Cp4.1LG07g10540.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG07g10540.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	rRNA methyltransferase 1, mitochondrial
Location	Cp4.1LG07: 9397842 .. 9399392 (-)
Sequence length	1551
RNA-Seq Expression	Cp4.1LG07g10540.1
Synteny	Cp4.1LG07g10540.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCTTTCAATTCGTAGTCACCATTGCTCTCCAGAAATTAGGAAATTAGTAAGCCCCAAATTGAGCTCACCTGCTTTGACCATTGAATCTTCTCTGAATTCTCGAACGTATTCGAGCTCCCATTCAATTAAAGACGAAGGAGTGAAATCTAGGGATAAGCTTCCTTGGTTAGCAGCAACAAACAGTTTTGAGAAGGCAAGATGGTTGGATAAATCAACAACAAAGAAGAGAGGGGATCGATCATCATGGAAGGAATCAAATTCTGGGTCAGAAAAGATGAGGTCTTCATGGGACTATTCAAAGAAGACAATTGGGAAAAGGGGTAATAGGCCATCTGGGGATGAACAGGAAAAGAGATATGGCAAAGCACCTGTTGGAAGCGCTTACCGTTCTTCTTGGGAGGTCTCTGCAGAGAAGCTTGCTACACAACGCATGGAGTATGCAGAGGAAAGAAGAGAAAGTAGGAGGGGAAGAGTTGATAATGAGGAGCAGCGAAGCCGTGATGTCGAAGTAGAAGATGAAGAAACGGAGGCCATTGCTGATCCGAGATGGGATAAGATCAAAAGTAAATTTGAGAGACCTGAGTTTCAGAGATGGAATAAACAGGAAAGCTTGAGTAGAAAAACATGGAAGGAAGCTTCTGAATCCACTCTGCCTAAAATGGTTGGTGAAGGTGTTTATGGTGTCGGACCAGTGTTGGCTGCTTTGTCAGCTGGAAGAAGAGAGTTCTATGCATTGTATATGCAAGAAGGACTCGACTTGAACAACAATAACAAGAAGAAGAAGGACAAGAAAGGGTTTGAGAAAGTTCTTAGGTTGGCTGAAAGGAATGCGTTAACCGTAAAGGAAATATCGAAGCATGATTTGAATATGCTTTCGGATAACCGTCCACATCAAGGTCTCGTGCTAGACGCCTCTCCGTTGGAAATGGTAAAAATAATGGAGTTGGATCCTGTCTCACTTGAAGAAGACAAAGGCTCGCTTTGGTTAGCGTTGGACGAAGTTACAGACCCTCAAAACTTGGGGGCGATAATAAGATCGGCTTATTTCTTTGGTGCGTCGGGGGTTGTGTTATGTGCAAAGAATTCAGCTCCATTAAGTGGTGTTGTTAGTAAAGCTAGTGCTGGTTCGCTCGAGTTGATGGAGCTTAGGTATTGTAAGAACATGATGCAATTCTTAACATCCTCGGCTGAGAACGGTTGGCGAGTCCTTGGAGCTTCGGTTTCTTCGAAATCCATTGATTTGGAAGAGGTACCACCGGGGGCACCAACAATCCTAGTGTTGGGCAGTGAAGGCACTGGTTTGAGGCCCTTGGTGGAGAGATCTTGTTCACAGCTTGTTAAAATACCTGGGAATATTCCAGTTGATATAGCAATGGATAAAGATAATGACATCGAAACAACACAACCAACAAAGGAAAGCTCGGTTGACGAGTTTCGATCCTTCATGGCTGTGGAGAGCTTAAACGTCAGCGTTGCAGCAGGCGTGCTTGTTCACCACCTAATTGGAAGCAATTACAAGAATGAATCGTATGAACCCTCTATTTAA

mRNA sequence

ATGAACCTTTCAATTCGTAGTCACCATTGCTCTCCAGAAATTAGGAAATTAGTAAGCCCCAAATTGAGCTCACCTGCTTTGACCATTGAATCTTCTCTGAATTCTCGAACGTATTCGAGCTCCCATTCAATTAAAGACGAAGGAGTGAAATCTAGGGATAAGCTTCCTTGGTTAGCAGCAACAAACAGTTTTGAGAAGGCAAGATGGTTGGATAAATCAACAACAAAGAAGAGAGGGGATCGATCATCATGGAAGGAATCAAATTCTGGGTCAGAAAAGATGAGGTCTTCATGGGACTATTCAAAGAAGACAATTGGGAAAAGGGGTAATAGGCCATCTGGGGATGAACAGGAAAAGAGATATGGCAAAGCACCTGTTGGAAGCGCTTACCGTTCTTCTTGGGAGGTCTCTGCAGAGAAGCTTGCTACACAACGCATGGAGTATGCAGAGGAAAGAAGAGAAAGTAGGAGGGGAAGAGTTGATAATGAGGAGCAGCGAAGCCGTGATGTCGAAGTAGAAGATGAAGAAACGGAGGCCATTGCTGATCCGAGATGGGATAAGATCAAAAGTAAATTTGAGAGACCTGAGTTTCAGAGATGGAATAAACAGGAAAGCTTGAGTAGAAAAACATGGAAGGAAGCTTCTGAATCCACTCTGCCTAAAATGGTTGGTGAAGGTGTTTATGGTGTCGGACCAGTGTTGGCTGCTTTGTCAGCTGGAAGAAGAGAGTTCTATGCATTGTATATGCAAGAAGGACTCGACTTGAACAACAATAACAAGAAGAAGAAGGACAAGAAAGGGTTTGAGAAAGTTCTTAGGTTGGCTGAAAGGAATGCGTTAACCGTAAAGGAAATATCGAAGCATGATTTGAATATGCTTTCGGATAACCGTCCACATCAAGGTCTCGTGCTAGACGCCTCTCCGTTGGAAATGGTAAAAATAATGGAGTTGGATCCTGTCTCACTTGAAGAAGACAAAGGCTCGCTTTGGTTAGCGTTGGACGAAGTTACAGACCCTCAAAACTTGGGGGCGATAATAAGATCGGCTTATTTCTTTGGTGCGTCGGGGGTTGTGTTATGTGCAAAGAATTCAGCTCCATTAAGTGGTGTTGTTAGTAAAGCTAGTGCTGGTTCGCTCGAGTTGATGGAGCTTAGGTATTGTAAGAACATGATGCAATTCTTAACATCCTCGGCTGAGAACGGTTGGCGAGTCCTTGGAGCTTCGGTTTCTTCGAAATCCATTGATTTGGAAGAGGTACCACCGGGGGCACCAACAATCCTAGTGTTGGGCAGTGAAGGCACTGGTTTGAGGCCCTTGGTGGAGAGATCTTGTTCACAGCTTGTTAAAATACCTGGGAATATTCCAGTTGATATAGCAATGGATAAAGATAATGACATCGAAACAACACAACCAACAAAGGAAAGCTCGGTTGACGAGTTTCGATCCTTCATGGCTGTGGAGAGCTTAAACGTCAGCGTTGCAGCAGGCGTGCTTGTTCACCACCTAATTGGAAGCAATTACAAGAATGAATCGTATGAACCCTCTATTTAA

Coding sequence (CDS)

ATGAACCTTTCAATTCGTAGTCACCATTGCTCTCCAGAAATTAGGAAATTAGTAAGCCCCAAATTGAGCTCACCTGCTTTGACCATTGAATCTTCTCTGAATTCTCGAACGTATTCGAGCTCCCATTCAATTAAAGACGAAGGAGTGAAATCTAGGGATAAGCTTCCTTGGTTAGCAGCAACAAACAGTTTTGAGAAGGCAAGATGGTTGGATAAATCAACAACAAAGAAGAGAGGGGATCGATCATCATGGAAGGAATCAAATTCTGGGTCAGAAAAGATGAGGTCTTCATGGGACTATTCAAAGAAGACAATTGGGAAAAGGGGTAATAGGCCATCTGGGGATGAACAGGAAAAGAGATATGGCAAAGCACCTGTTGGAAGCGCTTACCGTTCTTCTTGGGAGGTCTCTGCAGAGAAGCTTGCTACACAACGCATGGAGTATGCAGAGGAAAGAAGAGAAAGTAGGAGGGGAAGAGTTGATAATGAGGAGCAGCGAAGCCGTGATGTCGAAGTAGAAGATGAAGAAACGGAGGCCATTGCTGATCCGAGATGGGATAAGATCAAAAGTAAATTTGAGAGACCTGAGTTTCAGAGATGGAATAAACAGGAAAGCTTGAGTAGAAAAACATGGAAGGAAGCTTCTGAATCCACTCTGCCTAAAATGGTTGGTGAAGGTGTTTATGGTGTCGGACCAGTGTTGGCTGCTTTGTCAGCTGGAAGAAGAGAGTTCTATGCATTGTATATGCAAGAAGGACTCGACTTGAACAACAATAACAAGAAGAAGAAGGACAAGAAAGGGTTTGAGAAAGTTCTTAGGTTGGCTGAAAGGAATGCGTTAACCGTAAAGGAAATATCGAAGCATGATTTGAATATGCTTTCGGATAACCGTCCACATCAAGGTCTCGTGCTAGACGCCTCTCCGTTGGAAATGGTAAAAATAATGGAGTTGGATCCTGTCTCACTTGAAGAAGACAAAGGCTCGCTTTGGTTAGCGTTGGACGAAGTTACAGACCCTCAAAACTTGGGGGCGATAATAAGATCGGCTTATTTCTTTGGTGCGTCGGGGGTTGTGTTATGTGCAAAGAATTCAGCTCCATTAAGTGGTGTTGTTAGTAAAGCTAGTGCTGGTTCGCTCGAGTTGATGGAGCTTAGGTATTGTAAGAACATGATGCAATTCTTAACATCCTCGGCTGAGAACGGTTGGCGAGTCCTTGGAGCTTCGGTTTCTTCGAAATCCATTGATTTGGAAGAGGTACCACCGGGGGCACCAACAATCCTAGTGTTGGGCAGTGAAGGCACTGGTTTGAGGCCCTTGGTGGAGAGATCTTGTTCACAGCTTGTTAAAATACCTGGGAATATTCCAGTTGATATAGCAATGGATAAAGATAATGACATCGAAACAACACAACCAACAAAGGAAAGCTCGGTTGACGAGTTTCGATCCTTCATGGCTGTGGAGAGCTTAAACGTCAGCGTTGCAGCAGGCGTGCTTGTTCACCACCTAATTGGAAGCAATTACAAGAATGAATCGTATGAACCCTCTATTTAA

