Cp4.1LG05g15330.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATAAGGAAAAGAAAAAGAAAAAGAATAAGAAAAGGAAGAAATGGAATATCCGTCTTGATCCCAAAGCCTTCTTCCTTCCCGCGCCATCTCTTCCCTATAAAGCCGCAGTTTGAACACTCTCAGTTTCTTTCTGTTCATCTTCATCTTTTTCTTCTTAAGCTGTAATGAAATTTGTAGAGCAGAGCTTGAAGCAACAGTCGGAACAGATATGCAAGACTGTTGAGGTCGACGTAATTGATCACCATCGCACTGCATCGTCGCTGGTCGAATTGGAAGCTTCTGAAGATTGCGAGAGGGATGGACCGGATGGTGACGGCCTCTATATTCCTCCCCTCAACTTTTCCATGGTTGATAATGGCATTTTCCGCTCCGGCTTCCCTAATTCTGCTAACTTCTCCTTCCTCCAAACCCTAGGCCTCCGTTCCATTATGTATGTATTGTTCTGCTTGTTTACGATTGAGTTTCTATGTTTGGATTTTCTGTCTTTATGATGAACGGATTGATGAATTTGCATCGACTTATGGATGTAGATGTCTATGTCCGGAGCCGTATCCGGAACACAACATGGAGTTTCTCAAGTCTAACGGAATCAGATTGTATCAATTTGGAATCGAGAGCTATAAGGTGCGTTTCCGTTCATTTTTGGACTCTCCTTTATTATTAGAATTTCTGATCTCAGTTAACAACTCAACGATAAAAACTGCTATATTTGAATTAGGAAATGACTGCGTTAACTGTAGATGTTCAGCGTTTACATTACAGCACGTAGTTTAAGTTATATGGAATTTCACCAGGGAACGCATGGCGCAATTCGGTATGGAGTTGTTTATCGCATAATTCAGTTTTCCTTTACAATTACGAAGTTCGATTAAGAGTTTGCATCGTTGAGTATCAAATAAGTTTATAAGCTTCCATTAGGGCAGAAGTCTAGATGTCTCGGGCATTGGAGGCTTTTTGAACTTATATTTGTCTCGATCTTCTGCATGATTTTAATATTAAGCTTTAGTCCTCGATTTCTGTGATGAAAAGTATATGTCTAAGGTTAAGTTATGTCTGAAATTTTGTCTAATCATTATGTTTAATATTCACACTGCAAAGCTGTTCTAATTGCGGGAATTGTGCTTACCAAAGAATTGATTTAGAATCAGATTGATGAAAAAAATTCAAAAGAAGCATCAGAAGTCGCTTATGAGAAGTGAAAATTCATTAAGGAAAATTTCAAAGTGGCCACAGTCTCTTTAAGTTGAGATGCAGTCGGGAGAAATGCATTTTGAAATGATGGAACGTGGTTTTAGTTCTTCATCTCTGCATCTTCACCCAAACGTTAAATCTAATCAACGCTAGACCATCGATATAGCTGATGGAGATTGATATTTGGAATTTGAAAATGTTGAATGCTTAGATGCCATGGGTTACCTTTTGAAGATATAAGATTTATGATGAATGACAATAGATTTGAATCGGCAAACTAATTTTCTCAGGCAATAAGAAGATATCGATTTCATCTACTAGCGTTATTAGCTGTATCGTAAGTTCTAGCATATGTTGATTGGTTTGATTACTAACGGTTTCATGTGATCTTAAGCTTGGGAAAATACTGACTGTGTAATGTGTTCTAAATTTAGGAAATTCGAGGATTTTGGTCATCATTTTTCATTTATTTGTGATTTGAACATTTACTTCATTGCATCCTCACTATGCTGTGAGTGAACATCTGTAAGTTCCCGCATCGGTTGGGGAGGAGGTGGATTGTAAGATCCCACATCGGTTGGAGGTGTGGAAGCCTCTTCCTAGCAGACGCATTTTTTAAAAACCTTGAGGGAAAGTCCAAAGAGGACAATATCTGTTAGCGGTGGGCTTGAACTGTTACAACATCATTTTAATCCATCCTATTAGTGCCTCAGTGCTTCAATCTTGATCAAATTGTCATTGTTTATGCCTCAGTTATGGATGCCTGATTTATGATAATGTTGCATCAGCCTGCTTGTGATCTTTTCTGGTTTCTTTAAGTGGTATACTGTGATGCTATATGATTATGTTCCCGTTGAAATGAGAATACGAGTGAAATATGTCTGACTCTGCTGGATTGCACAGAAATACCAATATAGCTTTTGGAGTTAGTTTTCTGTCTTTTATATTGGTATTATTGTTTGGGTTTTCAGGAGCCTTTTGTGAATATCCCAGATGATATGATTCGTGAAGCACTGAAAGTTGTCCTTGGTACTACTGAATATCATCTTAAAAGTGATTGACTAGAGTATTAGTCTGTTAAGATTGTTGTTTCTTAATTAAATTTTCTCAATGCAGACGATAGAAATCATCCAATCCTCATACATTGCAAGAGAGGAAAGGTAGTCACTGTGTTTCCCTCTATGCTTCCACATCCCATGAATCCAAGTTCACTACTCTCTTTACCTAGAAACCCTTCTCTCTGTCCAGCATCGTACAGGTTGCCTTGTGGGATGCCTGAGAAAATTGCAGAGGTGGTGCCTCACTTCTGTGTTTGATGAGTACCAGAGATTTGCAGCTGCAAAAGCAAGAATTTCAGACCAGAGGTTTATGGAATTGTTCGATGTCTCCGACTTGAGGCATCTTCCCATGTCATTCGCATGCTCAAAGAGGTGAAAAATTATTGTACTGAAATGCTTTCTGTTTGTTCTTTGGCAAATGCAGAGGACAGACTTGTGCTGGAGGAATAAAATGAAAAAGACAGTAACTCCTGAAATTCCTCTTAGTAATTTAGAGAATTTTCTTTTCTTTTCTTTTCTTTTCTTACCCTTAGAGTAATGACGCATGTTTACATTTGTACACTTCTAGGTATTCTAAACTCTTGTTCTATATCAGTCTGTTTGTTTTTGTAAAGATTTCTTTGGTGGTTCGGGTGGCATTCATTAGACGACTAGGGAAGCAGCAGAAAACATTCACACACCTCAAAGTCATAGTGAGGTTAATCTAATAGTTGAGGTAAAAGGAATTAAAGTTCTCAAGTTAAGCATATTTTTAACATTCAATCACGGTTTACCATAGGTACTATATTTGACCTTTTATTATAGACAAAGATCTTGTATCTATTTACGGTTCTTTCTATTTCTTTTGTAATTTATTTTATGATTATAAATAGAGAATTTCACGACCATTTAGGTGGGATGGTTTTAACAAATATTCTCATTCATCACCTTCCAAGTTGTTTCTATTAATGGTTGGGAGGGAGTTCTACACTAGCTAATTTAGGGAATGATCATAGGTTTATAAGTAAGGAAATACATCTCCATTGATATAAAGCATTTTGGGGAAGTGCAAGGCAAAACTATGAAAGCTTACGCTCAAAGTAGATAATATCATACCATTGTGGAGATCCATGATTCCTAACCGTTTCTTTCCTTAACTATTATAAAAGGTAAGCCAATTTGCATGTTGAAGAACACTATAATGTAATGTTGAGTTATATTTGGAACAATAAAATGCTAGCTACAATTTTCAGCTGTATGATCATCTCTGGTTCGTTCCAAGACGAAGAAGCAGCTGGAAGTGTCAGTGGAAAAAGCTCGACGACCACTTAACCAAAGGTACACTTTATATACCCACCAACCAATAGTTCCTCTCATCTTGATTTCTTATGGAACTCTTATTGGATCCATTCGTTGCACTGGGAACCGTGTTCTTCATATGAAATGATTATTCTGAACATTATGAATTTCAGTTAAATCTTGATGAATGATTGGAGAGGCATCTCTTAAGTGGATAGTGGCTTAGTTTAGGGCCAATGAGTAGGAATTCCATTAACCATATTGACTGTCTTCATTTTTAGGTTTGATGCCAATGATCACGGGCAATCATTGCATAGTTGGTAGTGTTGATGAGTTGTATTCTACCTTTGCCAATTTATAATGATTACTTACTTCTGCTTGTTTGCCCTTTGCAATATTCGGTCAAAGTCAAGCTTATGTGGTGTAAACTTCACTCAAATTCTATCGACCTGTAATTTTTCTTCATTAAAATAACACTTTCTTGAAACATAGAAACATCCTGTCTTTAAAAAATATTAAGGATTTGTTAGGCCGAAATTCACTTTTGTGATCTTGGAATTTTTTCCTGCCTATATCTTACCAATAAATTGACTT ATAAGGAAAAGAAAAAGAAAAAGAATAAGAAAAGGAAGAAATGGAATATCCGTCTTGATCCCAAAGCCTTCTTCCTTCCCGCGCCATCTCTTCCCTATAAAGCCGCAGTTTGAACACTCTCAGTTTCTTTCTGTTCATCTTCATCTTTTTCTTCTTAAGCTGTAATGAAATTTGTAGAGCAGAGCTTGAAGCAACAGTCGGAACAGATATGCAAGACTGTTGAGGTCGACGTAATTGATCACCATCGCACTGCATCGTCGCTGGTCGAATTGGAAGCTTCTGAAGATTGCGAGAGGGATGGACCGGATGGTGACGGCCTCTATATTCCTCCCCTCAACTTTTCCATGGTTGATAATGGCATTTTCCGCTCCGGCTTCCCTAATTCTGCTAACTTCTCCTTCCTCCAAACCCTAGGCCTCCGTTCCATTATATGTCTATGTCCGGAGCCGTATCCGGAACACAACATGGAGTTTCTCAAGTCTAACGGAATCAGATTGTATCAATTTGGAATCGAGAGCTATAAGGAGCCTTTTGTGAATATCCCAGATGATATGATTCGTGAAGCACTGAAAGTTGTCCTTGACGATAGAAATCATCCAATCCTCATACATTGCAAGAGAGGAAAGCATCGTACAGGTTGCCTTGTGGGATGCCTGAGAAAATTGCAGAGGTGGTGCCTCACTTCTGTGTTTGATGAGTACCAGAGATTTGCAGCTGCAAAAGCAAGAATTTCAGACCAGAGGTTTATGGAATTGTTCGATGTCTCCGACTTGAGGCATCTTCCCATGTCATTCGCATGCTCAAAGAGGTGAAAAATTATTGTACTGAAATGCTTTCTGTTTGTTCTTTGGCAAATGCAGAGGACAGACTTGTGCTGGAGGAATAAAATGAAAAAGACAGTAACTCCTGAAATTCCTCTTAGTAATTTAGAGAATTTTCTTTTCTTTTCTTTTCTTTTCTTACCCTTAGAGTAATGACGCATGTTTACATTTGTACACTTCTAGGTATTCTAAACTCTTGTTCTATATCAGTCTGTTTGTTTTTGTAAAGATTTCTTTGGTGGTTCGGGTGGCATTCATTAGACGACTAGGGAAGCAGCAGAAAACATTCACACACCTCAAAGTCATAGTGAGGTTAATCTAATAGTTGAGCTGTATGATCATCTCTGGTTCGTTCCAAGACGAAGAAGCAGCTGGAAGTGTCAGTGGAAAAAGCTCGACGACCACTTAACCAAAGGTTTGATGCCAATGATCACGGGCAATCATTGCATAGTTGGTAGTGTTGATGAGTTGTATTCTACCTTTGCCAATTTATAATGATTACTTACTTCTGCTTGTTTGCCCTTTGCAATATTCGGTCAAAGTCAAGCTTATGTGGTGTAAACTTCACTCAAATTCTATCGACCTGTAATTTTTCTTCATTAAAATAACACTTTCTTGAAACATAGAAACATCCTGTCTTTAAAAAATATTAAGGATTTGTTAGGCCGAAATTCACTTTTGTGATCTTGGAATTTTTTCCTGCCTATATCTTACCAATAAATTGACTT ATGAAATTTGTAGAGCAGAGCTTGAAGCAACAGTCGGAACAGATATGCAAGACTGTTGAGGTCGACGTAATTGATCACCATCGCACTGCATCGTCGCTGGTCGAATTGGAAGCTTCTGAAGATTGCGAGAGGGATGGACCGGATGGTGACGGCCTCTATATTCCTCCCCTCAACTTTTCCATGGTTGATAATGGCATTTTCCGCTCCGGCTTCCCTAATTCTGCTAACTTCTCCTTCCTCCAAACCCTAGGCCTCCGTTCCATTATATGTCTATGTCCGGAGCCGTATCCGGAACACAACATGGAGTTTCTCAAGTCTAACGGAATCAGATTGTATCAATTTGGAATCGAGAGCTATAAGGAGCCTTTTGTGAATATCCCAGATGATATGATTCGTGAAGCACTGAAAGTTGTCCTTGACGATAGAAATCATCCAATCCTCATACATTGCAAGAGAGGAAAGCATCGTACAGGTTGCCTTGTGGGATGCCTGAGAAAATTGCAGAGGTGGTGCCTCACTTCTGTGTTTGATGAGTACCAGAGATTTGCAGCTGCAAAAGCAAGAATTTCAGACCAGAGGTTTATGGAATTGTTCGATGTCTCCGACTTGAGGCATCTTCCCATGTCATTCGCATGCTCAAAGAGGTGA MKFVEQSLKQQSEQICKTVEVDVIDHHRTASSLVELEASEDCERDGPDGDGLYIPPLNFSMVDNGIFRSGFPNSANFSFLQTLGLRSIICLCPEPYPEHNMEFLKSNGIRLYQFGIESYKEPFVNIPDDMIREALKVVLDDRNHPILIHCKRGKHRTGCLVGCLRKLQRWCLTSVFDEYQRFAAAKARISDQRFMELFDVSDLRHLPMSFACSKR Homology
BLAST of Cp4.1LG05g15330.1 vs. ExPASy Swiss-Prot
Match: Q9ZVN4 (Tyrosine-protein phosphatase DSP1 OS=Arabidopsis thaliana OX=3702 GN=DSP1 PE=1 SV=1) HSP 1 Score: 302.8 bits (774), Expect = 3.2e-81 Identity = 149/219 (68.04%), Postives = 177/219 (80.82%), Query Frame = 0
BLAST of Cp4.1LG05g15330.1 vs. ExPASy Swiss-Prot
Match: Q940L5 (Probable tyrosine-protein phosphatase DSP4 OS=Arabidopsis thaliana OX=3702 GN=DSP4 PE=2 SV=1) HSP 1 Score: 285.8 bits (730), Expect = 4.0e-76 Identity = 127/167 (76.05%), Postives = 150/167 (89.82%), Query Frame = 0
BLAST of Cp4.1LG05g15330.1 vs. ExPASy Swiss-Prot
Match: Q84MD6 (Tyrosine-protein phosphatase DSP2 OS=Arabidopsis thaliana OX=3702 GN=DSP2 PE=1 SV=1) HSP 1 Score: 275.4 bits (703), Expect = 5.5e-73 Identity = 138/241 (57.26%), Postives = 167/241 (69.29%), Query Frame = 0
BLAST of Cp4.1LG05g15330.1 vs. ExPASy Swiss-Prot
