Cp4.1LG04g11460.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g11460.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Protein of Unknown Function (DUF239)
Location	Cp4.1LG04: 8860057 .. 8863724 (-)
Sequence length	803
RNA-Seq Expression	Cp4.1LG04g11460.1
Synteny	Cp4.1LG04g11460.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAGAAGAAAAAGGAAAAAAAGGGTAATTTTTTCCTCTGTTTCTCTTTTTATTTGACGGATTAAATAATGAAAAAGTGGAATGCAATGGCTAAAATTTAATGGGTGTCAGGAAAAAAGATGTGTAGCCCTCTCTTGATGATCATGATCATGTAACGTAATGTAAAATATCCAAAAATCATTCATCTTCCTCTCCCAAATTTGACCATGCAAATCCATTGGTCCTAAATCATCAGTTCCCCATTACGAAATTTGAAAACAAAATGATTTGTACAGCACAATCCGAATCGGAGGGAAAATGACAAGAAAGTGGGGCAGTTTTGTGAGAGAGAAATTCATTGCTTTTTAGAGAGTTGTGCGCGTGTGGGTTTACACCTTTCTTCTTTCTTGGTGGCCGTCCGCCATTGTTGTTCTTGAGCGAGCTTCTTCTTGTTCTTCTGGGTTTGTCTCCATTGGCGGCGCGGTAGAGGAAACTGCTGTGGATTTGTGAGTTTAAGAGGGTTTTTGGAGATGGGTTCTGCTAGGTTTAGCAGATGCAGGACCATGGAAGCTCTGGTCGCCATTTTGTGTGTTCTGGGGCTGGTTTCTCTGTGCTGTGCGGCGAGGATGGAATCTGCTTCCCGCCAGAAGCTTGAGGTCCGAAAACACCTCAGGCGCTTGAACAAGCCGGCTGTTAAAACCATCGAGGTTTGTAATCTGTATTCATTTTGGGTTTGGTTTTAGTGGATCTTGCTCTGTTTTGTTTCTAAAATGCTAGAAAATGGGGTGGAAATGGTTGGATTCCTTTGTTTTCTCGGGAACCAAACAAGGATGAACATGTTCCACTTTCTCCCCTTTTCTACTCTAATGGGGTTTCTGTTTTTTCCGGGAAAATGTTTGGATTCCTTTGTTTTCTCAGGAACCAAACAAGGATGAACATATTCCACTTTCTTCCTGTTTCTACTCAAATGGGGTTTGCTTGTAGTGGCGGTCTGTTTGGTTTCCGGGAAAATGTTTGGATTCCTTTGTTTTCTCGGGAACCAAACAAGGATGAACACATTCCACTTTCTTCCCTTTTCTACTCAAATGGGGTTTCTGTTTTTTTCCGGGAAAATGTTTGGATTCCTTTGTTTTCTCAGGAACCAAACAAGGATGAACATATTCCACTTTCTTCCCTTTTCTTCTCAAATGGGGTTTGCTTGTAATGGCGGTCTGTTTGGTTTCCGGGAAAATGTTTGGATTCCTCTGTTTTCTCGGGAACCAAACAAGGATGAACATATTCCACTTCCTTCCCTTTTCTATTCAAATGGGGTTTCTGTTTGGTTTCCGGGAAAATGTTTGGATTCCTTTGTTTTCTCGGGAGCCAAACAAGGATGAACATGTTCCACTTTCTTCCCTTTTCTACTCGAATGGGGTTTCTGTTTTTTCCGGGAAAATGTTTGGATTCTACTGTTTTCTCACGAACCAAACAAGGAAGAACATATTCCACTTTCTCTTGAAATCTCTGTCTTAACTTTCTTAGGAGTCAAACACCATACAATGTTGTTCTTATGTTTGTTCTATTGGTTGAACCAGAGCCCAGATGGGGACCTAATTGACTGTGTTCATATGTCTCATCAACCTGCATTTGACCATCCTTTCCTTAAAGACCACAAAATCCAGGTTTGTTCTTGTTTCATCAGTTCATTACCATATTTTTCTCTCATTTTCTCTTCGATCCACAAGTTTTTGTTCATCTTGGTTCTATATGTTCTATCAGACGAGGCCAACTTTTCATCCAGAATGGCTAGACGAGAGCAAAGTAGCTGAGAAAGCCAATGAAAAACCGAATCCAATTAAGCAACTATGGCATGTTAATGGAAAGTGTCCTGAAGGTACCATCCCCATTAGAAGAACCAAACATGAGGATGTTTTGAGAGCAAGTTCAGTGAAGAGATATGGAAGAAAAAAGCACAGATCAGCCCCAATACCCCCTAGATCTGCTGAGCCTGATCTCATCAACCAAAGTGGCCATCAGGTAATCATCCATTTCTCCGCTTTTTTTGTAACCGCCCAAGCCTACCGCGAGCTGATATTGTCTTCTTTTGGCTTTCCCTTTCGAGCTTCCCCTCAAGATTTTTAAAACGCGTGTGCTAGAGAGATGTTTTCACTCCTCCTCTCCAACCGATATGGGTTTTCACAATCCTCCCCCTTTTGGGGCCCAGCTTCCTCGTGCACTCGTTCCCTTCTCTAACCCTCCAATCCACCCCCTTCGAGACTCAGCCTCCTCGCTGACACGTTGCCGGTGTCTGGCTCTGATACCATTTGTAACAGCCCAAGTCCATCACTAGTAGATATTGTCCTCTTCGGACTTTTTCCCTTCCGGGCTTCCCCTCAAAGTTTTTAAAATGCTTCTGCTAGTGAAAGGTTTTCACACCTTGTTTCGTTTTCCTCCCCAACCTATGTAGGATCTCACAATCCACCCCCCTTCGAGGTCCAATGTCCTCGTTGGCACTCGTTCCCTTCGACAATCGATGTGGGATCCTCCAATCCACCCCCCTTCGAGGTCCAATGTCCTCGTTGGCACTCGTTCCCTTCAACAATCGATGTGGGATCCTCCTTCCGGTGTCTTGCTTTGATACCATTTATAACAGCCCAAGCTCACTGCTAGCACATAGTCCTTTTTGGGCTTTTCCTTCTAGGTTTCCCCTCAAGGTTTTTAAAACGCGTCCACTAGGGAGAAGTTTTCACACCCTAAAGAATGTTTTGTTCTCCTCCCCAACCGATATGGGATCTCACACTGTTCACTTACATGTAATCCTTTTCCGCTCTGATTTTCTTTTTGGGCTTGTTTAGCATGCCATAGCTTATGTAGAAGGAGACAAGTATTATGGAGCTAAAGCCACTATGAACGTGTGGGAGCCCAGCATTCAACAGCCAAATGAGTTTAGCTTATCACAGCTTTGGATATTGGGAGGCTCTTTTGGTGAAGATCTTAACAGCATTGAAGCTGGTTGGCAGGTTTCATCCTTTTCATTATCTTCATGAACTTTATAAACCAGAAAGTGTCATAACTTCTTGTTCTTCCACAAACAGGTCAGTCCAAATCTCTACGGCGACAACAACACAAGACTCTTTACATACTGGACGGTGAGCCCGACCATACATTCGATCGTTATCGTTTCTTTTGCTCAAGTTAGCGAGGCGTTTTTGTAATAATCTTTCTTCTCAATGTTTGCTTTAGAGTGATGCATATCAAGCTACAGGGTGTTACAACCTCCTCTGCTCGGGCTTTATTCAAATCAACAGCGATATCGCAATGGGAGCAAGCATTTCTCCGGTCTCAGCGTTTCGAAATTCGCAATACGATATCAGTATACTAGTCTGGAAGGTAACAGCCAAAAACAGGCCTTTATAGTTTTTGAATTAGCATGAGAGTTTCTGAAACAAGGAGAAAAATCCAATGTCCATGAAAATGATAGTACCGATGATAGATAAGCATGTGGGGGCATCAGTTTATGGTTGTTGTCCCAACCCAGCTGATATCTATACACATTTCAAATTCTTTGGCCATATCAATAGTTACCTTACAACAATAAATGAGACACTAATGAGGCGAAAAACAAGTGGCATTGCTATGTTCTTATGCTGCTAAGAATCTTTTGGCCTTAACCATGACAGGTTGGCCGAAGTAAAAAAGGGGACGATTAA

