Cp4.1LG04g08950.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG04g08950.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Pentatricopeptide repeat-containing protein
Location	Cp4.1LG04: 10309461 .. 10316888 (-)
Sequence length	4940
RNA-Seq Expression	Cp4.1LG04g08950.1
Synteny	Cp4.1LG04g08950.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTGATGATGAACAAATTACCACCTCCTTCAACACAACTTCACACGTTCAATTTAACCCATCAAAGGTGATCCAAATCTTAGAAAGTCTTCGAAGGGAACCCAACAGTGCCTTTTCCTTTTTCCATAAATTGGAGGAACGGGGCTTTCGTCATAACATCTCTACTTATGCAGCTCTCATTAGGATATTGTGCTCTTGGGGTTTGGAGAGAAAGCTTGACTCTCTGTTCTTGAATCTTATTGGCTCCGAGAAAACAGAATTTGATATTTTAGATTTGCTCGAATCACTTAATCAAGGATATGTGATGGATGGCTCATTCATTCGAGCATACGATGCGTTGATCAAGGCTTATGTTAGTGTTAGCTTATTCGATAGTGCTGTGGACTTACTTTTTCGATCAGAAAGGAAGGGATTTGTTCCACATATTTTTACTTGTAATTTTCTCTTGAACCGCCTTATCGAGCATGGGAAATTGAATATGGCTCTAACTGTGTATAAGCAGTTGAAGAGGTTTGGTTTTCATCCTAATGATTATACTTATGCTATTGTAATAAAAGCACTCTGTAAAATGGGTAATATGGAAGAAGCTATAGATATTTTTGAGGAGATGAGTGAAGCTGGGGTGGTCCCAAATGCCTTTGCTTGTACTGCATATATTGAAGGGTTGTGTACCCACCGTTGTTCAGCTTACGGGTATCAGTTGCTACAAGATTGGAGAGCAGCACAGGCCCCGATAGATGTGTATGCTTACTTTGTAGTAATTCGTGGATTTTGTGAAGAGATGGAAGTAAACAAGGCAGAAAATGTTTTTCTCGATATGGAGAAGTATGGAGTAGTTCCAGATGCACAAACTTATGGAGTGTTGATCAATGGTTATTGCAAGATGTTGAAGTTACAAAAGGCTTTGTCTCTTCACAGTTTCATGTTGTCAAAAGGTATAAAAACAAATTGTGTGATTGTTAGCTCTATTCTTCAATGCTTGATAAGGATGCAAATGTATTCAGAAGTAGTGAACCAATTTAAAGTATTTCAGGATGAGGGAGTGTTTTTCGACAAGGTTGCCTACAATATTGTTGTTCATGCCTTGTGTGAACAAGGGAAATTGGAAGAAGCTATGGAGTTGTTAGAAGATATGACAAGTAGACAGATCCAGATGGATGTTGTTCATTATACAACAATGATTAAAGGTTTTTTTGTCCAAGGAAAAATTTATGAAGCAATGACGATGTTTGAGAATTTGAAGAAAAATGGTATTGAGCCTGACACCATCACTTATANTTGAATATGGCTCTAACTGTGTATAAGCAGTTGAAGAGGTTTGGTTTTCATCCTAATGATTATACTTATGCTATTGTAATAAAAGCACTCTGTAAAATGGGTAATATGGAAGAAGCTATAGATATTTTTGAGGAGATGAGTGAAGCTGGGGTGGTCCCAAATGCCTTTGCTTGTACTGCATATATTGAAGGGTTGTGTACCCACCGTTGTTCAGCTTACGGGTATCAGTTGCTACAAGATTGGAGAGCAGCACAGGCCCCGATAGATGTGTATGCTTACTTTGTAGTAATTCGTGGATTTTGTGAAGAGATGGAAGTAAACAAGGCAGAAAATGTTTTTCTCGATATGGAGAAGTATGGAGTAGTTCCAGATGCACAAACTTATGGAGTGTTGATCAATGGTTATTGCAAGATGTTGAAGTTACAAAAGGCTTTGTCTCTTCACAGTTTCATGTTGTCAAAAGGTATAAAAACAAATTGTGTGATTGTTAGCTCTATTCTTCAATGCTTGATAAGGATGCAAATGTATTCAGAAGTAGTGAACCAATTTAAAGTATTTCAGGATGAGGGAGTGTTTTTCGACAAGGTTGCCTACAATATTGTTGTTCATGCCTTGTGTGAACAAGGGAAATTGGAAGAAGCTATGGAGTTGTTAGAAGATATGACAAGTAGACAGATCCAGATGGATGTTGTTCATTATACAACAATGATTAAAGGTTTTTTTGTCCAAGGAAAAATTTATGAAGCAATGACGATGTTTGAGAATTTGAAGAAAAATGGTATTGAGCCTGACACCATCACTTATAATGTGCTCGCTGCTGGATTATCTAGAAATGGTCTTGTGTCTGAGGTGAAAGACCTTCTAGACTACATGGATGAACATAGTTTGAGAGAAGACCCTAAGATATCCAACCTGATAATTGAAAATTTATGCATAGGAGGCAAAGTGAAAGAAGCGACTGAAATTTTCAATAGTTTAGAAGTAAAGACNGGCGACTGAGATTTTCAATAGTTTAGAAGTAAAGACTGTAGATAGCTATTCTGCCATGATTAATGGGTATTGTGCAGCCAACCGTAGTAAAGATGCATATGAACTTTTTGTTAATTTGTCCAAGAAAGGAGTTCTTTTAAAAAAAAGCTCCCTCTTTAGGCTAGTTAGTAGCCTTTGCATGGATGATTCTAACGACAGAGCTATTAAGGTGATTAAAAGACTTTCAATTATCAACGTGGAGGCTAATGAAATTGTGTACAATAAAGTCATAGCTTCTCTTTGTCGAGCTGGAAATATGAAGATGGCCCAATGTTTATTTGATTGTTTAATTTGTGCTGGGTTAACTCCTGATCTCAAGACTTACACAACGATGATAAATGGTTATTGCAAGATTAATTTTTTGAGGGAAGCTTATGAACTTCTGTGTGATATGAAGATTCGAGGGAGGAAACCTGATATTTTCATCTATACAGTTTTGCTTGATGGTCAATTTAAAACCAGATTACGAGGGCTTTGCTCCTCAGTAGATTTAAGGGGAGCGAAGCAAGAAACGGCTTTTACTTCCACAATTTTTGATGAAATGGAGGACATGAAGATTACTCCAGACGTTATTTGCTACACTGTATTGATTGATGGGTATTGTAAAATGAACAATCTTAATGATGCTATTGTCCTCCTTGAGAAAATGGTTGATCAAGGAATAATGCCTGATACAGTGACATATACCACCCTAGTGTCTGGCTTTTGTAGAAGTGGGGATGTAGAGAAGGCTGTAACTCTATTTGATGATATGTTATCTAAGGGAGTTCTACCTGACGCATTTTTCATCTCTGTTGTCTCACGGTATTCTAAAATCCAAGAAAATGCAATTTAGAACACAAGCACGTTGCTGGATAACAGTGAATAGCATTGGTCTTTGAATTTTTCCAATTAAGTATAATGGTTAGTCCTTATACATCATGTTATCCCTTTTCTTTTCTTTTCTTTTGCTTGCTGCCTGCCTTAGCTTCTCTCCTTCTTTCGAGTCATACAAGTGCCTTATACTTTGACGGTCCTGGATTCTCCAGAGCTGAAATCTACTTGAGCTATATGAAAGCCCTCTACTTTGACCTAAAGATGGCGTAGTCAATTGTGGGAAATTGCTGCAATAATGGGCTTAGATATTAAACTCTACCATATCAAGGTTTTTACTTTGTTATTTTTCTTTTGACTCATGACTCATTAATTGCATACAATTTCTTTAAAATTACTTTTTTTATAGGCCCAAACTCAAATACTATTGAGCAAGTTCAGCAGTTTATTTTGAAGCAATATATTTGAAGGGACATATTTGAAGGCGAGTTAAACTTGTCGAGGATATCGATTATGGGGTTTTTGTCCATCTTTTTATGGTTGCTTAGTATTCTGACCATAATTGAGCATCACTTAAGAGTTAAATTTATTGAACTTATTGAACGAAGTAATGAGATTGAACTTATTGCTTTGATTTGCTTTGCAGTTTCTGTGAATGAAAGTAGTGTTTGATTCTGTAGAATTATATGAAGATGTGAGAGATGCTATCCGAAGCTGTAAGTTCCAAATATTGTCTGTTCCCATTTCCCAGACCTGTTAATGTTTGCAACCTAACAGTTCAATCGATCCTTATCTCTGACTTTGATTCTTTAATACATCAGAATGATTTGAAGTAGACAATGGCAATAGATGTAGATAACTACGAAATAGTGAATTCAAACGACTCAAAAAGTGAAATCTTTTACTCTAGCATGTGGGGACGAACTATAGAATTTTTACATTTTTCTGCTACCAATTGAATGCTTAAACCCTTATAACTTGCTTTATAAATCCCAGAGTGCTTTTGGACACCTTTGATCTGCATGCCTTTGCATCTACTGTAATTAGATACACACCTTGAGTTGAGAGCTATTAACTGCATAATGTTCAAATTTCCAATTAGATTTTTAACTGTTTCGATGTTGTAGTTTCTGAAGATGTGTTCCATTTTGTGTATCCTGCTCGTAAATCTGTAAATGTAATGAATTGATTGATCGATCTCCCAAGGTTGCAACATCCTAACACCTAGCCTCTGAATCACTTCACTGTCCAATGACCTGATTGGGCGTGCTAGTTTTCAAACTTACCTTCCGTTGATCCATCCCAACTGTATCCGTTGACGTACTTCTGACCCCAAATTCAAATTGAGTTCTTTAGAAGGATATAGCCCTCGGAAGATGTGTCATCTTGTTGTAGGCTTGTGGGTTGTTTATTATATTCGCATACATTATGGCTGGAAATCACTTTTGCAGTATACAGACCAAGCCAGTTTGTTCCCAATCAATGTTAACCACATTTTGATGCGACATACTTTCTCTTGTGGATTATGTGGGGACAATATTGTTGAAAATCCATGTAGCTATCTTATTCATTAAAAAATGTGTAGCTATTTGACTCCACACCATATAAAATTTCATTTGTCTACCGTCCATTGTAATTATTTGTAGATTTATATGTTAGAATCTAGATGGAATGATGTGATATGTTGTAGAACATGAGATTGATATCTATTCCTTATTATGCATCTTCAGGGCTATATAATAATAATCTAAAGTTTTTTTTTCCAGGATCTTCTCATTCTATACAACACTTCTATGCTGTTGTATACAGTATACTGCAGTTAAGGAGATCCGCATTTCTGAAATTTGGAAGTTGATCAAACTTGCATAATCCTGCCATAATTTCAAAAGAAAGTGCGACCATGGTAGGAATGGATTTTTTGTGCTGGTAGATTTCTTTTGTGATAAATTATTTAAATAAAAATCAATGAAAGAGAATTTTCAATTGGGAGGAGAATTTTCAAGCACCCATCTCTGAAAGAGAATTTAGAAGAAGATTGGTCAATTCTGATGGCAGAAAGTTCAAACAAGGAGATGAGAGCGGAAAAAGACAAAACGACGGCCCTTTTAGGTCTCTGTTTCTGGGACATGGCGGCGGCGGCGGCGGTGTTGATGATGGAGGCAATTATGGCCCTGATTCTGAAGAAATAATTAACAAATCTGGAAAGAAGCTATGGGGTTTCAATGGCTTGACGAAATGGAAGAGAGACGAAACAGAGGACGAGACAGCTCCATTGGCCCTCCATGAAAGATGTGACAGTGAAGCCTTTTGGGGTTCTTCCAAGTTCAATTCAGATTGCAACGAGTCCAATTGGGAAGGCTCCCAGCACTAAATAATAAAAAGGAAGTTGCATTCAAATGGTTCTCCATCCCATTTCTCCATTGACAAGGTAACGAATTGCTTCAATGGCGTTGGCTTGTAAATTTGGTGCTTTTGTTTCGTTTTCGTGTCCTAATTTCGTTCATAATCAGAAGGTTTTAGGCAAGAGGATTAAAGAAATAGCTTTCACGAGTCCAATCAGAGATCAAATCCACAAATCCCAACCTCAAATACTCGTATAATGGCAGCAACTCGATGCGATGGACGACATTTGACGACGACAAGAAGTGCCAGCCAAATCTCTTCAACAACAATATTAGCAAACCCAAAGGGCTTTCAATGTTGGTGCTTATAATTCTCAAGTATTTGTAAGCATAGAGCTGAAATTACCGTCTCCCTGTCTTGGTTATCTGTTGTCTTGATACAGTTCCTTTTTTGGTGTATATTGTACAAATGTCTGCATGATTCAAACCAAACTGGCTTTTCCAGATATTCATTCGAGCGTTTATGCTCAGGGTAAAACTAAAAACTTGTGCAAATATTTCTTCTGAAACAGCTGTACAATATGAATGCCTTACAAAACCATGGGGATTCAATTCATCCCCAGTATTAACAGGGAACAGGATTACGAAAGTTTCCTTATCGCTAGTGTCATCGATTATACAATTCATCAAATTGACGTTGGAATTTCCAAGTTTGAAATCGAACATTCATCGTTCGAGCCTGCACGAACATCCCCTCTACAAAGTGGGCATACTCTGTTAAACACAGTGATACAGGGAGATGAATCCATGAGTAAAATGATACCTAGACATAAAAATAGATAAAAAGGGAGCAGTAATTGATGATGTATAGGCACAACATACCCATGAATCTCCTTCAACCATTTATCGACGCACGACATATGATACTCGTGGTGGCAAGGAAGGACTCTTATTTTGTCACCGTCTTCGTAATCGGCAAGGCAAATGTAGCATCTAACCAAGCATTTGTAAACAATCCCAAATTAGAAACTAAACAAGAGTACTTGGTTAACGAAAAGAAGGAACCTACTGCTCAATTTCATCCCCTCCATTAGTTTTCTTTTCGTGGTTCTTCAAAGGAAAAGAGTCAACAACTGATTCTGGTGCAGGCAGTGAAACCATGGATAGAGCAAGAGAAACAGGCTGACCATGAATTTCATCCAAGACCTTTAGATACACAAAGAACAAGATGTGAGATACCTGTTGAATTACCCAGCACTTGAACTCCAAAAAGTACCTCAAATAATGCTTCAGCAAGCATGATTATCCGCGATATGCTTGCATGGGTACTCGAGTGTTCGACCCTTGAGAACGAGTCGCATGAACAAGGACCATTAGGATGAATGCCTGATGGGCAAGGTAGATTTTGGCGACTGTTTTCACTGAGACTACTTCGAATTCTTTCCCATAACTGCACCTAATTGAGAAGCAATCATGTATAAACACAATGGAAGAGTGATCATAATTGTTAACATTCAGAATGTAACCTGAGATCTTGAGTTTCTTTGTTGTTCATTCAAGACGTGAATTCTGCTGGAAAAACGCCTTGAATCGCCACTCGCTTCATCATCGATAAAATCGCCACTTAAATCAAGGAGCCACCTGTCTTGATCTCCTGTATTACTAAAGTTATTAGATGGGAAAACAAACGGAGACTCACTATGCCTTCTGAAACTACGCCTTGAAAAGGCATCCCAAAACAGTCTTCTGCTATTCCTTCTAGCCTCAAGATTACTTGCATCAGTGCTACTCGTAGACAAAACATTGGAAGAAACACCGACCATATCAACATCTCCTTGGCCCACCTCCCTATCATCAGACACAAGAGTGTCTAAACTTGAGGGCACCTCTTGCAGAGATTCATCTCCAAGAGACTGGAAAGTAAATGAAAGATCAGGATGACAAGGCGACGATTCAGAGTCTGGGTT