Protein sequence

MNLSIRSHHCSPEIRKLVSPKLSSPALTIESSLNSRTYSSSHSIKDEGVKSRDKLPWLAATNSFEKARWLDKSTTKKRGDRSSWKESNSGSEKMRSSWDYSKKTIGKRGNRPSGDEQEKRYGKAPVGSAYRSSWEVSAEKLATQRMEYAEERRESRRGRVDNEEQRSRDVEVEDEETEAIADPRWDKIKSKFERPEFQRWNKQESLSRKTWKEASESTLPKMVGEGVYGVGPVLAALSAGRREFYALYMQEGLDLNNNNKKKKDKKGFEKVLRLAERNALTVKEISKHDLNMLSDNRPHQGLVLDASPLEMVKIMELDPVSLEEDKGSLWLALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRVLGASVSSKSIDLEEVPPGAPTILVLGSEGTGLRPLVERSCSQLVKIPGNIPVDIAMDKDNDIETTQPTKESSVDEFRSFMAVESLNVSVAAGVLVHHLIGSNYKNESYEPSI

Homology

[Close]

BLAST of Cp4.1LG07g10540.1 vs. ExPASy Swiss-Prot
Match: Q76NT0 (rRNA methyltransferase 1, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=mrm1 PE=3 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 8.3e-35
Identity = 97/294 (32.99%), Postives = 150/294 (51.02%), Query Frame = 0


Query: 250 QEGLDLNNNNKKKK-------DKK---GFEKVLRLAERNALTVKEISKHDLNMLSDNRPH 309
           +E  D NNNN  KK       D+K     +++++ + +  + V+ ++K  L+  S  RPH
Sbjct: 262 EEEEDNNNNNNIKKTTFNRYNDRKNLVALKEIVKNSFKLKIPVRSVNKGTLDSFSKGRPH 321

Query: 310 QGLVLDASPLEMVKIMELDPVSLEE-----------------------DKGSLWLALDEV 369
           QG++LDASPL ++ I  L+   + E                       DK  LWL LDE+
Sbjct: 322 QGIILDASPLTLLNIDFLEKFDINERVNKRMNGGGGGGGGGGGNKINNDKYPLWLVLDEL 381

Query: 370 TDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTS 429
            DPQN+GAIIR+  FF   GVV+  KNS+P++   SK+S+G+ E   +   +++  FL S
Sbjct: 382 WDPQNVGAIIRNCSFFNIDGVVISNKNSSPITPAASKSSSGACESFVINRTESIEGFLKS 441

Query: 430 SAENGWRVLGASV-----SSKSIDLEEVPPGAPTILVLGSEGTGLRPLVERSCSQLVKIP 489
           S  NGW V+G S+     +   +D+ ++    PTIL+LG+EG GL+P V   C++ +KI 
Sbjct: 442 SQRNGWNVVGTSLDDLNENQPCLDINQIKLDQPTILILGNEGFGLKPSVLEICNKTIKIV 501

Query: 490 GNIPVDIAMDKDNDIETTQPTKESSVDEFRSFMAVESLNVSVAAGVLVHHLIGS 506
           G                                 ++SLNVSV +G+L+H L+ S
Sbjct: 502 G-----------------------------GNYKIDSLNVSVTSGILIHTLLSS 526

[Close]

BLAST of Cp4.1LG07g10540.1 vs. ExPASy Swiss-Prot
Match: O94631 (rRNA methyltransferase 1, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mrm1 PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 2.5e-31
Identity = 114/335 (34.03%), Postives = 164/335 (48.96%), Query Frame = 0


Query: 205 SLSRKTWKEA-----SESTLPKMVGEGVYGVGPVLAALSAGRREFYALYMQEGLDLNNNN 264
           +L+R+  K+A      E  L K   E V+G   V  AL+  +RE  ALY+Q   D+++  
Sbjct: 7   NLAREVPKKAKAHLSKERRLIKEDSEFVFGTHSVKNALATRKRECRALYVQNA-DIHSE- 66

Query: 265 KKKKDKKGFEKVLRLAERNALTVKEISKHDLNMLSDNRPHQGLVLDASPLEMVKIMEL-- 324
                   FE+ L   +   + +K ++K  LN ++  RPH G+VL+AS L +  I +L  
Sbjct: 67  --------FEEFLNKLQYK-IPIKSVNKEHLNQITACRPHNGVVLEASSLNVPTISDLLF 126

Query: 325 --------------DPVSLEEDKGS-------LWLALDEVTDPQNLGAIIRSAYFFGASG 384
                             L E K S       L++ +D +TDPQN+GA+IRSAY  GA G
Sbjct: 127 PAGEEYNNKNGQDSPHNDLNEGKSSSSDNYPPLYVYVDGITDPQNMGAVIRSAYILGAKG 186

Query: 385 VVLCAKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRVLGASVSSKSIDL 444
           ++L  K++  LS VVSKASAG+LE+  + + KN M FL +S   GW+V+G   +      
Sbjct: 187 ILLSKKHNTFLSPVVSKASAGALEVFNISHVKNPMVFLRNSVLKGWKVIGTKPALPDNKD 246

Query: 445 EEVPP--------GAPTILVLGSEGTGLRPLVERSCSQLVKIPGNIPVDIAMDKDNDIET 504
           +   P          P ILVLGSE  GLR  +   CS  V IPG                
Sbjct: 247 QIYTPHKIKTELMNEPKILVLGSE-KGLRTNILTQCSHYVSIPGG--------------- 300

[Close]

BLAST of Cp4.1LG07g10540.1 vs. ExPASy Swiss-Prot
Match: Q6IN84 (rRNA methyltransferase 1, mitochondrial OS=Homo sapiens OX=9606 GN=MRM1 PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.6e-30
Identity = 96/292 (32.88%), Postives = 146/292 (50.00%), Query Frame = 0


Query: 225 EGVYGVGPVLAALSAGRREFYALYMQEGLDLNNNNKKKKDKKGFE----KVLRLAERNAL 284
           E ++G+ P L AL A RR    L +Q G            K G +    ++LR+AE   +
Sbjct: 50  ELLFGMTPCLLALQAARRSVARLLLQAG------------KAGLQGKRAELLRMAEARDI 109

Query: 285 TVKEISKHDLNMLSDNRPHQGLVLDASPLEMVKIMELDPVSLEEDKGSLWLALDEVTDPQ 344
            V    +  L+ +   + HQG+ ++ SPL      E    S  +D   LWL LD + DP+
Sbjct: 110 PVLRPRRQKLDTMCRYQVHQGVCMEVSPLRPRPWREAGEASPGDDPQQLWLVLDGIQDPR 169

Query: 345 NLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAEN 404
           N GA++RSA+F G   V+   +NS PL+ VVSK+SAG++E+M++    ++  FL + A+ 
Sbjct: 170 NFGAVLRSAHFLGVDKVITSRRNSCPLTPVVSKSSAGAMEVMDVFSTDDLTGFLQTKAQQ 229

Query: 405 GWRVLG--ASVSSKSIDLEEVPPGA--------PTILVLGSEGTGLRPLVERSCSQLVKI 464
           GW V G     S++     E+P  +        PT+LVLG+EG+GL   V+ SC  L+  
Sbjct: 230 GWLVAGTVGCPSTEDPQSSEIPIMSCLEFLWERPTLLVLGNEGSGLSQEVQASCQLLL-- 289

Query: 465 PGNIPVDIAMDKDNDIETTQPTKESSVDEFRSFMAVESLNVSVAAGVLVHHL 503
                            T  P ++           +ESLNVSVAAG+L+H +
Sbjct: 290 -----------------TILPRRQLP-------PGLESLNVSVAAGILLHSI 303

[Close]

BLAST of Cp4.1LG07g10540.1 vs. ExPASy Swiss-Prot
Match: Q99J25 (rRNA methyltransferase 1, mitochondrial OS=Mus musculus OX=10090 GN=Mrm1 PE=2 SV=2)

HSP 1 Score: 134.0 bits (336), Expect = 4.7e-30
Identity = 100/292 (34.25%), Postives = 143/292 (48.97%), Query Frame = 0


