Cp4.1LG03g03010.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTGACCAACCATGCTTGCTAATTGAGAATCTTTCATCTCCTCAAAGGCGTGGCCCTCCAAATTCACAGGTCTAACTCATCCCTGTCTAACTGTTGGCTTCTAAAAATTTATGGCCCAAACATATCACGCAGAGAGATTCGTGCTGTCTAGGCCATTCACTCCTTGAGGAGATGCCATTATTTAGGCCGTCAACGGTGGTTGTTCCATCCAGTTCCTTCCTTTATGGACAATACTGAACAAGAACAACTCAGCCAAGTAAAACTTTTATGCATATTAATTTACCTGATCAAGTGATATTTTGTTGATATCCTATTTATGTAATTTTTTAATGAACAGATCTCTGGTGTTCACGCATTTAGACAAGAAAATTTCAGAGATTCGAAGGCAGAAACTCTATTATCATCTGCTAAAGCATCATCTTACAGAGACGGGCACGCAAAAGAATGTCTAAAATATCGACTAAATTTTACATGCACATTCCATTCCCATGAGTACAGAACTTTTAGTACGTACTTCCAGAGACTGAATTTGATCTGGACAAAGACGAAGAGTGGTTTAAGAACTCGATGCAATCTTCAATGGCTTCAGCTCGATGCGAGTCCATGGAGTCCGAGACCGATCTTGACCTTGTAAAGGTGGAGGTGGAGGCTGAAGAAACCTTTCGAGAAGATTTTCTTGTTGATACAAAGCGAATGGCTTCACTTACTTTGGCCTTGAGGCTCTGTAGAAACCTAACCGGCAAGTACCTTGTGTCTCTGCTCAGGCCGAAGCTCCATATTCCGGCTCCGCCGTCACGGCCGCCGTGTTTGAGCAGGACTGTTGGCTTATCATTCACATCGGGACTGAAGCTGACCCGTTTGCTCGCTTTCCTTGACATCTGA TTGACCAACCATGCTTGCTAATTGAGAATCTTTCATCTCCTCAAAGGCGTGGCCCTCCAAATTCACAGGTCTAACTCATCCCTGTCTAACTGTTGGCTTCTAAAAATTTATGGCCCAAACATATCACGCAGAGAGATTCGTGCTGTCTAGGCCATTCACTCCTTGAGGAGATGCCATTATTTAGGCCGTCAACGGTGGTTGTTCCATCCAGTTCCTTCCTTTATGGACAATACTGAACAAGAACAACTCAGCCAAATCTCTGGTGTTCACGCATTTAGACAAGAAAATTTCAGAGATTCGAAGGCAGAAACTCTATTATCATCTGCTAAAGCATCATCTTACAGAGACGGGCACGCAAAAGAATGTCTAAAATATCGACTAAATTTTACATGCACATTCCATTCCCATGAGTACAGAACTTTTACTCGATGCGAGTCCATGGAGTCCGAGACCGATCTTGACCTTGTAAAGGTGGAGGTGGAGGCTGAAGAAACCTTTCGAGAAGATTTTCTTGTTGATACAAAGCGAATGGCTTCACTTACTTTGGCCTTGAGGCTCTGTAGAAACCTAACCGGCAAGTACCTTGTGTCTCTGCTCAGGCCGAAGCTCCATATTCCGGCTCCGCCGTCACGGCCGCCGTGTTTGAGCAGGACTGTTGGCTTATCATTCACATCGGGACTGAAGCTGACCCGTTTGCTCGCTTTCCTTGACATCTGA ATGGACAATACTGAACAAGAACAACTCAGCCAAATCTCTGGTGTTCACGCATTTAGACAAGAAAATTTCAGAGATTCGAAGGCAGAAACTCTATTATCATCTGCTAAAGCATCATCTTACAGAGACGGGCACGCAAAAGAATGTCTAAAATATCGACTAAATTTTACATGCACATTCCATTCCCATGAGTACAGAACTTTTACTCGATGCGAGTCCATGGAGTCCGAGACCGATCTTGACCTTGTAAAGGTGGAGGTGGAGGCTGAAGAAACCTTTCGAGAAGATTTTCTTGTTGATACAAAGCGAATGGCTTCACTTACTTTGGCCTTGAGGCTCTGTAGAAACCTAACCGGCAAGTACCTTGTGTCTCTGCTCAGGCCGAAGCTCCATATTCCGGCTCCGCCGTCACGGCCGCCGTGTTTGAGCAGGACTGTTGGCTTATCATTCACATCGGGACTGAAGCTGACCCGTTTGCTCGCTTTCCTTGACATCTGA MDNTEQEQLSQISGVHAFRQENFRDSKAETLLSSAKASSYRDGHAKECLKYRLNFTCTFHSHEYRTFTRCESMESETDLDLVKVEVEAEETFREDFLVDTKRMASLTLALRLCRNLTGKYLVSLLRPKLHIPAPPSRPPCLSRTVGLSFTSGLKLTRLLAFLDI Homology
BLAST of Cp4.1LG03g03010.1 vs. NCBI nr
Match: KAG7017238.1 (hypothetical protein SDJN02_19101, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 283 bits (725), Expect = 3.14e-95 Identity = 152/176 (86.36%), Postives = 152/176 (86.36%), Query Frame = 0
BLAST of Cp4.1LG03g03010.1 vs. NCBI nr
Match: KAG6596356.1 (hypothetical protein SDJN03_09536, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 145 bits (365), Expect = 3.15e-41 Identity = 82/96 (85.42%), Postives = 84/96 (87.50%), Query Frame = 0
BLAST of Cp4.1LG03g03010.1 vs. NCBI nr
Match: KAG7027905.1 (Sulfoquinovosyl transferase SQD2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 145 bits (365), Expect = 5.84e-37 Identity = 82/96 (85.42%), Postives = 84/96 (87.50%), Query Frame = 0
BLAST of Cp4.1LG03g03010.1 vs. NCBI nr
Match: TKY65880.1 (hypothetical protein E2542_SST08742 [Spatholobus suberectus]) HSP 1 Score: 57.8 bits (138), Expect = 2.25e-07 Identity = 49/110 (44.55%), Postives = 59/110 (53.64%), Query Frame = 0
BLAST of Cp4.1LG03g03010.1 vs. NCBI nr
Match: KAF9680019.1 (hypothetical protein SADUNF_Sadunf06G0076600 [Salix dunnii]) HSP 1 Score: 57.4 bits (137), Expect = 1.04e-06 Identity = 50/102 (49.02%), Postives = 57/102 (55.88%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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