Match: Q0DX67 (Probable tyrosine-protein phosphatase DSP2 OS=Oryza sativa subsp. japonica OX=39947 GN=DSP2 PE=2 SV=2) HSP 1 Score: 249.6 bits (636), Expect = 3.2e-65 Identity = 114/162 (70.37%), Postives = 134/162 (82.72%), Query Frame = 0
BLAST of Cp4.1LG05g15330.1 vs. ExPASy Swiss-Prot
Match: Q681Z2 (Tyrosine-protein phosphatase DSP3 OS=Arabidopsis thaliana OX=3702 GN=DSP3 PE=1 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 1.2e-56 Identity = 104/167 (62.28%), Postives = 127/167 (76.05%), Query Frame = 0
BLAST of Cp4.1LG05g15330.1 vs. NCBI nr
Match: XP_023533824.1 (probable tyrosine-protein phosphatase At1g05000 isoform X3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 449 bits (1154), Expect = 3.86e-159 Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g15330.1 vs. NCBI nr
Match: XP_023533820.1 (probable tyrosine-protein phosphatase At1g05000 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023533821.1 probable tyrosine-protein phosphatase At1g05000 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023533823.1 probable tyrosine-protein phosphatase At1g05000 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 447 bits (1149), Expect = 3.58e-158 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g15330.1 vs. NCBI nr
Match: XP_023533817.1 (probable tyrosine-protein phosphatase At1g05000 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023533818.1 probable tyrosine-protein phosphatase At1g05000 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023533819.1 probable tyrosine-protein phosphatase At1g05000 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 447 bits (1149), Expect = 5.33e-158 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0
BLAST of Cp4.1LG05g15330.1 vs. NCBI nr
Match: XP_022947547.1 (probable tyrosine-protein phosphatase At1g05000 isoform X2 [Cucurbita moschata]) HSP 1 Score: 443 bits (1140), Expect = 5.27e-157 Identity = 212/215 (98.60%), Postives = 213/215 (99.07%), Query Frame = 0
BLAST of Cp4.1LG05g15330.1 vs. NCBI nr
Match: XP_022947544.1 (probable tyrosine-protein phosphatase At1g05000 isoform X1 [Cucurbita moschata] >XP_022947545.1 probable tyrosine-protein phosphatase At1g05000 isoform X1 [Cucurbita moschata] >XP_022947546.1 probable tyrosine-protein phosphatase At1g05000 isoform X1 [Cucurbita moschata]) HSP 1 Score: 441 bits (1135), Expect = 4.88e-156 Identity = 211/214 (98.60%), Postives = 212/214 (99.07%), Query Frame = 0
BLAST of Cp4.1LG05g15330.1 vs. ExPASy TrEMBL
Match: A0A6J1G6S0 (probable tyrosine-protein phosphatase At1g05000 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451380 PE=3 SV=1) HSP 1 Score: 443 bits (1140), Expect = 2.55e-157 Identity = 212/215 (98.60%), Postives = 213/215 (99.07%), Query Frame = 0