mRNA sequence

CAAAGAAGAAAAAGGAAAAAAAGGGTAATTTTTTCCTCTGTTTCTCTTTTTATTTGACGGATTAAATAATGAAAAAGTGGAATGCAATGGCTAAAATTTAATGGGTGTCAGGAAAAAAGATGTGTAGCCCTCTCTTGATGATCATGATCATGTAACGTAATGTAAAATATCCAAAAATCATTCATCTTCCTCTCCCAAATTTGACCATGCAAATCCATTGGTCCTAAATCATCAGTTCCCCATTACGAAATTTGAAAACAAAATGATTTGTACAGCACAATCCGAATCGGAGGGAAAATGACAAGAAAGTGGGGCAGTTTTGTGAGAGAGAAATTCATTGCTTTTTAGAGAGTTGTGCGCGTGTGGGTTTACACCTTTCTTCTTTCTTGGTGGCCGTCCGCCATTGTTGTTCTTGAGCGAGCTTCTTCTTGTTCTTCTGGGTTTGTCTCCATTGGCGGCGCGGTAGAGGAAACTGCTGTGGATTTGTGAGTTTAAGAGGGTTTTTGGAGATGGGTTCTGCTAGGTTTAGCAGATGCAGGACCATGGAAGCTCTGGTCGCCATTTTGTGTGTTCTGGGGCTGGTTTCTCTGTGCTGTGCGGCGAGGATGGAATCTGCTTCCCGCCAGAAGCTTGAGGTCCGAAAACACCTCAGGCGCTTGAACAAGCCGGCTGTTAAAACCATCGAGAGCCCAGATGGGGACCTAATTGACTGTGTTCATATGTCTCATCAACCTGCATTTGACCATCCTTTCCTTAAAGACCACAAAATCCAGGTTGGCCGAAGTAAAAAAGGGGACGATTAA

Coding sequence (CDS)

ATGGGTTCTGCTAGGTTTAGCAGATGCAGGACCATGGAAGCTCTGGTCGCCATTTTGTGTGTTCTGGGGCTGGTTTCTCTGTGCTGTGCGGCGAGGATGGAATCTGCTTCCCGCCAGAAGCTTGAGGTCCGAAAACACCTCAGGCGCTTGAACAAGCCGGCTGTTAAAACCATCGAGAGCCCAGATGGGGACCTAATTGACTGTGTTCATATGTCTCATCAACCTGCATTTGACCATCCTTTCCTTAAAGACCACAAAATCCAGGTTGGCCGAAGTAAAAAAGGGGACGATTAA

Protein sequence

MGSARFSRCRTMEALVAILCVLGLVSLCCAARMESASRQKLEVRKHLRRLNKPAVKTIESPDGDLIDCVHMSHQPAFDHPFLKDHKIQVGRSKKGDD

Homology

[Close]

BLAST of Cp4.1LG04g11460.1 vs. NCBI nr
Match: XP_023529873.1 (uncharacterized protein LOC111792593 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 180 bits (456), Expect = 1.01e-52
Identity = 88/89 (98.88%), Postives = 88/89 (98.88%), Query Frame = 0


