGWT 67
           LTTA+      +SWW+D+NEST WQD IF++LC  YALVSAVAL+QLIRI++RVPEYGWT
Sbjct: 16  LTTAI------TSWWDDVNESTQWQDGIFFALCGAYALVSAVALVQLIRIQMRVPEYGWT 75

Query: 68  TQKVFHLMNFIVNGVRAIVFGIHMQVFLLQPKVLLSLLLELPGLLFFSTYTLLVLFWAEI 127
           TQKVFHLMNF+VNGVRA++FG HMQVFL+ PK L  +LL+LPGLLFFS YTLLVLFWAEI
Sbjct: 76  TQKVFHLMNFVVNGVRAVLFGFHMQVFLVHPKALCWVLLDLPGLLFFSAYTLLVLFWAEI 135

Query: 128 YHQASARSLPTDKLRIVYISINSVVYLIQVCIWIYIGVDDNSVVELVGKIYIAVVSFIAA 187
           YHQ  ARSLPTDKLRI YIS+N  VYL Q+ IW YI V DNS VELVGKI+IAVVSFIAA
Sbjct: 136 YHQ--ARSLPTDKLRITYISVNVAVYLAQIGIWAYIWVHDNSTVELVGKIFIAVVSFIAA 195

Query: 188 IGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFDADASL 247
           +GFL+YGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRC VVA+SAFD D +L
Sbjct: 196 LGFLLYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCVVVAVSAFDKDLTL 255

Query: 248 DVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR 292
           DVLDHP+LN IYY++VE+LPSALVL+ILRKLPPKR+SAQYHPI+
Sbjct: 256 DVLDHPVLNLIYYMVVEVLPSALVLFILRKLPPKRVSAQYHPIQ 291

[Close]

BLAST of Cp4.1LG09g08990.1 vs. ExPASy Swiss-Prot
Match: Q9ZUM2 (Tobamovirus multiplication protein 3 OS=Arabidopsis thaliana OX=3702 GN=TOM3 PE=1 SV=2)

HSP 1 Score: 347.1 bits (889), Expect = 2.0e-94
Identity = 173/274 (63.14%), Postives = 220/274 (80.29%), Query Frame = 0


Query: 18  ASSWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELRVPEYGWTTQKVFHLMNF 77
           AS+WW+D+NES  WQDRIF+ L  +Y +VS VA+IQL+RI+LRVPEYGWTTQKVFH +NF
Sbjct: 32  ASNWWSDVNESPIWQDRIFHVLAVLYGIVSLVAVIQLVRIQLRVPEYGWTTQKVFHFLNF 91

Query: 78  IVNGVRAIVFGIHMQVFLLQPKVLLSLLLELPGLLFFSTYTLLVLFWAEIYHQASARSLP 137
           +VNGVRA+VF     V  +QP++L  +LL++P L FF+TY LLVLFWAEIY+Q  AR++ 
Sbjct: 92  VVNGVRAVVFVFRRNVQFMQPEILQHILLDIPSLAFFTTYALLVLFWAEIYYQ--ARAVS 151

Query: 138 TDKLRIVYISINSVVYLIQVCIWIYIGVDDNSVVELVGKIYIAVVSFIAAIGFLIYGGRL 197
           TD LR  + +IN+VVY++Q+ +W+ +      V+ ++ K++ A VS  AA+GFL+YGGRL
Sbjct: 152 TDGLRPSFFTINAVVYVVQIALWLVLWWKPVRVMVILSKMFFAGVSLFAALGFLLYGGRL 211

Query: 198 FFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFDADASLDVLDHPLLNF 257
           F ML+RFP+ESKGRRKKL EVG VT ICFTCFLIRC ++  +AFD  A+LDVLDHP+LNF
Sbjct: 212 FLMLQRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFAAFDEGANLDVLDHPILNF 271

Query: 258 IYYLLVEILPSALVLYILRKLPPKRISAQYHPIR 292
           IYYLLVEILPS+LVL+ILRKLPPKR   QYH IR
Sbjct: 272 IYYLLVEILPSSLVLFILRKLPPKRGITQYHQIR 303

[Close]

BLAST of Cp4.1LG09g08990.1 vs. ExPASy Swiss-Prot
Match: Q402F3 (Tobamovirus multiplication protein 3 OS=Nicotiana tabacum OX=4097 GN=TOM3 PE=1 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 7.9e-91
Identity = 169/274 (61.68%), Postives = 215/274 (78.47%), Query Frame = 0


Query: 18  ASSWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELRVPEYGWTTQKVFHLMNF 77
           A SWW ++N S  WQDR+F+ L  +Y +VSAVAL+QLIRI++RVPEYGWTTQKVFH +NF
Sbjct: 23  AISWWEEVNRSRAWQDRLFHVLAILYGIVSAVALVQLIRIQMRVPEYGWTTQKVFHFLNF 82

Query: 78  IVNGVRAIVFGIHMQVFLLQPKVLLSLLLELPGLLFFSTYTLLVLFWAEIYHQASARSLP 137
           +VNGVR++VF     V  L P+++  +LL++P L FF+TY LLVLFWAEIY+Q  AR++ 
Sbjct: 83  LVNGVRSLVFAFRRDVQKLHPEIVQHILLDMPSLAFFTTYALLVLFWAEIYYQ--ARAVS 142

