Cp4.1LG02g07890.1 (mRNA) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCTCCGGCTCCGTGATACCAGAAATGCAGAAATGACTAATTAGAGAGCCGTTTGATTCGAAATGAACGGTGATTAAGGGATGAAGTTTATACCATTATTGTCCTTGTGTACACACATTCCAAAGCGTCTTTCCATAATAATACGATTTTTATGGAAATCAAAGCGGGTTTTATTAGCGAAATGAAGTTCGCCGAACCAAATATCCGATTGGTGTAAGAATTTCAAACGCGCTCTCTCGCTGTCTCGCTCTCTCGCACTCGTCTCTCCATCTTTATCACTTCCTCTGCTTTTCCAACGGTCCGCCGAGGCATTTTGGCGGTGCCGATCGCTGATTTGTCTCTCCGCCGTCGATCTCCGACTCTCACTCTACGATTCTCCTCTATCCACTGCCTCGAGCCAGCTTTTGCAGACTTTTGATTTTTCTCGTATTCGTCGATTCTTTGATTTTGTCTCAAGGTAATAATCACTAGCTACTAATCTCTTTCTCTTTCGTTCTCATTTTGTCTCTTGAACCTAAGGTTTTGTTATGTTTTCCTTTATTTCTGCCATCGAGATTTGTTTAGACTTCAGAATGTTCGCTTGAGGTGCTTGATGTTTTGTTTTATTAGGTCTCCGTAGTTATCTTATTCTTATTTCTAGGTGTTTCTGGTCCTAGACTGATAATGTTCGGGGATTTACTTTATTCTTTGGAATTTGGATACTGTTTTCTTGTGGTTGTTCGGAAGATGCTCATGACGCTTTGTTATCCCCTAAATTTCAAGTTCCGAGCATTGTAGTCCTAAAATTTATTGTGCGATGGCCTTTGATGAAGTTAAGTTGCGACTTCATTGTGCAGAAAGGTAGAAACGCTGCGTTTGGTTTGATATGGCCTGCTAATGGCAAGGGCATACAGCATTTTACGCACTGAATAGACTGAATTTTTCTTCTCATTTTAAGCTTTATTGATTGTTTTATTTGTTTCATTATTCACATTCATAGCCGGCTTCTATGAAGCGATAAGCATTTTTAGAAGATTATGCGTGAAGGATGCATCGCAGTTTGCTGGAACTTTTATGAGATTCTCAACGAGGAATGTTTTGGTGTCTTTCTATCTTTTTGTTCTTTGTGGTATAATTTGGAATTTTGTTTAATTAACTGATTTTATTGGTTTCTATAGAAGCGTAAGAACATACATCAATTGATCATAGTTCAACAAACAGATATTATTTGTCTGGAACTCTTCAATTTTTTGATTCCTTGTTAGTCCTTGTGATCTACTTTCAATTTGATTGTACAATTTTCTCTCATTATTTAACATACTTCACTACTAGCTTTACTAAAATCTATCTATGACCCTTCTAATTTAACCATAACTGATGTCTAAATTTTGTTAGGCATTCAAGATGATTGGCTCCTTTCTTACTAGAGGTCTCGTGTAAGTCTATTTGATAATAATTTGCTTGCATCGGTAATAATACAGATTATCCTGTGGTATTAATATATATTTTGTCAATCTGTTGACAGGATGATTTTTGGCTATGCTTATCCTGCATATGAGTGCTATAAAACTGTTGAAATGAACAAGCCAGAAATTGAGCAACTTCGCTTTTGGTGCCAATACTGGTATGCGATAATATTTCTTTTGCATCAGTTGTCTTTAATAAAATTCTGAGCATCAACATTGATTGGCTTTCCTTTTGGTTTCAGGATTTTAGTGGCTGTTTTGACTGTTTGTGAGAGGATTGGAGATGCATTCATTTCATGGTAGGGAATTGGATGAAGATATTGTTGATACGATGCCATTCTTTTTTATTTAGTTGTTTGGTCTAGGACTCCGTTGATTCCTCATAGTTAGTTGGCCTTTACTTGTGAATTATAAATTTTTAATAATATTATTATTATTTTCACTTGTGCAGGGTTCCTATGTATAGTGAAGCTAAATTGGCTTTCTACATATATCTCTGGTACCCCAAAACAAAAGTAAGGAATCAGAATCTGGAATTTAGGCTTTTCTCTTTCTTGCGCTCACTCCTGGGCCACCTTCTTTCTGAAATCACTTATCTTCTTCCTAATAACTTTTCATTTGTCAGGGAACAACTTATGTATATGATTCCTTCTTTAGACCATATGTAGCAAAGCATGAGACAGATATTGACCAAAATTTATTGGAACTAAGGACCAGAGCGGGTGATATTGCTGTTATCTATTGGCAGAGAGCTGCAAGCTATGGCCAGACAAGGGTATACGAGATCTTGCAATATGTTGCTGCACAATCAACAGCTAAGCCTCACAAGACTCAGGTATATTTGCAGATAAATTTAATTAGATCAAAATCGTCATACTATCGTTCATATTTTAGTTCTAAATTGGTGTTTTATTGAGTGATATGGAAAAAAAAAAATAGTACTGCAATTCTGTTGTCTGTTATAATGACCTGGTTTCTTGCTGCGTGTAATGATTTGTATCTTATTCTTCAGGCCAGGATTATGCAATGTGAAATGATTTTATGTTATGTAAAGAAGCAGCCTTACATTTCTTTACGCATCGCTCTCATTACATGCGCATCTGATATTTGTTTATCTAGTGCATGTGGACGATCGAACTTGCATTAGAAAATAGTTTTGGCGGTTCTCGAAGTACCTATATCTACTTATTTCTCTTAAATTGCAGAAACAGCCCGCAGTAGCGAAGGCGAAGGTTTCACCAGACAATGTGACATCAAAAGGCACTGGTGCCACTACTAATCAAGTGCTAATTGATCCGTCGTCATCCCCATCTTCAAGTCAACAAAAAGATGTAGCTGAAGAGGTGGGTGTTTCACAAGTTTCAAAACTGAAAACCACATTTGAAGTTCCTAGTAGTCCGAAAGTGTCAAAACCGTCAAAAACCACAGTTGAAGTTCCTCATACTCCAAAAGGCTTGAAACCATCAACCTCAGTCAACGTTCCTAGTACTCCGAAAGCAGCTGCAGCAGCATCTGAACCAGCCAGTAGCAACAGCCAATCTGAACCGGAGCCAATGCTGCTGATTGAACAAGCGCCAGCTTCAGTGGACGAGAATGGAAATCCTCCCCCTAAAGAGACCGTCATAGAAGAACCCACAAAAGTAATTCGCCCACGTTTGAGAAAAACCCGTTCAAGTGCTGCTGCTAACCGTTGAAAAGGGAATGGGAGCAATGTTTCTGAATCTCAGTTTCCCCTCTTAGAAAGCAGAATGGAACAATGAGTACTGATTTGCCGATCCCGGCATTCATGTAAATTTGTTGTTTCTATTCCAATTTTATTTTCTCTTTATTTTTCTGGACGGTGGCCGGTGGGGTGGTCTAGGGTTAGCATATGGTGCGGTTCTTGTCAAAATTCCATGGCATAATTTCAATGTTCGCATAAATCTTTACTTGGCTATAGTTGAATTCAGGACTTCCGTCGGAAATGCTTTTTGCACAACAGATGGTTTGGGTTAAATCTTTTCCTTCGATCAGTTAAATTGGATTCTATTGACAAG CCCTCCGGCTCCGTGATACCAGAAATGCAGAAATGACTAATTAGAGAGCCGTTTGATTCGAAATGAACGGTGATTAAGGGATGAAGTTTATACCATTATTGTCCTTGTGTACACACATTCCAAAGCGTCTTTCCATAATAATACGATTTTTATGGAAATCAAAGCGGGTTTTATTAGCGAAATGAAGTTCGCCGAACCAAATATCCGATTGGTGTAAGAATTTCAAACGCGCTCTCTCGCTGTCTCGCTCTCTCGCACTCGTCTCTCCATCTTTATCACTTCCTCTGCTTTTCCAACGGTCCGCCGAGGCATTTTGGCGGTGCCGATCGCTGATTTGTCTCTCCGCCGTCGATCTCCGACTCTCACTCTACGATTCTCCTCTATCCACTGCCTCGAGCCAGCTTTTGCAGACTTTTGATTTTTCTCGTATTCGTCGATTCTTTGATTTTGTCTCAAGGCATTCAAGATGATTGGCTCCTTTCTTACTAGAGGTCTCGTGATGATTTTTGGCTATGCTTATCCTGCATATGAGTGCTATAAAACTGTTGAAATGAACAAGCCAGAAATTGAGCAACTTCGCTTTTGGTGCCAATACTGGATTTTAGTGGCTGTTTTGACTGTTTGTGAGAGGATTGGAGATGCATTCATTTCATGGGTTCCTATGTATAGTGAAGCTAAATTGGCTTTCTACATATATCTCTGGTACCCCAAAACAAAAGGAACAACTTATGTATATGATTCCTTCTTTAGACCATATGTAGCAAAGCATGAGACAGATATTGACCAAAATTTATTGGAACTAAGGACCAGAGCGGGTGATATTGCTGTTATCTATTGGCAGAGAGCTGCAAGCTATGGCCAGACAAGGGTATACGAGATCTTGCAATATGTTGCTGCACAATCAACAGCTAAGCCTCACAAGACTCAGAAACAGCCCGCAGTAGCGAAGGCGAAGGTTTCACCAGACAATGTGACATCAAAAGGCACTGGTGCCACTACTAATCAAGTGCTAATTGATCCGTCGTCATCCCCATCTTCAAGTCAACAAAAAGATGTAGCTGAAGAGGTGGGTGTTTCACAAGTTTCAAAACTGAAAACCACATTTGAAGTTCCTAGTAGTCCGAAAGTGTCAAAACCGTCAAAAACCACAGTTGAAGTTCCTCATACTCCAAAAGGCTTGAAACCATCAACCTCAGTCAACGTTCCTAGTACTCCGAAAGCAGCTGCAGCAGCATCTGAACCAGCCAGTAGCAACAGCCAATCTGAACCGGAGCCAATGCTGCTGATTGAACAAGCGCCAGCTTCAGTGGACGAGAATGGAAATCCTCCCCCTAAAGAGACCGTCATAGAAGAACCCACAAAAGTAATTCGCCCACGTTTGAGAAAAACCCGTTCAAGTGCTGCTGCTAACCGTTGAAAAGGGAATGGGAGCAATGTTTCTGAATCTCAGTTTCCCCTCTTAGAAAGCAGAATGGAACAATGAGTACTGATTTGCCGATCCCGGCATTCATGTAAATTTGTTGTTTCTATTCCAATTTTATTTTCTCTTTATTTTTCTGGACGGTGGCCGGTGGGGTGGTCTAGGGTTAGCATATGGTGCGGTTCTTGTCAAAATTCCATGGCATAATTTCAATGTTCGCATAAATCTTTACTTGGCTATAGTTGAATTCAGGACTTCCGTCGGAAATGCTTTTTGCACAACAGATGGTTTGGGTTAAATCTTTTCCTTCGATCAGTTAAATTGGATTCTATTGACAAG ATGATTGGCTCCTTTCTTACTAGAGGTCTCGTGATGATTTTTGGCTATGCTTATCCTGCATATGAGTGCTATAAAACTGTTGAAATGAACAAGCCAGAAATTGAGCAACTTCGCTTTTGGTGCCAATACTGGATTTTAGTGGCTGTTTTGACTGTTTGTGAGAGGATTGGAGATGCATTCATTTCATGGGTTCCTATGTATAGTGAAGCTAAATTGGCTTTCTACATATATCTCTGGTACCCCAAAACAAAAGGAACAACTTATGTATATGATTCCTTCTTTAGACCATATGTAGCAAAGCATGAGACAGATATTGACCAAAATTTATTGGAACTAAGGACCAGAGCGGGTGATATTGCTGTTATCTATTGGCAGAGAGCTGCAAGCTATGGCCAGACAAGGGTATACGAGATCTTGCAATATGTTGCTGCACAATCAACAGCTAAGCCTCACAAGACTCAGAAACAGCCCGCAGTAGCGAAGGCGAAGGTTTCACCAGACAATGTGACATCAAAAGGCACTGGTGCCACTACTAATCAAGTGCTAATTGATCCGTCGTCATCCCCATCTTCAAGTCAACAAAAAGATGTAGCTGAAGAGGTGGGTGTTTCACAAGTTTCAAAACTGAAAACCACATTTGAAGTTCCTAGTAGTCCGAAAGTGTCAAAACCGTCAAAAACCACAGTTGAAGTTCCTCATACTCCAAAAGGCTTGAAACCATCAACCTCAGTCAACGTTCCTAGTACTCCGAAAGCAGCTGCAGCAGCATCTGAACCAGCCAGTAGCAACAGCCAATCTGAACCGGAGCCAATGCTGCTGATTGAACAAGCGCCAGCTTCAGTGGACGAGAATGGAAATCCTCCCCCTAAAGAGACCGTCATAGAAGAACCCACAAAAGTAATTCGCCCACGTTTGAGAAAAACCCGTTCAAGTGCTGCTGCTAACCGTTGA MIGSFLTRGLVMIFGYAYPAYECYKTVEMNKPEIEQLRFWCQYWILVAVLTVCERIGDAFISWVPMYSEAKLAFYIYLWYPKTKGTTYVYDSFFRPYVAKHETDIDQNLLELRTRAGDIAVIYWQRAASYGQTRVYEILQYVAAQSTAKPHKTQKQPAVAKAKVSPDNVTSKGTGATTNQVLIDPSSSPSSSQQKDVAEEVGVSQVSKLKTTFEVPSSPKVSKPSKTTVEVPHTPKGLKPSTSVNVPSTPKAAAAASEPASSNSQSEPEPMLLIEQAPASVDENGNPPPKETVIEEPTKVIRPRLRKTRSSAAANR Homology
BLAST of Cp4.1LG02g07890.1 vs. ExPASy Swiss-Prot
Match: Q8LE10 (HVA22-like protein i OS=Arabidopsis thaliana OX=3702 GN=HVA22I PE=2 SV=2) HSP 1 Score: 301.6 bits (771), Expect = 1.0e-80 Identity = 174/313 (55.59%), Postives = 206/313 (65.81%), Query Frame = 0
BLAST of Cp4.1LG02g07890.1 vs. ExPASy Swiss-Prot