mRNA sequence

AGTGATGATGAACAAATTACCACCTCCTTCAACACAACTTCACACGTTCAATTTAACCCATCAAAGGTGATCCAAATCTTAGAAAGTCTTCGAAGGGAACCCAACAGTGCCTTTTCCTTTTTCCATAAATTGGAGGAACGGGGCTTTCGTCATAACATCTCTACTTATGCAGCTCTCATTAGGATATTGTGCTCTTGGGGTTTGGAGAGAAAGCTTGACTCTCTGTTCTTGAATCTTATTGGCTCCGAGAAAACAGAATTTGATATTTTAGATTTGCTCGAATCACTTAATCAAGGATATGTGATGGATGGCTCATTCATTCGAGCATACGATGCGTTGATCAAGGCTTATGTTAGTGTTAGCTTATTCGATAGTGCTGTGGACTTACTTTTTCGATCAGAAAGGAAGGGATTTGTTCCACATATTTTTACTTGTAATTTTCTCTTGAACCGCCTTATCGAGCATGGGAAATTGAATATGGCTCTAACTGTGTATAAGCAGTTGAAGAGGTTTGGTTTTCATCCTAATGATTATACTTATGCTATTGTAATAAAAGCACTCTGTAAAATGGGTAATATGGAAGAAGCTATAGATATTTTTGAGGAGATGAGTGAAGCTGGGGTGGTCCCAAATGCCTTTGCTTGTACTGCATATATTGAAGGGTTGTGTACCCACCGTTGTTCAGCTTACGGGTATCAGTTGCTACAAGATTGGAGAGCAGCACAGGCCCCGATAGATGTGTATGCTTACTTTGTAGTAATTCGTGGATTTTGTGAAGAGATGGAAGTAAACAAGGCAGAAAATGTTTTTCTCGATATGGAGAAGTATGGAGTAGTTCCAGATGCACAAACTTATGGAGTGTTGATCAATGGTTATTGCAAGATGTTGAAGTTACAAAAGGCTTTGTCTCTTCACAGTTTCATGTTGTCAAAAGAAGTAGTGAACCAATTTAAAGTATTTCAGGATGAGGGAGTGTTTTTCGACAAGGTTGCCTACAATATTGTTGTTCATGCCTTGTGTGAACAAGGGAAATTGGAAGAAGCTATGGAGTTGTTAGAAGATATGACAAGTAGACAGATCCAGATGGATGTTGTTCATTATACAACAATGATTAAAGCACTCTGTAAAATGGGTAATATGGAAGAAGCTATAGATATTTTTGAGGAGATGAGTGAAGCTGGGGTGGTCCCAAATGCCTTTGCTTGTACTGCATATATTGAAGGGTTGTGTACCCACCGTTGTTCAGCTTACGGGTATCAGTTGCTACAAGATTGGAGAGCAGCACAGGCCCCGATAGATGTGTATGCTTACTTTGTAGTAATTCGTGGATTTTGTGAAGAGATGGAAGTAAACAAGGCAGAAAATGTTTTTCTCGATATGGAGAAGTATGGAGTAGTTCCAGATGCACAAACTTATGGAGTGTTGATCAATGGTTATTGCAAGATGTTGAAGTTACAAAAGGCTTTGTCTCTTCACAGTTTCATGTTGTCAAAAGGTATAAAAACAAATTGTGTGATTGTTAGCTCTATTCTTCAATGCTTGATAAGGATGCAAATGTATTCAGAAGTAGTGAACCAATTTAAAGTATTTCAGGATGAGGGAGTGTTTTTCGACAAGGTTGCCTACAATATTGTTGTTCATGCCTTGTGTGAACAAGGGAAATTGGAAGAAGCTATGGAGTTGTTAGAAGATATGACAAGTAGACAGATCCAGATGGATGTTGTTCATTATACAACAATGATTAAAGGTTTTTTTGTCCAAGGAAAAATTTATGAAGCAATGACGATGTTTGAGAATTTGAAGAAAAATGGTATTGAGCCTGACACCATCACTTATAATGTGCTCGCTGCTGGATTATCTAGAAATGGTCTTGTGTCTGAGGTGAAAGACCTTCTAGACTACATGGATGAACATAGTTTGAGAGAAGACCCTAAGATATCCAACCTGATAATTGAAAATTTATGCATAGGAGGCAAAGTGAAAGAAGCGACTGAAATTTTCAATACCAACCGTAGTAAAGATGCATATGAACTTTTTGTTAATTTGTCCAAGAAAGGAGTTCTTTTAAAAAAAAGCTCCCTCTTTAGGCTAGTTAGTAGCCTTTGCATGGATGATTCTAACGACAGAGCTATTAAGGTGATTAAAAGACTTTCAATTATCAACGTGGAGGCTAATGAAATTGTGTACAATAAAGTCATAGCTTCTCTTTGTCGAGCTGGAAATATGAAGATGGCCCAATGTTTATTTGATTGTTTAATTTGTGCTGGGTTAACTCCTGATCTCAAGACTTACACAACGATGATAAATGGTTATTGCAAGATTAATTTTTTGAGGGAAGCTTATGAACTTCTGTGTGATATGAAGATTCGAGGGAGGAAACCTGATATTTTCATCTATACAGTTTTGCTTGATGGTCAATTTAAAACCAGATTACGAGGGCTTTGCTCCTCAGTAGATTTAAGGGGAGCGAAGCAAGAAACGGCTTTTACTTCCACAATTTTTGATGAAATGGAGGACATGAAGATTACTCCAGACGTTATTTGCTACACTGTATTGATTGATGGGTATTGTAAAATGAACAATCTTAATGATGCTATTGTCCTCCTTGAGAAAATGGTTGATCAAGGAATAATGCCTGATACAGTGACATATACCACCCTAGTGTCTGGCTTTTGTAGAAGTGGGGATGTAGAGAAGGCTGTAACTCTATTTGATGATATGTTATCTAAGGGAGTTCTACCTGACGCATTTTTCATCTCTGTTGTCTCACGAAAGTTCAAACAAGGAGATGAGAGCGGAAAAAGACAAAACGACGGCCCTTTTAGGTCTCTGTTTCTGGGACATGGCGGCGGCGGCGGCGGTGTTGATGATGGAGGCAATTATGGCCCTGATTCTGAAGAAATAATTAACAAATCTGGAAAGAAGCTATGGGGTTTCAATGGCTTGACGAAATGGAAGAGAGACGAAACAGAGGACGAGACAGCTCCATTGGCCCTCCATGAAAGATGTGACAGTGAAGCCTTTTGGGGTTCTTCCAAGTTCAATTCAGATTGCAACGAGTCCAATTGGGAAGGCTCCCAGCACTAAATAATAAAAAGGAAGTTGCATTCAAATGGTTCTCCATCCCATTTCTCCATTGACAAGGTTTTAGGCAAGAGGATTAAAGAAATAGCTTTCACGAGTCCAATCAGAGATCAAATCCACAAATCCCAACCTCAAATACTCGTATAATGGCAGCAACTCGATGCGATGGACGACATTTGACGACGACAAGAAGTGCCAGCCAAATCTCTTCAACAACAATATTAGCAAACCCAAAGGGCTTTCAATGTTGGTGCTTATAATTCTCAAGTATTTGTAAGCATAGAGCTGAAATTACCGTCTCCCTGTCTTGGTTATCTGTTGTCTTGATACAGTTCCTTTTTTGGTGTATATTGTACAAATGTCTGCATGATTCAAACCAAACTGGCTTTTCCAGATATTCATTCGAGCGTTTATGCTCAGGGTAAAACTAAAAACTTGTGCAAATATTTCTTCTGAAACAGCTGTACAATATGAATGCCTTACAAAACCATGGGGATTCAATTCATCCCCAGTATTAACAGGGAACAGGATTACGAAAGTTTCCTTATCGCTAGTGTCATCGATTATACAATTCATCAAATTGACGTTGGAATTTCCAAGTTTGAAATCGAACATTCATCGTTCGAGCCTGCACGAACATCCCCTCTACAAAGTGGGCATACTCTGTTAAACACAGTGATACAGGGAGATGAATCCATGAGTAAAATGATACCTAGACATAAAAATAGATAAAAAGGGAGCAGTAATTGATGATGTATAGGCACAACATACCCATGAATCTCCTTCAACCATTTATCGACGCACGACATATGATACTCGTGGTGGCAAGGAAGGACTCTTATTTTGTCACCGTCTTCGTAATCGGCAAGGCAAATGTAGCATCTAACCAAGCATTTGTAAACAATCCCAAATTAGAAACTAAACAAGAGTACTTGGTTAACGAAAAGAAGGAACCTACTGCTCAATTTCATCCCCTCCATTAGTTTTCTTTTCGTGGTTCTTCAAAGGAAAAGAGTCAACAACTGATTCTGGTGCAGGCAGTGAAACCATGGATAGAGCAAGAGAAACAGGCTGACCATGAATTTCATCCAAGACCTTTAGATACACAAAGAACAAGATGTGAGATACCTGTTGAATTACCCAGCACTTGAACTCCAAAAAGTACCTCAAATAATGCTTCAGCAAGCATGATTATCCGCGATATGCTTGCATGGGTACTCGAGTGTTCGACCCTTGAGAACGAGTCGCATGAACAAGGACCATTAGGATGAATGCCTGATGGGCAAGGTAGATTTTGGCGACTGTTTTCACTGAGACTACTTCGAATTCTTTCCCATAACTGCACCTAATTGAGAAGCAATCATGTATAAACACAATGGAAGAGTGATCATAATTGTTAACATTCAGAATGTAACCTGAGATCTTGAGTTTCTTTGTTGTTCATTCAAGACGTGAATTCTGCTGGAAAAACGCCTTGAATCGCCACTCGCTTCATCATCGATAAAATCGCCACTTAAATCAAGGAGCCACCTGTCTTGATCTCCTGTATTACTAAAGTTATTAGATGGGAAAACAAACGGAGACTCACTATGCCTTCTGAAACTACGCCTTGAAAAGGCATCCCAAAACAGTCTTCTGCTATTCCTTCTAGCCTCAAGATTACTTGCATCAGTGCTACTCGTAGACAAAACATTGGAAGAAACACCGACCATATCAACATCTCCTTGGCCCACCTCCCTATCATCAGACACAAGAGTGTCTAAACTTGAGGGCACCTCTTGCAGAGATTCATCTCCAAGAGACTGGAAAGTAAATGAAAGATCAGGATGACAAGGCGACGATTCAGAGTCTGGGTT

Coding sequence (CDS)

AGTGATGATGAACAAATTACCACCTCCTTCAACACAACTTCACACGTTCAATTTAACCCATCAAAGGTGATCCAAATCTTAGAAAGTCTTCGAAGGGAACCCAACAGTGCCTTTTCCTTTTTCCATAAATTGGAGGAACGGGGCTTTCGTCATAACATCTCTACTTATGCAGCTCTCATTAGGATATTGTGCTCTTGGGGTTTGGAGAGAAAGCTTGACTCTCTGTTCTTGAATCTTATTGGCTCCGAGAAAACAGAATTTGATATTTTAGATTTGCTCGAATCACTTAATCAAGGATATGTGATGGATGGCTCATTCATTCGAGCATACGATGCGTTGATCAAGGCTTATGTTAGTGTTAGCTTATTCGATAGTGCTGTGGACTTACTTTTTCGATCAGAAAGGAAGGGATTTGTTCCACATATTTTTACTTGTAATTTTCTCTTGAACCGCCTTATCGAGCATGGGAAATTGAATATGGCTCTAACTGTGTATAAGCAGTTGAAGAGGTTTGGTTTTCATCCTAATGATTATACTTATGCTATTGTAATAAAAGCACTCTGTAAAATGGGTAATATGGAAGAAGCTATAGATATTTTTGAGGAGATGAGTGAAGCTGGGGTGGTCCCAAATGCCTTTGCTTGTACTGCATATATTGAAGGGTTGTGTACCCACCGTTGTTCAGCTTACGGGTATCAGTTGCTACAAGATTGGAGAGCAGCACAGGCCCCGATAGATGTGTATGCTTACTTTGTAGTAATTCGTGGATTTTGTGAAGAGATGGAAGTAAACAAGGCAGAAAATGTTTTTCTCGATATGGAGAAGTATGGAGTAGTTCCAGATGCACAAACTTATGGAGTGTTGATCAATGGTTATTGCAAGATGTTGAAGTTACAAAAGGCTTTGTCTCTTCACAGTTTCATGTTGTCAAAAGAAGTAGTGAACCAATTTAAAGTATTTCAGGATGAGGGAGTGTTTTTCGACAAGGTTGCCTACAATATTGTTGTTCATGCCTTGTGTGAACAAGGGAAATTGGAAGAAGCTATGGAGTTGTTAGAAGATATGACAAGTAGACAGATCCAGATGGATGTTGTTCATTATACAACAATGATTAAAGCACTCTGTAAAATGGGTAATATGGAAGAAGCTATAGATATTTTTGAGGAGATGAGTGAAGCTGGGGTGGTCCCAAATGCCTTTGCTTGTACTGCATATATTGAAGGGTTGTGTACCCACCGTTGTTCAGCTTACGGGTATCAGTTGCTACAAGATTGGAGAGCAGCACAGGCCCCGATAGATGTGTATGCTTACTTTGTAGTAATTCGTGGATTTTGTGAAGAGATGGAAGTAAACAAGGCAGAAAATGTTTTTCTCGATATGGAGAAGTATGGAGTAGTTCCAGATGCACAAACTTATGGAGTGTTGATCAATGGTTATTGCAAGATGTTGAAGTTACAAAAGGCTTTGTCTCTTCACAGTTTCATGTTGTCAAAAGGTATAAAAACAAATTGTGTGATTGTTAGCTCTATTCTTCAATGCTTGATAAGGATGCAAATGTATTCAGAAGTAGTGAACCAATTTAAAGTATTTCAGGATGAGGGAGTGTTTTTCGACAAGGTTGCCTACAATATTGTTGTTCATGCCTTGTGTGAACAAGGGAAATTGGAAGAAGCTATGGAGTTGTTAGAAGATATGACAAGTAGACAGATCCAGATGGATGTTGTTCATTATACAACAATGATTAAAGGTTTTTTTGTCCAAGGAAAAATTTATGAAGCAATGACGATGTTTGAGAATTTGAAGAAAAATGGTATTGAGCCTGACACCATCACTTATAATGTGCTCGCTGCTGGATTATCTAGAAATGGTCTTGTGTCTGAGGTGAAAGACCTTCTAGACTACATGGATGAACATAGTTTGAGAGAAGACCCTAAGATATCCAACCTGATAATTGAAAATTTATGCATAGGAGGCAAAGTGAAAGAAGCGACTGAAATTTTCAATACCAACCGTAGTAAAGATGCATATGAACTTTTTGTTAATTTGTCCAAGAAAGGAGTTCTTTTAAAAAAAAGCTCCCTCTTTAGGCTAGTTAGTAGCCTTTGCATGGATGATTCTAACGACAGAGCTATTAAGGTGATTAAAAGACTTTCAATTATCAACGTGGAGGCTAATGAAATTGTGTACAATAAAGTCATAGCTTCTCTTTGTCGAGCTGGAAATATGAAGATGGCCCAATGTTTATTTGATTGTTTAATTTGTGCTGGGTTAACTCCTGATCTCAAGACTTACACAACGATGATAAATGGTTATTGCAAGATTAATTTTTTGAGGGAAGCTTATGAACTTCTGTGTGATATGAAGATTCGAGGGAGGAAACCTGATATTTTCATCTATACAGTTTTGCTTGATGGTCAATTTAAAACCAGATTACGAGGGCTTTGCTCCTCAGTAGATTTAAGGGGAGCGAAGCAAGAAACGGCTTTTACTTCCACAATTTTTGATGAAATGGAGGACATGAAGATTACTCCAGACGTTATTTGCTACACTGTATTGATTGATGGGTATTGTAAAATGAACAATCTTAATGATGCTATTGTCCTCCTTGAGAAAATGGTTGATCAAGGAATAATGCCTGATACAGTGACATATACCACCCTAGTGTCTGGCTTTTGTAGAAGTGGGGATGTAGAGAAGGCTGTAACTCTATTTGATGATATGTTATCTAAGGGAGTTCTACCTGACGCATTTTTCATCTCTGTTGTCTCACGAAAGTTCAAACAAGGAGATGAGAGCGGAAAAAGACAAAACGACGGCCCTTTTAGGTCTCTGTTTCTGGGACATGGCGGCGGCGGCGGCGGTGTTGATGATGGAGGCAATTATGGCCCTGATTCTGAAGAAATAATTAACAAATCTGGAAAGAAGCTATGGGGTTTCAATGGCTTGACGAAATGGAAGAGAGACGAAACAGAGGACGAGACAGCTCCATTGGCCCTCCATGAAAGATGTGACAGTGAAGCCTTTTGGGGTTCTTCCAAGTTCAATTCAGATTGCAACGAGTCCAATTGGGAAGGCTCCCAGCACTAA

Protein sequence

SDDEQITTSFNTTSHVQFNPSKVIQILESLRREPNSAFSFFHKLEERGFRHNISTYAALIRILCSWGLERKLDSLFLNLIGSEKTEFDILDLLESLNQGYVMDGSFIRAYDALIKAYVSVSLFDSAVDLLFRSERKGFVPHIFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPNDYTYAIVIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRAAQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVPDAQTYGVLINGYCKMLKLQKALSLHSFMLSKEVVNQFKVFQDEGVFFDKVAYNIVVHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRAAQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVPDAQTYGVLINGYCKMLKLQKALSLHSFMLSKGIKTNCVIVSSILQCLIRMQMYSEVVNQFKVFQDEGVFFDKVAYNIVVHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKGFFVQGKIYEAMTMFENLKKNGIEPDTITYNVLAAGLSRNGLVSEVKDLLDYMDEHSLREDPKISNLIIENLCIGGKVKEATEIFNTNRSKDAYELFVNLSKKGVLLKKSSLFRLVSSLCMDDSNDRAIKVIKRLSIINVEANEIVYNKVIASLCRAGNMKMAQCLFDCLICAGLTPDLKTYTTMINGYCKINFLREAYELLCDMKIRGRKPDIFIYTVLLDGQFKTRLRGLCSSVDLRGAKQETAFTSTIFDEMEDMKITPDVICYTVLIDGYCKMNNLNDAIVLLEKMVDQGIMPDTVTYTTLVSGFCRSGDVEKAVTLFDDMLSKGVLPDAFFISVVSRKFKQGDESGKRQNDGPFRSLFLGHGGGGGGVDDGGNYGPDSEEIINKSGKKLWGFNGLTKWKRDETEDETAPLALHERCDSEAFWGSSKFNSDCNESNWEGSQH

Homology

[Close]

BLAST of Cp4.1LG04g08950.1 vs. ExPASy Swiss-Prot
Match: O81028 (Pentatricopeptide repeat-containing protein At2g26790, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g26790 PE=3 SV=1)

HSP 1 Score: 466.1 bits (1198), Expect = 1.0e-129
Identity = 308/936 (32.91%), Postives = 452/936 (48.29%), Query Frame = 0


Query: 25  QILESLRREPNSAFSFFHKLEERGFRHNISTYAALIRILCSWGLERKLDSLFLNLIGSEK 84
           ++L S R +PN A SF  +L+E G   N++ YA L+RIL +WGL+ KLDS+ + LI +E+
Sbjct: 61  RLLNSTRDDPNLALSFLRQLKEHGVSPNVNAYATLVRILTTWGLDIKLDSVLVELIKNEE 120

Query: 85  TEFDILDLLESL-NQGYVMDGSF--IRAYDALIKAYVSVSLFDSAVDLLFRSERKGFVPH 144
             F ++DL+E +  Q      SF  IR   AL+KAYVS+ +FD A D+LF+S+R   V  
Sbjct: 121 RGFTVMDLIEVIGEQAEEKKRSFVLIRVSGALVKAYVSLGMFDEATDVLFQSKRLDCVVD 180

Query: 145 IFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPNDYTYAIVIKALCKMGNMEEAIDIFE 204
           I  CNFL+NR+ E GK+ M +T++KQLK+ G   N+YTYAIV+KALC+ GN+EEA  +  
Sbjct: 181 IKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAML-- 240

Query: 205 EMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRAAQAPIDVYAYFVVIRGFCEEM 264
                                                                       
Sbjct: 241 ------------------------------------------------------------ 300

Query: 265 EVNKAENVFLDMEKYGVVPDAQTYGVLINGYCKMLKLQKALSLHSFMLSKEVVNQFKVFQ 324
                                                                    + +
Sbjct: 301 ---------------------------------------------------------LIE 360