Query: 225 EGVYGVGPVLAALSAGRREFYALYMQEGLDLNNNNKKKKDKKGFE----KVLRLAERNAL 284
           E ++G+ P L AL A RR    L +Q G            K G +    ++LR+AE   +
Sbjct: 48  ERLFGLSPCLLALRAARRRVARLLLQAG------------KAGLQGERAELLRVAEARGI 107

Query: 285 TVKEISKHDLNMLSDNRPHQGLVLDASPLEMVKIMELDPVSLEEDKGSLWLALDEVTDPQ 344
            V    +  L+ L   + HQG+ ++ SPL      E    S  +D   LWL L+ + DP+
Sbjct: 108 PVLRPRRQKLDALCGYQVHQGVCMEVSPLRPRPCDEAADTSSGDDPQQLWLVLEGLQDPR 167

Query: 345 NLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAEN 404
           NLGA++RSA+F G   V+   +NS PL+ VVSKASAG++E+M++    ++  FL + A+ 
Sbjct: 168 NLGAVMRSAHFLGVDRVITSQRNSCPLTPVVSKASAGAMEVMDVFATPDLPGFLQAKAQQ 227

Query: 405 GWRVLGA--------SVSSK--SIDLEEVPPGAPTILVLGSEGTGLRPLVERSCSQLVKI 464
           GW V+G         S SSK       E     PT+LVLGSEG+GL   V  SC  L+  
Sbjct: 228 GWLVVGTVGCPGPEISQSSKVPITSCLEFVWDRPTLLVLGSEGSGLSQEVFASCQLLL-- 287

Query: 465 PGNIPVDIAMDKDNDIETTQPTKESSVDEFRSFMAVESLNVSVAAGVLVHHL 503
                            T  P +            +ESLNVSVA G+L+H +
Sbjct: 288 -----------------TILPRRHLP-------PGLESLNVSVATGILLHSI 301

[Close]

BLAST of Cp4.1LG07g10540.1 vs. ExPASy Swiss-Prot
Match: A4T5L0 (Uncharacterized tRNA/rRNA methyltransferase Mflv_1447 OS=Mycolicibacterium gilvum (strain PYR-GCK) OX=350054 GN=Mflv_1447 PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 3.9e-24
Identity = 88/275 (32.00%), Postives = 133/275 (48.36%), Query Frame = 0


Query: 225 EGVYGVGPVLAALSAGRREFYALYMQEGLDLNNNNKKKKDKKGFEKVLRLAERNALTVKE 284
           E V G  PV+  L AG     ALY+  G D         D++  E V   A+R  +++ E
Sbjct: 71  EIVLGRNPVVECLRAG-VPATALYVALGTD--------ADERLTESVQMAADR-GISILE 130

Query: 285 ISKHDLNMLSDNRPHQGLVLDASPLEMVKIMELDPVSLEEDKGSLWLALDEVTDPQNLGA 344
           + +HDL+ ++ N  HQG+ L   P       +L   +  +   +L +ALD ++DP+NLGA
Sbjct: 131 VQRHDLDRMAANGLHQGIALQVPPYAYAHPDDLLRDAKSDAAPALLVALDNISDPRNLGA 190

Query: 345 IIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRV 404
           I+RS   FG  GVVL  + SA ++ V  + SAG+     +    N+ + L   A+ G +V
Sbjct: 191 IVRSVAAFGGHGVVLPQRRSASVTAVAWRTSAGAAARTPVARATNLNRTLKQYADAGLQV 250

Query: 405 LGASVSSKSIDLEEVPPGAPTILVLGSEGTGLRPLVERSCSQLVKIPGNIPVDIAMDKDN 464
           +G      +  ++E+    PTI+V+GSEG GL  LV  +C ++V IP   P         
Sbjct: 251 VGLDAGGDT-TIDEIDGLTPTIVVVGSEGKGLSRLVRENCDRIVSIPMAGP--------- 304

Query: 465 DIETTQPTKESSVDEFRSFMAVESLNVSVAAGVLV 500
                                 ESLN SVAAGV++
Sbjct: 311 ---------------------TESLNASVAAGVVL 304

[Close]

BLAST of Cp4.1LG07g10540.1 vs. NCBI nr
Match: XP_023536668.1 (rRNA methyltransferase 1, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 989 bits (2557), Expect = 0.0
Identity = 516/516 (100.00%), Postives = 516/516 (100.00%), Query Frame = 0


Query: 1   MNLSIRSHHCSPEIRKLVSPKLSSPALTIESSLNSRTYSSSHSIKDEGVKSRDKLPWLAA 60
           MNLSIRSHHCSPEIRKLVSPKLSSPALTIESSLNSRTYSSSHSIKDEGVKSRDKLPWLAA
Sbjct: 55  MNLSIRSHHCSPEIRKLVSPKLSSPALTIESSLNSRTYSSSHSIKDEGVKSRDKLPWLAA 114

Query: 61  TNSFEKARWLDKSTTKKRGDRSSWKESNSGSEKMRSSWDYSKKTIGKRGNRPSGDEQEKR 120
           TNSFEKARWLDKSTTKKRGDRSSWKESNSGSEKMRSSWDYSKKTIGKRGNRPSGDEQEKR
Sbjct: 115 TNSFEKARWLDKSTTKKRGDRSSWKESNSGSEKMRSSWDYSKKTIGKRGNRPSGDEQEKR 174

Query: 121 YGKAPVGSAYRSSWEVSAEKLATQRMEYAEERRESRRGRVDNEEQRSRDVEVEDEETEAI 180
           YGKAPVGSAYRSSWEVSAEKLATQRMEYAEERRESRRGRVDNEEQRSRDVEVEDEETEAI
Sbjct: 175 YGKAPVGSAYRSSWEVSAEKLATQRMEYAEERRESRRGRVDNEEQRSRDVEVEDEETEAI 234

Query: 181 ADPRWDKIKSKFERPEFQRWNKQESLSRKTWKEASESTLPKMVGEGVYGVGPVLAALSAG 240
           ADPRWDKIKSKFERPEFQRWNKQESLSRKTWKEASESTLPKMVGEGVYGVGPVLAALSAG
Sbjct: 235 ADPRWDKIKSKFERPEFQRWNKQESLSRKTWKEASESTLPKMVGEGVYGVGPVLAALSAG 294

Query: 241 RREFYALYMQEGLDLNNNNKKKKDKKGFEKVLRLAERNALTVKEISKHDLNMLSDNRPHQ 300
           RREFYALYMQEGLDLNNNNKKKKDKKGFEKVLRLAERNALTVKEISKHDLNMLSDNRPHQ
Sbjct: 295 RREFYALYMQEGLDLNNNNKKKKDKKGFEKVLRLAERNALTVKEISKHDLNMLSDNRPHQ 354

Query: 301 GLVLDASPLEMVKIMELDPVSLEEDKGSLWLALDEVTDPQNLGAIIRSAYFFGASGVVLC 360
           GLVLDASPLEMVKIMELDPVSLEEDKGSLWLALDEVTDPQNLGAIIRSAYFFGASGVVLC
Sbjct: 355 GLVLDASPLEMVKIMELDPVSLEEDKGSLWLALDEVTDPQNLGAIIRSAYFFGASGVVLC 414

Query: 361 AKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRVLGASVSSKSIDLEEVP 420
           AKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRVLGASVSSKSIDLEEVP
Sbjct: 415 AKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRVLGASVSSKSIDLEEVP 474

Query: 421 PGAPTILVLGSEGTGLRPLVERSCSQLVKIPGNIPVDIAMDKDNDIETTQPTKESSVDEF 480
           PGAPTILVLGSEGTGLRPLVERSCSQLVKIPGNIPVDIAMDKDNDIETTQPTKESSVDEF
Sbjct: 475 PGAPTILVLGSEGTGLRPLVERSCSQLVKIPGNIPVDIAMDKDNDIETTQPTKESSVDEF 534

Query: 481 RSFMAVESLNVSVAAGVLVHHLIGSNYKNESYEPSI 516
           RSFMAVESLNVSVAAGVLVHHLIGSNYKNESYEPSI
Sbjct: 535 RSFMAVESLNVSVAAGVLVHHLIGSNYKNESYEPSI 570

[Close]

BLAST of Cp4.1LG07g10540.1 vs. NCBI nr
Match: KAG7021321.1 (rRNA methyltransferase 1, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 959 bits (2479), Expect = 0.0
Identity = 502/515 (97.48%), Postives = 505/515 (98.06%), Query Frame = 0


Query: 1   MNLSIRSHHCSPEIRKLVSPKLSSPALTIESSLNSRTYSSSHSIKDEGVKSRDKLPWLAA 60
           MNLSIRSHHCSPEIRKLVSPKLSSPALTIESSL SRTYSSSHSIKDEGVKSRDKLPWLAA
Sbjct: 64  MNLSIRSHHCSPEIRKLVSPKLSSPALTIESSLKSRTYSSSHSIKDEGVKSRDKLPWLAA 123

Query: 61  TNSFEKARWLDKSTTKKRGDRSSWKESNSGSEKMRSSWDYSKKTIGKRGNRPSGDEQEKR 120
           TNSFEKARWL KSTTKKRGDRSSWKESNSGSEKMRSSWDYSKKT GKRGNR SGDE EKR
Sbjct: 124 TNSFEKARWLGKSTTKKRGDRSSWKESNSGSEKMRSSWDYSKKTFGKRGNRASGDEPEKR 183