Query: 138 TDKLRIVYISINSVVYLIQVCIWIYIGVDDNSVVELVGKIYIAVVSFIAAIGFLIYGGRL 197
           TD LR  + +IN VVY+IQ+ +W+ I      V+ ++ K++ A VS  AA+GFL+YGGRL
Sbjct: 143 TDGLRPSFFTINGVVYVIQIILWLIIWWKPVRVLVILSKMFFAGVSLFAALGFLLYGGRL 202

Query: 198 FFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFDADASLDVLDHPLLNF 257
           F ML+RFP+ESKGRRKKL EVG VT ICF+CFLIRC ++  +AF+  A LDVLDHP+LN 
Sbjct: 203 FLMLQRFPVESKGRRKKLQEVGYVTTICFSCFLIRCVMMCFNAFNKAADLDVLDHPILNL 262

Query: 258 IYYLLVEILPSALVLYILRKLPPKRISAQYHPIR 292
           IYYLLVEILPS+LVL+ILRKLPPKR   QYHPIR
Sbjct: 263 IYYLLVEILPSSLVLFILRKLPPKRGITQYHPIR 294

[Close]

BLAST of Cp4.1LG09g08990.1 vs. ExPASy Swiss-Prot
Match: Q948R8 (Protein TOM THREE HOMOLOG 1 OS=Arabidopsis thaliana OX=3702 GN=THH1 PE=2 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 1.3e-90
Identity = 168/272 (61.76%), Postives = 214/272 (78.68%), Query Frame = 0


Query: 20  SWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELRVPEYGWTTQKVFHLMNFIV 79
           +WW D+NES  WQDRIF+ L  +Y +VS +A+IQL+RI+LRVPEYGWTTQKVFH +NF+V
Sbjct: 24  NWWWDVNESPVWQDRIFHVLAVLYGIVSVIAVIQLVRIQLRVPEYGWTTQKVFHFLNFMV 83

Query: 80  NGVRAIVFGIHMQVFLLQPKVLLSLLLELPGLLFFSTYTLLVLFWAEIYHQASARSLPTD 139
           NGVRA+VF        +QP++L  +LL++P L FF+TY LLVLFWAEIY+Q  AR++ TD
Sbjct: 84  NGVRALVFLFRRDAQNMQPEILQHILLDIPSLAFFTTYALLVLFWAEIYYQ--ARAVSTD 143

Query: 140 KLRIVYISINSVVYLIQVCIWIYIGVDDNSVVELVGKIYIAVVSFIAAIGFLIYGGRLFF 199
            LR  + +IN+VVY+IQ+ +W+ +      ++ ++ K++ A VS  AA+GFL+YGGRLF 
Sbjct: 144 GLRPSFFTINAVVYVIQIALWLVLWWKPVHLMVIISKMFFAGVSLFAALGFLLYGGRLFL 203

Query: 200 MLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFDADASLDVLDHPLLNFIY 259
           ML+RFP+ESKGRRKKL EVG VT ICFTCFLIRC ++   AFD  A LDVLDHP+LNFIY
Sbjct: 204 MLQRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFDAFDDAADLDVLDHPILNFIY 263

Query: 260 YLLVEILPSALVLYILRKLPPKRISAQYHPIR 292
           YLLVEILPS+LVL+ILRKLPPKR   QYH I+
Sbjct: 264 YLLVEILPSSLVLFILRKLPPKRGITQYHQIQ 293

[Close]

BLAST of Cp4.1LG09g08990.1 vs. NCBI nr
Match: KAG7012372.1 (Tobamovirus multiplication protein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 553 bits (1424), Expect = 6.06e-198
Identity = 289/291 (99.31%), Postives = 290/291 (99.66%), Query Frame = 0


Query: 1   MTRLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELR 60
           MTRLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELR
Sbjct: 1   MTRLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELR 60

Query: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGIHMQVFLLQPKVLLSLLLELPGLLFFSTYTLL 120
           VPEYGWTTQKVFHLMNFIVNGVRAIVFG+HMQVFLLQPKVLLSLLLELPGLLFFSTYTLL
Sbjct: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGLHMQVFLLQPKVLLSLLLELPGLLFFSTYTLL 120

Query: 121 VLFWAEIYHQASARSLPTDKLRIVYISINSVVYLIQVCIWIYIGVDDNSVVELVGKIYIA 180
           VLFWAEIYHQASARSLPTDKLRIVYISINSVVYLIQVCIWIYIGVDDNS VELVGKIYIA
Sbjct: 121 VLFWAEIYHQASARSLPTDKLRIVYISINSVVYLIQVCIWIYIGVDDNSAVELVGKIYIA 180

Query: 181 VVSFIAAIGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSA 240
           VVSFIAAIGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSA
Sbjct: 181 VVSFIAAIGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSA 240

Query: 241 FDADASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR 291
           FDADASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR
Sbjct: 241 FDADASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR 291

[Close]

BLAST of Cp4.1LG09g08990.1 vs. NCBI nr
Match: XP_023542730.1 (tobamovirus multiplication protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 547 bits (1409), Expect = 1.09e-195
Identity = 289/291 (99.31%), Postives = 289/291 (99.31%), Query Frame = 0