Query: 325 DEGVFFDKVAYNIVVHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKALCKMGNME 384
           +E VF     Y   ++ LC  G+ E+A+ L+ ++  R+                      
Sbjct: 361 NESVF----GYKTFINGLCVTGETEKAVALILELIDRK---------------------- 420

Query: 385 EAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRAAQAPIDVYAYFVVI 444
                                  Y+ G               D RA           +V+
Sbjct: 421 -----------------------YLAG--------------DDLRAVLG--------MVV 480

Query: 445 RGFCEEMEVNKAENVFLDMEKYGVVPDAQTYGVLINGYCKMLKLQKALSLHSFMLSKGIK 504
           RGFC EM++  AE+V ++ME+ G   D      +I+ YCK + L +AL     ML KG+K
Sbjct: 481 RGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLK 540

Query: 505 TNCVIVSSILQCLIRMQMYSEVVNQFKVFQDEGVFFDKVAYNIVVHALCEQGKLEEAMEL 564
            NCVIVS ILQC  +M M  E + +FK F+D  +F D+V YN+   AL + G++EEA EL
Sbjct: 541 VNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFEL 600

Query: 565 LEDMTSRQIQMDVVHYTTMIKGFFVQGKIYEAMTMFENLKKNGIEPDTITYNVLAAGLSR 624
           L++M  R I  DV++YTT+I G+ +QGK+ +A+ + + +  NG+ PD ITYNVL +GL+R
Sbjct: 601 LQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLAR 660

Query: 625 NGLVSEVKDLLDYMDEHSLREDPKISNLIIENLCIGGKVKEATEIFNT------------ 684
           NG   EV ++ + M     + +   +++IIE LC   KVKEA + F++            
Sbjct: 661 NGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASF 720

Query: 685 -------NRSKDAYELFVNLSKKGVLLKKSSLFRLVSSLCMDDSNDRAIKVIKRLSIINV 744
                    SK AY+ FV L      L+KS   +L  SLC++   ++A  V+K++S   V
Sbjct: 721 VKGYCEAGLSKKAYKAFVRLEYP---LRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRV 780

Query: 745 EANEIVYNKVIASLCRAGNMKMAQCLFDCLICAGLTPDLKTYTTMINGYCKINFLREAYE 804
           E    +  K+I + C+  N++ AQ LFD ++  GL PDL TYT MI+ YC++N L++A  
Sbjct: 781 EPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAES 799

Query: 805 LLCDMKIRGRKPDIFIYTVLLDGQFK--TRLRGLCSSVDLRGAKQETAFTSTIFDEMEDM 864
           L  DMK RG KPD+  YTVLLD   K        CS     G ++     S +  E    
Sbjct: 841 LFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRK----ASEVLREFSAA 799

Query: 865 KITPDVICYTVLIDGYCKMNNLNDAIVLLEKMVDQGIMPDTVTYTTLVSGFCRSGDVEKA 924
            I  DV+CYTVLID  CKMNNL  A  L ++M+D G+ PD V YTTL+S + R G ++ A
Sbjct: 901 GIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMA 799

Query: 925 VTLFDDMLSKGVLPDAFFISVV------SRKFKQGD 931
           VTL  ++  K  +P   F + V      +++F+ G+
Sbjct: 961 VTLVTELSKKYNIPSESFEAAVKSAALKAKRFQYGE 799

[Close]

BLAST of Cp4.1LG04g08950.1 vs. ExPASy Swiss-Prot
Match: Q9LMH5 (Putative pentatricopeptide repeat-containing protein At1g13800 OS=Arabidopsis thaliana OX=3702 GN=At1g13800 PE=3 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 1.2e-96
Identity = 258/952 (27.10%), Postives = 424/952 (44.54%), Query Frame = 0


Query: 1   SDDEQITTSFNTTSHVQFNPSKVIQILESLRREPNSAFSFFHKLEERGFRHNISTYAALI 60
           S  EQ+         ++ N   V+++L S++ +P  A SF  ++E      ++  YA +I
Sbjct: 38  SHSEQVKEGTFDYKALELNDIGVLRVLNSMKDDPYLALSFLKRIEGNVTLPSVQAYATVI 97

Query: 61  RILCSWGLERKLDSLFLNLI--GSEKTEFDILDLLESLNQGYVMDGSFIRAYDALIKAYV 120
           RI+C WGL++KLD+    L+  G E   F ++DLL+++ +        IR   AL+KAY 
Sbjct: 98  RIVCGWGLDKKLDTFLFELVRRGDEGRGFSVMDLLKAIGEMEQSLVLLIRVSTALVKAYA 157

Query: 121 SVSLFDSAVDLLFRSERK-GFVPHIFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPND 180
           ++ +FD A+D+ FR+    G  P I   NFL++R+I  G+ +M +  + +++R G   + 
Sbjct: 158 NLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADA 217

Query: 181 YTYAIVIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQD 240
           +TY +V++AL +  + EE   +   +  +           +IEGLC ++ +   Y LLQ 
Sbjct: 218 HTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQP 277

Query: 241 WRAAQAPIDV----YAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVPDAQTYGVLINGYC 300
            R A   +D      AY  V+RG C EM +  AE+V LDMEK+G+ PD   Y  +I G+ 
Sbjct: 278 LRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHR 337

Query: 301 KMLKLQKALSLHSFMLSK-----------------------EVVNQFKVFQDEGVFFDKV 360
           K + + KA+ + + ML K                       E  + FK F++  +  D+V
Sbjct: 338 KNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRV 397

Query: 361 AYNIVVHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKALCKMGNMEEAIDIFEEM 420
            YN+   AL + GK+EEA+EL  +MT + I  DV++YTT+I   C  G   +A D+  EM
Sbjct: 398 CYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEM 457

Query: 421 SEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRAAQAPIDVYAYFVVIRGFCEEMEV 480
              G  P+         GL T+  +   ++ L+             + +VI G  +  E+
Sbjct: 458 DGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGEL 517

Query: 481 NKAENVFLDMEKYGVVPDAQTYGVLINGYCKMLKLQKALSLHSFMLSKGIKTNCVIVSSI 540
           +KAE  +  +E      DA     ++ G+C    L  A     F+  +      V  +  
Sbjct: 518 DKAEAFYESLEHKSRENDAS----MVKGFCAAGCLDHA--FERFIRLEFPLPKSVYFTLF 577

Query: 541 LQCLIRMQMYSEVVNQFKVFQDEGVFFDKVAYNIVVHALCEQGKLEEAMELLEDMTSRQI 600
                     S+  +        GV  +K  Y  ++ A C    + +A E  E + +++I
Sbjct: 578 TSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKI 637

Query: 601 QMDVVHYTTMIKGFFVQGKIYEAMTMFENLKKNGIEPDTITYNVLAAGLSRNGLVSEVKD 660
             D+  YT MI  +    +  +A  +FE++K+  ++PD +TY+VL               
Sbjct: 638 VPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVL--------------- 697

Query: 661 LLDYMDEHSLREDPKISNLIIENLCIGGKVKEATEIFNTNRSKDAYELFVNLSKKGVLLK 720
                    L  DP++                     +  R  +A+++  ++        
Sbjct: 698 ---------LNSDPEL---------------------DMKREMEAFDVIPDV-------- 757

Query: 721 KSSLFRLVSSLCMDDSNDRAIKVIKRLSIINVEANEIVYNKVIASLCRAGNMKMAQCLFD 780
                                               + Y  +I   C   ++K    LF 
Sbjct: 758 ------------------------------------VYYTIMINRYCHLNDLKKVYALFK 817

Query: 781 CLICAGLTPDLKTYTTMINGYCKINFLREAYELLCDMKIRGRKPDIFIYTVLLDGQFKTR 840
            +    + PD+ TYT ++    + N  RE       MK    KPD+F YTVL+D Q    
Sbjct: 818 DMKRREIVPDVVTYTVLLKNKPERNLSRE-------MKAFDVKPDVFYYTVLIDWQ---- 872

Query: 841 LRGLCSSVDLRGAKQETAFTSTIFDEMEDMKITPDVICYTVLIDGYCKMNNLNDAIVLLE 900
               C   DL  AK+       IFD+M +  + PD   YT LI   CKM  L +A ++ +
Sbjct: 878 ----CKIGDLGEAKR-------IFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFD 872

Query: 901 KMVDQGIMPDTVTYTTLVSGFCRSGDVEKAVTLFDDMLSKGVLPDAFFISVV 923
           +M++ G+ PD V YT L++G CR+G V KAV L  +ML KG+ P    +S V
Sbjct: 938 RMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAV 872

[Close]

BLAST of Cp4.1LG04g08950.1 vs. ExPASy Swiss-Prot
Match: Q9FJE6 (Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis thaliana OX=3702 GN=At5g59900 PE=3 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 3.3e-75
Identity = 222/895 (24.80%), Postives = 384/895 (42.91%), Query Frame = 0


Query: 23  VIQILESLRREPNSAFSFFHKLE-ERGFRHNISTYAALIRILCSWGLERKLDSLFLNLIG 82
           V +IL     +P     FF+ L   RGF H+ +++  LI  L    L     SL   L+ 
Sbjct: 73  VEEILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLL 132

Query: 83  SEKTEFDILDLLESLNQGYVMDGSFIRAYDALIKAYV-SVSLFDSAVDLLFRSERKGFVP 142
                 D+ ++L S  +   +  S   ++D LI+ YV S  + D  +       +   +P
Sbjct: 133 RALKPSDVFNVLFSCYEKCKLSSS--SSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLP 192

Query: 143 HIFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPNDYTYAIVIKALCKMGNMEEAIDIF 202
            + T + LL+ L++     +A+ ++  +   G  P+ Y Y  VI++LC++ ++  A ++ 
Sbjct: 193 EVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMI 252

Query: 203 EEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRAAQAPIDVYAYFVVIRGFCEE 262
             M   G                                     +++  Y V+I G C++
Sbjct: 253 AHMEATG-----------------------------------CDVNIVPYNVLIDGLCKK 312

Query: 263 MEVNKAENVFLDMEKYGVVPDAQTYGVLINGYCKMLKLQKALSLHSFMLSKEVVNQFKVF 322
            +V +A  +  D+    + PD  TY  L+ G CK+ + +  L +   ML           
Sbjct: 313 QKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSP----- 372

Query: 323 QDEGVFFDKVAYNIVVHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKALCKMGNM 382
                   + A + +V  L ++GK+EEA+ L++ +    +  ++  Y  +I +LCK    
Sbjct: 373 -------SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKF 432

Query: 383 EEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRAAQAPIDVYAYFVV 442
            EA  +F+ M + G+ PN    +  I+  C           L +       + VY Y  +
Sbjct: 433 HEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSL 492

Query: 443 IRGFCEEMEVNKAENVFLDMEKYGVVPDAQTYGVLINGYCKMLKLQKALSLHSFMLSKGI 502
           I G C+  +++ AE    +M    + P   TY  L+ GYC   K+ KAL L+  M  KGI
Sbjct: 493 INGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 552

Query: 503 KTNCVIVSSILQCLIRMQMYSEVVNQFKVFQDEGVFFDKVAYNIVVHALCEQGKLEEAME 562
             +    +++L  L R  +  + V  F    +  V  ++V YN+++   CE+G + +A E
Sbjct: 553 APSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFE 612

Query: 563 LLEDMTSRQIQMDVVHYTTMIKGFFVQGKIYEAMTMFENLKKNGIEPDTITYNVLAAGLS 622
            L++MT + I  D   Y  +I G  + G+  EA    + L K   E + I Y  L  G  
Sbjct: 613 FLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFC 672

Query: 623 RNGLVSEVKDLLDYMDEHSLREDPKISNLIIENLCIGGKVKEATEIFNTNRSKDAYELFV 682
           R G + E   +   M +  +  D     L+   + I G +K           KD  +LF 
Sbjct: 673 REGKLEEALSVCQEMVQRGVDLD-----LVCYGVLIDGSLKH----------KDR-KLFF 732

Query: 683 NLSKKGVLLKKSSLFRLVSSLCMDDSNDRAIKVIKRLSIINVEANEIVYNKVIASLCRAG 742
            L K                    + +DR +K            ++++Y  +I +  + G
Sbjct: 733 GLLK--------------------EMHDRGLK-----------PDDVIYTSMIDAKSKTG 792

Query: 743 NMKMAQCLFDCLICAGLTPDLKTYTTMINGYCKINFLREAYELLCDMKIRGRKPDIFIYT 802
           + K A  ++D +I  G  P+  TYT +ING CK  F+ EA  L   M+     P+   Y 
Sbjct: 793 DFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYG 852

Query: 803 VLLDGQFKTRLRGLCSSVDLRGAKQETAFTSTIFDEMEDMKITPDVICYTVLIDGYCKMN 862
             LD   K  +  +  +V+L  A  +    +T                Y +LI G+C+  
Sbjct: 853 CFLDILTKGEV-DMQKAVELHNAILKGLLANT--------------ATYNMLIRGFCRQG 856

Query: 863 NLNDAIVLLEKMVDQGIMPDTVTYTTLVSGFCRSGDVEKAVTLFDDMLSKGVLPD 916
            + +A  L+ +M+  G+ PD +TYTT+++  CR  DV+KA+ L++ M  KG+ PD
Sbjct: 913 RIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPD 856

[Close]

BLAST of Cp4.1LG04g08950.1 vs. ExPASy Swiss-Prot
Match: Q9LER0 (Pentatricopeptide repeat-containing protein At5g14770, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g14770 PE=3 SV=2)

HSP 1 Score: 266.5 bits (680), Expect = 1.2e-69
Identity = 204/811 (25.15%), Postives = 373/811 (45.99%), Query Frame = 0


Query: 108 RAYDALIKAYVSVSLFDSAVDLLF-RSERKGFVPHIFTCNFLLNRLIEHGKLNMALTVYK 167
           R +++LI  +    L    V L++ +    G  P +F  N L++   + G+L+ A+++  
Sbjct: 96  RLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISL-- 155

Query: 168 QLKRFGFHPNDYTYAIVIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHR 227
            L+      +  TY  VI  LC+ G  +EA     EM + G++P+  +    I+G C   
Sbjct: 156 -LRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVG 215

Query: 228 CSAYGYQLLQDWRAAQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVPDAQTYG 287
                  L+ +     + +++  + +++  +     ++  E  + DM   G  PD  T+ 
Sbjct: 216 NFVRAKALVDE----ISELNLITHTILLSSY---YNLHAIEEAYRDMVMSGFDPDVVTFS 275

Query: 288 VLINGYCKMLKLQKALSLHSFMLSKEVVNQFKVFQDEGVFFDKVAYNIVVHALCEQGKLE 347
            +IN  CK  K+     L   +L +E+       ++  V+ + V Y  +V +L +     
Sbjct: 276 SIINRLCKGGKV-----LEGGLLLREM-------EEMSVYPNHVTYTTLVDSLFKANIYR 335

Query: 348 EAMELLEDMTSRQIQMDVVHYTTMIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYI 407
            A+ L   M  R I +D+V YT ++  L K G++ EA   F+ + E   VPN    TA +
Sbjct: 336 HALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALV 395

Query: 408 EGLC-THRCSAYGYQLLQDWRAAQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGV 467
           +GLC     S+  + + Q    +  P +V  Y  +I G+ ++  + +A ++   ME   V
Sbjct: 396 DGLCKAGDLSSAEFIITQMLEKSVIP-NVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNV 455

Query: 468 VPDAQTYGVLINGYCKMLKLQKALSLHSFMLSKGIKTNCVIVSSILQCLIRMQMYSEVVN 527
           VP+  TYG +I+G  K  K + A+ L   M   G++ N  I+ +++  L R+    EV  
Sbjct: 456 VPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKG 515

Query: 528 QFKVFQDEGVFFDKVAYNIVVHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKGFF 587
             K    +GV  D++ Y  ++    + G  E A+   E+M  R +  DVV Y  +I G  
Sbjct: 516 LVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGML 575

Query: 588 VQGKIYEAMTMFENLKKNGIEPDTITYNVLAAGLSRNGLVSEVKDLLDYMDEHSLREDPK 647
             GK+  A   ++ +++ GIEPD  T+N++     + G    +  L D M    ++    
Sbjct: 576 KFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLM 635

Query: 648 ISNLIIENLCIGGKVKEATEIFN------TNRSKDAYELFVNLSKK-------------- 707
             N+++  LC  GK++EA  I N       + +   Y +F++ S K              
Sbjct: 636 SCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETL 695

Query: 708 ---GVLLKKSSLFRLVSSLCMDDSNDRAIKVIKRLSIINVEANEIVYNKVIASLCRAGNM 767
              G+ L +     L+++LC      +A  V+  +       + + +N ++       ++
Sbjct: 696 LSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHV 755

Query: 768 KMAQCLFDCLICAGLTPDLKTYTTMINGYCKINFLREAYELLCDMKIRGRKPDIFIYTVL 827
           + A   +  ++ AG++P++ TY T+I G      ++E  + L +MK RG +PD F Y  L
Sbjct: 756 RKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNAL 815

Query: 828 LDGQFKTRLRGLCSSVDLRGAKQETAFTSTIFDEMEDMKITPDVICYTVLIDGYCKMNNL 887
           + GQ K          +++G       + TI+ EM    + P    Y VLI  +  +  +
Sbjct: 816 ISGQAKIG--------NMKG-------SMTIYCEMIADGLVPKTSTYNVLISEFANVGKM 867

Query: 888 NDAIVLLEKMVDQGIMPDTVTYTTLVSGFCR 894
             A  LL++M  +G+ P+T TY T++SG C+
Sbjct: 876 LQARELLKEMGKRGVSPNTSTYCTMISGLCK 867

[Close]

BLAST of Cp4.1LG04g08950.1 vs. ExPASy Swiss-Prot
Match: Q9FIT7 (Pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g61990 PE=2 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 2.1e-69
Identity = 218/963 (22.64%), Postives = 416/963 (43.20%), Query Frame = 0


Query: 8   TSFNTTSHVQFNPSKVIQILESLR-REPNSAFSFFHKLE-ERGFRHNISTYAALIRILCS 67
           T  ++   ++ NP  V+ +L S R  +P+   SFF+ ++ ++     + +++ L   LC+
Sbjct: 50  TLVSSNLSIEINPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCN 109