Query: 121 YGKAPVGSAYRSSWEVSAEKLATQRMEYAEERRESRRGRVDNEEQRSRDVEVEDEETEAI 180
           YGKAPVGS  RSSWEVSAEK ATQRMEYAEERRESRRGRVDNEEQ++RDVEVEDEETEAI
Sbjct: 184 YGKAPVGSTDRSSWEVSAEKFATQRMEYAEERRESRRGRVDNEEQQNRDVEVEDEETEAI 243

Query: 181 ADPRWDKIKSKFERPEFQRWNKQESLSRKTWKEASESTLPKMVGEGVYGVGPVLAALSAG 240
           ADPRWDKIKSKFERPEFQRWNKQES SRKTWKEASESTLPKMVGEGVYGVGPVLAALSAG
Sbjct: 244 ADPRWDKIKSKFERPEFQRWNKQESWSRKTWKEASESTLPKMVGEGVYGVGPVLAALSAG 303

Query: 241 RREFYALYMQEGLDLNNNNKKKKDKKGFEKVLRLAERNALTVKEISKHDLNMLSDNRPHQ 300
           RREFYALYMQEGLDLNNNNKKKKDKKGFEKVLRLAERNALTVKEISKHDLNMLSDNRPHQ
Sbjct: 304 RREFYALYMQEGLDLNNNNKKKKDKKGFEKVLRLAERNALTVKEISKHDLNMLSDNRPHQ 363

Query: 301 GLVLDASPLEMVKIMELDPVSLEEDKGSLWLALDEVTDPQNLGAIIRSAYFFGASGVVLC 360
           GLVLDASPLEMVKIMELDPVSLEEDKGSLWLALDEVTDPQNLGAIIRSAYFFGASGVVLC
Sbjct: 364 GLVLDASPLEMVKIMELDPVSLEEDKGSLWLALDEVTDPQNLGAIIRSAYFFGASGVVLC 423

Query: 361 AKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRVLGASVSSKSIDLEEVP 420
           AKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRVLGASVSSKSIDLEEVP
Sbjct: 424 AKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRVLGASVSSKSIDLEEVP 483

Query: 421 PGAPTILVLGSEGTGLRPLVERSCSQLVKIPGNIPVDIAMDKDNDIETTQPTKESSVDEF 480
           PGAPTILVLGSEGTGLRPLVERSCSQLVKIPGNIPVDIAMDK+NDIETTQPTKESSVDEF
Sbjct: 484 PGAPTILVLGSEGTGLRPLVERSCSQLVKIPGNIPVDIAMDKENDIETTQPTKESSVDEF 543

Query: 481 RSFMAVESLNVSVAAGVLVHHLIGSNYKNESYEPS 515
           RSFMAVESLNVSVAAGVLVHHLIGSNYKNESYE S
Sbjct: 544 RSFMAVESLNVSVAAGVLVHHLIGSNYKNESYETS 578

[Close]

BLAST of Cp4.1LG07g10540.1 vs. NCBI nr
Match: KAG6586465.1 (rRNA methyltransferase 1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 957 bits (2474), Expect = 0.0
Identity = 501/515 (97.28%), Postives = 504/515 (97.86%), Query Frame = 0


Query: 1   MNLSIRSHHCSPEIRKLVSPKLSSPALTIESSLNSRTYSSSHSIKDEGVKSRDKLPWLAA 60
           MNLSIRSHHCSPEIRKLVSPKLSSPALTIESSL SRTYSSSHSIKDEGVKSRDKLPWLAA
Sbjct: 1   MNLSIRSHHCSPEIRKLVSPKLSSPALTIESSLKSRTYSSSHSIKDEGVKSRDKLPWLAA 60

Query: 61  TNSFEKARWLDKSTTKKRGDRSSWKESNSGSEKMRSSWDYSKKTIGKRGNRPSGDEQEKR 120
           TNSFEKARWL KSTTKKRGDRSSWKESNSGSEKMRSSWDYSKKT GKRGNR SGDE EKR
Sbjct: 61  TNSFEKARWLGKSTTKKRGDRSSWKESNSGSEKMRSSWDYSKKTFGKRGNRASGDEPEKR 120

Query: 121 YGKAPVGSAYRSSWEVSAEKLATQRMEYAEERRESRRGRVDNEEQRSRDVEVEDEETEAI 180
           YGKAPVGS  RSSWEVSAEK ATQRMEYAEERRESRRGRVDNEEQ++ DVEVEDEETEAI
Sbjct: 121 YGKAPVGSTDRSSWEVSAEKFATQRMEYAEERRESRRGRVDNEEQQNHDVEVEDEETEAI 180

Query: 181 ADPRWDKIKSKFERPEFQRWNKQESLSRKTWKEASESTLPKMVGEGVYGVGPVLAALSAG 240
           ADPRWDKIKSKFERPEFQRWNKQES SRKTWKEASESTLPKMVGEGVYGVGPVLAALSAG
Sbjct: 181 ADPRWDKIKSKFERPEFQRWNKQESWSRKTWKEASESTLPKMVGEGVYGVGPVLAALSAG 240

Query: 241 RREFYALYMQEGLDLNNNNKKKKDKKGFEKVLRLAERNALTVKEISKHDLNMLSDNRPHQ 300
           RREFYALYMQEGLDLNNNNKKKKDKKGFEKVLRLAERNALTVKEISKHDLNMLSDNRPHQ
Sbjct: 241 RREFYALYMQEGLDLNNNNKKKKDKKGFEKVLRLAERNALTVKEISKHDLNMLSDNRPHQ 300

Query: 301 GLVLDASPLEMVKIMELDPVSLEEDKGSLWLALDEVTDPQNLGAIIRSAYFFGASGVVLC 360
           GLVLDASPLEMVKIMELDPVSLEEDKGSLWLALDEVTDPQNLGAIIRSAYFFGASGVVLC
Sbjct: 301 GLVLDASPLEMVKIMELDPVSLEEDKGSLWLALDEVTDPQNLGAIIRSAYFFGASGVVLC 360

Query: 361 AKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRVLGASVSSKSIDLEEVP 420
           AKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRVLGASVSSKSIDLEEVP
Sbjct: 361 AKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRVLGASVSSKSIDLEEVP 420

Query: 421 PGAPTILVLGSEGTGLRPLVERSCSQLVKIPGNIPVDIAMDKDNDIETTQPTKESSVDEF 480
           PGAPTILVLGSEGTGLRPLVERSCSQLVKIPGNIPVDIAMDK+NDIETTQPTKESSVDEF
Sbjct: 421 PGAPTILVLGSEGTGLRPLVERSCSQLVKIPGNIPVDIAMDKENDIETTQPTKESSVDEF 480

Query: 481 RSFMAVESLNVSVAAGVLVHHLIGSNYKNESYEPS 515
           RSFMAVESLNVSVAAGVLVHHLIGSNYKNESYE S
Sbjct: 481 RSFMAVESLNVSVAAGVLVHHLIGSNYKNESYETS 515

[Close]

BLAST of Cp4.1LG07g10540.1 vs. NCBI nr
Match: XP_022965658.1 (uncharacterized protein LOC111465489 [Cucurbita maxima])

HSP 1 Score: 948 bits (2450), Expect = 0.0
Identity = 493/515 (95.73%), Postives = 502/515 (97.48%), Query Frame = 0


Query: 1   MNLSIRSHHCSPEIRKLVSPKLSSPALTIESSLNSRTYSSSHSIKDEGVKSRDKLPWLAA 60
           MNLS+RSHHCSPEIRK VSPKLSSPALT ESSL SRTYSSSHSIKDEGVKSR+KLPWLAA
Sbjct: 55  MNLSMRSHHCSPEIRKFVSPKLSSPALTAESSLKSRTYSSSHSIKDEGVKSRNKLPWLAA 114

Query: 61  TNSFEKARWLDKSTTKKRGDRSSWKESNSGSEKMRSSWDYSKKTIGKRGNRPSGDEQEKR 120
           TNSFEKA+WLDKSTTKKRGDRSSWKESNSGSEKMRSSWDYSKKT GKRGNRPSGDE EKR
Sbjct: 115 TNSFEKAKWLDKSTTKKRGDRSSWKESNSGSEKMRSSWDYSKKTFGKRGNRPSGDEPEKR 174

Query: 121 YGKAPVGSAYRSSWEVSAEKLATQRMEYAEERRESRRGRVDNEEQRSRDVEVEDEETEAI 180
           YGKAPVGSAYRSSWEVSAEK  TQ MEYA+ERRESRRGRVDNEEQR+RDVEVEDEETEAI
Sbjct: 175 YGKAPVGSAYRSSWEVSAEKFGTQGMEYADERRESRRGRVDNEEQRNRDVEVEDEETEAI 234

Query: 181 ADPRWDKIKSKFERPEFQRWNKQESLSRKTWKEASESTLPKMVGEGVYGVGPVLAALSAG 240
           ADPRWDKIKSKFER EFQRWNKQES SRKTWKEASESTLPKMVGEGVYGVGPVLAALSAG
Sbjct: 235 ADPRWDKIKSKFERHEFQRWNKQESWSRKTWKEASESTLPKMVGEGVYGVGPVLAALSAG 294

Query: 241 RREFYALYMQEGLDLNNNNKKKKDKKGFEKVLRLAERNALTVKEISKHDLNMLSDNRPHQ 300
           RREFYALYMQEGLDLNNNNKKKKDKKGFEKVLRLAERNALTVKEISKHDLNMLSDNRPHQ
Sbjct: 295 RREFYALYMQEGLDLNNNNKKKKDKKGFEKVLRLAERNALTVKEISKHDLNMLSDNRPHQ 354