Match: Q8LEM6 (HVA22-like protein h OS=Arabidopsis thaliana OX=3702 GN=HVA22H PE=2 SV=2) HSP 1 Score: 272.3 bits (695), Expect = 6.8e-72 Identity = 161/332 (48.49%), Postives = 207/332 (62.35%), Query Frame = 0
BLAST of Cp4.1LG02g07890.1 vs. ExPASy Swiss-Prot
Match: Q9LR09 (Putative HVA22-like protein g OS=Arabidopsis thaliana OX=3702 GN=HVA22G PE=3 SV=2) HSP 1 Score: 252.3 bits (643), Expect = 7.3e-66 Identity = 112/156 (71.79%), Postives = 140/156 (89.74%), Query Frame = 0
BLAST of Cp4.1LG02g07890.1 vs. ExPASy Swiss-Prot
Match: Q8GXE9 (HVA22-like protein j OS=Arabidopsis thaliana OX=3702 GN=HVA22J PE=2 SV=2) HSP 1 Score: 191.8 bits (486), Expect = 1.2e-47 Identity = 84/157 (53.50%), Postives = 116/157 (73.89%), Query Frame = 0
BLAST of Cp4.1LG02g07890.1 vs. ExPASy Swiss-Prot
Match: Q4KMI4 (Receptor expression-enhancing protein 2 OS=Danio rerio OX=7955 GN=reep2 PE=2 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 4.0e-16 Identity = 75/272 (27.57%), Postives = 121/272 (44.49%), Query Frame = 0
BLAST of Cp4.1LG02g07890.1 vs. NCBI nr
Match: XP_023525364.1 (HVA22-like protein i [Cucurbita pepo subsp. pepo]) HSP 1 Score: 605 bits (1560), Expect = 7.83e-218 Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 0
BLAST of Cp4.1LG02g07890.1 vs. NCBI nr
Match: XP_022940428.1 (HVA22-like protein i [Cucurbita moschata]) HSP 1 Score: 593 bits (1529), Expect = 4.15e-213 Identity = 310/316 (98.10%), Postives = 313/316 (99.05%), Query Frame = 0
BLAST of Cp4.1LG02g07890.1 vs. NCBI nr
Match: KAG6608591.1 (HVA22-like protein i, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 588 bits (1517), Expect = 3.02e-211 Identity = 307/314 (97.77%), Postives = 311/314 (99.04%), Query Frame = 0
BLAST of Cp4.1LG02g07890.1 vs. NCBI nr
Match: XP_022980901.1 (HVA22-like protein i [Cucurbita maxima]) HSP 1 Score: 580 bits (1495), Expect = 6.31e-208 Identity = 304/316 (96.20%), Postives = 306/316 (96.84%), Query Frame = 0
BLAST of Cp4.1LG02g07890.1 vs. NCBI nr
Match: KAG7037908.1 (HVA22-like protein i [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 557 bits (1436), Expect = 1.86e-198 Identity = 298/331 (90.03%), Postives = 301/331 (90.94%), Query Frame = 0
BLAST of Cp4.1LG02g07890.1 vs. ExPASy TrEMBL
Match: A0A6J1FP87 (HVA22-like protein OS=Cucurbita moschata OX=3662 GN=LOC111446041 PE=3 SV=1) HSP 1 Score: 593 bits (1529), Expect = 2.01e-213 Identity = 310/316 (98.10%), Postives = 313/316 (99.05%), Query Frame = 0