BLAST of Cp4.1LG05g15330.1 vs. ExPASy TrEMBL
Match: A0A6J1G6R1 (probable tyrosine-protein phosphatase At1g05000 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451380 PE=3 SV=1) HSP 1 Score: 441 bits (1135), Expect = 2.36e-156 Identity = 211/214 (98.60%), Postives = 212/214 (99.07%), Query Frame = 0
BLAST of Cp4.1LG05g15330.1 vs. ExPASy TrEMBL
Match: A0A6J1I3U2 (probable tyrosine-protein phosphatase At1g05000 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111469661 PE=3 SV=1) HSP 1 Score: 437 bits (1125), Expect = 4.94e-155 Identity = 207/215 (96.28%), Postives = 212/215 (98.60%), Query Frame = 0
BLAST of Cp4.1LG05g15330.1 vs. ExPASy TrEMBL
Match: A0A6J1I6M1 (probable tyrosine-protein phosphatase At1g05000 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111469661 PE=3 SV=1) HSP 1 Score: 436 bits (1120), Expect = 3.42e-154 Identity = 206/214 (96.26%), Postives = 211/214 (98.60%), Query Frame = 0
BLAST of Cp4.1LG05g15330.1 vs. ExPASy TrEMBL
Match: A0A6J1I1H8 (probable tyrosine-protein phosphatase At1g05000 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469661 PE=3 SV=1) HSP 1 Score: 436 bits (1120), Expect = 6.80e-154 Identity = 206/214 (96.26%), Postives = 211/214 (98.60%), Query Frame = 0
BLAST of Cp4.1LG05g15330.1 vs. TAIR 10
Match: AT1G05000.1 (Phosphotyrosine protein phosphatases superfamily protein ) HSP 1 Score: 302.8 bits (774), Expect = 2.3e-82 Identity = 149/219 (68.04%), Postives = 177/219 (80.82%), Query Frame = 0
BLAST of Cp4.1LG05g15330.1 vs. TAIR 10
Match: AT1G05000.2 (Phosphotyrosine protein phosphatases superfamily protein ) HSP 1 Score: 286.2 bits (731), Expect = 2.2e-77 Identity = 149/251 (59.36%), Postives = 177/251 (70.52%), Query Frame = 0
BLAST of Cp4.1LG05g15330.1 vs. TAIR 10
Match: AT4G03960.1 (Phosphotyrosine protein phosphatases superfamily protein ) HSP 1 Score: 285.8 bits (730), Expect = 2.9e-77 Identity = 127/167 (76.05%), Postives = 150/167 (89.82%), Query Frame = 0
BLAST of Cp4.1LG05g15330.1 vs. TAIR 10
Match: AT2G32960.1 (Phosphotyrosine protein phosphatases superfamily protein ) HSP 1 Score: 275.4 bits (703), Expect = 3.9e-74 Identity = 138/241 (57.26%), Postives = 167/241 (69.29%), Query Frame = 0
BLAST of Cp4.1LG05g15330.1 vs. TAIR 10
Match: AT3G02800.1 (Tyrosine phosphatase family protein ) HSP 1 Score: 221.1 bits (562), Expect = 8.7e-58 Identity = 104/167 (62.28%), Postives = 127/167 (76.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|