Query: 68  WGLERKLDSLFLNLIGSEKTEFDILDLLESLNQGYVMDGSFIRAYDALIKAYVSVSLFDS 127
           +G   K  S+   +I       ++   +   +Q +V        +  L   Y++    + 
Sbjct: 110 FGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEE 169

Query: 128 AVDLLFRSERKGFVPHIFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPNDYTYAIVIK 187
           AV +   S     VP +  C  LL+ L+   +L++   VYK +       +  TY ++I 
Sbjct: 170 AVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLII 229

Query: 188 ALCKMGNMEEAIDIF---------------------EEMSEAGVVPNAFACTAYIEGLCT 247
           A C+ GN++   D+                      E M   G+VP  +     I+GLC 
Sbjct: 230 AHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCK 289

Query: 248 HRCSAYGYQLLQDWRAAQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVPDAQT 307
            +       LL +  +    +D + Y ++I G  +    + A+ +  +M  +G+      
Sbjct: 290 IKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYM 349

Query: 308 YGVLINGYCKMLKLQKALSLHSFMLSKEVVNQFKVFQDEGVFFDKVAYNIVVHALCEQGK 367
           Y   I    K   ++KA +L   M++  ++ Q +            AY  ++   C +  
Sbjct: 350 YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQ------------AYASLIEGYCREKN 409

Query: 368 LEEAMELLEDMTSRQIQMDVVHYTTMIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTA 427
           + +  ELL +M  R I +    Y T++K +C  G+++ A +I +EM  +G  PN    T 
Sbjct: 410 VRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTT 469

Query: 428 YIEGLCTHRCSAYGYQLLQDWRAAQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYG 487
            I+    +       ++L++ +      D++ Y  +I G  +   +++A +  ++M + G
Sbjct: 470 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 529

Query: 488 VVPDAQTYGVLINGYCKMLKLQKALSLHSFMLSKGIKTNCVIVSSILQCLIRMQMYSEVV 547
           + P+A TYG  I+GY +  +   A      M   G+  N V+ + ++    +     E  
Sbjct: 530 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEAC 589

Query: 548 NQFKVFQDEGVFFDKVAYNIVVHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKGF 607
           + ++   D+G+  D   Y ++++ L +  K+++A E+  +M  + I  DV  Y  +I GF
Sbjct: 590 SAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGF 649

Query: 608 FVQGKIYEAMTMFENLKKNGIEPDTITYNVLAAGLSRNGLVSEVKDLLDYMDEHSLREDP 667
              G + +A ++F+ + + G+ P+ I YN+L  G  R+G + + K+LLD M    L  + 
Sbjct: 650 SKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNA 709

Query: 668 KISNLIIENLCIGGKVKEATEIFNTNRSKD------AYELFVN----------------L 727
                II+  C  G + EA  +F+  + K        Y   V+                 
Sbjct: 710 VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT 769

Query: 728 SKKGVLLKKSSLFRLVSSLCMDDSNDRAIKVIKRLSIINVE----ANEIVYNKVIASLCR 787
           +KKG     +    L++ +      +   +V+ RL   + +     N++ YN +I  LC+
Sbjct: 770 NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCK 829

Query: 788 AGNMKMAQCLFDCLICAGLTPDLKTYTTMINGYCKINFLREAYELLCDMKIRGRKPDIFI 847
            GN++ A+ LF  +  A L P + TYT+++NGY K+                GR+ ++F 
Sbjct: 830 EGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKM----------------GRRAEMF- 889

Query: 848 YTVLLDGQFKTRLRGLCSSVDLRGAKQETAFTSTIFDEMEDMKITPDVICYTVLIDGYCK 907
                                             +FDE     I PD I Y+V+I+ + K
Sbjct: 890 ---------------------------------PVFDEAIAAGIEPDHIMYSVIINAFLK 949

Query: 908 MNNLNDAIVLLEKM-----VDQGIMPDTVTYTTLVSGFCRSGDVEKAVTLFDDMLSKGVL 917
                 A+VL+++M     VD G      T   L+SGF + G++E A  + ++M+    +
Sbjct: 950 EGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYI 950

[Close]

BLAST of Cp4.1LG04g08950.1 vs. NCBI nr
Match: XP_023530445.1 (pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1372 bits (3551), Expect = 0.0
Identity = 737/946 (77.91%), Postives = 738/946 (78.01%), Query Frame = 0


Query: 1   SDDEQITTSFNTTSHVQFNPSKVIQILESLRREPNSAFSFFHKLEERGFRHNISTYAALI 60
           SDDEQITTSFNTTSHVQFNPSKVIQILESLRREPNSAFSFFHKLEERGFRHNISTYAALI
Sbjct: 40  SDDEQITTSFNTTSHVQFNPSKVIQILESLRREPNSAFSFFHKLEERGFRHNISTYAALI 99

Query: 61  RILCSWGLERKLDSLFLNLIGSEKTEFDILDLLESLNQGYVMDGSFIRAYDALIKAYVSV 120
           RILCSWGLERKLDSLFLNLIGSEKTEFDILDLLESLNQGYVMDGSFIRAYDALIKAYVSV
Sbjct: 100 RILCSWGLERKLDSLFLNLIGSEKTEFDILDLLESLNQGYVMDGSFIRAYDALIKAYVSV 159

Query: 121 SLFDSAVDLLFRSERKGFVPHIFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPNDYTY 180
           SLFDSAVDLLFRSERKGFVPHIFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPNDYTY
Sbjct: 160 SLFDSAVDLLFRSERKGFVPHIFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPNDYTY 219

Query: 181 AIVIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRA 240
           AIVIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRA
Sbjct: 220 AIVIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRA 279

Query: 241 AQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVPDAQTYGVLINGYCKMLKLQK 300
           AQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVPDAQTYGVLINGYCKMLKLQK
Sbjct: 280 AQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVPDAQTYGVLINGYCKMLKLQK 339

Query: 301 ALSLHSFMLSKEVVNQFKVFQDEGVFFDKVAYNIVVHALCEQGKLEEAMELLEDMTSRQI 360
           ALSLHSFMLSK                                                 
Sbjct: 340 ALSLHSFMLSK------------------------------------------------- 399

Query: 361 QMDVVHYTTMIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQ 420
                                                                       
Sbjct: 400 ------------------------------------------------------------ 459

Query: 421 LLQDWRAAQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVPDAQTYGVLINGYC 480
                                                                       
Sbjct: 460 ------------------------------------------------------------ 519

Query: 481 KMLKLQKALSLHSFMLSKGIKTNCVIVSSILQCLIRMQMYSEVVNQFKVFQDEGVFFDKV 540
                             GIKTNCVIVSSILQCLIRMQMYSEVVNQFKVFQDEGVFFDKV
Sbjct: 520 ------------------GIKTNCVIVSSILQCLIRMQMYSEVVNQFKVFQDEGVFFDKV 579

Query: 541 AYNIVVHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKGFFVQGKIYEAMTMFENL 600
           AYNIVVHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKGFFVQGKIYEAMTMFENL
Sbjct: 580 AYNIVVHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKGFFVQGKIYEAMTMFENL 639

Query: 601 KKNGIEPDTITYNVLAAGLSRNGLVSEVKDLLDYMDEHSLREDPKISNLIIENLCIGGKV 660
           KKNGIEPDTITYNVLAAGLSRNGLVSEVKDLLDYMDEHSLREDPKISNLIIENLCIGGKV
Sbjct: 640 KKNGIEPDTITYNVLAAGLSRNGLVSEVKDLLDYMDEHSLREDPKISNLIIENLCIGGKV 699

Query: 661 KEATEIFNT-------------------NRSKDAYELFVNLSKKGVLLKKSSLFRLVSSL 720
           KEATEIFN+                   NRSKDAYELFVNLSKKGVLLKKSSLFRLVSSL
Sbjct: 700 KEATEIFNSLEVKTVDSYSAMINGYCAANRSKDAYELFVNLSKKGVLLKKSSLFRLVSSL 759

Query: 721 CMDDSNDRAIKVIKRLSIINVEANEIVYNKVIASLCRAGNMKMAQCLFDCLICAGLTPDL 780
           CMDDSNDRAIKVIKRLSIINVEANEIVYNKVIASLCRAGNMKMAQCLFDCLICAGLTPDL
Sbjct: 760 CMDDSNDRAIKVIKRLSIINVEANEIVYNKVIASLCRAGNMKMAQCLFDCLICAGLTPDL 798

Query: 781 KTYTTMINGYCKINFLREAYELLCDMKIRGRKPDIFIYTVLLDGQFKTRLRGLCSSVDLR 840
           KTYTTMINGYCKINFLREAYELLCDMKIRGRKPDIFIYTVLLDGQFKTRLRGLCSSVDLR
Sbjct: 820 KTYTTMINGYCKINFLREAYELLCDMKIRGRKPDIFIYTVLLDGQFKTRLRGLCSSVDLR 798

Query: 841 GAKQETAFTSTIFDEMEDMKITPDVICYTVLIDGYCKMNNLNDAIVLLEKMVDQGIMPDT 900
           GAKQETAFTSTIFDEMEDMKITPDVICYTVLIDGYCKMNNLNDAIVLLEKMVDQGIMPDT
Sbjct: 880 GAKQETAFTSTIFDEMEDMKITPDVICYTVLIDGYCKMNNLNDAIVLLEKMVDQGIMPDT 798

Query: 901 VTYTTLVSGFCRSGDVEKAVTLFDDMLSKGVLPDAFFISVVSRKFK 927
           VTYTTLVSGFCRSGDVEKAVTLFDDMLSKGVLPDAFFISVVSR  K
Sbjct: 940 VTYTTLVSGFCRSGDVEKAVTLFDDMLSKGVLPDAFFISVVSRYSK 798

[Close]

BLAST of Cp4.1LG04g08950.1 vs. NCBI nr
Match: KAG7021744.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1349 bits (3492), Expect = 0.0
Identity = 723/946 (76.43%), Postives = 731/946 (77.27%), Query Frame = 0


Query: 1   SDDEQITTSFNTTSHVQFNPSKVIQILESLRREPNSAFSFFHKLEERGFRHNISTYAALI 60
           SDDEQIT S NTTSH+QFNPSKVIQILESLRREPNSAFSFFHKLEERGFRHNISTYAALI
Sbjct: 116 SDDEQITISLNTTSHIQFNPSKVIQILESLRREPNSAFSFFHKLEERGFRHNISTYAALI 175

Query: 61  RILCSWGLERKLDSLFLNLIGSEKTEFDILDLLESLNQGYVMDGSFIRAYDALIKAYVSV 120
           RILCSWGLERKLDSLFLNLIGSEKTEFD+LD LESLNQGYVMDGSFIRAYD+LIKAYVSV
Sbjct: 176 RILCSWGLERKLDSLFLNLIGSEKTEFDVLDFLESLNQGYVMDGSFIRAYDSLIKAYVSV 235

Query: 121 SLFDSAVDLLFRSERKGFVPHIFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPNDYTY 180
           SLFDSAVDLLFRSERKGFVPHIFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPNDYTY
Sbjct: 236 SLFDSAVDLLFRSERKGFVPHIFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPNDYTY 295

Query: 181 AIVIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRA 240
           AIVIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRA
Sbjct: 296 AIVIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRA 355

Query: 241 AQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVPDAQTYGVLINGYCKMLKLQK 300
           AQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVP+AQTYGVLINGYCKMLKLQK
Sbjct: 356 AQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVPNAQTYGVLINGYCKMLKLQK 415

Query: 301 ALSLHSFMLSKEVVNQFKVFQDEGVFFDKVAYNIVVHALCEQGKLEEAMELLEDMTSRQI 360
           ALSLHSFMLSK                                                 
Sbjct: 416 ALSLHSFMLSK------------------------------------------------- 475

Query: 361 QMDVVHYTTMIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQ 420
                                                                       
Sbjct: 476 ------------------------------------------------------------ 535

Query: 421 LLQDWRAAQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVPDAQTYGVLINGYC 480
                                                                       
Sbjct: 536 ------------------------------------------------------------ 595

Query: 481 KMLKLQKALSLHSFMLSKGIKTNCVIVSSILQCLIRMQMYSEVVNQFKVFQDEGVFFDKV 540
                             GIKTNCVIVSSILQCLIRMQMYSEVVNQFKVFQDEGVFFDKV
Sbjct: 596 ------------------GIKTNCVIVSSILQCLIRMQMYSEVVNQFKVFQDEGVFFDKV 655

Query: 541 AYNIVVHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKGFFVQGKIYEAMTMFENL 600
           AYNIVVHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKGFFVQGKIYEAMTMFENL
Sbjct: 656 AYNIVVHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKGFFVQGKIYEAMTMFENL 715

Query: 601 KKNGIEPDTITYNVLAAGLSRNGLVSEVKDLLDYMDEHSLREDPKISNLIIENLCIGGKV 660
           KKNGIEPDTITYNVLAAGLSRNGLVSEVKDLLDYMDEH LREDPKISNLIIENLCIGGKV
Sbjct: 716 KKNGIEPDTITYNVLAAGLSRNGLVSEVKDLLDYMDEHGLREDPKISNLIIENLCIGGKV 775

Query: 661 KEATEIFNT-------------------NRSKDAYELFVNLSKKGVLLKKSSLFRLVSSL 720
           KEATEIFN+                   NR+KDAYELFVNLSKKGVLLKKSSLFRLVSSL
Sbjct: 776 KEATEIFNSLEVKTVDNYSAMINGYCAANRTKDAYELFVNLSKKGVLLKKSSLFRLVSSL 835

Query: 721 CMDDSNDRAIKVIKRLSIINVEANEIVYNKVIASLCRAGNMKMAQCLFDCLICAGLTPDL 780
           CM+DSNDRAIKVIKRLSIINVEANEIVYNKVIASLCRAGNMKMAQCLFDCLICAGLTPDL
Sbjct: 836 CMEDSNDRAIKVIKRLSIINVEANEIVYNKVIASLCRAGNMKMAQCLFDCLICAGLTPDL 874

Query: 781 KTYTTMINGYCKINFLREAYELLCDMKIRGRKPDIFIYTVLLDGQFKTRLRGLCSSVDLR 840
           KTYT MINGYCKINFLREAYELLCDMK RGRKPDIFIYTVLLDGQFKTRLRGLCS+VDLR
Sbjct: 896 KTYTMMINGYCKINFLREAYELLCDMKNRGRKPDIFIYTVLLDGQFKTRLRGLCSAVDLR 874

Query: 841 GAKQETAFTSTIFDEMEDMKITPDVICYTVLIDGYCKMNNLNDAIVLLEKMVDQGIMPDT 900
           GAKQETAFTS IFDEMEDMKITPDVICYTVLIDGYCKMNNLNDAIVLLEKMVDQGIMPDT
Sbjct: 956 GAKQETAFTSRIFDEMEDMKITPDVICYTVLIDGYCKMNNLNDAIVLLEKMVDQGIMPDT 874

Query: 901 VTYTTLVSGFCRSGDVEKAVTLFDDMLSKGVLPDAFFISVVSRKFK 927
           VTYTTLVSGFCRSGDVEKAVTLFDDMLSKGVLPDAFFISVVSR  K
Sbjct: 1016 VTYTTLVSGFCRSGDVEKAVTLFDDMLSKGVLPDAFFISVVSRYSK 874

[Close]

BLAST of Cp4.1LG04g08950.1 vs. NCBI nr
Match: KAG6587854.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1347 bits (3486), Expect = 0.0
Identity = 722/943 (76.56%), Postives = 730/943 (77.41%), Query Frame = 0


Query: 1   SDDEQITTSFNTTSHVQFNPSKVIQILESLRREPNSAFSFFHKLEERGFRHNISTYAALI 60
           SDDEQIT S NTTSH+QFNPSKVIQILESLRREPNSAFSFFHKLEERGFRHNISTYAALI
Sbjct: 40  SDDEQITISLNTTSHIQFNPSKVIQILESLRREPNSAFSFFHKLEERGFRHNISTYAALI 99

Query: 61  RILCSWGLERKLDSLFLNLIGSEKTEFDILDLLESLNQGYVMDGSFIRAYDALIKAYVSV 120
           RILCSWGLERKLDSLFLNLIGSEKTEFD+LDLLESLNQGYVMDGSFIRAYD+LIKAYVSV
Sbjct: 100 RILCSWGLERKLDSLFLNLIGSEKTEFDVLDLLESLNQGYVMDGSFIRAYDSLIKAYVSV 159

Query: 121 SLFDSAVDLLFRSERKGFVPHIFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPNDYTY 180
           SLFDSAVDLLFRSERKGFVPHIFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPNDYTY
Sbjct: 160 SLFDSAVDLLFRSERKGFVPHIFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPNDYTY 219

Query: 181 AIVIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRA 240
           AIVIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRA
Sbjct: 220 AIVIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRA 279

Query: 241 AQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVPDAQTYGVLINGYCKMLKLQK 300
           AQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVP+AQTYGVLINGYCKMLKLQK
Sbjct: 280 AQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVPNAQTYGVLINGYCKMLKLQK 339

Query: 301 ALSLHSFMLSKEVVNQFKVFQDEGVFFDKVAYNIVVHALCEQGKLEEAMELLEDMTSRQI 360
           ALSLHSFMLSK                                                 
Sbjct: 340 ALSLHSFMLSK------------------------------------------------- 399

Query: 361 QMDVVHYTTMIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQ 420
                                                                       
Sbjct: 400 ------------------------------------------------------------ 459

Query: 421 LLQDWRAAQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVPDAQTYGVLINGYC 480
                                                                       
Sbjct: 460 ------------------------------------------------------------ 519

Query: 481 KMLKLQKALSLHSFMLSKGIKTNCVIVSSILQCLIRMQMYSEVVNQFKVFQDEGVFFDKV 540
                             GIKTNCVIVSSILQCLIRMQMYSEVVNQFKVFQDEGVFFDKV
Sbjct: 520 ------------------GIKTNCVIVSSILQCLIRMQMYSEVVNQFKVFQDEGVFFDKV 579

Query: 541 AYNIVVHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKGFFVQGKIYEAMTMFENL 600
           AYNIVVHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKGFFVQGKIYEAMTMFENL
Sbjct: 580 AYNIVVHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKGFFVQGKIYEAMTMFENL 639

Query: 601 KKNGIEPDTITYNVLAAGLSRNGLVSEVKDLLDYMDEHSLREDPKISNLIIENLCIGGKV 660
           KKNGIEPDTITYNVLAAGLSRNGLVSEVKDLLDYMDEH LREDPKISNLIIENLCIGGKV
Sbjct: 640 KKNGIEPDTITYNVLAAGLSRNGLVSEVKDLLDYMDEHGLREDPKISNLIIENLCIGGKV 699

Query: 661 KEATEIFNT-------------------NRSKDAYELFVNLSKKGVLLKKSSLFRLVSSL 720
           KEATEIFN+                   NR+KDAYELFVNLSKKGVLLKKSSLFRLVSSL
Sbjct: 700 KEATEIFNSLEVKTVDNYSAMINGYCAANRTKDAYELFVNLSKKGVLLKKSSLFRLVSSL 759

Query: 721 CMDDSNDRAIKVIKRLSIINVEANEIVYNKVIASLCRAGNMKMAQCLFDCLICAGLTPDL 780
           CM+DSNDRAIKVIKRLSIINVEANEIVYNKVIASLCRAGNMKMAQCLFDCLICAGLTPDL
Sbjct: 760 CMEDSNDRAIKVIKRLSIINVEANEIVYNKVIASLCRAGNMKMAQCLFDCLICAGLTPDL 795

Query: 781 KTYTTMINGYCKINFLREAYELLCDMKIRGRKPDIFIYTVLLDGQFKTRLRGLCSSVDLR 840
           KTYT MINGYCKINFLREAYELLCDMK RGRKPDIFIYTVLLDGQFKTRLRGLCS+VDLR
Sbjct: 820 KTYTMMINGYCKINFLREAYELLCDMKNRGRKPDIFIYTVLLDGQFKTRLRGLCSAVDLR 795

Query: 841 GAKQETAFTSTIFDEMEDMKITPDVICYTVLIDGYCKMNNLNDAIVLLEKMVDQGIMPDT 900
           GAKQETAFTS IFDEMEDMKITPDVIC TVLIDGYCKMNNLNDAIVLLEKMVDQGIMPDT
Sbjct: 880 GAKQETAFTSRIFDEMEDMKITPDVICCTVLIDGYCKMNNLNDAIVLLEKMVDQGIMPDT 795

Query: 901 VTYTTLVSGFCRSGDVEKAVTLFDDMLSKGVLPDAFFISVVSR 924
           VTYTTLVSGFCRSGDVEKAVTLFDDMLSKGVLPDAFFISVVSR
Sbjct: 940 VTYTTLVSGFCRSGDVEKAVTLFDDMLSKGVLPDAFFISVVSR 795

[Close]

BLAST of Cp4.1LG04g08950.1 vs. NCBI nr
Match: XP_022932080.1 (pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 1344 bits (3478), Expect = 0.0
Identity = 721/946 (76.22%), Postives = 730/946 (77.17%), Query Frame = 0


Query: 1   SDDEQITTSFNTTSHVQFNPSKVIQILESLRREPNSAFSFFHKLEERGFRHNISTYAALI 60
           SDDEQIT S NTTSH+QFNPSKVIQILESLRREPNSAFSFFHKLEERGF HNISTYAALI
Sbjct: 15  SDDEQITISLNTTSHIQFNPSKVIQILESLRREPNSAFSFFHKLEERGFCHNISTYAALI 74

Query: 61  RILCSWGLERKLDSLFLNLIGSEKTEFDILDLLESLNQGYVMDGSFIRAYDALIKAYVSV 120
           RILCSWGLERKLDSLFLNLIGSEKTEFD+LDLLESLNQGYVMDGSFIRAYD+LIKAYVSV
Sbjct: 75  RILCSWGLERKLDSLFLNLIGSEKTEFDVLDLLESLNQGYVMDGSFIRAYDSLIKAYVSV 134

Query: 121 SLFDSAVDLLFRSERKGFVPHIFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPNDYTY 180
           SLFDSAVDLLFRSERKGFVPHIFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPNDYTY
Sbjct: 135 SLFDSAVDLLFRSERKGFVPHIFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPNDYTY 194

Query: 181 AIVIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRA 240
           AIVIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRA
Sbjct: 195 AIVIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRA 254

Query: 241 AQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVPDAQTYGVLINGYCKMLKLQK 300
           AQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVP+AQTYGVLINGYCKMLKLQK
Sbjct: 255 AQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVPNAQTYGVLINGYCKMLKLQK 314

Query: 301 ALSLHSFMLSKEVVNQFKVFQDEGVFFDKVAYNIVVHALCEQGKLEEAMELLEDMTSRQI 360
           ALSLHSFMLSK                                                 
Sbjct: 315 ALSLHSFMLSK------------------------------------------------- 374

Query: 361 QMDVVHYTTMIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQ 420
                                                                       
Sbjct: 375 ------------------------------------------------------------ 434

Query: 421 LLQDWRAAQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVPDAQTYGVLINGYC 480
                                                                       
Sbjct: 435 ------------------------------------------------------------ 494

Query: 481 KMLKLQKALSLHSFMLSKGIKTNCVIVSSILQCLIRMQMYSEVVNQFKVFQDEGVFFDKV 540
                             GIKTNCVIVSSILQCLIRMQMYSEVVNQFKVFQDEGVFFDKV
Sbjct: 495 ------------------GIKTNCVIVSSILQCLIRMQMYSEVVNQFKVFQDEGVFFDKV 554

Query: 541 AYNIVVHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKGFFVQGKIYEAMTMFENL 600
           AYNIVVHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKGFFVQGKIYEAMTMFENL
Sbjct: 555 AYNIVVHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKGFFVQGKIYEAMTMFENL 614

Query: 601 KKNGIEPDTITYNVLAAGLSRNGLVSEVKDLLDYMDEHSLREDPKISNLIIENLCIGGKV 660
           KKNGIEPDTITYNVLAAGLSRNGLVSEVK+LLDYMDEH LREDPKISNLIIENLCIGGKV
Sbjct: 615 KKNGIEPDTITYNVLAAGLSRNGLVSEVKNLLDYMDEHGLREDPKISNLIIENLCIGGKV 674

Query: 661 KEATEIFNT-------------------NRSKDAYELFVNLSKKGVLLKKSSLFRLVSSL 720
           KEATEIFN+                   NR+KDAYELFVNLSKKGVLLKKSSLFRLVSSL
Sbjct: 675 KEATEIFNSLEVKTVDNYSAMINGYCAANRTKDAYELFVNLSKKGVLLKKSSLFRLVSSL 734

Query: 721 CMDDSNDRAIKVIKRLSIINVEANEIVYNKVIASLCRAGNMKMAQCLFDCLICAGLTPDL 780
           CM+DSNDRAIKVIKRLSIINVEANEIVYNKVIASLCRAGNMKMAQCLFDCLICAGLTPDL
Sbjct: 735 CMEDSNDRAIKVIKRLSIINVEANEIVYNKVIASLCRAGNMKMAQCLFDCLICAGLTPDL 773

Query: 781 KTYTTMINGYCKINFLREAYELLCDMKIRGRKPDIFIYTVLLDGQFKTRLRGLCSSVDLR 840
           KTYT MINGYCKINFLREAYELLCDMK RGRKPDIFIYTVLLDGQFKTRLRGLCS+VDLR
Sbjct: 795 KTYTMMINGYCKINFLREAYELLCDMKNRGRKPDIFIYTVLLDGQFKTRLRGLCSAVDLR 773

Query: 841 GAKQETAFTSTIFDEMEDMKITPDVICYTVLIDGYCKMNNLNDAIVLLEKMVDQGIMPDT 900
           GAKQETAFTS IFDEMEDMKITPDVICYTVLIDGYCKMNNLNDAIVLLEKMVDQGIMPDT
Sbjct: 855 GAKQETAFTSRIFDEMEDMKITPDVICYTVLIDGYCKMNNLNDAIVLLEKMVDQGIMPDT 773

Query: 901 VTYTTLVSGFCRSGDVEKAVTLFDDMLSKGVLPDAFFISVVSRKFK 927
           VTYTTLVSGFCRSGDVEKAV LFDDMLSKGVLPDAFFISVVSR  K
Sbjct: 915 VTYTTLVSGFCRSGDVEKAVALFDDMLSKGVLPDAFFISVVSRYSK 773

[Close]

BLAST of Cp4.1LG04g08950.1 vs. NCBI nr
Match: XP_022932065.1 (pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 1344 bits (3478), Expect = 0.0
Identity = 721/946 (76.22%), Postives = 730/946 (77.17%), Query Frame = 0


Query: 1   SDDEQITTSFNTTSHVQFNPSKVIQILESLRREPNSAFSFFHKLEERGFRHNISTYAALI 60
           SDDEQIT S NTTSH+QFNPSKVIQILESLRREPNSAFSFFHKLEERGF HNISTYAALI
Sbjct: 40  SDDEQITISLNTTSHIQFNPSKVIQILESLRREPNSAFSFFHKLEERGFCHNISTYAALI 99

Query: 61  RILCSWGLERKLDSLFLNLIGSEKTEFDILDLLESLNQGYVMDGSFIRAYDALIKAYVSV 120
           RILCSWGLERKLDSLFLNLIGSEKTEFD+LDLLESLNQGYVMDGSFIRAYD+LIKAYVSV
Sbjct: 100 RILCSWGLERKLDSLFLNLIGSEKTEFDVLDLLESLNQGYVMDGSFIRAYDSLIKAYVSV 159

Query: 121 SLFDSAVDLLFRSERKGFVPHIFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPNDYTY 180
           SLFDSAVDLLFRSERKGFVPHIFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPNDYTY
Sbjct: 160 SLFDSAVDLLFRSERKGFVPHIFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPNDYTY 219

Query: 181 AIVIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRA 240
           AIVIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRA
Sbjct: 220 AIVIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRA 279

Query: 241 AQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVPDAQTYGVLINGYCKMLKLQK 300
           AQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVP+AQTYGVLINGYCKMLKLQK
Sbjct: 280 AQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVPNAQTYGVLINGYCKMLKLQK 339

Query: 301 ALSLHSFMLSKEVVNQFKVFQDEGVFFDKVAYNIVVHALCEQGKLEEAMELLEDMTSRQI 360
           ALSLHSFMLSK                                                 
Sbjct: 340 ALSLHSFMLSK------------------------------------------------- 399

Query: 361 QMDVVHYTTMIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQ 420
                                                                       
Sbjct: 400 ------------------------------------------------------------ 459

Query: 421 LLQDWRAAQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVPDAQTYGVLINGYC 480
                                                                       
Sbjct: 460 ------------------------------------------------------------ 519

Query: 481 KMLKLQKALSLHSFMLSKGIKTNCVIVSSILQCLIRMQMYSEVVNQFKVFQDEGVFFDKV 540
                             GIKTNCVIVSSILQCLIRMQMYSEVVNQFKVFQDEGVFFDKV
Sbjct: 520 ------------------GIKTNCVIVSSILQCLIRMQMYSEVVNQFKVFQDEGVFFDKV 579

Query: 541 AYNIVVHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKGFFVQGKIYEAMTMFENL 600
           AYNIVVHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKGFFVQGKIYEAMTMFENL
Sbjct: 580 AYNIVVHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKGFFVQGKIYEAMTMFENL 639

Query: 601 KKNGIEPDTITYNVLAAGLSRNGLVSEVKDLLDYMDEHSLREDPKISNLIIENLCIGGKV 660
           KKNGIEPDTITYNVLAAGLSRNGLVSEVK+LLDYMDEH LREDPKISNLIIENLCIGGKV
Sbjct: 640 KKNGIEPDTITYNVLAAGLSRNGLVSEVKNLLDYMDEHGLREDPKISNLIIENLCIGGKV 699

Query: 661 KEATEIFNT-------------------NRSKDAYELFVNLSKKGVLLKKSSLFRLVSSL 720
           KEATEIFN+                   NR+KDAYELFVNLSKKGVLLKKSSLFRLVSSL
Sbjct: 700 KEATEIFNSLEVKTVDNYSAMINGYCAANRTKDAYELFVNLSKKGVLLKKSSLFRLVSSL 759

Query: 721 CMDDSNDRAIKVIKRLSIINVEANEIVYNKVIASLCRAGNMKMAQCLFDCLICAGLTPDL 780
           CM+DSNDRAIKVIKRLSIINVEANEIVYNKVIASLCRAGNMKMAQCLFDCLICAGLTPDL
Sbjct: 760 CMEDSNDRAIKVIKRLSIINVEANEIVYNKVIASLCRAGNMKMAQCLFDCLICAGLTPDL 798

Query: 781 KTYTTMINGYCKINFLREAYELLCDMKIRGRKPDIFIYTVLLDGQFKTRLRGLCSSVDLR 840
           KTYT MINGYCKINFLREAYELLCDMK RGRKPDIFIYTVLLDGQFKTRLRGLCS+VDLR
Sbjct: 820 KTYTMMINGYCKINFLREAYELLCDMKNRGRKPDIFIYTVLLDGQFKTRLRGLCSAVDLR 798

Query: 841 GAKQETAFTSTIFDEMEDMKITPDVICYTVLIDGYCKMNNLNDAIVLLEKMVDQGIMPDT 900
           GAKQETAFTS IFDEMEDMKITPDVICYTVLIDGYCKMNNLNDAIVLLEKMVDQGIMPDT
Sbjct: 880 GAKQETAFTSRIFDEMEDMKITPDVICYTVLIDGYCKMNNLNDAIVLLEKMVDQGIMPDT 798

Query: 901 VTYTTLVSGFCRSGDVEKAVTLFDDMLSKGVLPDAFFISVVSRKFK 927
           VTYTTLVSGFCRSGDVEKAV LFDDMLSKGVLPDAFFISVVSR  K
Sbjct: 940 VTYTTLVSGFCRSGDVEKAVALFDDMLSKGVLPDAFFISVVSRYSK 798

[Close]

BLAST of Cp4.1LG04g08950.1 vs. ExPASy TrEMBL
Match: A0A6J1F176 (pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111438390 PE=4 SV=1)

HSP 1 Score: 1344 bits (3478), Expect = 0.0
Identity = 721/946 (76.22%), Postives = 730/946 (77.17%), Query Frame = 0


Query: 1   SDDEQITTSFNTTSHVQFNPSKVIQILESLRREPNSAFSFFHKLEERGFRHNISTYAALI 60
           SDDEQIT S NTTSH+QFNPSKVIQILESLRREPNSAFSFFHKLEERGF HNISTYAALI
Sbjct: 15  SDDEQITISLNTTSHIQFNPSKVIQILESLRREPNSAFSFFHKLEERGFCHNISTYAALI 74

Query: 61  RILCSWGLERKLDSLFLNLIGSEKTEFDILDLLESLNQGYVMDGSFIRAYDALIKAYVSV 120
           RILCSWGLERKLDSLFLNLIGSEKTEFD+LDLLESLNQGYVMDGSFIRAYD+LIKAYVSV
Sbjct: 75  RILCSWGLERKLDSLFLNLIGSEKTEFDVLDLLESLNQGYVMDGSFIRAYDSLIKAYVSV 134

Query: 121 SLFDSAVDLLFRSERKGFVPHIFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPNDYTY 180
           SLFDSAVDLLFRSERKGFVPHIFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPNDYTY
Sbjct: 135 SLFDSAVDLLFRSERKGFVPHIFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPNDYTY 194

Query: 181 AIVIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRA 240
           AIVIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRA
Sbjct: 195 AIVIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRA 254

Query: 241 AQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVPDAQTYGVLINGYCKMLKLQK 300
           AQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVP+AQTYGVLINGYCKMLKLQK
Sbjct: 255 AQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVPNAQTYGVLINGYCKMLKLQK 314

Query: 301 ALSLHSFMLSKEVVNQFKVFQDEGVFFDKVAYNIVVHALCEQGKLEEAMELLEDMTSRQI 360
           ALSLHSFMLSK                                                 
Sbjct: 315 ALSLHSFMLSK------------------------------------------------- 374

Query: 361 QMDVVHYTTMIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQ 420
                                                                       
Sbjct: 375 ------------------------------------------------------------ 434

Query: 421 LLQDWRAAQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVPDAQTYGVLINGYC 480
                                                                       
Sbjct: 435 ------------------------------------------------------------ 494

Query: 481 KMLKLQKALSLHSFMLSKGIKTNCVIVSSILQCLIRMQMYSEVVNQFKVFQDEGVFFDKV 540
                             GIKTNCVIVSSILQCLIRMQMYSEVVNQFKVFQDEGVFFDKV
Sbjct: 495 ------------------GIKTNCVIVSSILQCLIRMQMYSEVVNQFKVFQDEGVFFDKV 554

Query: 541 AYNIVVHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKGFFVQGKIYEAMTMFENL 600
           AYNIVVHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKGFFVQGKIYEAMTMFENL
Sbjct: 555 AYNIVVHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKGFFVQGKIYEAMTMFENL 614

Query: 601 KKNGIEPDTITYNVLAAGLSRNGLVSEVKDLLDYMDEHSLREDPKISNLIIENLCIGGKV 660
           KKNGIEPDTITYNVLAAGLSRNGLVSEVK+LLDYMDEH LREDPKISNLIIENLCIGGKV
Sbjct: 615 KKNGIEPDTITYNVLAAGLSRNGLVSEVKNLLDYMDEHGLREDPKISNLIIENLCIGGKV 674

Query: 661 KEATEIFNT-------------------NRSKDAYELFVNLSKKGVLLKKSSLFRLVSSL 720
           KEATEIFN+                   NR+KDAYELFVNLSKKGVLLKKSSLFRLVSSL
Sbjct: 675 KEATEIFNSLEVKTVDNYSAMINGYCAANRTKDAYELFVNLSKKGVLLKKSSLFRLVSSL 734

Query: 721 CMDDSNDRAIKVIKRLSIINVEANEIVYNKVIASLCRAGNMKMAQCLFDCLICAGLTPDL 780
           CM+DSNDRAIKVIKRLSIINVEANEIVYNKVIASLCRAGNMKMAQCLFDCLICAGLTPDL
Sbjct: 735 CMEDSNDRAIKVIKRLSIINVEANEIVYNKVIASLCRAGNMKMAQCLFDCLICAGLTPDL 773