BLAST of Cp4.1LG02g07890.1 vs. ExPASy TrEMBL
Match: A0A6J1IUX0 (HVA22-like protein OS=Cucurbita maxima OX=3661 GN=LOC111480216 PE=3 SV=1) HSP 1 Score: 580 bits (1495), Expect = 3.06e-208 Identity = 304/316 (96.20%), Postives = 306/316 (96.84%), Query Frame = 0
BLAST of Cp4.1LG02g07890.1 vs. ExPASy TrEMBL
Match: A0A0A0LE74 (HVA22-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G872100 PE=3 SV=1) HSP 1 Score: 446 bits (1148), Expect = 3.38e-155 Identity = 248/333 (74.47%), Postives = 274/333 (82.28%), Query Frame = 0
BLAST of Cp4.1LG02g07890.1 vs. ExPASy TrEMBL
Match: A0A6J1CCZ7 (HVA22-like protein OS=Momordica charantia OX=3673 GN=LOC111010426 PE=3 SV=1) HSP 1 Score: 441 bits (1135), Expect = 1.88e-153 Identity = 242/314 (77.07%), Postives = 265/314 (84.39%), Query Frame = 0
BLAST of Cp4.1LG02g07890.1 vs. ExPASy TrEMBL
Match: A0A5A7V6Q5 (HVA22-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold205G001010 PE=3 SV=1) HSP 1 Score: 437 bits (1125), Expect = 9.93e-152 Identity = 249/334 (74.55%), Postives = 271/334 (81.14%), Query Frame = 0
BLAST of Cp4.1LG02g07890.1 vs. TAIR 10
Match: AT5G42560.1 (Abscisic acid-responsive (TB2/DP1, HVA22) family protein ) HSP 1 Score: 301.6 bits (771), Expect = 7.4e-82 Identity = 174/313 (55.59%), Postives = 206/313 (65.81%), Query Frame = 0
BLAST of Cp4.1LG02g07890.1 vs. TAIR 10
Match: AT5G42560.2 (Abscisic acid-responsive (TB2/DP1, HVA22) family protein ) HSP 1 Score: 281.2 bits (718), Expect = 1.0e-75 Identity = 163/302 (53.97%), Postives = 195/302 (64.57%), Query Frame = 0
BLAST of Cp4.1LG02g07890.1 vs. TAIR 10
Match: AT5G42560.3 (Abscisic acid-responsive (TB2/DP1, HVA22) family protein ) HSP 1 Score: 281.2 bits (718), Expect = 1.0e-75 Identity = 163/302 (53.97%), Postives = 195/302 (64.57%), Query Frame = 0
BLAST of Cp4.1LG02g07890.1 vs. TAIR 10
Match: AT1G19950.1 (HVA22-like protein H (ATHVA22H) ) HSP 1 Score: 272.3 bits (695), Expect = 4.8e-73 Identity = 161/332 (48.49%), Postives = 207/332 (62.35%), Query Frame = 0
BLAST of Cp4.1LG02g07890.1 vs. TAIR 10
Match: AT1G75700.1 (HVA22-like protein G ) HSP 1 Score: 252.3 bits (643), Expect = 5.2e-67 Identity = 112/156 (71.79%), Postives = 140/156 (89.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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