Query: 1  MGSARFSRCRTMEALVAILCVLGLVSLCCAARMESASRQKLEVRKHLRRLNKPAVKTIES 60
          MGSARFSRCRTMEALVAILCVLGLVSLCCAARMESASRQKLEVRKHLRRLNKPAVKTIES
Sbjct: 1  MGSARFSRCRTMEALVAILCVLGLVSLCCAARMESASRQKLEVRKHLRRLNKPAVKTIES 60

Query: 61 PDGDLIDCVHMSHQPAFDHPFLKDHKIQV 89
          PDGDLIDCVHMSHQPAFDHPFLKDHKIQ 
Sbjct: 61 PDGDLIDCVHMSHQPAFDHPFLKDHKIQT 89

[Close]

BLAST of Cp4.1LG04g11460.1 vs. NCBI nr
Match: KAG6588126.1 (hypothetical protein SDJN03_16691, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 177 bits (449), Expect = 1.11e-51
Identity = 86/89 (96.63%), Postives = 87/89 (97.75%), Query Frame = 0


Query: 1  MGSARFSRCRTMEALVAILCVLGLVSLCCAARMESASRQKLEVRKHLRRLNKPAVKTIES 60
          MGSARFSRCRTMEALVAI CVLGLVS+CCAARMESASRQKLEVRKHLRRLNKPAVKTIES
Sbjct: 1  MGSARFSRCRTMEALVAIFCVLGLVSVCCAARMESASRQKLEVRKHLRRLNKPAVKTIES 60

Query: 61 PDGDLIDCVHMSHQPAFDHPFLKDHKIQV 89
          PDGDLIDCVHMSHQPAFDHPFLKDHKIQ 
Sbjct: 61 PDGDLIDCVHMSHQPAFDHPFLKDHKIQT 89

[Close]

BLAST of Cp4.1LG04g11460.1 vs. NCBI nr
Match: XP_022967490.1 (uncharacterized protein LOC111466987 [Cucurbita maxima])

HSP 1 Score: 177 bits (449), Expect = 1.11e-51
Identity = 86/89 (96.63%), Postives = 87/89 (97.75%), Query Frame = 0


Query: 1  MGSARFSRCRTMEALVAILCVLGLVSLCCAARMESASRQKLEVRKHLRRLNKPAVKTIES 60
          MGSARFSRCRTMEALVAI CVLGLVS+CCAARMESASRQKLEVRKHLRRLNKPAVKTIES
Sbjct: 1  MGSARFSRCRTMEALVAIFCVLGLVSVCCAARMESASRQKLEVRKHLRRLNKPAVKTIES 60

Query: 61 PDGDLIDCVHMSHQPAFDHPFLKDHKIQV 89
          PDGDLIDCVHMSHQPAFDHPFLKDHKIQ 
Sbjct: 61 PDGDLIDCVHMSHQPAFDHPFLKDHKIQT 89

[Close]

BLAST of Cp4.1LG04g11460.1 vs. NCBI nr
Match: XP_022933659.1 (uncharacterized protein LOC111441013 [Cucurbita moschata])

HSP 1 Score: 174 bits (442), Expect = 1.22e-50
Identity = 85/89 (95.51%), Postives = 86/89 (96.63%), Query Frame = 0


Query: 1  MGSARFSRCRTMEALVAILCVLGLVSLCCAARMESASRQKLEVRKHLRRLNKPAVKTIES 60
          MGSARFSRCRTM ALVAI CVLGLVS+CCAARMESASRQKLEVRKHLRRLNKPAVKTIES
Sbjct: 1  MGSARFSRCRTMVALVAIFCVLGLVSVCCAARMESASRQKLEVRKHLRRLNKPAVKTIES 60

Query: 61 PDGDLIDCVHMSHQPAFDHPFLKDHKIQV 89
          PDGDLIDCVHMSHQPAFDHPFLKDHKIQ 
Sbjct: 61 PDGDLIDCVHMSHQPAFDHPFLKDHKIQT 89