Query: 301 GLVLDASPLEMVKIMELDPVSLEEDKGSLWLALDEVTDPQNLGAIIRSAYFFGASGVVLC 360
           GLVLDASPLEMVKIMELDPVSLEEDKGSLWLALDEVTDPQNLGAIIRSAYFFGASGVVLC
Sbjct: 355 GLVLDASPLEMVKIMELDPVSLEEDKGSLWLALDEVTDPQNLGAIIRSAYFFGASGVVLC 414

Query: 361 AKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRVLGASVSSKSIDLEEVP 420
           AKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRVLGASVSSKSIDLEEVP
Sbjct: 415 AKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRVLGASVSSKSIDLEEVP 474

Query: 421 PGAPTILVLGSEGTGLRPLVERSCSQLVKIPGNIPVDIAMDKDNDIETTQPTKESSVDEF 480
           PGAPTILVLGSEGTGLRPLVERSCSQLVKIPGNIPVD+A+D+DNDIETTQPTKESSVDEF
Sbjct: 475 PGAPTILVLGSEGTGLRPLVERSCSQLVKIPGNIPVDVAIDRDNDIETTQPTKESSVDEF 534

Query: 481 RSFMAVESLNVSVAAGVLVHHLIGSNYKNESYEPS 515
           RSFMAVESLNV VAAGVLVHHLIGS+YK ESYE S
Sbjct: 535 RSFMAVESLNVGVAAGVLVHHLIGSSYKKESYETS 569

[Close]

BLAST of Cp4.1LG07g10540.1 vs. NCBI nr
Match: XP_022937862.1 (rRNA methyltransferase 1, mitochondrial [Cucurbita moschata])

HSP 1 Score: 920 bits (2377), Expect = 0.0
Identity = 487/515 (94.56%), Postives = 491/515 (95.34%), Query Frame = 0


Query: 1   MNLSIRSHHCSPEIRKLVSPKLSSPALTIESSLNSRTYSSSHSIKDEGVKSRDKLPWLAA 60
           M+LSIRS HCSPEIRKLVS KLS PALTIESSL SRTYSSSHSIKDEGVKSRDKLPWLAA
Sbjct: 55  MSLSIRSQHCSPEIRKLVSRKLSLPALTIESSLKSRTYSSSHSIKDEGVKSRDKLPWLAA 114

Query: 61  TNSFEKARWLDKSTTKKRGDRSSWKESNSGSEKMRSSWDYSKKTIGKRGNRPSGDEQEKR 120
           TNSFEKARW DKSTTKKRGDRSSWKESNSGSEK         KT GKRGNR SGDE EKR
Sbjct: 115 TNSFEKARWSDKSTTKKRGDRSSWKESNSGSEK---------KTFGKRGNRASGDEPEKR 174

Query: 121 YGKAPVGSAYRSSWEVSAEKLATQRMEYAEERRESRRGRVDNEEQRSRDVEVEDEETEAI 180
           YGKAPVGS YRSSWEVSAEK ATQRMEYAEERRESRRGRVDNEEQR+RDVEVEDEETEAI
Sbjct: 175 YGKAPVGSTYRSSWEVSAEKFATQRMEYAEERRESRRGRVDNEEQRNRDVEVEDEETEAI 234

Query: 181 ADPRWDKIKSKFERPEFQRWNKQESLSRKTWKEASESTLPKMVGEGVYGVGPVLAALSAG 240
           ADPRWDKIK+KFERPEFQRWNKQES SRKTWKEASESTLPKMVGEGVYGVGPVLAALSAG
Sbjct: 235 ADPRWDKIKTKFERPEFQRWNKQESWSRKTWKEASESTLPKMVGEGVYGVGPVLAALSAG 294

Query: 241 RREFYALYMQEGLDLNNNNKKKKDKKGFEKVLRLAERNALTVKEISKHDLNMLSDNRPHQ 300
           RREFYALYMQEGLDLNNNNKKKKDKKGFEKVLRLAERNALTVKEISKHDLNMLSDNRPHQ
Sbjct: 295 RREFYALYMQEGLDLNNNNKKKKDKKGFEKVLRLAERNALTVKEISKHDLNMLSDNRPHQ 354

Query: 301 GLVLDASPLEMVKIMELDPVSLEEDKGSLWLALDEVTDPQNLGAIIRSAYFFGASGVVLC 360
           GLVLDASPLEMVKIMELDPVSLEEDKG LWLALDEVTDPQNLGAIIRSAYFFGASGVVLC
Sbjct: 355 GLVLDASPLEMVKIMELDPVSLEEDKGLLWLALDEVTDPQNLGAIIRSAYFFGASGVVLC 414

Query: 361 AKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRVLGASVSSKSIDLEEVP 420
           AKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRVLGASVSSKSIDLEEVP
Sbjct: 415 AKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRVLGASVSSKSIDLEEVP 474

Query: 421 PGAPTILVLGSEGTGLRPLVERSCSQLVKIPGNIPVDIAMDKDNDIETTQPTKESSVDEF 480
           PGAPTILVLGSEGTGLRPLVERSCSQLVKIPGNIPVDIA DK+ND ETTQPTKESSVDEF
Sbjct: 475 PGAPTILVLGSEGTGLRPLVERSCSQLVKIPGNIPVDIATDKENDNETTQPTKESSVDEF 534

Query: 481 RSFMAVESLNVSVAAGVLVHHLIGSNYKNESYEPS 515
           RSFMAVESLNVSVAAGVLVHHLIGSNYKNESYE S
Sbjct: 535 RSFMAVESLNVSVAAGVLVHHLIGSNYKNESYETS 560

[Close]

BLAST of Cp4.1LG07g10540.1 vs. ExPASy TrEMBL
Match: A0A6J1HPM2 (uncharacterized protein LOC111465489 OS=Cucurbita maxima OX=3661 GN=LOC111465489 PE=4 SV=1)

HSP 1 Score: 948 bits (2450), Expect = 0.0
Identity = 493/515 (95.73%), Postives = 502/515 (97.48%), Query Frame = 0


Query: 1   MNLSIRSHHCSPEIRKLVSPKLSSPALTIESSLNSRTYSSSHSIKDEGVKSRDKLPWLAA 60
           MNLS+RSHHCSPEIRK VSPKLSSPALT ESSL SRTYSSSHSIKDEGVKSR+KLPWLAA
Sbjct: 55  MNLSMRSHHCSPEIRKFVSPKLSSPALTAESSLKSRTYSSSHSIKDEGVKSRNKLPWLAA 114

Query: 61  TNSFEKARWLDKSTTKKRGDRSSWKESNSGSEKMRSSWDYSKKTIGKRGNRPSGDEQEKR 120
           TNSFEKA+WLDKSTTKKRGDRSSWKESNSGSEKMRSSWDYSKKT GKRGNRPSGDE EKR
Sbjct: 115 TNSFEKAKWLDKSTTKKRGDRSSWKESNSGSEKMRSSWDYSKKTFGKRGNRPSGDEPEKR 174

Query: 121 YGKAPVGSAYRSSWEVSAEKLATQRMEYAEERRESRRGRVDNEEQRSRDVEVEDEETEAI 180
           YGKAPVGSAYRSSWEVSAEK  TQ MEYA+ERRESRRGRVDNEEQR+RDVEVEDEETEAI
Sbjct: 175 YGKAPVGSAYRSSWEVSAEKFGTQGMEYADERRESRRGRVDNEEQRNRDVEVEDEETEAI 234

Query: 181 ADPRWDKIKSKFERPEFQRWNKQESLSRKTWKEASESTLPKMVGEGVYGVGPVLAALSAG 240
           ADPRWDKIKSKFER EFQRWNKQES SRKTWKEASESTLPKMVGEGVYGVGPVLAALSAG
Sbjct: 235 ADPRWDKIKSKFERHEFQRWNKQESWSRKTWKEASESTLPKMVGEGVYGVGPVLAALSAG 294

Query: 241 RREFYALYMQEGLDLNNNNKKKKDKKGFEKVLRLAERNALTVKEISKHDLNMLSDNRPHQ 300
           RREFYALYMQEGLDLNNNNKKKKDKKGFEKVLRLAERNALTVKEISKHDLNMLSDNRPHQ
Sbjct: 295 RREFYALYMQEGLDLNNNNKKKKDKKGFEKVLRLAERNALTVKEISKHDLNMLSDNRPHQ 354

Query: 301 GLVLDASPLEMVKIMELDPVSLEEDKGSLWLALDEVTDPQNLGAIIRSAYFFGASGVVLC 360
           GLVLDASPLEMVKIMELDPVSLEEDKGSLWLALDEVTDPQNLGAIIRSAYFFGASGVVLC
Sbjct: 355 GLVLDASPLEMVKIMELDPVSLEEDKGSLWLALDEVTDPQNLGAIIRSAYFFGASGVVLC 414

Query: 361 AKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRVLGASVSSKSIDLEEVP 420
           AKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRVLGASVSSKSIDLEEVP
Sbjct: 415 AKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRVLGASVSSKSIDLEEVP 474

Query: 421 PGAPTILVLGSEGTGLRPLVERSCSQLVKIPGNIPVDIAMDKDNDIETTQPTKESSVDEF 480
           PGAPTILVLGSEGTGLRPLVERSCSQLVKIPGNIPVD+A+D+DNDIETTQPTKESSVDEF
Sbjct: 475 PGAPTILVLGSEGTGLRPLVERSCSQLVKIPGNIPVDVAIDRDNDIETTQPTKESSVDEF 534