Query: 1   MTRLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELR 60
           MTRLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELR
Sbjct: 1   MTRLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELR 60

Query: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGIHMQVFLLQPKVLLSLLLELPGLLFFSTYTLL 120
           VPEYGWTTQKVFHLMNFIVNGVRAIVFGIHMQVFLLQPKVLLSLLLELPGLLFFSTYTLL
Sbjct: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGIHMQVFLLQPKVLLSLLLELPGLLFFSTYTLL 120

Query: 121 VLFWAEIYHQASARSLPTDKLRIVYISINSVVYLIQVCIWIYIGVDDNSVVELVGKIYIA 180
           VLFWAEIYHQA  RSLPTDKLRIVYISINSVVYLIQVCIWIYIGVDDNSVVELVGKIYIA
Sbjct: 121 VLFWAEIYHQA--RSLPTDKLRIVYISINSVVYLIQVCIWIYIGVDDNSVVELVGKIYIA 180

Query: 181 VVSFIAAIGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSA 240
           VVSFIAAIGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSA
Sbjct: 181 VVSFIAAIGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSA 240

Query: 241 FDADASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR 291
           FDADASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR
Sbjct: 241 FDADASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR 289

[Close]

BLAST of Cp4.1LG09g08990.1 vs. NCBI nr
Match: XP_022954819.1 (tobamovirus multiplication protein 1-like [Cucurbita moschata])

HSP 1 Score: 546 bits (1406), Expect = 3.12e-195
Identity = 287/291 (98.63%), Postives = 289/291 (99.31%), Query Frame = 0


Query: 1   MTRLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELR 60
           MTRLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELR
Sbjct: 1   MTRLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELR 60

Query: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGIHMQVFLLQPKVLLSLLLELPGLLFFSTYTLL 120
           VPEYGWTTQKVFHLMNFIVNGVRAIVFG+HMQVFLLQPKVLLSLLLELPGLLFFSTYTLL
Sbjct: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGLHMQVFLLQPKVLLSLLLELPGLLFFSTYTLL 120

Query: 121 VLFWAEIYHQASARSLPTDKLRIVYISINSVVYLIQVCIWIYIGVDDNSVVELVGKIYIA 180
           VLFWAEIYHQA  RSLPTDKLRIVYISINSVVYLIQVCIWIYIGVDDNSVVEL+GKIYIA
Sbjct: 121 VLFWAEIYHQA--RSLPTDKLRIVYISINSVVYLIQVCIWIYIGVDDNSVVELIGKIYIA 180

Query: 181 VVSFIAAIGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSA 240
           VVSFIAAIGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSA
Sbjct: 181 VVSFIAAIGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSA 240

Query: 241 FDADASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR 291
           FDADASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR
Sbjct: 241 FDADASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR 289

[Close]

BLAST of Cp4.1LG09g08990.1 vs. NCBI nr
Match: XP_022994300.1 (tobamovirus multiplication protein 1-like [Cucurbita maxima])

HSP 1 Score: 545 bits (1404), Expect = 6.30e-195
Identity = 287/291 (98.63%), Postives = 289/291 (99.31%), Query Frame = 0


Query: 1   MTRLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELR 60
           MTRLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYA+VSAVALIQLIRIELR
Sbjct: 1   MTRLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYAVVSAVALIQLIRIELR 60

Query: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGIHMQVFLLQPKVLLSLLLELPGLLFFSTYTLL 120
           VPEYGWTTQKVFHLMNFIVNGVRAIVFG+HMQVFLLQPKVLLSLLLELPGLLFFSTYTLL
Sbjct: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGLHMQVFLLQPKVLLSLLLELPGLLFFSTYTLL 120

Query: 121 VLFWAEIYHQASARSLPTDKLRIVYISINSVVYLIQVCIWIYIGVDDNSVVELVGKIYIA 180
           VLFWAEIYHQA  RSLPTDKLRIVYISINSVVYLIQVCIWIYIGVDDNSVVELVGKIYIA
Sbjct: 121 VLFWAEIYHQA--RSLPTDKLRIVYISINSVVYLIQVCIWIYIGVDDNSVVELVGKIYIA 180

Query: 181 VVSFIAAIGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSA 240
           VVSFIAAIGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSA
Sbjct: 181 VVSFIAAIGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSA 240

Query: 241 FDADASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR 291
           FDADASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR
Sbjct: 241 FDADASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR 289

[Close]

BLAST of Cp4.1LG09g08990.1 vs. NCBI nr
Match: KAG6573196.1 (Tobamovirus multiplication protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 545 bits (1403), Expect = 8.94e-195
Identity = 287/291 (98.63%), Postives = 288/291 (98.97%), Query Frame = 0


Query: 1   MTRLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELR 60
           MTRLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELR
Sbjct: 1   MTRLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELR 60

Query: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGIHMQVFLLQPKVLLSLLLELPGLLFFSTYTLL 120
           VPEYGWTTQKVFHLMNFIVNGVRAIVFG+HMQVFLLQPKVLLSLLLELPGLLFFSTYTLL
Sbjct: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGLHMQVFLLQPKVLLSLLLELPGLLFFSTYTLL 120