[Close]

BLAST of Cp4.1LG04g11460.1 vs. NCBI nr
Match: KAG7022007.1 (hypothetical protein SDJN02_15736 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 174 bits (441), Expect = 1.72e-50
Identity = 85/89 (95.51%), Postives = 86/89 (96.63%), Query Frame = 0


Query: 1  MGSARFSRCRTMEALVAILCVLGLVSLCCAARMESASRQKLEVRKHLRRLNKPAVKTIES 60
          MGSARFSRCRTMEALVAI CVLGLVS+CCAARMESASRQKLEVRKHLRRLNKPAVKTIES
Sbjct: 1  MGSARFSRCRTMEALVAIFCVLGLVSVCCAARMESASRQKLEVRKHLRRLNKPAVKTIES 60

Query: 61 PDGDLIDCVHMSHQPAFDHPFLKDHKIQV 89
          PDGDLIDCVHMS QPAFDHPFLKDHKIQ 
Sbjct: 61 PDGDLIDCVHMSRQPAFDHPFLKDHKIQT 89

[Close]

BLAST of Cp4.1LG04g11460.1 vs. ExPASy TrEMBL
Match: A0A6J1HUM5 (uncharacterized protein LOC111466987 OS=Cucurbita maxima OX=3661 GN=LOC111466987 PE=4 SV=1)

HSP 1 Score: 177 bits (449), Expect = 5.38e-52
Identity = 86/89 (96.63%), Postives = 87/89 (97.75%), Query Frame = 0


Query: 1  MGSARFSRCRTMEALVAILCVLGLVSLCCAARMESASRQKLEVRKHLRRLNKPAVKTIES 60
          MGSARFSRCRTMEALVAI CVLGLVS+CCAARMESASRQKLEVRKHLRRLNKPAVKTIES
Sbjct: 1  MGSARFSRCRTMEALVAIFCVLGLVSVCCAARMESASRQKLEVRKHLRRLNKPAVKTIES 60

Query: 61 PDGDLIDCVHMSHQPAFDHPFLKDHKIQV 89
          PDGDLIDCVHMSHQPAFDHPFLKDHKIQ 
Sbjct: 61 PDGDLIDCVHMSHQPAFDHPFLKDHKIQT 89

[Close]

BLAST of Cp4.1LG04g11460.1 vs. ExPASy TrEMBL
Match: A0A6J1F0D3 (uncharacterized protein LOC111441013 OS=Cucurbita moschata OX=3662 GN=LOC111441013 PE=4 SV=1)

HSP 1 Score: 174 bits (442), Expect = 5.93e-51
Identity = 85/89 (95.51%), Postives = 86/89 (96.63%), Query Frame = 0


Query: 1  MGSARFSRCRTMEALVAILCVLGLVSLCCAARMESASRQKLEVRKHLRRLNKPAVKTIES 60
          MGSARFSRCRTM ALVAI CVLGLVS+CCAARMESASRQKLEVRKHLRRLNKPAVKTIES
Sbjct: 1  MGSARFSRCRTMVALVAIFCVLGLVSVCCAARMESASRQKLEVRKHLRRLNKPAVKTIES 60

Query: 61 PDGDLIDCVHMSHQPAFDHPFLKDHKIQV 89
          PDGDLIDCVHMSHQPAFDHPFLKDHKIQ 
Sbjct: 61 PDGDLIDCVHMSHQPAFDHPFLKDHKIQT 89

[Close]

BLAST of Cp4.1LG04g11460.1 vs. ExPASy TrEMBL
Match: A0A6J1D1Y4 (uncharacterized protein LOC111016541 OS=Momordica charantia OX=3673 GN=LOC111016541 PE=4 SV=1)