Query: 481 RSFMAVESLNVSVAAGVLVHHLIGSNYKNESYEPS 515
           RSFMAVESLNV VAAGVLVHHLIGS+YK ESYE S
Sbjct: 535 RSFMAVESLNVGVAAGVLVHHLIGSSYKKESYETS 569

[Close]

BLAST of Cp4.1LG07g10540.1 vs. ExPASy TrEMBL
Match: A0A6J1FCE1 (rRNA methyltransferase 1, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111444126 PE=4 SV=1)

HSP 1 Score: 920 bits (2377), Expect = 0.0
Identity = 487/515 (94.56%), Postives = 491/515 (95.34%), Query Frame = 0


Query: 1   MNLSIRSHHCSPEIRKLVSPKLSSPALTIESSLNSRTYSSSHSIKDEGVKSRDKLPWLAA 60
           M+LSIRS HCSPEIRKLVS KLS PALTIESSL SRTYSSSHSIKDEGVKSRDKLPWLAA
Sbjct: 55  MSLSIRSQHCSPEIRKLVSRKLSLPALTIESSLKSRTYSSSHSIKDEGVKSRDKLPWLAA 114

Query: 61  TNSFEKARWLDKSTTKKRGDRSSWKESNSGSEKMRSSWDYSKKTIGKRGNRPSGDEQEKR 120
           TNSFEKARW DKSTTKKRGDRSSWKESNSGSEK         KT GKRGNR SGDE EKR
Sbjct: 115 TNSFEKARWSDKSTTKKRGDRSSWKESNSGSEK---------KTFGKRGNRASGDEPEKR 174

Query: 121 YGKAPVGSAYRSSWEVSAEKLATQRMEYAEERRESRRGRVDNEEQRSRDVEVEDEETEAI 180
           YGKAPVGS YRSSWEVSAEK ATQRMEYAEERRESRRGRVDNEEQR+RDVEVEDEETEAI
Sbjct: 175 YGKAPVGSTYRSSWEVSAEKFATQRMEYAEERRESRRGRVDNEEQRNRDVEVEDEETEAI 234

Query: 181 ADPRWDKIKSKFERPEFQRWNKQESLSRKTWKEASESTLPKMVGEGVYGVGPVLAALSAG 240
           ADPRWDKIK+KFERPEFQRWNKQES SRKTWKEASESTLPKMVGEGVYGVGPVLAALSAG
Sbjct: 235 ADPRWDKIKTKFERPEFQRWNKQESWSRKTWKEASESTLPKMVGEGVYGVGPVLAALSAG 294

Query: 241 RREFYALYMQEGLDLNNNNKKKKDKKGFEKVLRLAERNALTVKEISKHDLNMLSDNRPHQ 300
           RREFYALYMQEGLDLNNNNKKKKDKKGFEKVLRLAERNALTVKEISKHDLNMLSDNRPHQ
Sbjct: 295 RREFYALYMQEGLDLNNNNKKKKDKKGFEKVLRLAERNALTVKEISKHDLNMLSDNRPHQ 354

Query: 301 GLVLDASPLEMVKIMELDPVSLEEDKGSLWLALDEVTDPQNLGAIIRSAYFFGASGVVLC 360
           GLVLDASPLEMVKIMELDPVSLEEDKG LWLALDEVTDPQNLGAIIRSAYFFGASGVVLC
Sbjct: 355 GLVLDASPLEMVKIMELDPVSLEEDKGLLWLALDEVTDPQNLGAIIRSAYFFGASGVVLC 414

Query: 361 AKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRVLGASVSSKSIDLEEVP 420
           AKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRVLGASVSSKSIDLEEVP
Sbjct: 415 AKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRVLGASVSSKSIDLEEVP 474

Query: 421 PGAPTILVLGSEGTGLRPLVERSCSQLVKIPGNIPVDIAMDKDNDIETTQPTKESSVDEF 480
           PGAPTILVLGSEGTGLRPLVERSCSQLVKIPGNIPVDIA DK+ND ETTQPTKESSVDEF
Sbjct: 475 PGAPTILVLGSEGTGLRPLVERSCSQLVKIPGNIPVDIATDKENDNETTQPTKESSVDEF 534

Query: 481 RSFMAVESLNVSVAAGVLVHHLIGSNYKNESYEPS 515
           RSFMAVESLNVSVAAGVLVHHLIGSNYKNESYE S
Sbjct: 535 RSFMAVESLNVSVAAGVLVHHLIGSNYKNESYETS 560

[Close]

BLAST of Cp4.1LG07g10540.1 vs. ExPASy TrEMBL
Match: A0A0A0LW97 (SpoU_sub_bind domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G574920 PE=4 SV=1)

HSP 1 Score: 776 bits (2003), Expect = 9.73e-279
Identity = 419/539 (77.74%), Postives = 457/539 (84.79%), Query Frame = 0


Query: 1   MNLSIRSHHCSPEIRKLVSPKLSSPALTIESSLNS------RTYSSSHSIKDEGVKSRDK 60
           + LSIR  HC PEIR LVSP+L+S  L++ SSL S      R +SSS+ +KDEGV S +K
Sbjct: 5   VKLSIRGRHCFPEIRDLVSPQLNSLPLSVGSSLRSVSLNKSRCFSSSYRLKDEGVLSGNK 64

Query: 61  LPWLAATNSFEKARWLDKSTTKKRGDRSSWKESNSGSEKMRSSWDYSKKTIGKRGNRPSG 120
           LPWLAA +S EKA+WLDKSTTKKRGDRS WKES           D+  K  GK GNR S 
Sbjct: 65  LPWLAAASSVEKAKWLDKSTTKKRGDRSPWKES-----------DFKSKRFGKNGNRSSR 124

Query: 121 DEQEKRYGKAPVGSAYRSSWEVSAEKLATQRMEYAEERRESRRGRVDNEEQRSRDVE--- 180
           DE EKRYGK P+GSA RS+WEVSAEK A + +E A+E+RESRR R+DNEEQ+  D+E   
Sbjct: 125 DEPEKRYGKEPIGSANRSTWEVSAEKFARRSIELADEKRESRRTRMDNEEQKDDDIERRG 184

Query: 181 ----VEDEETEAIADPRWDKIKSKF----------ERPEFQRWNKQESLSRKTWKEASES 240
               VEDEETEAIADPRWDKIKS+F          ERPEFQRWNKQES  RKTWKEASES
Sbjct: 185 SYEEVEDEETEAIADPRWDKIKSRFRGMVDERGATERPEFQRWNKQESWGRKTWKEASES 244

Query: 241 TLPKMVGEGVYGVGPVLAALSAGRREFYALYMQEGLDLNNNNKKKKDKKGFEKVLRLAER 300
           TLPKM+GEGVYGVGPVLAALSAGRREFYALY+QEG+DLNNNNKKKKDKKGFEKVL+LAE+
Sbjct: 245 TLPKMIGEGVYGVGPVLAALSAGRREFYALYVQEGIDLNNNNKKKKDKKGFEKVLKLAEK 304

Query: 301 NALTVKEISKHDLNMLSDNRPHQGLVLDASPLEMVKIMELDPVSLEEDKGSLWLALDEVT 360
           NALT+KEISKHDLNM+SDNRPHQGLVLDASPLEMVKI ELDPVSLE+DKGSLWLALDEVT
Sbjct: 305 NALTIKEISKHDLNMISDNRPHQGLVLDASPLEMVKIKELDPVSLEDDKGSLWLALDEVT 364

Query: 361 DPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSS 420
           DPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSS
Sbjct: 365 DPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSS 424

Query: 421 AENGWRVLGASVSSKSIDLEEVPPGAPTILVLGSEGTGLRPLVERSCSQLVKIPGNIPVD 480
           AENGWRVLGASVSSKSIDL+EV PGAPTILVLGSEGTGLRPLVERSCSQLV+IPGNIPVD
Sbjct: 425 AENGWRVLGASVSSKSIDLKEVLPGAPTILVLGSEGTGLRPLVERSCSQLVRIPGNIPVD 484

Query: 481 IAMDKDNDIETTQPTKESSVDEFRSFMAVESLNVSVAAGVLVHHLIGSNYKNESYEPSI 516
           + +D +NDIETT      SVDEFRSFMAVESLNVSVAAGV VHHL+G++YKNES E SI
Sbjct: 485 VTIDTENDIETTDGR---SVDEFRSFMAVESLNVSVAAGVFVHHLVGNSYKNESLETSI 529

[Close]

BLAST of Cp4.1LG07g10540.1 vs. ExPASy TrEMBL
Match: A0A5D3CIS9 (Putative tRNA/rRNA methyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002930 PE=4 SV=1)

HSP 1 Score: 763 bits (1969), Expect = 1.30e-273
Identity = 416/536 (77.61%), Postives = 451/536 (84.14%), Query Frame = 0


Query: 1   MNLSIRSHHCSPEIRKLVSPKLSSPALTIESSLNS------RTYSSSHSIKDEGVKSRDK 60
           + LSIR  HC PEIR LVSP+L+S  L++ SSL S      R +SSS+ +KDEGV S +K
Sbjct: 5   VKLSIRGRHCFPEIRDLVSPQLNSLPLSVGSSLKSLSLNKSRCFSSSYRLKDEGVLSGNK 64