Query: 121 VLFWAEIYHQASARSLPTDKLRIVYISINSVVYLIQVCIWIYIGVDDNSVVELVGKIYIA 180
           VLFWAEIYHQA  RSLPTDKLRIVYISINSVVYLIQVCIWIYIGVDDNS VELVGKIYIA
Sbjct: 121 VLFWAEIYHQA--RSLPTDKLRIVYISINSVVYLIQVCIWIYIGVDDNSAVELVGKIYIA 180

Query: 181 VVSFIAAIGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSA 240
           VVSFIAAIGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSA
Sbjct: 181 VVSFIAAIGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSA 240

Query: 241 FDADASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR 291
           FDADASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR
Sbjct: 241 FDADASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR 289

[Close]

BLAST of Cp4.1LG09g08990.1 vs. ExPASy TrEMBL
Match: A0A6J1GU53 (tobamovirus multiplication protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111456965 PE=3 SV=1)

HSP 1 Score: 546 bits (1406), Expect = 1.51e-195
Identity = 287/291 (98.63%), Postives = 289/291 (99.31%), Query Frame = 0


Query: 1   MTRLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELR 60
           MTRLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELR
Sbjct: 1   MTRLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELR 60

Query: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGIHMQVFLLQPKVLLSLLLELPGLLFFSTYTLL 120
           VPEYGWTTQKVFHLMNFIVNGVRAIVFG+HMQVFLLQPKVLLSLLLELPGLLFFSTYTLL
Sbjct: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGLHMQVFLLQPKVLLSLLLELPGLLFFSTYTLL 120

Query: 121 VLFWAEIYHQASARSLPTDKLRIVYISINSVVYLIQVCIWIYIGVDDNSVVELVGKIYIA 180
           VLFWAEIYHQA  RSLPTDKLRIVYISINSVVYLIQVCIWIYIGVDDNSVVEL+GKIYIA
Sbjct: 121 VLFWAEIYHQA--RSLPTDKLRIVYISINSVVYLIQVCIWIYIGVDDNSVVELIGKIYIA 180

Query: 181 VVSFIAAIGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSA 240
           VVSFIAAIGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSA
Sbjct: 181 VVSFIAAIGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSA 240

Query: 241 FDADASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR 291
           FDADASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR
Sbjct: 241 FDADASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR 289

[Close]

BLAST of Cp4.1LG09g08990.1 vs. ExPASy TrEMBL
Match: A0A6J1K0T9 (tobamovirus multiplication protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111490067 PE=3 SV=1)

HSP 1 Score: 545 bits (1404), Expect = 3.05e-195
Identity = 287/291 (98.63%), Postives = 289/291 (99.31%), Query Frame = 0


Query: 1   MTRLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELR 60
           MTRLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYA+VSAVALIQLIRIELR
Sbjct: 1   MTRLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYAVVSAVALIQLIRIELR 60

Query: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGIHMQVFLLQPKVLLSLLLELPGLLFFSTYTLL 120
           VPEYGWTTQKVFHLMNFIVNGVRAIVFG+HMQVFLLQPKVLLSLLLELPGLLFFSTYTLL
Sbjct: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGLHMQVFLLQPKVLLSLLLELPGLLFFSTYTLL 120

Query: 121 VLFWAEIYHQASARSLPTDKLRIVYISINSVVYLIQVCIWIYIGVDDNSVVELVGKIYIA 180
           VLFWAEIYHQA  RSLPTDKLRIVYISINSVVYLIQVCIWIYIGVDDNSVVELVGKIYIA
Sbjct: 121 VLFWAEIYHQA--RSLPTDKLRIVYISINSVVYLIQVCIWIYIGVDDNSVVELVGKIYIA 180

Query: 181 VVSFIAAIGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSA 240
           VVSFIAAIGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSA
Sbjct: 181 VVSFIAAIGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSA 240

Query: 241 FDADASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR 291
           FDADASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR
Sbjct: 241 FDADASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR 289

[Close]

BLAST of Cp4.1LG09g08990.1 vs. ExPASy TrEMBL
Match: A0A0A0LU94 (DUF1084 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G063580 PE=3 SV=1)

HSP 1 Score: 531 bits (1369), Expect = 6.58e-190
Identity = 278/291 (95.53%), Postives = 284/291 (97.59%), Query Frame = 0


Query: 1   MTRLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELR 60
           MTRLQLNLTT MEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELR
Sbjct: 1   MTRLQLNLTTTMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELR 60

Query: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGIHMQVFLLQPKVLLSLLLELPGLLFFSTYTLL 120
           VPEYGWTTQKVFHLMNFIVNGVRAIVFG+H QVFLLQPKVLL LLLELPGLLFFSTYTLL
Sbjct: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGLHKQVFLLQPKVLLLLLLELPGLLFFSTYTLL 120

Query: 121 VLFWAEIYHQASARSLPTDKLRIVYISINSVVYLIQVCIWIYIGVDDNSVVELVGKIYIA 180
           VLFWAEIYHQA  RSLPTDKLR VYISINSV+YLIQVCIWIYIGV+DNSVVE +GKI+IA
Sbjct: 121 VLFWAEIYHQA--RSLPTDKLRTVYISINSVIYLIQVCIWIYIGVNDNSVVEFIGKIFIA 180