HSP 1 Score: 166 bits (421), Expect = 7.98e-48
Identity = 79/89 (88.76%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1  MGSARFSRCRTMEALVAILCVLGLVSLCCAARMESASRQKLEVRKHLRRLNKPAVKTIES 60
          MGSARFSRCRTMEA+VA+LCVLGL+SLC A R+E  SRQKLEV+KHLRRLNKPAVKTIES
Sbjct: 1  MGSARFSRCRTMEAIVAVLCVLGLISLCSATRLEPDSRQKLEVQKHLRRLNKPAVKTIES 60

Query: 61 PDGDLIDCVHMSHQPAFDHPFLKDHKIQV 89
          PDGDLIDCVHMSHQPAFDHPFLKDHKIQ+
Sbjct: 61 PDGDLIDCVHMSHQPAFDHPFLKDHKIQM 89

[Close]

BLAST of Cp4.1LG04g11460.1 vs. ExPASy TrEMBL
Match: A0A6J1JKQ9 (uncharacterized protein LOC111485466 OS=Cucurbita maxima OX=3661 GN=LOC111485466 PE=4 SV=1)

HSP 1 Score: 166 bits (419), Expect = 1.45e-47
Identity = 80/89 (89.89%), Postives = 86/89 (96.63%), Query Frame = 0


Query: 1  MGSARFSRCRTMEALVAILCVLGLVSLCCAARMESASRQKLEVRKHLRRLNKPAVKTIES 60
          MGSARFSR RTMEALVAI CVLG++SLCC+AR+ESASRQKLEV+KHLRRLNKPAVKTIES
Sbjct: 1  MGSARFSRRRTMEALVAIFCVLGMISLCCSARIESASRQKLEVQKHLRRLNKPAVKTIES 60

Query: 61 PDGDLIDCVHMSHQPAFDHPFLKDHKIQV 89
          PDGDLIDCVHMS+QPAFDHPFLKDHKIQ 
Sbjct: 61 PDGDLIDCVHMSNQPAFDHPFLKDHKIQT 89

[Close]

BLAST of Cp4.1LG04g11460.1 vs. ExPASy TrEMBL
Match: A0A1S3BQI8 (uncharacterized protein LOC103492421 OS=Cucumis melo OX=3656 GN=LOC103492421 PE=4 SV=1)

HSP 1 Score: 165 bits (418), Expect = 2.22e-47
Identity = 79/89 (88.76%), Postives = 83/89 (93.26%), Query Frame = 0


Query: 1  MGSARFSRCRTMEALVAILCVLGLVSLCCAARMESASRQKLEVRKHLRRLNKPAVKTIES 60
          MGSARFSRCRTMEALV I  VLG+VSLCC  R+ES SRQKLEV+KHLRRLNKPAVKTIES
Sbjct: 1  MGSARFSRCRTMEALVVIFSVLGIVSLCCGTRLESGSRQKLEVQKHLRRLNKPAVKTIES 60

Query: 61 PDGDLIDCVHMSHQPAFDHPFLKDHKIQV 89
          PDGDLIDCVHMSHQPAFDHPFLKDHKIQ+
Sbjct: 61 PDGDLIDCVHMSHQPAFDHPFLKDHKIQM 89

[Close]

BLAST of Cp4.1LG04g11460.1 vs. TAIR 10
Match: AT5G56530.1 (Protein of Unknown Function (DUF239) )

HSP 1 Score: 119.8 bits (299), Expect = 1.2e-27
Identity = 59/92 (64.13%), Postives = 69/92 (75.00%), Query Frame = 0


Query: 1  MGSARFSRCRTMEALVAILCVLGLVSLCCAARMESASRQKLEVRKHLRRLNKPAVKTIES 60
          M +A FS+ R     +   C  GL+SL CA R+ S SRQ  EV KHL RLNKPAVK+I+S
Sbjct: 1  MAAAHFSKERVFRGFLVWFCFWGLMSLTCAGRL-SVSRQNFEVHKHLNRLNKPAVKSIQS 60