Query: 61  LPWLAATNSFEKARWLDKSTTKKRGDRSSWKESNSGSEKMRSSWDYSKKTIGKRGNRPSG 120
           LPWLAA NS EKA+WLDKSTTKKRGDRSSWKES           D+  K  GK GNR S 
Sbjct: 65  LPWLAAANSVEKAKWLDKSTTKKRGDRSSWKES-----------DFKSKRFGKNGNRSSR 124

Query: 121 DEQEKRYGKAPVGSAYRSSWEVSAEKLATQRMEYAEERRESRRGRVDNEEQRSRDVEV-- 180
           DE EKRYGK P+GSA RS+WEVSAEK A + +E A+ERRE RR R+DNEEQ + D+E   
Sbjct: 125 DEPEKRYGKEPIGSANRSTWEVSAEKFARRGIESADERRE-RRTRMDNEEQENDDIERRG 184

Query: 181 -----EDEETEAIADPRWDKIKSKF----------ERPEFQRWNKQESLSRKTWKEASES 240
                EDEE EAIADPRWDKIKS+F          ERP+FQRWNKQES  RKTWKEASES
Sbjct: 185 NYEEGEDEEIEAIADPRWDKIKSRFRGMVDERGATERPQFQRWNKQESWGRKTWKEASES 244

Query: 241 TLPKMVGEGVYGVGPVLAALSAGRREFYALYMQEGLDLNNNNKKKKDKKGFEKVLRLAER 300
           TLPKM+GEGVYGVGPVLAALSAGRREFYALYMQEG+DLNNNNKKKKDKKGFEKVL+LAE+
Sbjct: 245 TLPKMIGEGVYGVGPVLAALSAGRREFYALYMQEGIDLNNNNKKKKDKKGFEKVLKLAEK 304

Query: 301 NALTVKEISKHDLNMLSDNRPHQGLVLDASPLEMVKIMELDPVSLEEDKGSLWLALDEVT 360
           NALT+KEISKHDLNM+SDNRPHQGLVLD SPLEMVKI ELDPVSLE+DKGSLWLALDEVT
Sbjct: 305 NALTIKEISKHDLNMISDNRPHQGLVLDTSPLEMVKIKELDPVSLEDDKGSLWLALDEVT 364

Query: 361 DPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSS 420
           DPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSS
Sbjct: 365 DPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSS 424

Query: 421 AENGWRVLGASVSSKSIDLEEVPPGAPTILVLGSEGTGLRPLVERSCSQLVKIPGNIPVD 480
           A NGWRVLGASVSSKSIDLEEV PGAPTILVLGSEGTGLRPLVERSCSQLV+IPGNIP +
Sbjct: 425 AGNGWRVLGASVSSKSIDLEEVLPGAPTILVLGSEGTGLRPLVERSCSQLVRIPGNIPAN 484

Query: 481 IAMDKDNDIETTQPTKESSVDEFRSFMAVESLNVSVAAGVLVHHLIGSNYKNESYE 513
           + +DK+NDIETT      SVDEFRSFMAVESLNVSVAAGV VHHLIG++YKNES E
Sbjct: 485 VTIDKENDIETTDGC---SVDEFRSFMAVESLNVSVAAGVFVHHLIGNSYKNESLE 525

[Close]

BLAST of Cp4.1LG07g10540.1 vs. ExPASy TrEMBL
Match: A0A1S3BQ13 (uncharacterized tRNA/rRNA methyltransferase MSMEG_6073/MSMEI_5913 OS=Cucumis melo OX=3656 GN=LOC103492262 PE=4 SV=1)

HSP 1 Score: 763 bits (1969), Expect = 1.30e-273
Identity = 416/536 (77.61%), Postives = 451/536 (84.14%), Query Frame = 0


Query: 1   MNLSIRSHHCSPEIRKLVSPKLSSPALTIESSLNS------RTYSSSHSIKDEGVKSRDK 60
           + LSIR  HC PEIR LVSP+L+S  L++ SSL S      R +SSS+ +KDEGV S +K
Sbjct: 5   VKLSIRGRHCFPEIRDLVSPQLNSLPLSVGSSLKSLSLNKSRCFSSSYRLKDEGVLSGNK 64

Query: 61  LPWLAATNSFEKARWLDKSTTKKRGDRSSWKESNSGSEKMRSSWDYSKKTIGKRGNRPSG 120
           LPWLAA NS EKA+WLDKSTTKKRGDRSSWKES           D+  K  GK GNR S 
Sbjct: 65  LPWLAAANSVEKAKWLDKSTTKKRGDRSSWKES-----------DFKSKRFGKNGNRSSR 124

Query: 121 DEQEKRYGKAPVGSAYRSSWEVSAEKLATQRMEYAEERRESRRGRVDNEEQRSRDVEV-- 180
           DE EKRYGK P+GSA RS+WEVSAEK A + +E A+ERRE RR R+DNEEQ + D+E   
Sbjct: 125 DEPEKRYGKEPIGSANRSTWEVSAEKFARRGIESADERRE-RRTRMDNEEQENDDIERRG 184

Query: 181 -----EDEETEAIADPRWDKIKSKF----------ERPEFQRWNKQESLSRKTWKEASES 240
                EDEE EAIADPRWDKIKS+F          ERP+FQRWNKQES  RKTWKEASES
Sbjct: 185 NYEEGEDEEIEAIADPRWDKIKSRFRGMVDERGATERPQFQRWNKQESWGRKTWKEASES 244

Query: 241 TLPKMVGEGVYGVGPVLAALSAGRREFYALYMQEGLDLNNNNKKKKDKKGFEKVLRLAER 300
           TLPKM+GEGVYGVGPVLAALSAGRREFYALYMQEG+DLNNNNKKKKDKKGFEKVL+LAE+
Sbjct: 245 TLPKMIGEGVYGVGPVLAALSAGRREFYALYMQEGIDLNNNNKKKKDKKGFEKVLKLAEK 304

Query: 301 NALTVKEISKHDLNMLSDNRPHQGLVLDASPLEMVKIMELDPVSLEEDKGSLWLALDEVT 360
           NALT+KEISKHDLNM+SDNRPHQGLVLD SPLEMVKI ELDPVSLE+DKGSLWLALDEVT
Sbjct: 305 NALTIKEISKHDLNMISDNRPHQGLVLDTSPLEMVKIKELDPVSLEDDKGSLWLALDEVT 364

Query: 361 DPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSS 420
           DPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSS
Sbjct: 365 DPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSS 424

Query: 421 AENGWRVLGASVSSKSIDLEEVPPGAPTILVLGSEGTGLRPLVERSCSQLVKIPGNIPVD 480
           A NGWRVLGASVSSKSIDLEEV PGAPTILVLGSEGTGLRPLVERSCSQLV+IPGNIP +
Sbjct: 425 AGNGWRVLGASVSSKSIDLEEVLPGAPTILVLGSEGTGLRPLVERSCSQLVRIPGNIPAN 484

Query: 481 IAMDKDNDIETTQPTKESSVDEFRSFMAVESLNVSVAAGVLVHHLIGSNYKNESYE 513
           + +DK+NDIETT      SVDEFRSFMAVESLNVSVAAGV VHHLIG++YKNES E
Sbjct: 485 VTIDKENDIETTDGC---SVDEFRSFMAVESLNVSVAAGVFVHHLIGNSYKNESLE 525

[Close]

BLAST of Cp4.1LG07g10540.1 vs. TAIR 10
Match: AT2G19870.1 (tRNA/rRNA methyltransferase (SpoU) family protein )

HSP 1 Score: 447.2 bits (1149), Expect = 1.8e-125
Identity = 280/541 (51.76%), Postives = 363/541 (67.10%), Query Frame = 0


Query: 11  SPEIRKLVSPKLSSPALTIESSLNSRTYSSSHSIKDEGVKS---RDKLPWLAATNSFEKA 70
           S +IR L +P+      + +S    +  SS+ S    G+ S   RDK    +  +S +  
Sbjct: 63  SMKIRMLRNPEGVREFSSFDSQRFGKRSSSNSSRGKSGLGSKAYRDKRSGGSGRSSGDSI 122

Query: 71  RWLDKSTTK------KRGDRSSWKE----SNSGSEKMRSSWDYSK-----KTIGKRGNRP 130
            W+ KS  K      +RGDR SW++    ++SGS++   S  Y +        G+R +R 
Sbjct: 123 -WV-KSDEKPVEERFQRGDRPSWEKRDGRNDSGSDRRSRSRGYGETRNRDSFRGRRDDRI 182

Query: 131 SGDEQEKRYGKAPVGSAYRSSWEVSAEKLATQRMEYAEERRESRRGRVDNEEQRS----- 190
           S  E+E + G         S W  + +K A ++       R S   R  N+   S     
Sbjct: 183 SEVEEESKKGGG------NSIWVANDDKPAKEQSPRV-NNRSSWDDRTRNQNSFSARGDD 242

Query: 191 RDVEVEDEET-------------EAIADPRWDKIKSKFERPE----------FQRWNKQE 250
           R  E  +EET             E   + RW +IK++F R +          ++ WN+QE
Sbjct: 243 RITEEAEEETMNHAPEDGDGIVEEEPDNTRWSEIKNRFNRYDVRDQGRDDAAYRNWNRQE 302