Query: 181 VVSFIAAIGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSA 240
           VVSFIAA+GFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSA
Sbjct: 181 VVSFIAALGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSA 240

Query: 241 FDADASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR 291
           FDADASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR
Sbjct: 241 FDADASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR 289

[Close]

BLAST of Cp4.1LG09g08990.1 vs. ExPASy TrEMBL
Match: A0A5A7UQF6 (Tobamovirus multiplication protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G00360 PE=3 SV=1)

HSP 1 Score: 529 bits (1363), Expect = 6.04e-189
Identity = 277/292 (94.86%), Postives = 284/292 (97.26%), Query Frame = 0


Query: 1   MTRLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELR 60
           M RLQLNLTT MEMGVTA+SWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELR
Sbjct: 1   MGRLQLNLTTTMEMGVTATSWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELR 60

Query: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGIHMQVFLLQPKVLLSLLLELPGLLFFSTYTLL 120
           VPEYGWTTQKVFHLMNFIVNGVRAIVFG+H QVFLLQPKV L LLLELPGLLFFSTYTLL
Sbjct: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGLHNQVFLLQPKVFLLLLLELPGLLFFSTYTLL 120

Query: 121 VLFWAEIYHQAS-ARSLPTDKLRIVYISINSVVYLIQVCIWIYIGVDDNSVVELVGKIYI 180
           VLFWAEIYHQAS ARSLPTDKLR VYISINSV+YLIQVCIWIYIGV+DNSVVE +GKI+I
Sbjct: 121 VLFWAEIYHQASFARSLPTDKLRTVYISINSVIYLIQVCIWIYIGVNDNSVVEFIGKIFI 180

Query: 181 AVVSFIAAIGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALS 240
           AVVSFIAA+GFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALS
Sbjct: 181 AVVSFIAALGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALS 240

Query: 241 AFDADASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR 291
           AFDADASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR
Sbjct: 241 AFDADASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR 292

[Close]

BLAST of Cp4.1LG09g08990.1 vs. ExPASy TrEMBL
Match: A0A5D3BHU2 (Tobamovirus multiplication protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005880 PE=3 SV=1)

HSP 1 Score: 526 bits (1354), Expect = 1.27e-187
Identity = 275/291 (94.50%), Postives = 282/291 (96.91%), Query Frame = 0


Query: 1   MTRLQLNLTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELR 60
           M RLQLNLTT MEMGVTA+SWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELR
Sbjct: 1   MGRLQLNLTTTMEMGVTATSWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELR 60

Query: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGIHMQVFLLQPKVLLSLLLELPGLLFFSTYTLL 120
           VPEYGWTTQKVFHLMNFIVNGVRAIVFG+H QVFLLQPKV L LLLELPGLLFFSTYTLL
Sbjct: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGLHNQVFLLQPKVFLLLLLELPGLLFFSTYTLL 120

Query: 121 VLFWAEIYHQASARSLPTDKLRIVYISINSVVYLIQVCIWIYIGVDDNSVVELVGKIYIA 180
           VLFWAEIYHQA  RSLPTDKLR VYISINSV+YLIQVCIWIYIGV+DNSVVE +GKI+IA
Sbjct: 121 VLFWAEIYHQA--RSLPTDKLRTVYISINSVIYLIQVCIWIYIGVNDNSVVEFIGKIFIA 180

Query: 181 VVSFIAAIGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSA 240
           VVSFIAA+GFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSA
Sbjct: 181 VVSFIAALGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSA 240

Query: 241 FDADASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR 291
           FDADASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR
Sbjct: 241 FDADASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR 289

[Close]

BLAST of Cp4.1LG09g08990.1 vs. TAIR 10
Match: AT4G21790.1 (tobamovirus multiplication 1 )

HSP 1 Score: 438.7 bits (1127), Expect = 3.6e-123
Identity = 224/284 (78.87%), Postives = 253/284 (89.08%), Query Frame = 0


Query: 8   LTTAMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELRVPEYGWT 67
           LTTA+      +SWW+D+NEST WQD IF++LC  YALVSAVAL+QLIRI++RVPEYGWT
Sbjct: 16  LTTAI------TSWWDDVNESTQWQDGIFFALCGAYALVSAVALVQLIRIQMRVPEYGWT 75

Query: 68  TQKVFHLMNFIVNGVRAIVFGIHMQVFLLQPKVLLSLLLELPGLLFFSTYTLLVLFWAEI 127
           TQKVFHLMNF+VNGVRA++FG HMQVFL+ PK L  +LL+LPGLLFFS YTLLVLFWAEI
Sbjct: 76  TQKVFHLMNFVVNGVRAVLFGFHMQVFLVHPKALCWVLLDLPGLLFFSAYTLLVLFWAEI 135

Query: 128 YHQASARSLPTDKLRIVYISINSVVYLIQVCIWIYIGVDDNSVVELVGKIYIAVVSFIAA 187
           YHQ  ARSLPTDKLRI YIS+N  VYL Q+ IW YI V DNS VELVGKI+IAVVSFIAA
Sbjct: 136 YHQ--ARSLPTDKLRITYISVNVAVYLAQIGIWAYIWVHDNSTVELVGKIFIAVVSFIAA 195