Query: 61 PDGDLIDCVHMSHQPAFDHPFLKDHKIQVGRS 93
          PDGD+IDCVH+S QPAFDHPFLKDHKIQ+G S
Sbjct: 61 PDGDIIDCVHISKQPAFDHPFLKDHKIQMGPS 91

[Close]

BLAST of Cp4.1LG04g11460.1 vs. TAIR 10
Match: AT5G56530.2 (Protein of Unknown Function (DUF239) )

HSP 1 Score: 119.8 bits (299), Expect = 1.2e-27
Identity = 59/92 (64.13%), Postives = 69/92 (75.00%), Query Frame = 0


Query: 1  MGSARFSRCRTMEALVAILCVLGLVSLCCAARMESASRQKLEVRKHLRRLNKPAVKTIES 60
          M +A FS+ R     +   C  GL+SL CA R+ S SRQ  EV KHL RLNKPAVK+I+S
Sbjct: 1  MAAAHFSKERVFRGFLVWFCFWGLMSLTCAGRL-SVSRQNFEVHKHLNRLNKPAVKSIQS 60

Query: 61 PDGDLIDCVHMSHQPAFDHPFLKDHKIQVGRS 93
          PDGD+IDCVH+S QPAFDHPFLKDHKIQ+G S
Sbjct: 61 PDGDIIDCVHISKQPAFDHPFLKDHKIQMGPS 91

[Close]

BLAST of Cp4.1LG04g11460.1 vs. TAIR 10
Match: AT3G13510.1 (Protein of Unknown Function (DUF239) )

HSP 1 Score: 106.3 bits (264), Expect = 1.4e-23
Identity = 52/89 (58.43%), Postives = 65/89 (73.03%), Query Frame = 0


Query: 1  MGSARFSRCRTMEALVAILCVLGLVSLCCAARMESASRQKLEVRKHLRRLNKPAVKTIES 60
          MG+  FS  +        +C+  ++SL CAA    +SRQK EV+KHL RLNKP VKTI+S
Sbjct: 1  MGAEHFSLVKFNRGF--FVCLWVMLSLSCAAASYGSSRQKFEVKKHLNRLNKPPVKTIQS 60

Query: 61 PDGDLIDCVHMSHQPAFDHPFLKDHKIQV 90
          PDGD+IDC+ +S QPAFDHPFLKDHKIQ+
Sbjct: 61 PDGDIIDCIPISKQPAFDHPFLKDHKIQM 87

[Close]

BLAST of Cp4.1LG04g11460.1 vs. TAIR 10
Match: AT1G55360.1 (Protein of Unknown Function (DUF239) )

HSP 1 Score: 101.3 bits (251), Expect = 4.5e-22
Identity = 51/88 (57.95%), Postives = 61/88 (69.32%), Query Frame = 0


Query: 2  GSARFSRCRTMEALVAILCVLGLVSLCCAARMESASRQKLEVRKHLRRLNKPAVKTIESP 61
          G    S  +     +  LC+ G  SL  AAR    S+QK EV+KHL RLNKPAVK+I+S 
Sbjct: 3  GVVHLSTAKLARGFLVCLCLWGFFSLSYAAR-SGVSKQKFEVKKHLNRLNKPAVKSIQSS 62

Query: 62 DGDLIDCVHMSHQPAFDHPFLKDHKIQV 90
          DGD+IDCV +S QPAFDHPFLKDHKIQ+
Sbjct: 63 DGDVIDCVPISKQPAFDHPFLKDHKIQM 89

[Close]

BLAST of Cp4.1LG04g11460.1 vs. TAIR 10
Match: AT2G44240.1 (Protein of Unknown Function (DUF239) )

HSP 1 Score: 75.5 bits (184), Expect = 2.7e-14
Identity = 36/71 (50.70%), Postives = 52/71 (73.24%), Query Frame = 0