Query: 781 KTYTTMINGYCKINFLREAYELLCDMKIRGRKPDIFIYTVLLDGQFKTRLRGLCSSVDLR 840
           KTYT MINGYCKINFLREAYELLCDMK RGRKPDIFIYTVLLDGQFKTRLRGLCS+VDLR
Sbjct: 795 KTYTMMINGYCKINFLREAYELLCDMKNRGRKPDIFIYTVLLDGQFKTRLRGLCSAVDLR 773

Query: 841 GAKQETAFTSTIFDEMEDMKITPDVICYTVLIDGYCKMNNLNDAIVLLEKMVDQGIMPDT 900
           GAKQETAFTS IFDEMEDMKITPDVICYTVLIDGYCKMNNLNDAIVLLEKMVDQGIMPDT
Sbjct: 855 GAKQETAFTSRIFDEMEDMKITPDVICYTVLIDGYCKMNNLNDAIVLLEKMVDQGIMPDT 773

Query: 901 VTYTTLVSGFCRSGDVEKAVTLFDDMLSKGVLPDAFFISVVSRKFK 927
           VTYTTLVSGFCRSGDVEKAV LFDDMLSKGVLPDAFFISVVSR  K
Sbjct: 915 VTYTTLVSGFCRSGDVEKAVALFDDMLSKGVLPDAFFISVVSRYSK 773

[Close]

BLAST of Cp4.1LG04g08950.1 vs. ExPASy TrEMBL
Match: A0A6J1EVM2 (pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111438390 PE=4 SV=1)

HSP 1 Score: 1344 bits (3478), Expect = 0.0
Identity = 721/946 (76.22%), Postives = 730/946 (77.17%), Query Frame = 0


Query: 1   SDDEQITTSFNTTSHVQFNPSKVIQILESLRREPNSAFSFFHKLEERGFRHNISTYAALI 60
           SDDEQIT S NTTSH+QFNPSKVIQILESLRREPNSAFSFFHKLEERGF HNISTYAALI
Sbjct: 40  SDDEQITISLNTTSHIQFNPSKVIQILESLRREPNSAFSFFHKLEERGFCHNISTYAALI 99

Query: 61  RILCSWGLERKLDSLFLNLIGSEKTEFDILDLLESLNQGYVMDGSFIRAYDALIKAYVSV 120
           RILCSWGLERKLDSLFLNLIGSEKTEFD+LDLLESLNQGYVMDGSFIRAYD+LIKAYVSV
Sbjct: 100 RILCSWGLERKLDSLFLNLIGSEKTEFDVLDLLESLNQGYVMDGSFIRAYDSLIKAYVSV 159

Query: 121 SLFDSAVDLLFRSERKGFVPHIFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPNDYTY 180
           SLFDSAVDLLFRSERKGFVPHIFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPNDYTY
Sbjct: 160 SLFDSAVDLLFRSERKGFVPHIFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPNDYTY 219

Query: 181 AIVIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRA 240
           AIVIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRA
Sbjct: 220 AIVIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRA 279

Query: 241 AQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVPDAQTYGVLINGYCKMLKLQK 300
           AQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVP+AQTYGVLINGYCKMLKLQK
Sbjct: 280 AQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVPNAQTYGVLINGYCKMLKLQK 339

Query: 301 ALSLHSFMLSKEVVNQFKVFQDEGVFFDKVAYNIVVHALCEQGKLEEAMELLEDMTSRQI 360
           ALSLHSFMLSK                                                 
Sbjct: 340 ALSLHSFMLSK------------------------------------------------- 399

Query: 361 QMDVVHYTTMIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQ 420
                                                                       
Sbjct: 400 ------------------------------------------------------------ 459

Query: 421 LLQDWRAAQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVPDAQTYGVLINGYC 480
                                                                       
Sbjct: 460 ------------------------------------------------------------ 519

Query: 481 KMLKLQKALSLHSFMLSKGIKTNCVIVSSILQCLIRMQMYSEVVNQFKVFQDEGVFFDKV 540
                             GIKTNCVIVSSILQCLIRMQMYSEVVNQFKVFQDEGVFFDKV
Sbjct: 520 ------------------GIKTNCVIVSSILQCLIRMQMYSEVVNQFKVFQDEGVFFDKV 579

Query: 541 AYNIVVHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKGFFVQGKIYEAMTMFENL 600
           AYNIVVHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKGFFVQGKIYEAMTMFENL
Sbjct: 580 AYNIVVHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKGFFVQGKIYEAMTMFENL 639

Query: 601 KKNGIEPDTITYNVLAAGLSRNGLVSEVKDLLDYMDEHSLREDPKISNLIIENLCIGGKV 660
           KKNGIEPDTITYNVLAAGLSRNGLVSEVK+LLDYMDEH LREDPKISNLIIENLCIGGKV
Sbjct: 640 KKNGIEPDTITYNVLAAGLSRNGLVSEVKNLLDYMDEHGLREDPKISNLIIENLCIGGKV 699

Query: 661 KEATEIFNT-------------------NRSKDAYELFVNLSKKGVLLKKSSLFRLVSSL 720
           KEATEIFN+                   NR+KDAYELFVNLSKKGVLLKKSSLFRLVSSL
Sbjct: 700 KEATEIFNSLEVKTVDNYSAMINGYCAANRTKDAYELFVNLSKKGVLLKKSSLFRLVSSL 759

Query: 721 CMDDSNDRAIKVIKRLSIINVEANEIVYNKVIASLCRAGNMKMAQCLFDCLICAGLTPDL 780
           CM+DSNDRAIKVIKRLSIINVEANEIVYNKVIASLCRAGNMKMAQCLFDCLICAGLTPDL
Sbjct: 760 CMEDSNDRAIKVIKRLSIINVEANEIVYNKVIASLCRAGNMKMAQCLFDCLICAGLTPDL 798

Query: 781 KTYTTMINGYCKINFLREAYELLCDMKIRGRKPDIFIYTVLLDGQFKTRLRGLCSSVDLR 840
           KTYT MINGYCKINFLREAYELLCDMK RGRKPDIFIYTVLLDGQFKTRLRGLCS+VDLR
Sbjct: 820 KTYTMMINGYCKINFLREAYELLCDMKNRGRKPDIFIYTVLLDGQFKTRLRGLCSAVDLR 798

Query: 841 GAKQETAFTSTIFDEMEDMKITPDVICYTVLIDGYCKMNNLNDAIVLLEKMVDQGIMPDT 900
           GAKQETAFTS IFDEMEDMKITPDVICYTVLIDGYCKMNNLNDAIVLLEKMVDQGIMPDT
Sbjct: 880 GAKQETAFTSRIFDEMEDMKITPDVICYTVLIDGYCKMNNLNDAIVLLEKMVDQGIMPDT 798

Query: 901 VTYTTLVSGFCRSGDVEKAVTLFDDMLSKGVLPDAFFISVVSRKFK 927
           VTYTTLVSGFCRSGDVEKAV LFDDMLSKGVLPDAFFISVVSR  K
Sbjct: 940 VTYTTLVSGFCRSGDVEKAVALFDDMLSKGVLPDAFFISVVSRYSK 798

[Close]

BLAST of Cp4.1LG04g08950.1 vs. ExPASy TrEMBL
Match: A0A6J1F161 (pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111438390 PE=4 SV=1)

HSP 1 Score: 1344 bits (3478), Expect = 0.0
Identity = 721/946 (76.22%), Postives = 730/946 (77.17%), Query Frame = 0


Query: 1   SDDEQITTSFNTTSHVQFNPSKVIQILESLRREPNSAFSFFHKLEERGFRHNISTYAALI 60
           SDDEQIT S NTTSH+QFNPSKVIQILESLRREPNSAFSFFHKLEERGF HNISTYAALI
Sbjct: 40  SDDEQITISLNTTSHIQFNPSKVIQILESLRREPNSAFSFFHKLEERGFCHNISTYAALI 99

Query: 61  RILCSWGLERKLDSLFLNLIGSEKTEFDILDLLESLNQGYVMDGSFIRAYDALIKAYVSV 120
           RILCSWGLERKLDSLFLNLIGSEKTEFD+LDLLESLNQGYVMDGSFIRAYD+LIKAYVSV
Sbjct: 100 RILCSWGLERKLDSLFLNLIGSEKTEFDVLDLLESLNQGYVMDGSFIRAYDSLIKAYVSV 159

Query: 121 SLFDSAVDLLFRSERKGFVPHIFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPNDYTY 180
           SLFDSAVDLLFRSERKGFVPHIFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPNDYTY
Sbjct: 160 SLFDSAVDLLFRSERKGFVPHIFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPNDYTY 219

Query: 181 AIVIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRA 240
           AIVIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRA
Sbjct: 220 AIVIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRA 279

Query: 241 AQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVPDAQTYGVLINGYCKMLKLQK 300
           AQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVP+AQTYGVLINGYCKMLKLQK
Sbjct: 280 AQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVPNAQTYGVLINGYCKMLKLQK 339

Query: 301 ALSLHSFMLSKEVVNQFKVFQDEGVFFDKVAYNIVVHALCEQGKLEEAMELLEDMTSRQI 360
           ALSLHSFMLSK                                                 
Sbjct: 340 ALSLHSFMLSK------------------------------------------------- 399

Query: 361 QMDVVHYTTMIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQ 420
                                                                       
Sbjct: 400 ------------------------------------------------------------ 459

Query: 421 LLQDWRAAQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVPDAQTYGVLINGYC 480
                                                                       
Sbjct: 460 ------------------------------------------------------------ 519

Query: 481 KMLKLQKALSLHSFMLSKGIKTNCVIVSSILQCLIRMQMYSEVVNQFKVFQDEGVFFDKV 540
                             GIKTNCVIVSSILQCLIRMQMYSEVVNQFKVFQDEGVFFDKV
Sbjct: 520 ------------------GIKTNCVIVSSILQCLIRMQMYSEVVNQFKVFQDEGVFFDKV 579

Query: 541 AYNIVVHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKGFFVQGKIYEAMTMFENL 600
           AYNIVVHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKGFFVQGKIYEAMTMFENL
Sbjct: 580 AYNIVVHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKGFFVQGKIYEAMTMFENL 639

Query: 601 KKNGIEPDTITYNVLAAGLSRNGLVSEVKDLLDYMDEHSLREDPKISNLIIENLCIGGKV 660
           KKNGIEPDTITYNVLAAGLSRNGLVSEVK+LLDYMDEH LREDPKISNLIIENLCIGGKV
Sbjct: 640 KKNGIEPDTITYNVLAAGLSRNGLVSEVKNLLDYMDEHGLREDPKISNLIIENLCIGGKV 699

Query: 661 KEATEIFNT-------------------NRSKDAYELFVNLSKKGVLLKKSSLFRLVSSL 720
           KEATEIFN+                   NR+KDAYELFVNLSKKGVLLKKSSLFRLVSSL
Sbjct: 700 KEATEIFNSLEVKTVDNYSAMINGYCAANRTKDAYELFVNLSKKGVLLKKSSLFRLVSSL 759

Query: 721 CMDDSNDRAIKVIKRLSIINVEANEIVYNKVIASLCRAGNMKMAQCLFDCLICAGLTPDL 780
           CM+DSNDRAIKVIKRLSIINVEANEIVYNKVIASLCRAGNMKMAQCLFDCLICAGLTPDL
Sbjct: 760 CMEDSNDRAIKVIKRLSIINVEANEIVYNKVIASLCRAGNMKMAQCLFDCLICAGLTPDL 798

Query: 781 KTYTTMINGYCKINFLREAYELLCDMKIRGRKPDIFIYTVLLDGQFKTRLRGLCSSVDLR 840
           KTYT MINGYCKINFLREAYELLCDMK RGRKPDIFIYTVLLDGQFKTRLRGLCS+VDLR
Sbjct: 820 KTYTMMINGYCKINFLREAYELLCDMKNRGRKPDIFIYTVLLDGQFKTRLRGLCSAVDLR 798

Query: 841 GAKQETAFTSTIFDEMEDMKITPDVICYTVLIDGYCKMNNLNDAIVLLEKMVDQGIMPDT 900
           GAKQETAFTS IFDEMEDMKITPDVICYTVLIDGYCKMNNLNDAIVLLEKMVDQGIMPDT
Sbjct: 880 GAKQETAFTSRIFDEMEDMKITPDVICYTVLIDGYCKMNNLNDAIVLLEKMVDQGIMPDT 798

Query: 901 VTYTTLVSGFCRSGDVEKAVTLFDDMLSKGVLPDAFFISVVSRKFK 927
           VTYTTLVSGFCRSGDVEKAV LFDDMLSKGVLPDAFFISVVSR  K
Sbjct: 940 VTYTTLVSGFCRSGDVEKAVALFDDMLSKGVLPDAFFISVVSRYSK 798

[Close]

BLAST of Cp4.1LG04g08950.1 vs. ExPASy TrEMBL
Match: A0A6J1JGR8 (pentatricopeptide repeat-containing protein At2g26790, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111484960 PE=4 SV=1)

HSP 1 Score: 1151 bits (2978), Expect = 0.0
Identity = 622/941 (66.10%), Postives = 672/941 (71.41%), Query Frame = 0


Query: 1   SDDEQITTSFNTTSHVQFNPSKVIQILESLRREPNSAFSFFHKLEERGFRHNISTYAALI 60
           SDDEQ TT F+TT  VQFNPSKV+QIL SLRREP  AFSFF +LEERGF+HNISTYAALI
Sbjct: 40  SDDEQSTTFFHTTLPVQFNPSKVVQILGSLRREPKIAFSFFRELEERGFQHNISTYAALI 99

Query: 61  RILCSWGLERKLDSLFLNLIGSEKTEFDILDLLESLNQGYVMDGSFIRAYDALIKAYVSV 120
           RILCSWGLERKL+SLFLNLI S+K EFD+LDLLESLNQGY + GSF RAYDALIKAYVSV
Sbjct: 100 RILCSWGLERKLESLFLNLIESKKMEFDVLDLLESLNQGYAVGGSFTRAYDALIKAYVSV 159

Query: 121 SLFDSAVDLLFRSERKGFVPHIFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPNDYTY 180
           SLFDSAVDLLFRSERKGFVPHIFTCNFLLNRL EHGK+NMAL VYKQLKRFGFHPNDYTY
Sbjct: 160 SLFDSAVDLLFRSERKGFVPHIFTCNFLLNRLTEHGKMNMALVVYKQLKRFGFHPNDYTY 219

Query: 181 AIVIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRA 240
           AIVIKALCKMGNMEEAI IFEEMSEAGVV +AFA TAYIEGLCTH CSA  YQLLQ WR 
Sbjct: 220 AIVIKALCKMGNMEEAIYIFEEMSEAGVVASAFAYTAYIEGLCTHHCSASAYQLLQAWRE 279

Query: 241 AQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVPDAQTYGVLINGYCKMLKLQK 300
           AQAPIDVYAYFVVIRGFCEEM++++AENVFL+ME+YGVVPDAQTYGVLINGYCK LKLQK
Sbjct: 280 AQAPIDVYAYFVVIRGFCEEMKIDEAENVFLEMEQYGVVPDAQTYGVLINGYCKKLKLQK 339

Query: 301 ALSLHSFMLSKEVVNQFKVFQDEGVFFDKVAYNIVVHALCEQGKLEEAMELLEDMTSRQI 360
           ALSLHS MLSK                                                 
Sbjct: 340 ALSLHSLMLSK------------------------------------------------- 399

Query: 361 QMDVVHYTTMIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQ 420
                                                                       
Sbjct: 400 ------------------------------------------------------------ 459

Query: 421 LLQDWRAAQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVPDAQTYGVLINGYC 480
                                                                       
Sbjct: 460 ------------------------------------------------------------ 519

Query: 481 KMLKLQKALSLHSFMLSKGIKTNCVIVSSILQCLIRMQMYSEVVNQFKVFQDEGVFFDKV 540
                             GIKTNCVIVSSILQCL+RMQM SEVVNQFKVFQ +GVFFDKV
Sbjct: 520 ------------------GIKTNCVIVSSILQCLLRMQMCSEVVNQFKVFQGKGVFFDKV 579

Query: 541 AYNIVVHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKGFFVQGKIYEAMTMFENL 600
           AYNIVVHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKGFFVQGKI+EAM MFENL
Sbjct: 580 AYNIVVHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKGFFVQGKIHEAMVMFENL 639

Query: 601 KKNGIEPDTITYNVLAAGLSRNGLVSEVKDLLDYMDEHSLREDPKISNLIIENLCIGGKV 660
           KKNGIEPDTITYNVLAAGLSRNGLVS+V+ LLDYM+EH LREDPKI +L+IENLC+GGKV
Sbjct: 640 KKNGIEPDTITYNVLAAGLSRNGLVSKVQGLLDYMEEHGLREDPKILDLVIENLCVGGKV 699

Query: 661 KEATEIFNT-------------------NRSKDAYELFVNLSKKGVLLKKSSLFRLVSSL 720
           KEATE FN+                   N + DAY+LFVNLSKKGV +KKS+L RLVSSL
Sbjct: 700 KEATEFFNSLEVKTVENYSAMINGYCAANHTNDAYDLFVNLSKKGVSIKKSTLSRLVSSL 759

Query: 721 CMDDSNDRAIKVIKRLSIINVEANEIVYNKVIASLCRAGNMKMAQCLFDCLICAGLTPDL 780
           CM+DS+DRAIKVIK+L I++V+AN+IVYN VI+SLCR GNMK AQ LFDCL+CAGLTPDL
Sbjct: 760 CMEDSSDRAIKVIKKLPIMDVKANKIVYNNVISSLCRVGNMKRAQSLFDCLVCAGLTPDL 793

Query: 781 KTYTTMINGYCKINFLREAYELLCDMKIRGRKPDIFIYTVLLDGQFKTRLRGLCSSVDLR 840
            TYT MINGYCKINFLREAYELLCDMK RGRKPDI IYTVLLDG FKTRL+ LCSSV LR
Sbjct: 820 ITYTMMINGYCKINFLREAYELLCDMKNRGRKPDIVIYTVLLDGLFKTRLQELCSSVHLR 793