Query: 188 IGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFDADASL 247
           +GFL+YGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRC VVA+SAFD D +L
Sbjct: 196 LGFLLYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCVVVAVSAFDKDLTL 255

Query: 248 DVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR 292
           DVLDHP+LN IYY++VE+LPSALVL+ILRKLPPKR+SAQYHPI+
Sbjct: 256 DVLDHPVLNLIYYMVVEVLPSALVLFILRKLPPKRVSAQYHPIQ 291

[Close]

BLAST of Cp4.1LG09g08990.1 vs. TAIR 10
Match: AT2G02180.1 (tobamovirus multiplication protein 3 )

HSP 1 Score: 347.1 bits (889), Expect = 1.4e-95
Identity = 173/274 (63.14%), Postives = 220/274 (80.29%), Query Frame = 0


Query: 18  ASSWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELRVPEYGWTTQKVFHLMNF 77
           AS+WW+D+NES  WQDRIF+ L  +Y +VS VA+IQL+RI+LRVPEYGWTTQKVFH +NF
Sbjct: 32  ASNWWSDVNESPIWQDRIFHVLAVLYGIVSLVAVIQLVRIQLRVPEYGWTTQKVFHFLNF 91

Query: 78  IVNGVRAIVFGIHMQVFLLQPKVLLSLLLELPGLLFFSTYTLLVLFWAEIYHQASARSLP 137
           +VNGVRA+VF     V  +QP++L  +LL++P L FF+TY LLVLFWAEIY+Q  AR++ 
Sbjct: 92  VVNGVRAVVFVFRRNVQFMQPEILQHILLDIPSLAFFTTYALLVLFWAEIYYQ--ARAVS 151

Query: 138 TDKLRIVYISINSVVYLIQVCIWIYIGVDDNSVVELVGKIYIAVVSFIAAIGFLIYGGRL 197
           TD LR  + +IN+VVY++Q+ +W+ +      V+ ++ K++ A VS  AA+GFL+YGGRL
Sbjct: 152 TDGLRPSFFTINAVVYVVQIALWLVLWWKPVRVMVILSKMFFAGVSLFAALGFLLYGGRL 211

Query: 198 FFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFDADASLDVLDHPLLNF 257
           F ML+RFP+ESKGRRKKL EVG VT ICFTCFLIRC ++  +AFD  A+LDVLDHP+LNF
Sbjct: 212 FLMLQRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFAAFDEGANLDVLDHPILNF 271

Query: 258 IYYLLVEILPSALVLYILRKLPPKRISAQYHPIR 292
           IYYLLVEILPS+LVL+ILRKLPPKR   QYH IR
Sbjct: 272 IYYLLVEILPSSLVLFILRKLPPKRGITQYHQIR 303

[Close]

BLAST of Cp4.1LG09g08990.1 vs. TAIR 10
Match: AT1G14530.1 (Protein of unknown function (DUF1084) )

HSP 1 Score: 334.3 bits (856), Expect = 9.5e-92
Identity = 168/272 (61.76%), Postives = 214/272 (78.68%), Query Frame = 0


Query: 20  SWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELRVPEYGWTTQKVFHLMNFIV 79
           +WW D+NES  WQDRIF+ L  +Y +VS +A+IQL+RI+LRVPEYGWTTQKVFH +NF+V
Sbjct: 24  NWWWDVNESPVWQDRIFHVLAVLYGIVSVIAVIQLVRIQLRVPEYGWTTQKVFHFLNFMV 83

Query: 80  NGVRAIVFGIHMQVFLLQPKVLLSLLLELPGLLFFSTYTLLVLFWAEIYHQASARSLPTD 139
           NGVRA+VF        +QP++L  +LL++P L FF+TY LLVLFWAEIY+Q  AR++ TD
Sbjct: 84  NGVRALVFLFRRDAQNMQPEILQHILLDIPSLAFFTTYALLVLFWAEIYYQ--ARAVSTD 143

Query: 140 KLRIVYISINSVVYLIQVCIWIYIGVDDNSVVELVGKIYIAVVSFIAAIGFLIYGGRLFF 199
            LR  + +IN+VVY+IQ+ +W+ +      ++ ++ K++ A VS  AA+GFL+YGGRLF 
Sbjct: 144 GLRPSFFTINAVVYVIQIALWLVLWWKPVHLMVIISKMFFAGVSLFAALGFLLYGGRLFL 203

Query: 200 MLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFDADASLDVLDHPLLNFIY 259
           ML+RFP+ESKGRRKKL EVG VT ICFTCFLIRC ++   AFD  A LDVLDHP+LNFIY
Sbjct: 204 MLQRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFDAFDDAADLDVLDHPILNFIY 263

Query: 260 YLLVEILPSALVLYILRKLPPKRISAQYHPIR 292
           YLLVEILPS+LVL+ILRKLPPKR   QYH I+
Sbjct: 264 YLLVEILPSSLVLFILRKLPPKRGITQYHQIQ 293

[Close]