Query: 19 LCVLGLVSLCCAARMESASRQKLEVRKHLRRLNKPAVKTIESPDGDLIDCVHMSHQPAFD 78
          L V  L+   CA   E    ++++V++ L++LNKPA+K+I+S DGD+IDCV ++ QPAFD
Sbjct: 11 LMVTSLLIATCADGKEFFHHREIKVQRFLKQLNKPALKSIKSEDGDIIDCVLITSQPAFD 70

Query: 79 HPFLKDHKIQV 90
          HP LK+H IQV
Sbjct: 71 HPLLKNHTIQV 81

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g11460.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG04g11460.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023529873.1	1.01e-52	98.88	uncharacterized protein LOC111792593 [Cucurbita pepo subsp. pepo]	[more]
KAG6588126.1	1.11e-51	96.63	hypothetical protein SDJN03_16691, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022967490.1	1.11e-51	96.63	uncharacterized protein LOC111466987 [Cucurbita maxima]	[more]
XP_022933659.1	1.22e-50	95.51	uncharacterized protein LOC111441013 [Cucurbita moschata]	[more]
KAG7022007.1	1.72e-50	95.51	hypothetical protein SDJN02_15736 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Cp4.1LG04g11460.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HUM5	5.38e-52	96.63	uncharacterized protein LOC111466987 OS=Cucurbita maxima OX=3661 GN=LOC111466987...	[more]
A0A6J1F0D3	5.93e-51	95.51	uncharacterized protein LOC111441013 OS=Cucurbita moschata OX=3662 GN=LOC1114410...	[more]
A0A6J1D1Y4	7.98e-48	88.76	uncharacterized protein LOC111016541 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A6J1JKQ9	1.45e-47	89.89	uncharacterized protein LOC111485466 OS=Cucurbita maxima OX=3661 GN=LOC111485466...	[more]
A0A1S3BQI8	2.22e-47	88.76	uncharacterized protein LOC103492421 OS=Cucumis melo OX=3656 GN=LOC103492421 PE=...	[more]

BLAST of Cp4.1LG04g11460.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56530.1	1.2e-27	64.13	Protein of Unknown Function (DUF239)	[more]
AT5G56530.2	1.2e-27	64.13	Protein of Unknown Function (DUF239)	[more]
AT3G13510.1	1.4e-23	58.43	Protein of Unknown Function (DUF239)	[more]
AT1G55360.1	4.5e-22	57.95	Protein of Unknown Function (DUF239)	[more]
AT2G44240.1	2.7e-14	50.70	Protein of Unknown Function (DUF239)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025521	Neprosin activation peptide	PFAM	PF14365	Neprosin_AP	coord: 57..90 e-value: 3.4E-15 score: 56.6
None	No IPR available	PANTHER	PTHR31589	PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED	coord: 8..94
None	No IPR available	PANTHER	PTHR31589:SF126	SIMILARITY TO CARBOXYL-TERMINAL PROTEINASE	coord: 8..94

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG04g11460	Cp4.1LG04g11460	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG04g11460.1:exon:003	Cp4.1LG04g11460.1:exon:003	exon
Cp4.1LG04g11460.1:exon:002	Cp4.1LG04g11460.1:exon:002	exon
Cp4.1LG04g11460.1:exon:001	Cp4.1LG04g11460.1:exon:001	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG04g11460.1:cds:003	Cp4.1LG04g11460.1:cds:003	CDS
Cp4.1LG04g11460.1:cds:002	Cp4.1LG04g11460.1:cds:002	CDS
Cp4.1LG04g11460.1:cds:001	Cp4.1LG04g11460.1:cds:001	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG04g11460.1:five_prime_utr:001	Cp4.1LG04g11460.1:five_prime_utr:001	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG04g11460.1	Cp4.1LG04g11460.1-protein	polypeptide