Query: 251 SLSRKTWKEASESTLPKMVGEGVYGVGPVLAALSAGRREFYALYMQEGLDLNNNNKKKKD 310
           S  RKTW+EA+ES++P++ GE VYGV PVLAALS GRREFYALY+QEGLDL++NN+KKKD
Sbjct: 303 SWGRKTWQEATESSVPRLEGEVVYGVSPVLAALSVGRREFYALYVQEGLDLSSNNRKKKD 362

Query: 311 KKGFEKVLRLAERNALTVKEISKHDLNMLSDNRPHQGLVLDASPLEMVKIMELDPVSLEE 370
           KKGFE+VL+++E+  L +KE SKHDLNM++DNRPHQGLVLDASPLE+VK+ ELDP+S EE
Sbjct: 363 KKGFERVLKISEKLGLNIKETSKHDLNMVADNRPHQGLVLDASPLELVKVKELDPISSEE 422

Query: 371 DKGSLWLALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELMEL 430
           +K SLW+ALDEVTDPQNLGAIIRSAYFFGA+GVV+CAKNSAPLS VVSKASAGSLE+MEL
Sbjct: 423 EKYSLWVALDEVTDPQNLGAIIRSAYFFGATGVVVCAKNSAPLSAVVSKASAGSLEVMEL 482

Query: 431 RYCKNMMQFLTSSAENGWRVLGASVSSKSIDLEEVPPGAPTILVLGSEGTGLRPLVERSC 490
           RYCKNMMQFL +SAENGWRV+G SVS K++ L EV PG+PTILVLG+EGTGLRPLVERSC
Sbjct: 483 RYCKNMMQFLEASAENGWRVVGGSVSPKAVALNEVLPGSPTILVLGNEGTGLRPLVERSC 542

Query: 491 SQLVKIPGNIPVDIAMDKDNDIETTQPTKESSVDEFRSFMAVESLNVSVAAGVLVHHLIG 506
           + LV+I GN+P ++A+ + +D E          + FRSF+AVESLNVSVAAG+ +HHLIG
Sbjct: 543 TDLVRISGNMPNEVAVTESDDAEG---------EGFRSFLAVESLNVSVAAGLFLHHLIG 585

[Close]

BLAST of Cp4.1LG07g10540.1 vs. TAIR 10
Match: AT4G38020.1 (tRNA/rRNA methyltransferase (SpoU) family protein )

HSP 1 Score: 48.1 bits (113), Expect = 2.4e-05
Identity = 51/185 (27.57%), Postives = 71/185 (38.38%), Query Frame = 0


Query: 331 LALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGS------------ 390
           L LD + DP NLG ++RSA  F   G  L      P +    +AS G+            
Sbjct: 199 LVLDSIQDPGNLGTLVRSAMAFNWDGAFLLPGCCDPYNDKALRASRGASFQLPIVSGNWN 258

Query: 391 -LELMELRYCKNMMQFLTSSAENGWRVLGASVSSKSIDLEEVPPGAPTILVLGSEGTGLR 450
            L+L+E  +    M+ L        + L   VS  S++  +     P  L+LGSEG GL 
Sbjct: 259 HLKLLENEF---QMKLLAGHPATTTQKL-KPVSKLSVEFAQSLAEKPLCLILGSEGNGLS 318

Query: 451 PLVERSCSQLVKIPGNIPVDIAMDKDNDIETTQPTKESSVDEFRSFMAVESLNVSVAAGV 503
               + C         + V I M  D                       ESLNVSVA G+
Sbjct: 319 EQARKVC---------VLVSIPMAGD----------------------FESLNVSVAGGI 348

[Close]

BLAST of Cp4.1LG07g10540.1 vs. TAIR 10
Match: AT5G15390.1 (tRNA/rRNA methyltransferase (SpoU) family protein )

HSP 1 Score: 46.2 bits (108), Expect = 9.2e-05
Identity = 38/182 (20.88%), Postives = 77/182 (42.31%), Query Frame = 0


Query: 322 LEEDKGSLWLALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLEL 381
           +E    S+ L ++ ++D  N+ A  RSA   G   V + + +S+         S G+ + 
Sbjct: 148 VENRSYSVCLVVEGLSDFGNISAAFRSADALGIQSVHVVSCDSSKRYNGNRHVSMGAEKW 207

Query: 382 MELRYCKNMMQFLTSSAENGWRVLGASVSSKSIDLEEVPPGAPTILVLGSEGTGLRPLVE 441
           +++ +     +        G+R+    +   ++ + ++    PT +V+G+EG G    + 
Sbjct: 208 LDIEFWDTPKECFKVLKSRGYRIATTHLGMDTVSIYDMDWSCPTAIVVGNEGRG----IS 267

Query: 442 RSCSQLVKIPGNIPVDIAMDKDNDIETTQPTKESSVDEFRSFMAVESLNVSVAAGVLVHH 501
               +L  +  +IP++                            V+S NVSVAAG+L+HH
Sbjct: 268 DEALELSDLRCSIPMN--------------------------GMVDSFNVSVAAGILMHH 299

Query: 502 LI 504
            +
Sbjct: 328 AV 299

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g10540.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q76NT0	8.3e-35	32.99	rRNA methyltransferase 1, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=...	[more]
O94631	2.5e-31	34.03	rRNA methyltransferase 1, mitochondrial OS=Schizosaccharomyces pombe (strain 972...	[more]
Q6IN84	1.6e-30	32.88	rRNA methyltransferase 1, mitochondrial OS=Homo sapiens OX=9606 GN=MRM1 PE=1 SV=...	[more]
Q99J25	4.7e-30	34.25	rRNA methyltransferase 1, mitochondrial OS=Mus musculus OX=10090 GN=Mrm1 PE=2 SV...	[more]
A4T5L0	3.9e-24	32.00	Uncharacterized tRNA/rRNA methyltransferase Mflv_1447 OS=Mycolicibacterium gilvu...	[more]

BLAST of Cp4.1LG07g10540.1 vs. NCBI nr


Match Name	Identity	Description
XP_023536668.1	100.00	rRNA methyltransferase 1, mitochondrial [Cucurbita pepo subsp. pepo]	[more]
KAG7021321.1	97.48	rRNA methyltransferase 1, mitochondrial, partial [Cucurbita argyrosperma subsp. ...	[more]
KAG6586465.1	97.28	rRNA methyltransferase 1, mitochondrial, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_022965658.1	95.73	uncharacterized protein LOC111465489 [Cucurbita maxima]	[more]
XP_022937862.1	94.56	rRNA methyltransferase 1, mitochondrial [Cucurbita moschata]	[more]

BLAST of Cp4.1LG07g10540.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HPM2	0.0	95.73	uncharacterized protein LOC111465489 OS=Cucurbita maxima OX=3661 GN=LOC111465489...	[more]
A0A6J1FCE1	0.0	94.56	rRNA methyltransferase 1, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A0A0LW97	9.73e-279	77.74	SpoU_sub_bind domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G5749...	[more]
A0A5D3CIS9	1.30e-273	77.61	Putative tRNA/rRNA methyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3BQ13	1.30e-273	77.61	uncharacterized tRNA/rRNA methyltransferase MSMEG_6073/MSMEI_5913 OS=Cucumis mel...	[more]

BLAST of Cp4.1LG07g10540.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G19870.1	1.8e-125	51.76	tRNA/rRNA methyltransferase (SpoU) family protein	[more]
AT4G38020.1	2.4e-05	27.57	tRNA/rRNA methyltransferase (SpoU) family protein	[more]
AT5G15390.1	9.2e-05	20.88	tRNA/rRNA methyltransferase (SpoU) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013123	RNA 2-O ribose methyltransferase, substrate binding	SMART	SM00967	SpoU_sub_bind_2	coord: 226..312 e-value: 6.1E-8 score: 42.4
IPR013123	RNA 2-O ribose methyltransferase, substrate binding	PFAM	PF08032	SpoU_sub_bind	coord: 227..310 e-value: 3.1E-13 score: 49.8
IPR004441	RNA methyltransferase TrmH family	TIGRFAM	TIGR00186	TIGR00186	coord: 256..501 e-value: 5.5E-50 score: 168.0
IPR029064	50S ribosomal protein L30e-like	GENE3D	3.30.1330.30		coord: 220..308 e-value: 5.8E-17 score: 63.7
IPR029064	50S ribosomal protein L30e-like	SUPERFAMILY	55315	L30e-like	coord: 226..309
IPR001537	tRNA/rRNA methyltransferase, SpoU type	PFAM	PF00588	SpoU_methylase	coord: 330..453 e-value: 7.1E-26 score: 91.1
IPR029026	tRNA (guanine-N1-)-methyltransferase, N-terminal	GENE3D	3.40.1280.10		coord: 314..515 e-value: 3.2E-48 score: 165.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..167
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..122
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..178
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..128
None	No IPR available	PANTHER	PTHR46103	RRNA METHYLTRANSFERASE 1, MITOCHONDRIAL	coord: 47..512
None	No IPR available	CDD	cd18105	SpoU-like_MRM1	coord: 329..502 e-value: 1.0993E-74 score: 231.253
IPR029028	Alpha/beta knot methyltransferases	SUPERFAMILY	75217	alpha/beta knot	coord: 301..453

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG07g10540	Cp4.1LG07g10540	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG07g10540.1:exon:001	Cp4.1LG07g10540.1:exon:001	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG07g10540.1:cds:001	Cp4.1LG07g10540.1:cds:001	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG07g10540.1	Cp4.1LG07g10540.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006396	RNA processing
biological_process	GO:0001510	RNA methylation
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008173	RNA methyltransferase activity