Query: 841 GAKQETAFTSTIFDEMEDMKITPDVICYTVLIDGYCKMNNLNDAIVLLEKMVDQGIMPDT 900
           G KQE A  STIFDEM+DMKITPD+ICYTVLIDGYCKMNNL+DA+VL E+MVDQGI PDT
Sbjct: 880 GEKQEIALASTIFDEMKDMKITPDIICYTVLIDGYCKMNNLSDAVVLFEEMVDQGIEPDT 793

Query: 901 VTYTTLVSGFCRSGDVEKAVTLFDDMLSKGVLPDAFFISVV 922
           VTYT L+SG CRSGD EKAVTL  DMLSKG+LP   F +++
Sbjct: 940 VTYTALLSGCCRSGDTEKAVTLMSDMLSKGILPSEQFSTLL 793

[Close]

BLAST of Cp4.1LG04g08950.1 vs. ExPASy TrEMBL
Match: A0A6J1E1Q9 (pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111430036 PE=4 SV=1)

HSP 1 Score: 1134 bits (2933), Expect = 0.0
Identity = 613/941 (65.14%), Postives = 667/941 (70.88%), Query Frame = 0


Query: 1   SDDEQITTSFNTTSHVQFNPSKVIQILESLRREPNSAFSFFHKLEERGFRHNISTYAALI 60
           SD EQ TT F+TT  VQFNPSKV+QIL SLRREPN AFSFF +LE+RGF+HNISTYAALI
Sbjct: 35  SDGEQSTTFFHTTLPVQFNPSKVVQILGSLRREPNIAFSFFRELEDRGFQHNISTYAALI 94

Query: 61  RILCSWGLERKLDSLFLNLIGSEKTEFDILDLLESLNQGYVMDGSFIRAYDALIKAYVSV 120
           RILCSWGLERKL+SLFLNLI S+K EFD+LDLLESLNQGY ++GSF RAYDALIKAYVSV
Sbjct: 95  RILCSWGLERKLESLFLNLIDSKKMEFDVLDLLESLNQGYAVNGSFTRAYDALIKAYVSV 154

Query: 121 SLFDSAVDLLFRSERKGFVPHIFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPNDYTY 180
           SLFDSAVDLLFRS RKGFVPHIFTCN+LLNRLI+HGK+N+AL VYKQLKRFGFHPNDYTY
Sbjct: 155 SLFDSAVDLLFRSGRKGFVPHIFTCNYLLNRLIKHGKMNIALVVYKQLKRFGFHPNDYTY 214

Query: 181 AIVIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRA 240
           AIVIKALCKMGNMEEAI IFEEMSEAGVV +AFA TAYIEGLCTH CSA  YQLLQ WRA
Sbjct: 215 AIVIKALCKMGNMEEAIYIFEEMSEAGVVASAFAYTAYIEGLCTHHCSASAYQLLQAWRA 274

Query: 241 AQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVPDAQTYGVLINGYCKMLKLQK 300
           AQAPIDVYAY VVI GFCEEM++++AENVFL+MEKYGVVP+AQTYGVLINGYCK LKLQK
Sbjct: 275 AQAPIDVYAYSVVIHGFCEEMKIDEAENVFLEMEKYGVVPNAQTYGVLINGYCKKLKLQK 334

Query: 301 ALSLHSFMLSKEVVNQFKVFQDEGVFFDKVAYNIVVHALCEQGKLEEAMELLEDMTSRQI 360
           ALSLHS MLSK                                                 
Sbjct: 335 ALSLHSLMLSK------------------------------------------------- 394

Query: 361 QMDVVHYTTMIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQ 420
                                                                       
Sbjct: 395 ------------------------------------------------------------ 454

Query: 421 LLQDWRAAQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVPDAQTYGVLINGYC 480
                                                                       
Sbjct: 455 ------------------------------------------------------------ 514

Query: 481 KMLKLQKALSLHSFMLSKGIKTNCVIVSSILQCLIRMQMYSEVVNQFKVFQDEGVFFDKV 540
                             GIKTNCVIVSSILQCL+RMQM SEVVNQFKVFQ +GV+FDKV
Sbjct: 515 ------------------GIKTNCVIVSSILQCLLRMQMCSEVVNQFKVFQGKGVYFDKV 574

Query: 541 AYNIVVHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKGFFVQGKIYEAMTMFENL 600
           AYNIV+HALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKGF VQGKI+EAM MFENL
Sbjct: 575 AYNIVLHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKGFLVQGKIHEAMVMFENL 634

Query: 601 KKNGIEPDTITYNVLAAGLSRNGLVSEVKDLLDYMDEHSLREDPKISNLIIENLCIGGKV 660
           KKNGIEPDTITY+VLAAGLSRNGLVS+V+ LLDYM+EH LREDPKI NL+IENLC+GGKV
Sbjct: 635 KKNGIEPDTITYDVLAAGLSRNGLVSKVQGLLDYMEEHGLREDPKILNLVIENLCVGGKV 694

Query: 661 KEATEIFNT-------------------NRSKDAYELFVNLSKKGVLLKKSSLFRLVSSL 720
           KEATE FN+                   N + DAY+LFVNLSKKGV +KKS+L RLVSSL
Sbjct: 695 KEATEFFNSLEVKTVDNYSAMINGYCAANHTNDAYDLFVNLSKKGVSIKKSTLSRLVSSL 754

Query: 721 CMDDSNDRAIKVIKRLSIINVEANEIVYNKVIASLCRAGNMKMAQCLFDCLICAGLTPDL 780
           CM+DS+ RAIKVIK+L I++VEANEIVYN VI+SLCR GNMK AQ LFDCL+CAGLTPDL
Sbjct: 755 CMEDSSGRAIKVIKKLPIMDVEANEIVYNNVISSLCRVGNMKRAQSLFDCLVCAGLTPDL 788

Query: 781 KTYTTMINGYCKINFLREAYELLCDMKIRGRKPDIFIYTVLLDGQFKTRLRGLCSSVDLR 840
            TYT MI GYCKINFLREAY LLCDMK RGRKPDI IYTVLLDG FKTRL+  CSSVDLR
Sbjct: 815 ITYTMMIKGYCKINFLREAYLLLCDMKNRGRKPDIVIYTVLLDGLFKTRLQEFCSSVDLR 788

Query: 841 GAKQETAFTSTIFDEMEDMKITPDVICYTVLIDGYCKMNNLNDAIVLLEKMVDQGIMPDT 900
           G KQE AF STIFDEM+DMKITPD+ICYTVLIDGYCKMNNLNDA+VL E+MVDQGI PD 
Sbjct: 875 GEKQEIAFASTIFDEMKDMKITPDIICYTVLIDGYCKMNNLNDAVVLFEEMVDQGIEPDI 788

Query: 901 VTYTTLVSGFCRSGDVEKAVTLFDDMLSKGVLPDAFFISVV 922
           VTYT L+SG CRSGD +KA TL  DMLSKG+LP   F S++
Sbjct: 935 VTYTALLSGCCRSGDTKKAATLMSDMLSKGILPSEQFSSLL 788

[Close]

BLAST of Cp4.1LG04g08950.1 vs. TAIR 10
Match: AT2G26790.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 466.1 bits (1198), Expect = 7.4e-131
Identity = 308/936 (32.91%), Postives = 452/936 (48.29%), Query Frame = 0


Query: 25  QILESLRREPNSAFSFFHKLEERGFRHNISTYAALIRILCSWGLERKLDSLFLNLIGSEK 84
           ++L S R +PN A SF  +L+E G   N++ YA L+RIL +WGL+ KLDS+ + LI +E+
Sbjct: 61  RLLNSTRDDPNLALSFLRQLKEHGVSPNVNAYATLVRILTTWGLDIKLDSVLVELIKNEE 120

Query: 85  TEFDILDLLESL-NQGYVMDGSF--IRAYDALIKAYVSVSLFDSAVDLLFRSERKGFVPH 144
             F ++DL+E +  Q      SF  IR   AL+KAYVS+ +FD A D+LF+S+R   V  
Sbjct: 121 RGFTVMDLIEVIGEQAEEKKRSFVLIRVSGALVKAYVSLGMFDEATDVLFQSKRLDCVVD 180

Query: 145 IFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPNDYTYAIVIKALCKMGNMEEAIDIFE 204
           I  CNFL+NR+ E GK+ M +T++KQLK+ G   N+YTYAIV+KALC+ GN+EEA  +  
Sbjct: 181 IKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAML-- 240

Query: 205 EMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRAAQAPIDVYAYFVVIRGFCEEM 264
                                                                       
Sbjct: 241 ------------------------------------------------------------ 300

Query: 265 EVNKAENVFLDMEKYGVVPDAQTYGVLINGYCKMLKLQKALSLHSFMLSKEVVNQFKVFQ 324
                                                                    + +
Sbjct: 301 ---------------------------------------------------------LIE 360

Query: 325 DEGVFFDKVAYNIVVHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKALCKMGNME 384
           +E VF     Y   ++ LC  G+ E+A+ L+ ++  R+                      
Sbjct: 361 NESVF----GYKTFINGLCVTGETEKAVALILELIDRK---------------------- 420

Query: 385 EAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRAAQAPIDVYAYFVVI 444
                                  Y+ G               D RA           +V+
Sbjct: 421 -----------------------YLAG--------------DDLRAVLG--------MVV 480

Query: 445 RGFCEEMEVNKAENVFLDMEKYGVVPDAQTYGVLINGYCKMLKLQKALSLHSFMLSKGIK 504
           RGFC EM++  AE+V ++ME+ G   D      +I+ YCK + L +AL     ML KG+K
Sbjct: 481 RGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLK 540

Query: 505 TNCVIVSSILQCLIRMQMYSEVVNQFKVFQDEGVFFDKVAYNIVVHALCEQGKLEEAMEL 564
            NCVIVS ILQC  +M M  E + +FK F+D  +F D+V YN+   AL + G++EEA EL
Sbjct: 541 VNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFEL 600

Query: 565 LEDMTSRQIQMDVVHYTTMIKGFFVQGKIYEAMTMFENLKKNGIEPDTITYNVLAAGLSR 624
           L++M  R I  DV++YTT+I G+ +QGK+ +A+ + + +  NG+ PD ITYNVL +GL+R
Sbjct: 601 LQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLAR 660

Query: 625 NGLVSEVKDLLDYMDEHSLREDPKISNLIIENLCIGGKVKEATEIFNT------------ 684
           NG   EV ++ + M     + +   +++IIE LC   KVKEA + F++            
Sbjct: 661 NGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASF 720

Query: 685 -------NRSKDAYELFVNLSKKGVLLKKSSLFRLVSSLCMDDSNDRAIKVIKRLSIINV 744
                    SK AY+ FV L      L+KS   +L  SLC++   ++A  V+K++S   V
Sbjct: 721 VKGYCEAGLSKKAYKAFVRLEYP---LRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRV 780

Query: 745 EANEIVYNKVIASLCRAGNMKMAQCLFDCLICAGLTPDLKTYTTMINGYCKINFLREAYE 804
           E    +  K+I + C+  N++ AQ LFD ++  GL PDL TYT MI+ YC++N L++A  
Sbjct: 781 EPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAES 799

Query: 805 LLCDMKIRGRKPDIFIYTVLLDGQFK--TRLRGLCSSVDLRGAKQETAFTSTIFDEMEDM 864
           L  DMK RG KPD+  YTVLLD   K        CS     G ++     S +  E    
Sbjct: 841 LFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRK----ASEVLREFSAA 799

Query: 865 KITPDVICYTVLIDGYCKMNNLNDAIVLLEKMVDQGIMPDTVTYTTLVSGFCRSGDVEKA 924
            I  DV+CYTVLID  CKMNNL  A  L ++M+D G+ PD V YTTL+S + R G ++ A
Sbjct: 901 GIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMA 799

Query: 925 VTLFDDMLSKGVLPDAFFISVV------SRKFKQGD 931
           VTL  ++  K  +P   F + V      +++F+ G+
Sbjct: 961 VTLVTELSKKYNIPSESFEAAVKSAALKAKRFQYGE 799

[Close]

BLAST of Cp4.1LG04g08950.1 vs. TAIR 10
Match: AT1G13800.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 356.3 bits (913), Expect = 8.3e-98
Identity = 258/952 (27.10%), Postives = 424/952 (44.54%), Query Frame = 0


Query: 1   SDDEQITTSFNTTSHVQFNPSKVIQILESLRREPNSAFSFFHKLEERGFRHNISTYAALI 60
           S  EQ+         ++ N   V+++L S++ +P  A SF  ++E      ++  YA +I
Sbjct: 38  SHSEQVKEGTFDYKALELNDIGVLRVLNSMKDDPYLALSFLKRIEGNVTLPSVQAYATVI 97

Query: 61  RILCSWGLERKLDSLFLNLI--GSEKTEFDILDLLESLNQGYVMDGSFIRAYDALIKAYV 120
           RI+C WGL++KLD+    L+  G E   F ++DLL+++ +        IR   AL+KAY 
Sbjct: 98  RIVCGWGLDKKLDTFLFELVRRGDEGRGFSVMDLLKAIGEMEQSLVLLIRVSTALVKAYA 157

Query: 121 SVSLFDSAVDLLFRSERK-GFVPHIFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPND 180
           ++ +FD A+D+ FR+    G  P I   NFL++R+I  G+ +M +  + +++R G   + 
Sbjct: 158 NLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADA 217

Query: 181 YTYAIVIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQD 240
           +TY +V++AL +  + EE   +   +  +           +IEGLC ++ +   Y LLQ 
Sbjct: 218 HTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQP 277

Query: 241 WRAAQAPIDV----YAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVPDAQTYGVLINGYC 300
            R A   +D      AY  V+RG C EM +  AE+V LDMEK+G+ PD   Y  +I G+ 
Sbjct: 278 LRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHR 337

Query: 301 KMLKLQKALSLHSFMLSK-----------------------EVVNQFKVFQDEGVFFDKV 360
           K + + KA+ + + ML K                       E  + FK F++  +  D+V
Sbjct: 338 KNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRV 397

Query: 361 AYNIVVHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKALCKMGNMEEAIDIFEEM 420
            YN+   AL + GK+EEA+EL  +MT + I  DV++YTT+I   C  G   +A D+  EM
Sbjct: 398 CYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEM 457

Query: 421 SEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRAAQAPIDVYAYFVVIRGFCEEMEV 480
              G  P+         GL T+  +   ++ L+             + +VI G  +  E+
Sbjct: 458 DGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGEL 517

Query: 481 NKAENVFLDMEKYGVVPDAQTYGVLINGYCKMLKLQKALSLHSFMLSKGIKTNCVIVSSI 540
           +KAE  +  +E      DA     ++ G+C    L  A     F+  +      V  +  
Sbjct: 518 DKAEAFYESLEHKSRENDAS----MVKGFCAAGCLDHA--FERFIRLEFPLPKSVYFTLF 577

Query: 541 LQCLIRMQMYSEVVNQFKVFQDEGVFFDKVAYNIVVHALCEQGKLEEAMELLEDMTSRQI 600
                     S+  +        GV  +K  Y  ++ A C    + +A E  E + +++I
Sbjct: 578 TSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKI 637

Query: 601 QMDVVHYTTMIKGFFVQGKIYEAMTMFENLKKNGIEPDTITYNVLAAGLSRNGLVSEVKD 660
             D+  YT MI  +    +  +A  +FE++K+  ++PD +TY+VL               
Sbjct: 638 VPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVL--------------- 697

Query: 661 LLDYMDEHSLREDPKISNLIIENLCIGGKVKEATEIFNTNRSKDAYELFVNLSKKGVLLK 720
                    L  DP++                     +  R  +A+++  ++        
Sbjct: 698 ---------LNSDPEL---------------------DMKREMEAFDVIPDV-------- 757

Query: 721 KSSLFRLVSSLCMDDSNDRAIKVIKRLSIINVEANEIVYNKVIASLCRAGNMKMAQCLFD 780
                                               + Y  +I   C   ++K    LF 
Sbjct: 758 ------------------------------------VYYTIMINRYCHLNDLKKVYALFK 817

Query: 781 CLICAGLTPDLKTYTTMINGYCKINFLREAYELLCDMKIRGRKPDIFIYTVLLDGQFKTR 840
            +    + PD+ TYT ++    + N  RE       MK    KPD+F YTVL+D Q    
Sbjct: 818 DMKRREIVPDVVTYTVLLKNKPERNLSRE-------MKAFDVKPDVFYYTVLIDWQ---- 872

Query: 841 LRGLCSSVDLRGAKQETAFTSTIFDEMEDMKITPDVICYTVLIDGYCKMNNLNDAIVLLE 900
               C   DL  AK+       IFD+M +  + PD   YT LI   CKM  L +A ++ +
Sbjct: 878 ----CKIGDLGEAKR-------IFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFD 872

Query: 901 KMVDQGIMPDTVTYTTLVSGFCRSGDVEKAVTLFDDMLSKGVLPDAFFISVV 923
           +M++ G+ PD V YT L++G CR+G V KAV L  +ML KG+ P    +S V
Sbjct: 938 RMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAV 872

[Close]

BLAST of Cp4.1LG04g08950.1 vs. TAIR 10
Match: AT5G59900.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 285.0 bits (728), Expect = 2.3e-76
Identity = 222/895 (24.80%), Postives = 384/895 (42.91%), Query Frame = 0


Query: 23  VIQILESLRREPNSAFSFFHKLE-ERGFRHNISTYAALIRILCSWGLERKLDSLFLNLIG 82
           V +IL     +P     FF+ L   RGF H+ +++  LI  L    L     SL   L+ 
Sbjct: 73  VEEILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLL 132

Query: 83  SEKTEFDILDLLESLNQGYVMDGSFIRAYDALIKAYV-SVSLFDSAVDLLFRSERKGFVP 142
                 D+ ++L S  +   +  S   ++D LI+ YV S  + D  +       +   +P
Sbjct: 133 RALKPSDVFNVLFSCYEKCKLSSS--SSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLP 192

Query: 143 HIFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPNDYTYAIVIKALCKMGNMEEAIDIF 202
            + T + LL+ L++     +A+ ++  +   G  P+ Y Y  VI++LC++ ++  A ++ 
Sbjct: 193 EVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMI 252

Query: 203 EEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRAAQAPIDVYAYFVVIRGFCEE 262
             M   G                                     +++  Y V+I G C++
Sbjct: 253 AHMEATG-----------------------------------CDVNIVPYNVLIDGLCKK 312