BLAST of Cp4.1LG09g08990.1 vs. TAIR 10
Match: AT1G14530.2 (Protein of unknown function (DUF1084) )

HSP 1 Score: 334.3 bits (856), Expect = 9.5e-92
Identity = 168/272 (61.76%), Postives = 214/272 (78.68%), Query Frame = 0


Query: 20  SWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELRVPEYGWTTQKVFHLMNFIV 79
           +WW D+NES  WQDRIF+ L  +Y +VS +A+IQL+RI+LRVPEYGWTTQKVFH +NF+V
Sbjct: 24  NWWWDVNESPVWQDRIFHVLAVLYGIVSVIAVIQLVRIQLRVPEYGWTTQKVFHFLNFMV 83

Query: 80  NGVRAIVFGIHMQVFLLQPKVLLSLLLELPGLLFFSTYTLLVLFWAEIYHQASARSLPTD 139
           NGVRA+VF        +QP++L  +LL++P L FF+TY LLVLFWAEIY+Q  AR++ TD
Sbjct: 84  NGVRALVFLFRRDAQNMQPEILQHILLDIPSLAFFTTYALLVLFWAEIYYQ--ARAVSTD 143

Query: 140 KLRIVYISINSVVYLIQVCIWIYIGVDDNSVVELVGKIYIAVVSFIAAIGFLIYGGRLFF 199
            LR  + +IN+VVY+IQ+ +W+ +      ++ ++ K++ A VS  AA+GFL+YGGRLF 
Sbjct: 144 GLRPSFFTINAVVYVIQIALWLVLWWKPVHLMVIISKMFFAGVSLFAALGFLLYGGRLFL 203

Query: 200 MLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFDADASLDVLDHPLLNFIY 259
           ML+RFP+ESKGRRKKL EVG VT ICFTCFLIRC ++   AFD  A LDVLDHP+LNFIY
Sbjct: 204 MLQRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFDAFDDAADLDVLDHPILNFIY 263

Query: 260 YLLVEILPSALVLYILRKLPPKRISAQYHPIR 292
           YLLVEILPS+LVL+ILRKLPPKR   QYH I+
Sbjct: 264 YLLVEILPSSLVLFILRKLPPKRGITQYHQIQ 293

[Close]

BLAST of Cp4.1LG09g08990.1 vs. TAIR 10
Match: AT3G59090.1 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: tobamovirus multiplication 1 (TAIR:AT4G21790.1); Has 196 Blast hits to 195 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 188; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). )

HSP 1 Score: 64.3 bits (155), Expect = 1.8e-10
Identity = 79/310 (25.48%), Postives = 129/310 (41.61%), Query Frame = 0


Query: 35  IFYSLCAVY--ALVSAVALIQLIRIELRVPEYGWTTQKVFHLMNFIVNGVRAIVFGIHMQ 94
           I  +LC  +  A ++ +A +QL R   R  + GWT QKV HLM    N    I F   + 
Sbjct: 21  IAVNLCLAFIDAALAFIAFLQLSRFHRRNKQVGWTRQKVLHLMIASSNTGSVIYFVAAVI 80

Query: 95  VFLLQ----PKVLLSLLLELPGLLFFSTYTLLVLFWAEIYHQAS---------------- 154
               +       L  LL+  P +LF +T+ LL+ FW ++ HQ +                
Sbjct: 81  ATCTRWHHWSNALGFLLMAFPKILFLATFLLLLSFWVDVCHQGNGEEDDDDDEENSIQQV 140

Query: 155 ----ARSLP--------------------TDKLRIVYISINSVVYLIQVCIWIYIGVDDN 214
               ++S P                    T +  +V   I   + +I   I I+I    N
Sbjct: 141 LLEKSKSKPGSSNASDRRKCCSFHGIHVGTRQKFVVAAIILVFILMISFAILIWIASGKN 200

Query: 215 SV-VELVGKIYI---AVVSFIAAIGFLIYGGRLFFMLRRFPIES-KGRRKKLHEVGSVTA 274
            +   L+ ++Y+   A +  I   G   YG RL F LR+   E      +K+  +  V+ 
Sbjct: 201 PMNSSLLAEVYVDIFAAIILITGGGICFYGLRLLFNLRKVRSEQVSSEMRKVSGLAGVSV 260

Query: 275 ICFTCFLIRCFVVALSAFD--ADASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPK 292
           +CFT   +   +  +  F     + L  +   +L  IYY +   +P A VL++LR+LPP+
Sbjct: 261 VCFTVSSLIALLTHIPLFYHWNPSKLHGIKALVLLIIYYFIGSTVPLAFVLWVLRELPPQ 320

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g08990.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q402F4	6.4e-125	80.00	Tobamovirus multiplication protein 1 OS=Nicotiana tabacum OX=4097 GN=TOM1 PE=1 S...	[more]
Q9FEG2	5.0e-122	78.87	Tobamovirus multiplication protein 1 OS=Arabidopsis thaliana OX=3702 GN=TOM1 PE=...	[more]
Q9ZUM2	2.0e-94	63.14	Tobamovirus multiplication protein 3 OS=Arabidopsis thaliana OX=3702 GN=TOM3 PE=...	[more]
Q402F3	7.9e-91	61.68	Tobamovirus multiplication protein 3 OS=Nicotiana tabacum OX=4097 GN=TOM3 PE=1 S...	[more]
Q948R8	1.3e-90	61.76	Protein TOM THREE HOMOLOG 1 OS=Arabidopsis thaliana OX=3702 GN=THH1 PE=2 SV=1	[more]

BLAST of Cp4.1LG09g08990.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7012372.1	6.06e-198	99.31	Tobamovirus multiplication protein 1 [Cucurbita argyrosperma subsp. argyrosperma...	[more]
XP_023542730.1	1.09e-195	99.31	tobamovirus multiplication protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022954819.1	3.12e-195	98.63	tobamovirus multiplication protein 1-like [Cucurbita moschata]	[more]
XP_022994300.1	6.30e-195	98.63	tobamovirus multiplication protein 1-like [Cucurbita maxima]	[more]
KAG6573196.1	8.94e-195	98.63	Tobamovirus multiplication protein 1, partial [Cucurbita argyrosperma subsp. sor...	[more]

BLAST of Cp4.1LG09g08990.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GU53	1.51e-195	98.63	tobamovirus multiplication protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1K0T9	3.05e-195	98.63	tobamovirus multiplication protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A0A0LU94	6.58e-190	95.53	DUF1084 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G063580 PE=...	[more]
A0A5A7UQF6	6.04e-189	94.86	Tobamovirus multiplication protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5D3BHU2	1.27e-187	94.50	Tobamovirus multiplication protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]

BLAST of Cp4.1LG09g08990.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21790.1	3.6e-123	78.87	tobamovirus multiplication 1	[more]
AT2G02180.1	1.4e-95	63.14	tobamovirus multiplication protein 3	[more]
AT1G14530.1	9.5e-92	61.76	Protein of unknown function (DUF1084)	[more]
AT1G14530.2	9.5e-92	61.76	Protein of unknown function (DUF1084)	[more]
AT3G59090.1	1.8e-10	25.48	CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009457	THH1/TOM1/TOM3 domain	PFAM	PF06454	DUF1084	coord: 18..291 e-value: 5.5E-141 score: 468.7
None	No IPR available	PANTHER	PTHR31142:SF1	TOBAMOVIRUS MULTIPLICATION PROTEIN 1	coord: 11..291
IPR040226	THH1/TOM1/TOM3	PANTHER	PTHR31142	TOBAMOVIRUS MULTIPLICATION PROTEIN 1-LIKE ISOFORM X1	coord: 11..291

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG09g08990	Cp4.1LG09g08990	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG09g08990.1:five_prime_utr:001	Cp4.1LG09g08990.1:five_prime_utr:001	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG09g08990.1:exon:001	Cp4.1LG09g08990.1:exon:001	exon
Cp4.1LG09g08990.1:exon:002	Cp4.1LG09g08990.1:exon:002	exon
Cp4.1LG09g08990.1:exon:003	Cp4.1LG09g08990.1:exon:003	exon
Cp4.1LG09g08990.1:exon:004	Cp4.1LG09g08990.1:exon:004	exon
Cp4.1LG09g08990.1:exon:005	Cp4.1LG09g08990.1:exon:005	exon
Cp4.1LG09g08990.1:exon:006	Cp4.1LG09g08990.1:exon:006	exon
Cp4.1LG09g08990.1:exon:007	Cp4.1LG09g08990.1:exon:007	exon
Cp4.1LG09g08990.1:exon:008	Cp4.1LG09g08990.1:exon:008	exon
Cp4.1LG09g08990.1:exon:009	Cp4.1LG09g08990.1:exon:009	exon
Cp4.1LG09g08990.1:exon:010	Cp4.1LG09g08990.1:exon:010	exon
Cp4.1LG09g08990.1:exon:011	Cp4.1LG09g08990.1:exon:011	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG09g08990.1:cds:001	Cp4.1LG09g08990.1:cds:001	CDS
Cp4.1LG09g08990.1:cds:002	Cp4.1LG09g08990.1:cds:002	CDS
Cp4.1LG09g08990.1:cds:003	Cp4.1LG09g08990.1:cds:003	CDS
Cp4.1LG09g08990.1:cds:004	Cp4.1LG09g08990.1:cds:004	CDS
Cp4.1LG09g08990.1:cds:005	Cp4.1LG09g08990.1:cds:005	CDS
Cp4.1LG09g08990.1:cds:006	Cp4.1LG09g08990.1:cds:006	CDS
Cp4.1LG09g08990.1:cds:007	Cp4.1LG09g08990.1:cds:007	CDS
Cp4.1LG09g08990.1:cds:008	Cp4.1LG09g08990.1:cds:008	CDS
Cp4.1LG09g08990.1:cds:009	Cp4.1LG09g08990.1:cds:009	CDS
Cp4.1LG09g08990.1:cds:010	Cp4.1LG09g08990.1:cds:010	CDS
Cp4.1LG09g08990.1:cds:011	Cp4.1LG09g08990.1:cds:011	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG09g08990.1:three_prime_utr:001	Cp4.1LG09g08990.1:three_prime_utr:001	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG09g08990.1	Cp4.1LG09g08990.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009705	plant-type vacuole membrane