Query: 263 MEVNKAENVFLDMEKYGVVPDAQTYGVLINGYCKMLKLQKALSLHSFMLSKEVVNQFKVF 322
            +V +A  +  D+    + PD  TY  L+ G CK+ + +  L +   ML           
Sbjct: 313 QKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSP----- 372

Query: 323 QDEGVFFDKVAYNIVVHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKALCKMGNM 382
                   + A + +V  L ++GK+EEA+ L++ +    +  ++  Y  +I +LCK    
Sbjct: 373 -------SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKF 432

Query: 383 EEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRAAQAPIDVYAYFVV 442
            EA  +F+ M + G+ PN    +  I+  C           L +       + VY Y  +
Sbjct: 433 HEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSL 492

Query: 443 IRGFCEEMEVNKAENVFLDMEKYGVVPDAQTYGVLINGYCKMLKLQKALSLHSFMLSKGI 502
           I G C+  +++ AE    +M    + P   TY  L+ GYC   K+ KAL L+  M  KGI
Sbjct: 493 INGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 552

Query: 503 KTNCVIVSSILQCLIRMQMYSEVVNQFKVFQDEGVFFDKVAYNIVVHALCEQGKLEEAME 562
             +    +++L  L R  +  + V  F    +  V  ++V YN+++   CE+G + +A E
Sbjct: 553 APSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFE 612

Query: 563 LLEDMTSRQIQMDVVHYTTMIKGFFVQGKIYEAMTMFENLKKNGIEPDTITYNVLAAGLS 622
            L++MT + I  D   Y  +I G  + G+  EA    + L K   E + I Y  L  G  
Sbjct: 613 FLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFC 672

Query: 623 RNGLVSEVKDLLDYMDEHSLREDPKISNLIIENLCIGGKVKEATEIFNTNRSKDAYELFV 682
           R G + E   +   M +  +  D     L+   + I G +K           KD  +LF 
Sbjct: 673 REGKLEEALSVCQEMVQRGVDLD-----LVCYGVLIDGSLKH----------KDR-KLFF 732

Query: 683 NLSKKGVLLKKSSLFRLVSSLCMDDSNDRAIKVIKRLSIINVEANEIVYNKVIASLCRAG 742
            L K                    + +DR +K            ++++Y  +I +  + G
Sbjct: 733 GLLK--------------------EMHDRGLK-----------PDDVIYTSMIDAKSKTG 792

Query: 743 NMKMAQCLFDCLICAGLTPDLKTYTTMINGYCKINFLREAYELLCDMKIRGRKPDIFIYT 802
           + K A  ++D +I  G  P+  TYT +ING CK  F+ EA  L   M+     P+   Y 
Sbjct: 793 DFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYG 852

Query: 803 VLLDGQFKTRLRGLCSSVDLRGAKQETAFTSTIFDEMEDMKITPDVICYTVLIDGYCKMN 862
             LD   K  +  +  +V+L  A  +    +T                Y +LI G+C+  
Sbjct: 853 CFLDILTKGEV-DMQKAVELHNAILKGLLANT--------------ATYNMLIRGFCRQG 856

Query: 863 NLNDAIVLLEKMVDQGIMPDTVTYTTLVSGFCRSGDVEKAVTLFDDMLSKGVLPD 916
            + +A  L+ +M+  G+ PD +TYTT+++  CR  DV+KA+ L++ M  KG+ PD
Sbjct: 913 RIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPD 856

[Close]

BLAST of Cp4.1LG04g08950.1 vs. TAIR 10
Match: AT5G14770.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 266.5 bits (680), Expect = 8.6e-71
Identity = 204/811 (25.15%), Postives = 373/811 (45.99%), Query Frame = 0


Query: 108 RAYDALIKAYVSVSLFDSAVDLLF-RSERKGFVPHIFTCNFLLNRLIEHGKLNMALTVYK 167
           R +++LI  +    L    V L++ +    G  P +F  N L++   + G+L+ A+++  
Sbjct: 94  RLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISL-- 153

Query: 168 QLKRFGFHPNDYTYAIVIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYIEGLCTHR 227
            L+      +  TY  VI  LC+ G  +EA     EM + G++P+  +    I+G C   
Sbjct: 154 -LRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVG 213

Query: 228 CSAYGYQLLQDWRAAQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVPDAQTYG 287
                  L+ +     + +++  + +++  +     ++  E  + DM   G  PD  T+ 
Sbjct: 214 NFVRAKALVDE----ISELNLITHTILLSSY---YNLHAIEEAYRDMVMSGFDPDVVTFS 273

Query: 288 VLINGYCKMLKLQKALSLHSFMLSKEVVNQFKVFQDEGVFFDKVAYNIVVHALCEQGKLE 347
            +IN  CK  K+     L   +L +E+       ++  V+ + V Y  +V +L +     
Sbjct: 274 SIINRLCKGGKV-----LEGGLLLREM-------EEMSVYPNHVTYTTLVDSLFKANIYR 333

Query: 348 EAMELLEDMTSRQIQMDVVHYTTMIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTAYI 407
            A+ L   M  R I +D+V YT ++  L K G++ EA   F+ + E   VPN    TA +
Sbjct: 334 HALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALV 393

Query: 408 EGLC-THRCSAYGYQLLQDWRAAQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGV 467
           +GLC     S+  + + Q    +  P +V  Y  +I G+ ++  + +A ++   ME   V
Sbjct: 394 DGLCKAGDLSSAEFIITQMLEKSVIP-NVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNV 453

Query: 468 VPDAQTYGVLINGYCKMLKLQKALSLHSFMLSKGIKTNCVIVSSILQCLIRMQMYSEVVN 527
           VP+  TYG +I+G  K  K + A+ L   M   G++ N  I+ +++  L R+    EV  
Sbjct: 454 VPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKG 513

Query: 528 QFKVFQDEGVFFDKVAYNIVVHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKGFF 587
             K    +GV  D++ Y  ++    + G  E A+   E+M  R +  DVV Y  +I G  
Sbjct: 514 LVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGML 573

Query: 588 VQGKIYEAMTMFENLKKNGIEPDTITYNVLAAGLSRNGLVSEVKDLLDYMDEHSLREDPK 647
             GK+  A   ++ +++ GIEPD  T+N++     + G    +  L D M    ++    
Sbjct: 574 KFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLM 633

Query: 648 ISNLIIENLCIGGKVKEATEIFN------TNRSKDAYELFVNLSKK-------------- 707
             N+++  LC  GK++EA  I N       + +   Y +F++ S K              
Sbjct: 634 SCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETL 693

Query: 708 ---GVLLKKSSLFRLVSSLCMDDSNDRAIKVIKRLSIINVEANEIVYNKVIASLCRAGNM 767
              G+ L +     L+++LC      +A  V+  +       + + +N ++       ++
Sbjct: 694 LSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHV 753

Query: 768 KMAQCLFDCLICAGLTPDLKTYTTMINGYCKINFLREAYELLCDMKIRGRKPDIFIYTVL 827
           + A   +  ++ AG++P++ TY T+I G      ++E  + L +MK RG +PD F Y  L
Sbjct: 754 RKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNAL 813

Query: 828 LDGQFKTRLRGLCSSVDLRGAKQETAFTSTIFDEMEDMKITPDVICYTVLIDGYCKMNNL 887
           + GQ K          +++G       + TI+ EM    + P    Y VLI  +  +  +
Sbjct: 814 ISGQAKIG--------NMKG-------SMTIYCEMIADGLVPKTSTYNVLISEFANVGKM 865

Query: 888 NDAIVLLEKMVDQGIMPDTVTYTTLVSGFCR 894
             A  LL++M  +G+ P+T TY T++SG C+
Sbjct: 874 LQARELLKEMGKRGVSPNTSTYCTMISGLCK 865

[Close]

BLAST of Cp4.1LG04g08950.1 vs. TAIR 10
Match: AT5G61990.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 265.8 bits (678), Expect = 1.5e-70
Identity = 218/963 (22.64%), Postives = 416/963 (43.20%), Query Frame = 0


Query: 8   TSFNTTSHVQFNPSKVIQILESLR-REPNSAFSFFHKLE-ERGFRHNISTYAALIRILCS 67
           T  ++   ++ NP  V+ +L S R  +P+   SFF+ ++ ++     + +++ L   LC+
Sbjct: 50  TLVSSNLSIEINPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCN 109

Query: 68  WGLERKLDSLFLNLIGSEKTEFDILDLLESLNQGYVMDGSFIRAYDALIKAYVSVSLFDS 127
           +G   K  S+   +I       ++   +   +Q +V        +  L   Y++    + 
Sbjct: 110 FGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEE 169

Query: 128 AVDLLFRSERKGFVPHIFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPNDYTYAIVIK 187
           AV +   S     VP +  C  LL+ L+   +L++   VYK +       +  TY ++I 
Sbjct: 170 AVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLII 229

Query: 188 ALCKMGNMEEAIDIF---------------------EEMSEAGVVPNAFACTAYIEGLCT 247
           A C+ GN++   D+                      E M   G+VP  +     I+GLC 
Sbjct: 230 AHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCK 289

Query: 248 HRCSAYGYQLLQDWRAAQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYGVVPDAQT 307
            +       LL +  +    +D + Y ++I G  +    + A+ +  +M  +G+      
Sbjct: 290 IKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYM 349

Query: 308 YGVLINGYCKMLKLQKALSLHSFMLSKEVVNQFKVFQDEGVFFDKVAYNIVVHALCEQGK 367
           Y   I    K   ++KA +L   M++  ++ Q +            AY  ++   C +  
Sbjct: 350 YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQ------------AYASLIEGYCREKN 409

Query: 368 LEEAMELLEDMTSRQIQMDVVHYTTMIKALCKMGNMEEAIDIFEEMSEAGVVPNAFACTA 427
           + +  ELL +M  R I +    Y T++K +C  G+++ A +I +EM  +G  PN    T 
Sbjct: 410 VRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTT 469

Query: 428 YIEGLCTHRCSAYGYQLLQDWRAAQAPIDVYAYFVVIRGFCEEMEVNKAENVFLDMEKYG 487
            I+    +       ++L++ +      D++ Y  +I G  +   +++A +  ++M + G
Sbjct: 470 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 529

Query: 488 VVPDAQTYGVLINGYCKMLKLQKALSLHSFMLSKGIKTNCVIVSSILQCLIRMQMYSEVV 547
           + P+A TYG  I+GY +  +   A      M   G+  N V+ + ++    +     E  
Sbjct: 530 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEAC 589

Query: 548 NQFKVFQDEGVFFDKVAYNIVVHALCEQGKLEEAMELLEDMTSRQIQMDVVHYTTMIKGF 607
           + ++   D+G+  D   Y ++++ L +  K+++A E+  +M  + I  DV  Y  +I GF
Sbjct: 590 SAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGF 649

Query: 608 FVQGKIYEAMTMFENLKKNGIEPDTITYNVLAAGLSRNGLVSEVKDLLDYMDEHSLREDP 667
              G + +A ++F+ + + G+ P+ I YN+L  G  R+G + + K+LLD M    L  + 
Sbjct: 650 SKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNA 709

Query: 668 KISNLIIENLCIGGKVKEATEIFNTNRSKD------AYELFVN----------------L 727
                II+  C  G + EA  +F+  + K        Y   V+                 
Sbjct: 710 VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT 769

Query: 728 SKKGVLLKKSSLFRLVSSLCMDDSNDRAIKVIKRLSIINVE----ANEIVYNKVIASLCR 787
           +KKG     +    L++ +      +   +V+ RL   + +     N++ YN +I  LC+
Sbjct: 770 NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCK 829

Query: 788 AGNMKMAQCLFDCLICAGLTPDLKTYTTMINGYCKINFLREAYELLCDMKIRGRKPDIFI 847
            GN++ A+ LF  +  A L P + TYT+++NGY K+                GR+ ++F 
Sbjct: 830 EGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKM----------------GRRAEMF- 889

Query: 848 YTVLLDGQFKTRLRGLCSSVDLRGAKQETAFTSTIFDEMEDMKITPDVICYTVLIDGYCK 907
                                             +FDE     I PD I Y+V+I+ + K
Sbjct: 890 ---------------------------------PVFDEAIAAGIEPDHIMYSVIINAFLK 949

Query: 908 MNNLNDAIVLLEKM-----VDQGIMPDTVTYTTLVSGFCRSGDVEKAVTLFDDMLSKGVL 917
                 A+VL+++M     VD G      T   L+SGF + G++E A  + ++M+    +
Sbjct: 950 EGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYI 950

The following BLAST results are available for this feature:

BLAST of Cp4.1LG04g08950.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81028	1.0e-129	32.91	Pentatricopeptide repeat-containing protein At2g26790, mitochondrial OS=Arabidop...	[more]
Q9LMH5	1.2e-96	27.10	Putative pentatricopeptide repeat-containing protein At1g13800 OS=Arabidopsis th...	[more]
Q9FJE6	3.3e-75	24.80	Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis th...	[more]
Q9LER0	1.2e-69	25.15	Pentatricopeptide repeat-containing protein At5g14770, mitochondrial OS=Arabidop...	[more]
Q9FIT7	2.1e-69	22.64	Pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Arabidop...	[more]

BLAST of Cp4.1LG04g08950.1 vs. NCBI nr


Match Name	Identity	Description
XP_023530445.1	77.91	pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like [Cucur...	[more]
KAG7021744.1	76.43	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
KAG6587854.1	76.56	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
XP_022932080.1	76.22	pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like isofor...	[more]
XP_022932065.1	76.22	pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like isofor...	[more]

BLAST of Cp4.1LG04g08950.1 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1F176	76.22	pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like isofor...	[more]
A0A6J1EVM2	76.22	pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like isofor...	[more]
A0A6J1F161	76.22	pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like isofor...	[more]
A0A6J1JGR8	66.10	pentatricopeptide repeat-containing protein At2g26790, mitochondrial OS=Cucurbit...	[more]
A0A6J1E1Q9	65.14	pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like OS=Cuc...	[more]

BLAST of Cp4.1LG04g08950.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G26790.1	7.4e-131	32.91	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G13800.1	8.3e-98	27.10	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G59900.1	2.3e-76	24.80	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G14770.1	8.6e-71	25.15	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G61990.1	1.5e-70	22.64	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 109..138 e-value: 0.56 score: 10.6
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 561..615 e-value: 5.1E-13 score: 48.9
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 763..796 e-value: 6.8E-8 score: 30.2 coord: 471..503 e-value: 1.2E-4 score: 20.0 coord: 252..282 e-value: 1.4E-5 score: 23.0 coord: 366..399 e-value: 5.3E-12 score: 43.1 coord: 178..212 e-value: 9.0E-12 score: 42.4 coord: 439..469 e-value: 1.4E-5 score: 23.0 coord: 330..363 e-value: 1.8E-7 score: 28.9 coord: 882..916 e-value: 7.5E-12 score: 42.7 coord: 576..609 e-value: 1.4E-6 score: 26.1 coord: 610..639 e-value: 0.0028 score: 15.7 coord: 540..573 e-value: 1.8E-7 score: 28.9 coord: 847..881 e-value: 2.5E-8 score: 31.6 coord: 143..176 e-value: 1.5E-4 score: 19.7
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 329..376 e-value: 5.2E-14 score: 52.2 coord: 844..893 e-value: 3.2E-16 score: 59.2 coord: 725..773 e-value: 1.6E-11 score: 44.2 coord: 246..294 e-value: 3.2E-12 score: 46.4 coord: 140..189 e-value: 5.8E-13 score: 48.8 coord: 433..481 e-value: 3.3E-12 score: 46.4
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 246..280 score: 10.818861
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 573..607 score: 11.553267
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 176..210 score: 13.888024
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 281..315 score: 9.744654
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 363..397 score: 14.490896
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 538..572 score: 12.079411
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 608..642 score: 9.821383
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 433..467 score: 10.818861
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 845..879 score: 12.463056
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 141..175 score: 9.766576
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 468..502 score: 10.939435
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 760..794 score: 12.353442
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 880..914 score: 14.512818
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 725..759 score: 10.226951
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 328..362 score: 12.079411
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 316..416 e-value: 1.4E-29 score: 104.8 coord: 670..810 e-value: 5.1E-26 score: 93.1 coord: 417..525 e-value: 4.3E-20 score: 73.8
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 189..315 e-value: 1.5E-27 score: 98.9 coord: 811..935 e-value: 1.8E-30 score: 108.4 coord: 526..668 e-value: 1.1E-30 score: 109.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 1..173 e-value: 1.6E-24 score: 88.5
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 175..908
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1009..1028
None	No IPR available	PANTHER	PTHR45613	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 5..372 coord: 370..925
None	No IPR available	PANTHER	PTHR45613:SF4	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 5..372 coord: 370..925

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG04g08950	Cp4.1LG04g08950	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG04g08950.1:exon:006	Cp4.1LG04g08950.1:exon:006	exon
Cp4.1LG04g08950.1:exon:005	Cp4.1LG04g08950.1:exon:005	exon
Cp4.1LG04g08950.1:exon:004	Cp4.1LG04g08950.1:exon:004	exon
Cp4.1LG04g08950.1:exon:003	Cp4.1LG04g08950.1:exon:003	exon
Cp4.1LG04g08950.1:exon:002	Cp4.1LG04g08950.1:exon:002	exon
Cp4.1LG04g08950.1:exon:001	Cp4.1LG04g08950.1:exon:001	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG04g08950.1:three_prime_utr:002	Cp4.1LG04g08950.1:three_prime_utr:002	three_prime_UTR
Cp4.1LG04g08950.1:three_prime_utr:001	Cp4.1LG04g08950.1:three_prime_utr:001	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG04g08950.1:cds:005	Cp4.1LG04g08950.1:cds:005	CDS
Cp4.1LG04g08950.1:cds:004	Cp4.1LG04g08950.1:cds:004	CDS
Cp4.1LG04g08950.1:cds:003	Cp4.1LG04g08950.1:cds:003	CDS
Cp4.1LG04g08950.1:cds:002	Cp4.1LG04g08950.1:cds:002	CDS
Cp4.1LG04g08950.1:cds:001	Cp4.1LG04g08950.1:cds:001	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG04g08950.1	Cp4.1LG04g08950.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding